BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg338015 Length=762 Score E Sequences producing significant alignments: (Bits) Value AT1G63560.1 | Symbols: | Receptor-like protein kinase-related ... 1040 0.0 AT1G63570.1 | Symbols: | Receptor-like protein kinase-related ... 217 2e-55 > AT1G63560.1 | Symbols: | Receptor-like protein kinase-related family protein | chr1:23573094-23574278 FORWARD LENGTH=1185 Length=1185 Score = 1040 bits (563), Expect = 0.0 Identities = 657/701 (94%), Gaps = 12/701 (2%) Strand=Plus/Plus Query 1 ATGTCCCAACCTCACCACAT-GCACACTTTCTGCGACGACCA-ATTATCCGACAACTTCA 58 |||||||||||||| ||||| || ||||||||||||||| || ||||||||||||||||| Sbjct 68 ATGTCCCAACCTCAACACATGGC-CACTTTCTGCGACGA-CAGATTATCCGACAACTTCA 125 Query 59 CACAAACCAGCTCATACAAATCAAACCGTGAAACCCTACTTTCTTCTCTCCGTGACCATT 118 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 126 CACAAACCAGCTCATACAAAGCAAACCGTGAAACCCTACTTTCTTCTCTCCGTGACCGTT 185 Query 119 CCTCCCTCGGAACCTATTCCAATGCCACAATCGGTCTTAGCCCCGACACAGTCTATGGCA 178 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 186 CCTCCCTTGGAACCTATTCCAATGCCACAATCGGTCTTAGCCCCGACACAGTCTATGGCA 245 Query 179 TGTTCCTCTGCCGAGGAGACCTCCCCAAAACATCTTGTTCGGACTGTGTCAAGACCGCAA 238 |||| |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct 246 TGTTTCTCTGCCGAGGAGACCTCACCAAAACATCATGTTCGGACTGTGTCAAAACCGCAA 305 Query 239 CCGTAGAAATCACTAAAAATAA---CTGCACTTCCAGAAAAACTGCTCTAATATACTACG 295 || ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 306 CCCTAGAAATCACTAAAAATAATAACTGCACTTCCAGAAAAACTGCTCTAATATTCTACG 365 Query 296 AGGAGTGTATGGTTCGTTACTCCAATGTGTCCTTCTTCACGCTCGTAGAA---GACGGGC 352 |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| Sbjct 366 AGGAGTGTATGGTTCGATACTCCAATGTTTCCTTCTTCACGCTCGTAGAACTAGACGGGC 425 Query 353 CTTACGCCGCTAGATACTCTGTCGCTTCGTTTCCTACTTCTATTTTTAGTTCGTTCCAAC 412 |||||| ||||| ||||||| |||| | |||||||||||| |||||||||| ||||||| Sbjct 426 CTTACGTCGCTAAATACTCTCTCGCCACTTTTCCTACTTCTCTTTTTAGTTCTTTCCAAC 485 Query 413 AAACGTTATCCAATAAGGTAGAGCAACTAATTATCCTCATAGGATCAAAGTCTTCTTTGT 472 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 486 AAACGTTATCCAATAAGGTAGAGCAACTAATTATCCTCATAGCATCAAAGTCTTCTTTGT 545 Query 473 CTGCTTCTACGCCTTATTACGAGAAGGATATATCACGTGTGAATGCATTAGAGGGCTCGT 532 ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| Sbjct 546 CTGCTTCTACGCCTTATTACGTGAAGGATATATCACGTGTAAATGAATTAGAGGGCTCGT 605 Query 533 ATACATTAGACACAGTGGTTCAGTGTAGTCCTGATCTTGATTCAGCAAATTGCGGCGTCT 592 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 606 ATACATTAGACACGGTGGTTCAGTGTAGTCCTGATCTTGATCCAGCAAATTGCGGCGTCT 665 Query 593 GTTTGAGACTTGTGGTCAATAG-TCTCTCAGGCTGTTGTACCAATGCTCGTTGGGGTCAG 651 ||||||||||||||||||| || ||||||||||||||||||||||||||||| | |||| Sbjct 666 GTTTGAGACTTGTGGTCAA-AGGTCTCTCAGGCTGTTGTACCAATGCTCGTTTTGCTCAG 724 Query 652 TTCAATCTTCCTAAATGTCTTTTGAAGTATGACACAACCGG 692 ||| ||||| |||||||| |||||||||||||||||||||| Sbjct 725 TTCTATCTTTCTAAATGTTTTTTGAAGTATGACACAACCGG 765 Score = 100 bits (54), Expect = 2e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 691 GGAAACGAAATGTTTAGGAGAATTTTCATTACAGCCTTGACAACTTCGGTGTTAGCACTT 750 ||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1046 GGAAACGAAATATTGAGGAGAATTTTCATCACAGCAATGACAACTTCGGTGTTAGCACTT 1105 Query 751 GTGGGTCTATGA 762 |||||||| ||| Sbjct 1106 GTGGGTCTGTGA 1117 > AT1G63570.1 | Symbols: | Receptor-like protein kinase-related family protein | chr1:23575450-23576304 FORWARD LENGTH=855 Length=855 Score = 217 bits (117), Expect = 2e-55 Identities = 271/341 (79%), Gaps = 28/341 (8%) Strand=Plus/Plus Query 1 ATGTCCCAACCTCACCACATGCACACTTTCTGCGACGACCAATTATCCGACAACTTCACA 60 |||||||||||||| |||||||||||||||||| | | | | ||||| ||||||| Sbjct 67 ATGTCCCAACCTCAACACATGCACACTTTCTGC-A-G--C----GT-CGACAGCTTCACA 117 Query 61 CAAACCAGCTCATAC-AAATCAAACCGTGAA-ACCCTACTTTCTTCTCTC--CGTGACCA 116 ||||||||||| ||| ||| ||||||| || | |||||| | ||||| | ||| | Sbjct 118 CAAACCAGCTCCTACGAAA-CAAACCG-CAACATCCTACTCACCACTCTCAGCTTGA-C- 173 Query 117 TTCCTCCCTCGGAAC-CTATTCCAATGCCACAATCGGTCTTAGCCCCGACACAGTCTATG 175 |||||| ||| | || ||||| || |||||||||||||| ||||||||||||||||||| Sbjct 174 TTCCTCGCTC-GTACACTATTTAAACGCCACAATCGGTCTCAGCCCCGACACAGTCTATG 232 Query 176 GCATGTTCCTCTGCCGAGGAGACCTCCCCAAAACATCTTGTTCGGACTGTGT-CAAGACC 234 ||||||||||||| |||||||| || || ||||||||| || |||||||| ||| ||| Sbjct 233 GCATGTTCCTCTGTAGAGGAGACATCAACACAACATCTTGCTCAGACTGTGTTCAA-ACC 291 Query 235 GCAACCGTAGAAATCACTAAAAATAACTGCACT-TCCAGAAAA-ACTGCTCTAATATACT 292 ||| | | || ||| ||| ||| ||| ||| | | |||| | ||| | ||||||| Sbjct 292 GCAGCAATCGAGATCGCTACAAA---CTGTACTCTTAACAAAAGA--GCTTTCATATACT 346 Query 293 ACGAGGAGTGTATGGTTCGTTACTCCAATGTGTCCTTCTTC 333 |||| |||||||||||||| ||||| ||||| ||||||||| Sbjct 347 ACGACGAGTGTATGGTTCGATACTCAAATGTTTCCTTCTTC 387 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37022566339 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5