BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg337810 Length=492 Score E Sequences producing significant alignments: (Bits) Value AT1G56320.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 721 0.0 > AT1G56320.1 | Symbols: | BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:21085548-21086494 REVERSE LENGTH=701 Length=701 Score = 721 bits (390), Expect = 0.0 Identities = 460/494 (93%), Gaps = 4/494 (1%) Strand=Plus/Plus Query 1 ATGGATGTTCCAAAGGTTTCAAGACTTTGGCTACTCTATGCAGTGTTGCTCTTTCACAGT 60 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct 36 ATGAATGTTCCAAAGGTGTCAAGACTTTGGCTACTCTATGCAGTGTTGCTCTTTGATAGT 95 Query 61 CAGAGACATTCAGTAAATGCGCAGGCTGGTGGTGTGATCGGAGGTGCAGGGATTTTGGTT 120 ||||||||||||||||||||||||||||||||| | ||||| || || |||||||||||| Sbjct 96 CAGAGACATTCAGTAAATGCGCAGGCTGGTGGTATCATCGGGGGCGCGGGGATTTTGGTT 155 Query 121 CAGAGAGCCGCATTCTGTTTCAACAATAACCTGCTCTACAGAGGGTGCAATGAAGCGTTC 180 ||||||||||| |||||||| |||||||| |||||||||||||| || ||||| |||||| Sbjct 156 CAGAGAGCCGCGTTCTGTTTTAACAATAATCTGCTCTACAGAGGATGTAATGAGGCGTTC 215 Query 181 AGACTAAACCAA-AGAGGTGAATTCAAGGTTCCACCTGAGGAAACAGACAAG-TTCTGCA 238 |||||||||||| | |||||||||||||||||||||||||||||||||| || ||||||| Sbjct 216 AGACTAAACCAACA-AGGTGAATTCAAGGTTCCACCTGAGGAAACAGAC-AGATTCTGCA 273 Query 239 ACGGTCCTTGTTCTGCAGAAACAGAACTCGTGCTTACATGCATTAATAGCGTCATGTCTG 298 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 274 ACGGTCCTTGTTCTGCAGAAACAGAACTTGTGCTTACATGCATTAATAGTGTCATGTCTG 333 Query 299 ATTTCATATTTTACAACCGGGCTACCCCGAGAGATGTAAGGAACACCCTCCGTGGTGGCT 358 ||||| | |||||||| || |||||||||||||||||||||||| ||||||||||||||| Sbjct 334 ATTTCGTGTTTTACAATCGTGCTACCCCGAGAGATGTAAGGAACGCCCTCCGTGGTGGCT 393 Query 359 GCAGCTCCTCTTTCACACGAGGGAACTTCAATGTGGGAGACTATGCTCAAGGACTCTATT 418 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 394 GCAGCTCCTCTTTCACACGAGGAAACTTCAATGTGGGAGACTATGCTCAAGGACTCTATT 453 Query 419 TCGGCAAGGCCGGGAAAAAGCTGCCTGGGTTGTTCGTTGGACTAGTTGTCGGGTTTGTAC 478 |||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| Sbjct 454 TCGGCAAGGCAGGGAAAAAGCTGCCTGGACTGTTCATTGTACTAGTTCTCGGGTTTGTAC 513 Query 479 CATTGATCCTGTGA 492 || ||||||||||| Sbjct 514 CACTGATCCTGTGA 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23459346649 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5