BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg338247 Length=861 Score E Sequences producing significant alignments: (Bits) Value AT1G61230.1 | Symbols: | Mannose-binding lectin superfamily pr... 536 1e-151 > AT1G61230.1 | Symbols: | Mannose-binding lectin superfamily protein | chr1:22578951-22580781 FORWARD LENGTH=1518 Length=1518 Score = 536 bits (290), Expect = 1e-151 Identities = 353/383 (92%), Gaps = 5/383 (1%) Strand=Plus/Plus Query 382 AGAA-AGTTTGAGCTAGACTATCCAAATGAATTTATCACATCTGTGGATGGTACTTTCAA 440 |||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 804 AGAAGAGTTTGAGTTAAACTATCCCAATGAATTTATCACATCTGTGGATGGTACTTTCAA 863 Query 441 ATATTCTAGCATTAGGAAAGTGAACTGCGTTACGTCTTTGGTTTTCAAAACATCAAAAGG 500 | | ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 864 AAACTCTGGCATGAGGAAAGTGATGTGCGTTACGTCTTTGGTTTTCAAAACATCAAAAGG 923 Query 501 GAAAATCTCTCCGACATTTGGAAGCGTGACTGGGACTAAATTCGTGTTGGAGACCAAAGG 560 || ||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 924 GAGAATTTCTCCGACATATGGAAGCGTGACTGGGACTAAATTTGTGTTGGAGACCAAAGA 983 Query 561 TTGTGCTCTAGTTGGGTTCCATGGATGGACTTTTCTTCCTTATCTTACTGCTATTGGGGC 620 ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| || Sbjct 984 TTGTGCTCTAGCTGGGTTCCATGGATGGACTTTTCTTGGTTTTCTTACTGCTATTGGTGC 1043 Query 621 ATATTTTTCTCCT-CTGCCTCT-TCCTCCTACTGCGGAGAAACTAGAATCACAAGGTTAT 678 |||||||||| || |||||| | |||||||| |||||||||||||||| ||| ||||||| Sbjct 1044 ATATTTTTCT-CTGCTGCCT-TGTCCTCCTAATGCGGAGAAACTAGAAGCACGAGGTTAT 1101 Query 679 GACCGAGGAGCTTTTTGGGATGATGGTGTTTACGATGGTGTTAGAAAGATATATGTAGGA 738 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1102 GATCGAGGAGCTTTTTGGGATGATGGTGTTTACGATGGTGTTAGAAAGATATATGTAGGA 1161 Query 739 CAACGTGAAAATGGTATAGCATT 761 ||| ||||||||||||| ||||| Sbjct 1162 CAATGTGAAAATGGTATCGCATT 1184 Score = 448 bits (242), Expect = 6e-125 Identities = 332/372 (89%), Gaps = 20/372 (5%) Strand=Plus/Plus Query 23 TAAGAGGTGGTTTTGAAGGCATTCAATACATCAAGTTCGATTATGTCAAGAGTGGACAAC 82 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 341 TAAGAGGTGGTTTTGAAGGCATTCAATACATCAAGTTCGACTATGTCAAGAGTGGACAGC 400 Query 83 CTAAAATTGGCTCAGTCCACGGTCTCTCGGGTAGAGGTTTCT-CGCA-GGCGAGGGTTAC 140 |||||||||||||||||||||||||||| || || |||| || | | | ||| | | | Sbjct 401 CTAAAATTGGCTCAGTCCACGGTCTCTC-GG-AG-GGTTACTATG-ATGACGA--G-T-C 452 Query 141 TACGACGACGAGTCTAG-AGC--C-ATTCAAAACTAACAGAAAGACTTCTGAGCTGCTGG 196 ||| | | | | || || | | | |||||||||||||| |||||||||||||||||| | Sbjct 453 TAC-A-G-CCATTCAAGCA-CTTCAATTCAAAACTAACATAAAGACTTCTGAGCTGCTAG 508 Query 197 GATATGAAAAGGATAAGAAGTTTTCACTTGCACACAAGGGAAGGAAAATCATTGGATTTC 256 |||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||| |||| Sbjct 509 GATATGAAAAGGGTAAGAAGTTTTCACTTGCAGACAAGGGAAAGAAAATTATTGGGTTTC 568 Query 257 ATGGATATGCTGAGAAGAACCTCATTTCTCTTGGAGCATATTCCACAACAGTTTCTGTTA 316 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 569 ATGGATATGCTGAGAAGAACCTCATTTCTCTTGGAGCATATTTCACAACAGTTTCTGTTA 628 Query 317 GTAAATCGGTATGTCACGGTAGTAA-ATTAAACGAGTATTGGGATGATGGTGTTTTCGAC 375 |||||||||||||||||||||||| || || ||||| |||||||||||||||||| ||| Sbjct 629 CTAAATCGGTATGTCACGGTAGTAAGAT-AATCGAGTCTTGGGATGATGGTGTTTTTGAC 687 Query 376 GGCATAAGAAAG 387 |||||||||||| Sbjct 688 GGCATAAGAAAG 699 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41995746892 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5