BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg338322
Length=1905
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family... 1722 0.0
AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr... 1299 0.0
AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156 FO... 1286 0.0
AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr... 843 0.0
AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-... 773 0.0
AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220 RE... 604 7e-172
AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305 RE... 420 3e-116
> AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family
| chr1:22302486-22304985 REVERSE LENGTH=2031
Length=2031
Score = 1722 bits (932), Expect = 0.0
Identities = 1324/1514 (87%), Gaps = 23/1514 (2%)
Strand=Plus/Plus
Query 16 AAGCATGTTGTCACTAG-AGCCTCTCCTTCTCTTGCTATTGTTGAGGTGAAGCCTCATGA 74
||||||| ||||||||| | || |||||||||| || ||||| ||| ||| |||||
Sbjct 16 AAGCATGATGTCACTAGTA-CCACTCCTTCTCTGGCAATTGTCCAGGCGAATCCTCACCC 74
Query 75 CCACAAAGATGCTGTTCCTATTGAAGCACCGATTGTATCTTCTTACAATGATCAGATCAG 134
||||||||||| |||||| | |||||||| |||||||| ||||||||||| || |||||
Sbjct 75 CCACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTACAATGACCACATCAG 134
Query 135 GCCACTGCTTGACACTGTGGACAGGCTAAGGAACCTGAATGTGATG-AGAGAAGGGATCC 193
||| |||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| |
Sbjct 135 GCCGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTC 193
Query 194 AGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCGTCGGGGAAGTCAAGTGTTCTTGAGT 253
||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct 194 AGCTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGT 253
Query 254 CCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCA 313
| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 254 CGTTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCA 313
Query 314 TGAGGCTCCAGCGAAGCTC-TAGCCCTGAACCTGAAATCTGGCTGGAGTATAATGACAAA 372
||||||||||| |||| || |||||||||||||| |||||||||||||| |||||||
Sbjct 314 TGAGGCTCCAGAGAAG-TCGAAGCCCTGAACCTGAGATCTGGCTGGAGTACGGTGACAAA 372
Query 373 GTTGTTCAGACGGATGAGGAACACATAGCT-AATGCTATATGTG-ATGCGACTGATGTGA 430
|||||| || |||||||||||||| ||| || |||| |||| | || || || ||||
Sbjct 373 ATTGTTCCTACAGATGAGGAACACATTGCTCAA-ACTATTTGTGCA-GCTACAGACGTGA 430
Query 431 TTGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAAGGCTG 490
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 431 TAGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAAGGCTG 490
Query 491 GTGTTCCAGATATTACCATGGTTGATCTCCCTGGGATAACCCGGGTTCCTGTGAACGGAC 550
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 491 GTGTTCCAGATATTACTATGGTTGATCTCCCTGGAATAACCCGTGTTCCTGTGAACGGAC 550
Query 551 AGCCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATGAAGTACATCGAGCCACAGG 610
|||||||||| || ||||||||||||||| |||||||||||||||| || |||||||| |
Sbjct 551 AGCCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAGCCACAAG 610
Query 611 AATCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTCCAT-A 669
|||| ||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| |
Sbjct 611 AATCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAATCCATCA 670
Query 670 CGTATGTCTAAGCAAGTTGATAAAACAGGCGAACGAACTCTGGCTGTTGTCACCAAGGCA 729
| |||||||| || || || ||||| || || || ||||||||||| ||||| |||||
Sbjct 671 -GAATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCACAAAGGCT 729
Query 730 GACATGGCTCCTGAAGGGCTCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTGGACTT 789
|||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 730 GACATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTT 789
Query 790 GGTTATGTCTGTGTCAGAAACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAATGCAA 849
|||||||||||||| |||||||| || || || || || |||||||||||||||||||||
Sbjct 790 GGTTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAATGCAA 849
Query 850 GAAGAGTTACTTTTTAGGAATCATCCAATGCTAAGCT-TGATCGATGATGACATTGTGGG 908
|||||||||||||| |||| || || ||||| | ||||| ||||||| ||||||||
Sbjct 850 GAAGAGTTACTTTTCAGGACCCACCCGATGCTTT-CAATGATCAATGATGAGATTGTGGG 908
Query 909 CATCCCTGTATTAGCTCACAAGTTGACGCAGATCCAGGGAATGATGATATCCCGATGTTT 968
||||| || |||||||| ||| |||||||||||||||||||||||||||| | |||||
Sbjct 909 TATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATGATGATATCTAGGTGTTT 968
Query 969 GCCTGAAATCGAAAGGAAAATCAACGAGAAAATGGAGATCAGTGTCCTCGAGTTTAATAA 1028
||| |||||||||||||| || || | ||| ||||| ||||||||||| |||||||| ||
Sbjct 969 GCCGGAAATCGAAAGGAAGATAAATGTGAAGATGGAAATCAGTGTCCTGGAGTTTAACAA 1028
Query 1029 GCTTCCAATAGTGATGGCTTCAACTGGGGAAGCATTGATGGCTCTAATGGATGTCATTGG 1088
||| |||||||| |||||||| |||||||||||||| ||| ||||||||||| |||||||
Sbjct 1029 GCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTCTCTAATGGATATCATTGG 1088
Query 1089 TTCCGCCAAAGAGTCTCT-CTTAAGAATTCTCGTCCAAGGAGATTTCTCTGAATACCCCG 1147
||| ||||| |||||||| || |||||| || ||||| ||||||||||||||||||||
Sbjct 1089 TTCTGCCAAGGAGTCTCTACT-AAGAATCCTTGTCCATGGAGATTTCTCTGAATACCCTA 1147
Query 1148 ATGATCAAAACATGCATTGTACTGCCCGCTTGGCTGAAATGTTGAACGGGTTCTCAGATA 1207
| |||||||| |||||||| || || ||||||||||||||||| ||| | |||||||| |
Sbjct 1148 ACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACCGATTCTCAGACA 1207
Query 1208 ATCTGCAAGCACAATCTCAGGTCGCTT-CAGA-G--TTCTTGATGGACGAAATTAAAATT 1263
||||||| ||||| |||| | || | |||| | ||||||||||| ||||| ||| |
Sbjct 1208 ATCTGCAGGCACAGCCTCAAGCCG-TGACAGAAGAGTTCTTGATGGATGAAATCAAAGTC 1266
Query 1264 TTAGAAGAGTGCAAATGTATCGGATTGCCTAATTTTATCCCCAGATCTTCTTTCTTAGCT 1323
||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1267 TTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTTTCTTAGCA 1326
Query 1324 ATCCTTTCACAACATGTGGATGGAATTCATGCCAAGCCGGTTGAGTTCATCAAAGAGATA 1383
||||||||||||||||||||||| || || | |||||| |||||||||||||| ||||||
Sbjct 1327 ATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGTTCATCAAGGAGATA 1386
Query 1384 TGGGACTACATTGAAGTTGTTCTCTCGTCTGTCATTACCA-AGTATTCTGACAACTTTCC 1442
||||||||||||||||| ||||| || || |||||||| | | |||||||||||||||||
Sbjct 1387 TGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACA-TATTCTGACAACTTTCC 1445
Query 1443 ACAGATCCAATCCTCCATCAAAAGGGCTGGTTGTAATCTAATGAGCAAGACTAAGGAACG 1502
||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1446 CCAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAGCAGGACTAAGGAACG 1505
Query 1503 TTCAGTGAACAGAG 1516
||| |||||| |||
Sbjct 1506 TTCCGTGAACTGAG 1519
Score = 468 bits (253), Expect = 1e-130
Identities = 342/386 (89%), Gaps = 2/386 (1%)
Strand=Plus/Plus
Query 1519 AAACCTGACTACTTCT-CTTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGACA 1577
|||||||| | || | ||||| ||||||| ||| ||||||||||||||||||| ||| |
Sbjct 1645 AAACCTGA-GAATTTTGCTTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAA 1703
Query 1578 TTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCGTACTG 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1704 GTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACTG 1763
Query 1638 GACAATCGTCCTGCGAAGGATTGTGGATAATCTTGCTCTGTTTCTTCAGTTTTCTGTGAA 1697
||| ||||| |||||||| |||| ||||| |||||||| | ||||| || ||||||||
Sbjct 1764 GACGATCGTATTGCGAAGGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAA 1823
Query 1698 GAATCTGGTCAATAGTCAGTTTCAGAAGGAGATAGTTGCGGAAATGGTGGATACAAGAGC 1757
|||||||||||| |||||||||||||||||||| || ||||| ||||||||| |||||||
Sbjct 1824 GAATCTGGTCAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGC 1883
Query 1758 TGGCGGAGGAATTGAGAGGATGCTGGAGGAGTCTCCGTTGGTTGCGAGCAAGAGGGAGAA 1817
|||||||||||| || |||||||||||||| || |||| ||| |||||||||||||||||
Sbjct 1884 TGGCGGAGGAATAGATAGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAA 1943
Query 1818 GCTGAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGACGTTGTGGCGGCGATCGTTGA 1877
||||||||| ||| |||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1944 GCTGAAGAATAGTCTCAAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGA 2003
Query 1878 TCAGAATTCTGGGTACGGAGATCGTT 1903
|||||| |||| |||| |||||||
Sbjct 2004 TCAGAACTCTGTATACGCTGATCGTT 2029
> AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293964
FORWARD LENGTH=2152
Length=2152
Score = 1299 bits (703), Expect = 0.0
Identities = 1190/1424 (84%), Gaps = 38/1424 (3%)
Strand=Plus/Plus
Query 77 ACAAAGATGCTGTTCCTATTGAAGCACCGATTGTATCTTCTTACAATGATCAGATCAGGC 136
||||||||| |||| || |||||||||||||| ||||||| || || |||| ||| ||||
Sbjct 74 ACAAAGATGTTGTTTCTGTTGAAGCACCGATTATATCTTCATATAACGATCGGATAAGGC 133
Query 137 CACTGCTTGACACTGTGGACAGGCTAAGGAACCTGAATGTGATGAGAGAAGGGATCCAGC 196
| ||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| |
Sbjct 134 CGTTGCTTGACACTGTGGACAGACTTAGGAACCTCAATGTCATGAGAGAAGGGATCCATC 193
Query 197 TTCCCACCATTGTTGTGGTTGGAGACCAGTCGTCGGGGAAGTCAAGTGTTCTTGAGTCCT 256
||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct 194 TTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCAGGGAAGTCAAGTGTTCTTGAATCCT 253
Query 257 TGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATGA 316
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 254 TGGCAGGAATCAGTTTACCTCGTGGCCAAGGAATCTGCACTAGGGTTCCTCTTGTCATGA 313
Query 317 GGCTCCAGCGAAGCTCTAGCCCTGAACCTGAAATCTGGCTGGAGTATAATGACAAAGTTG 376
|||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| |
Sbjct 314 GGCTTCAGCGAAGCTCTAGCCCTGAACCTGAGATTTGGCTTGAGTATAACGACAAAGTGG 373
Query 377 TTCAGACGGATGAGGAACACATAGCT-AATGCTATAT-GTGATGCGACTGATGTGATTGC 434
||| ||||| ||||||||||| ||| || ||||| | ||| ||| || |||||||||||
Sbjct 374 TTCCTACGGACGAGGAACACATCGCTGAA-GCTAT-TCGTGCTGCAACAGATGTGATTGC 431
Query 435 TGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGAAGGCTGGTG 493
||||||||| |||||||| ||||| | || || || ||||||||||||||||||||||
Sbjct 432 TGGATCTGGTAAAGGGGTCTCAGATGCTCCA-TTGACCCTCCATGTGAAGAAGGCTGGTG 490
Query 494 TTCCAGATATTACCATGGTTGATCT-CCCTGGGATAACCCGGGTTCCTGTGAACGGACAG 552
||||||| |||| ||||| ||||| ||| || ||||| || ||||| ||||| ||||||
Sbjct 491 TTCCAGACCTTACGATGGTCGATCTTCCC-GGTATAACTCGAGTTCCAGTGAATGGACAG 549
Query 553 CCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATGAAGTACATCGAGCCACAGGAA 612
|| ||||| || ||||| ||||| || |||||| ||||| ||||||| ||||| || |||
Sbjct 550 CCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAAGAA 609
Query 613 TCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTCCATACGT 672
|| || |||||||||||||||||||| || || || || || || || || ||||| ||
Sbjct 610 TCAATAATCCTCAATGTTCTGTCAGCTACGGTCGACTTCACCACATGCGAATCCATTCGC 669
Query 673 ATGTCTAAGCAA-GTTGATAAAACAGG-CGAACGAACTCTGGCTGTTGTCACCAAGGCAG 730
||||||| | || ||||| ||||| || | |||| || || |||||||| || |||||||
Sbjct 670 ATGTCTA-GAAAAGTTGACAAAACCGGTC-AACGGACACTAGCTGTTGTGACAAAGGCAG 727
Query 731 ACATGGCTCCTGAAGGGCTCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTGGACTTG 790
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 728 ACATGGCTCCTGAAGGTCTCTTGCAGAAAGTAACTGCAGATGATGTGAGTATTGTTCTTG 787
Query 791 GTTATGTCTGTGTCAGAAACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAATGCAAG 850
|||| || || ||||||||||| || ||||||||||| ||||||||||| | |||||||
Sbjct 788 GTTACGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCAAGGATGCAAG 847
Query 851 AAGAGTTACTTTTTAGGAATCATCCAATGCTAAGCTTGATCGATGATGACATTGTGGGCA 910
||||||||||||| |||| |||||| ||||||| || || ||||| ||||| ||||| |
Sbjct 848 AAGAGTTACTTTTCAGGACCCATCCAGTGCTAAGTTTAATTGATGAAGACATAGTGGGAA 907
Query 911 TCCCTGTATTAGCTCACAAGTTGACGCAGATCCAGGGAATG-ATGATATCCC-GATGTTT 968
||||||| |||||||| ||| | | || ||||| || | ||||| | | |||||||
Sbjct 908 TCCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAATCAA-GCATGAT-TGCTAGATGTTT 965
Query 969 GCCTGAAATCGAAAGGAAAATCAACGAGAAAATGGAGATCAG-TGTCCTCGAGTTTAATA 1027
|||| |||| | ||| || |||||| |||| |||| | | | ||| || ||||| || |
Sbjct 966 GCCTAAAATTGTAAGCAAGATCAACCAGAAGTTGGACA-CTGCTGTTCTAGAGTTGAACA 1024
Query 1028 AGCTTCCAATAGTGATGGCTTCAACTGGGGAAGCATTGATGGC-TCTAATGGATGTCATT 1086
| || ||||| || |||||||| || ||||||||||||||||| | | ||||| |||||
Sbjct 1025 AACTGCCAATGGTAATGGCTTCTACCGGGGAAGCATTGATGGCAT-TGATGGACATCATT 1083
Query 1087 GGTTCCGCCAAAGAGTCTCTCTTAAGAATTCTCGTCCAAGGAGATTTCTCTGAATACCCC 1146
||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 1084 GGTTCTGCCAAAGAGTCCCTCTTAAGGATTCTAGTCCAAGGAGACTTCTCTGAATACCCA 1143
Query 1147 GATGATCAAAACATGCATTGTACTGCCCGCTTGGCTGAAATGTTGAA-CGGGTTCTCAGA 1205
|||||||| ||||||||||||||||| ||||||||||| ||||| || | ||||| ||
Sbjct 1144 GATGATCAGAACATGCATTGTACTGCTCGCTTGGCTGATATGTT-AAGCCAATTCTCTGA 1202
Query 1206 TAATCTGCAAGCACAATCTCA---G--GTCGCTTCAGAGTTCTTGATGGACGAAATTAAA 1260
|| |||||||||| || | || | || || | |||||||||||||| || || ||
Sbjct 1203 TAGTCTGCAAGCA-AAGC-CAAAAGAAGTGGC--C-GAGTTCTTGATGGATGAGATCAAG 1257
Query 1261 ATT-TTAGAAGAGTGCAAATGTATCGGATTGCCTAATTTTATCCCCAGATCTTCTTTCTT 1319
|| || || || ||||| ||| | ||| |||| ||||| |||||||| || | |||||
Sbjct 1258 ATCCTT-GACGAATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCAGGTCAGCCTTCTT 1316
Query 1320 AGCTATCCTTTCACAACATGTGGATGGAATTCATGCCAAGCCGGTTGAGTTCATCAA-AG 1378
||||| |||||||||||||| ||||| || || | |||||| |||||||||||||| |
Sbjct 1317 GGCTATACTTTCACAACATGTTGATGGTATACAAGACAAGCCAGTTGAGTTCATCAACA- 1375
Query 1379 AGATATGGGACTACATTGAAGTTGTTCTCTCGTCTGTCATTACCAAGTATTCTGACAACT 1438
||||||||||||||||||||| ||||||||| || |||| | | ||| ||||||||| |
Sbjct 1376 AGATATGGGACTACATTGAAGATGTTCTCTCATCCGTCACTGCTAAGCGTTCTGACAA-T 1434
Query 1439 TTCC-ACAGATCCAATCCTCCATCAAAAGGGCTGGTTGTAATCT 1481
|||| |||||| ||||| ||||||||| | || ||| |||||||
Sbjct 1435 TTCCCACAGATTCAATCTTCCATCAAACGAGCCGGTCGTAATCT 1478
> AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156
FORWARD LENGTH=2305
Length=2305
Score = 1286 bits (696), Expect = 0.0
Identities = 967/1099 (88%), Gaps = 14/1099 (1%)
Strand=Plus/Minus
Query 426 TGTGATTGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAA 485
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1599 TGTG-TTGCAGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAA 1541
Query 486 GGCTGGTGTTCCAGATATTACCATGGTTGATCTCCCTGGGATAACCCGGGTTCCTGTGAA 545
||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 1540 GGCTGGTGTTCCAGATATTACTATGGTTGATCTCCCTGGAATAACCCGTGTTCCTGTGAA 1481
Query 546 CGGACAGCCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATGAAGTACATCGAGCC 605
||||||||||||||| || ||||||||||||||| |||||||||||||||| || |||||
Sbjct 1480 CGGACAGCCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAGCC 1421
Query 606 ACAGGAATCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTC 665
||| ||||| ||||| ||||||||||||||||| ||||||||||| || |||||||| ||
Sbjct 1420 ACAAGAATCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAATC 1361
Query 666 CAT-ACGTATGTCTAAGCAAGTTGATAAAACAGGCGAACGAACTCTGGCTGTTGTCACCA 724
||| | | |||||||| || || || ||||| || || || ||||||||||| ||||| |
Sbjct 1360 CATCA-GAATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCACAA 1302
Query 725 AGGCAGACATGGCTCCTGAAGGGCTCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTG 784
|||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 1301 AGGCTGACATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCG 1242
Query 785 GACTTGGTTATGTCTGTGTCAGAAACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAA 844
||||||||||||||||||| |||||||| || || || || || ||||||||||||||||
Sbjct 1241 GACTTGGTTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAA 1182
Query 845 TGCAAGAAGAGTTACTTTTTAGGAATCATCCAATGCTAAGCT-TGATCGATGATGACATT 903
||||||||||||||||||| |||| || || ||||| | ||||| ||||||| |||
Sbjct 1181 TGCAAGAAGAGTTACTTTTCAGGACCCACCCGATGCTTT-CAATGATCAATGATGAGATT 1123
Query 904 GTGGGCATCCCTGTATTAGCTCACAAGTTGACGCAGATCCAGGGAATGATGATATCCCGA 963
||||| ||||| || |||||||| ||| |||||||||||||||||||||||||||| |
Sbjct 1122 GTGGGTATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATGATGATATCTAGG 1063
Query 964 TGTTTGCCTGAAATCGAAAGGAAAATCAACGAGAAAATGGAGATCAGTGTCCTCGAGTTT 1023
|||||||| |||||||||||||| || || | ||| ||||| ||||||||||| ||||||
Sbjct 1062 TGTTTGCCGGAAATCGAAAGGAAGATAAATGTGAAGATGGAAATCAGTGTCCTGGAGTTT 1003
Query 1024 AATAAGCTTCCAATAGTGATGGCTTCAACTGGGGAAGCATTGATGGCTCTAATGGATGTC 1083
|| ||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||| ||
Sbjct 1002 AACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTCTCTAATGGATATC 943
Query 1084 ATTGGTTCCGCCAAAGAGTCTCT-CTTAAGAATTCTCGTCCAAGGAGATTTCTCTGAATA 1142
|||||||| ||||| |||||||| || |||||| || ||||| |||||||||||||||||
Sbjct 942 ATTGGTTCTGCCAAGGAGTCTCTACT-AAGAATCCTTGTCCATGGAGATTTCTCTGAATA 884
Query 1143 CCCCGATGATCAAAACATGCATTGTACTGCCCGCTTGGCTGAAATGTTGAACGGGTTCTC 1202
||| | |||||||| |||||||| || || ||||||||||||||||| ||| | |||||
Sbjct 883 CCCTAACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACCGATTCTC 824
Query 1203 AGATAATCTGCAAGCACAATCTCAGGTCGCTT-CAGA-G--TTCTTGATGGACGAAATTA 1258
||| |||||||| ||||| |||| | || | |||| | ||||||||||| ||||| |
Sbjct 823 AGACAATCTGCAGGCACAGCCTCAAGCCG-TGACAGAAGAGTTCTTGATGGATGAAATCA 765
Query 1259 AAATTTTAGAAGAGTGCAAATGTATCGGATTGCCTAATTTTATCCCCAGATCTTCTTTCT 1318
|| | ||||||||| |||||||||||||||||||||||||||| || |||||||||||||
Sbjct 764 AAGTCTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTTTCT 705
Query 1319 TAGCTATCCTTTCACAACATGTGGATGGAATTCATGCCAAGCCGGTTGAGTTCATCAAAG 1378
|||| ||||||||||||||||||||||| || || | |||||| |||||||||||||| |
Sbjct 704 TAGCAATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGTTCATCAAGG 645
Query 1379 AGATATGGGACTACATTGAAGTTGTTCTCTCGTCTGTCATTACCA-AGTATTCTGACAAC 1437
|||||||||||||||||||||| ||||| || || |||||||| | | ||||||||||||
Sbjct 644 AGATATGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACA-TATTCTGACAAC 586
Query 1438 TTTCCACAGATCCAATCCTCCATCAAAAGGGCTGGTTGTAATCTAATGAGCAAGACTAAG 1497
||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 585 TTTCCCCAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAGCAGGACTAAG 526
Query 1498 GAACGTTCAGTGAACAGAG 1516
|||||||| |||||| |||
Sbjct 525 GAACGTTCCGTGAACTGAG 507
Score = 462 bits (250), Expect = 5e-129
Identities = 331/371 (89%), Gaps = 2/371 (1%)
Strand=Plus/Minus
Query 1519 AAACCTGACTACTTCT-CTTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGACA 1577
|||||||| | || | ||||| ||||||| ||| ||||||||||||||||||| ||| |
Sbjct 381 AAACCTGA-GAATTTTGCTTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAA 323
Query 1578 TTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCGTACTG 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 322 GTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACTG 263
Query 1638 GACAATCGTCCTGCGAAGGATTGTGGATAATCTTGCTCTGTTTCTTCAGTTTTCTGTGAA 1697
||| ||||| |||||||| |||| ||||| |||||||| | ||||| || ||||||||
Sbjct 262 GACGATCGTATTGCGAAGGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAA 203
Query 1698 GAATCTGGTCAATAGTCAGTTTCAGAAGGAGATAGTTGCGGAAATGGTGGATACAAGAGC 1757
|||||||||||| |||||||||||||||||||| || ||||| ||||||||| |||||||
Sbjct 202 GAATCTGGTCAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGC 143
Query 1758 TGGCGGAGGAATTGAGAGGATGCTGGAGGAGTCTCCGTTGGTTGCGAGCAAGAGGGAGAA 1817
|||||||||||| || |||||||||||||| || |||| ||| |||||||||||||||||
Sbjct 142 TGGCGGAGGAATAGATAGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAA 83
Query 1818 GCTGAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGACGTTGTGGCGGCGATCGTTGA 1877
||||||||| ||| |||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 82 GCTGAAGAATAGTCTCAAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGA 23
Query 1878 TCAGAATTCTG 1888
|||||| ||||
Sbjct 22 TCAGAACTCTG 12
> AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr1:22299797-22301167
FORWARD LENGTH=906
Length=906
Score = 843 bits (456), Expect = 0.0
Identities = 703/824 (85%), Gaps = 10/824 (1%)
Strand=Plus/Plus
Query 94 ATTGAAGCACCGATTGTATCTTCTTACAATGATCAGATCAGGCCACTGCTTGACACTGTG 153
||||||||||| |||||||| ||||||||||| | |||| ||||| |||||||||||||
Sbjct 82 ATTGAAGCACCAATTGTATCATCTTACAATGACCGGATCCGGCCATTGCTTGACACTGTC 141
Query 154 GACAGGCTAAGGAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTG 213
||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 142 GACAGATTGAGAAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTGGTG 201
Query 214 GTTGGAGACCAGTCGTCGGGGAAGTCAAGTGTTCTTGAGTCCTTGGCAGGAATCAGTTTG 273
|||||||||||||| || |||||||| |||||||||||||| ||||||||||||| ||||
Sbjct 202 GTTGGAGACCAGTCTTCAGGGAAGTCGAGTGTTCTTGAGTCGTTGGCAGGAATCAATTTG 261
Query 274 CCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATGAGGCTCCAGCGAAGCTCT 333
|||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 262 CCTCGTGGACAAGGAATCTGCACTAGGGTTCCTCTAGTCATGAGGCTTCAGCGAAGCTCC 321
Query 334 AGCCCTGAACCTGAAATCTGGCTGGAGTATAATGACAAAGTTGTTCAGACGGATGAGGAA 393
||||||||||| || || |||||||| || | |||||||||||||| || ||||| |||
Sbjct 322 AGCCCTGAACCAGAGATTTGGCTGGAATACAGTGACAAAGTTGTTCCCACAGATGAAGAA 381
Query 394 CACATAGCT-AATGCTATATGTGATGCGACTGATGTGATTGCTGGATCTGGCAAAGGGGT 452
||| | ||| || ||||| |||| ||| || ||||||||||||||| |||| |||| ||
Sbjct 382 CACGTCGCTGAA-GCTATTTGTGCTGCAACAGATGTGATTGCTGGAACTGGTGAAGGAGT 440
Query 453 TTCAGACACACCCCTTACGCTCCA-TGTGAAGAAGG-CTGGTGTTCCAGATATTACCATG 510
||||||||| ||||| || ||| | ||| |||||| | ||| |||||| |||| |||
Sbjct 441 TTCAGACACTCCCCTGACCCTC-AGTGTTAAGAAGAACAA-TGTCCCAGATCTTACGATG 498
Query 511 GTTGATCT-CCCTGGGATAACCCGGGTTCCTGTGAACGGACAGCCTGAAAACATCTATGA 569
|| ||||| ||| || ||||| || ||||| ||||| ||||| || || || || || ||
Sbjct 499 GTCGATCTTCCC-GGTATAACTCGAGTTCCAGTGAATGGACAACCGGAGAATATTTACGA 557
Query 570 ACAGATTTCCGGGATGGTTATGAAGTACATCGAGCCACAGGAATCCATCATCCTCAATGT 629
||||||||| ||||| | ||||||||||||||||| || ||||| || |||||||||||
Sbjct 558 ACAGATTTCTAGGATGATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAATGT 617
Query 630 TCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTCCATACGTATGTCTAAG-CAAGTTG 688
||||||||| || || || || || || || || ||||| || ||||| ||| |||||||
Sbjct 618 TCTGTCAGCTACGGTCGACTTCACCACATGCGAATCCATTCGCATGTC-AAGACAAGTTG 676
Query 689 ATAAAACAGGCGAACGAACTCTGGCTGTTGTCACCAAGGCAGACATGGCTCCTGAAGGGC 748
| ||||| || ||||| |||||||||||||| || ||||| ||||||||||||||||| |
Sbjct 677 ACAAAACTGGTGAACGGACTCTGGCTGTTGTGACAAAGGCTGACATGGCTCCTGAAGGTC 736
Query 749 TCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTGGACTTGGTTATGTCTGTGTCAGAA 808
|||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||
Sbjct 737 TCCTGCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTAGGTTACATCTGTGTTAGAA 796
Query 809 ACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAATGCAAGAAGAGTTACTTTTTAGGA 868
|||| || ||||||||||| |||||||||||| | |||| ||||| ||||| || ||||
Sbjct 797 ACCGTATAGGAGAAGAGACATATGAAGAAGCTAGGGTGCAGGAAGATTTACTCTTCAGGA 856
Query 869 ATCATCCAATGCTAAGCTTGATCGATGATGACATTGTGGGCATC 912
||||||| ||||||| ||||| |||| ||||||||| ||||||
Sbjct 857 CTCATCCACTGCTAAGTTTGATTGATGGTGACATTGTCGGCATC 900
> AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-induced
GTP-binding protein mx, blastp match of 42% identity
and 8.3e-35 P-value to GP|1399454|gb|AAC60215.1||U47946 RBTMx3
{Oncorhynchus mykiss} | chr1:22294722-22297139 FORWARD
LENGTH=2418
Length=2418
Score = 773 bits (418), Expect = 0.0
Identities = 871/1084 (80%), Gaps = 53/1084 (5%)
Strand=Plus/Plus
Query 432 TGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGAAGGCTG 490
||| ||||||||||||||||| |||||| | || || || |||||||| ||||||||||
Sbjct 919 TGCAGGATCTGGCAAAGGGGTCTCAGACGC-TCCATTGACCCTCCATGTTAAGAAGGCTG 977
Query 491 GTGTTCCAGATATTACCATGGTTGATC-TCCCTGGGATAACCCG-GGTTCCTGTGAACGG 548
| || ||| || |||||||||| |||| |||| || ||||| || || || ||||| ||
Sbjct 978 GGGTCCCATATCTTACCATGGTCGATCTTCCC-GGTATAACTCGAGG--CCAGTGAATGG 1034
Query 549 ACAGCCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATGAAGTACATCGAGCCACA 608
||| || || || || || ||||||||||| |||||| | ||||||||||||||||||||
Sbjct 1035 ACAACCGGAGAATATTTACGAACAGATTTCTGGGATGATCATGAAGTACATCGAGCCACA 1094
Query 609 GGAATCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTCCAT 668
||||| || |||||||||||||||||||| ||||| || || || || ||||| |||||
Sbjct 1095 AGAATCAATAATCCTCAATGTTCTGTCAGCTACAGTCGACTTCACCACCTGTGAATCCAT 1154
Query 669 ACGTATGTCTAAGCAAGTTGATAAAACAGGCGAACGAACTCTGGCTGTTGTCACCAAGGC 728
|||| | | || | | || | |||||||| ||||||||||||||
Sbjct 1155 CCGTA----T------G-TG-----A-A--CG---G-ACTCTGGCCGTTGTCACCAAGGC 1191
Query 729 AGACATGGCTCCTGAAGGGCTCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTGGACT 788
|||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 1192 AGACATGGCTCCCGAAGGTCTCCTACAGAAAGTAACTGCGGATGATGTGAGTATTGGTCT 1251
Query 789 TGGTTATGTCTGTGTCAGAAACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAATGCA 848
||||| ||||||||||||||||| || ||||||||| |||||||| ||||| |||||||
Sbjct 1252 AGGTTACGTCTGTGTCAGAAACCGCATTGGAGAAGAG-CGTATGAACAAGCTAGAATGCA 1310
Query 849 AGAAGAGTTACTTTTTAGGAATCATCCAATGCTAAGCTTGATCGATGATGACATTGTGGG 908
||||||||| || || |||| ||| || ||||| |||||||| ||||| ||||| |||||
Sbjct 1311 AGAAGAGTTGCTCTTCAGGACTCACCCGATGCTGAGCTTGATTGATGAAGACATCGTGGG 1370
Query 909 CATCCCTG-TATTAGCTCACAAGTTGACGCAGATCCAGGGAATGATGATATCCCGATGTT 967
||||||| || ||||||| ||| | | || ||||| | || |||||| ||||| ||||
Sbjct 1371 AATCCCTGTTA-TAGCTCAGAAGCTAATGCTTATCCAAGCAACGATGATTTCCCGCTGTT 1429
Query 968 TGCCTGAAATCGAAAGGAAAATCAA-CGAGAAAATGGAGATCAG-TGTCCTCGAGTTTAA 1025
|||||||||||| | || ||||| | | || ||||| | | | |||||| ||||| ||
Sbjct 1430 TGCCTGAAATCGTTCGCAAGATCAATC-ACAAGATGGA-AACTGCTGTCCTGGAGTTGAA 1487
Query 1026 TAAGCTTCCAATAGTGATGGCTTCAACTGGGGAAGCATTGATGGC-TCTAATGGATGTCA 1084
||||| || || || |||||||| || || |||||||||||||| | | ||||| |||
Sbjct 1488 CAAGCTACCGATGGTTATGGCTTCTACCGGAGAAGCATTGATGGCAT-TGATGGACATCA 1546
Query 1085 TTGGTTCCGCCAAAGAGTCTCTCTTAAGAATTCTCGTCCAAGGAGATTTCTCTGAATACC 1144
||||||| ||||| ||||| ||||| ||||| || ||||||||||| |||||||||| ||
Sbjct 1547 TTGGTTCTGCCAAGGAGTCCCTCTTCAGAATCCTTGTCCAAGGAGACTTCTCTGAATTCC 1606
Query 1145 CCGATGATCAAAACATGCATTGTACTGCCCGCTTGGCTGAAATGTTGAA-CGGGTTCTCA 1203
| ||||| || |||||||| |||||||| || |||||||| ||||| || | |||||
Sbjct 1607 CGGATGACCAGAACATGCACTGTACTGCTCGTTTGGCTGACATGTT-AAGCCAATTCTCC 1665
Query 1204 GATAATCTGCAAGCACAA-TCTCAGGTCGCT-TCAGAGTTCTTGATGGACGAAATTAAAA 1261
||||||||||||| | || | ||| | | | |||||||||||| | || || || |
Sbjct 1666 GATAATCTGCAAG-AGAAGCCAAAGGAAG-TGACCGAGTTCTTGATGAATGAGATCAAGA 1723
Query 1262 T-TTTAGAAGAGTGCAAATGTATCGGATTGCCTAATTTTATCCCCAGATCTTCTTTCTTA 1320
| || || || ||||| ||| | ||| |||| ||||| |||||||| || | |||||
Sbjct 1724 TCCTT-GACGAATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCAGGTCAGCCTTCTTG 1782
Query 1321 GCTATCCTTTCACAACATGTGGATGGAATTCATGCCAAGCCGGTTGAGTTCATCAAAG-A 1379
||||| || |||||||| | |||| || |||| |||||| || ||||||||| ||| |
Sbjct 1783 GCTATACTATCACAACACGAAGATGCCATACATGTCAAGCCCGTGGAGTTCATC-AAGAA 1841
Query 1380 GATATGGGACTACATTGAAGTTGTTCTCTCGTCTGTCATTACCAAGTATTCTGACAACTT 1439
|||||||||||||||||||||||||||||| || |||||| ||||||||||||| |||||
Sbjct 1842 GATATGGGACTACATTGAAGTTGTTCTCTCATCCGTCATTGCCAAGTATTCTGAAAACTT 1901
Query 1440 TCCACAGATCCAATCCT-CCATCAAAAGGGCTGGTTGTAATCTAATGAGCAAGA-CTAAG 1497
|||||||||||||| | |||||||| | |||||| | |||||||| | ||||| | |||
Sbjct 1902 CCCACAGATCCAATC-TGCCATCAAACGTGCTGGTCGAAATCTAATCACCAAGATC-AAG 1959
Query 1498 GAAC 1501
||||
Sbjct 1960 GAAC 1963
Score = 455 bits (246), Expect = 8e-127
Identities = 379/443 (86%), Gaps = 9/443 (2%)
Strand=Plus/Plus
Query 1 ATGAGAGGTACCAAGAAGCATGTTGTCACTAG-AGC-C-TCTCCTTCTCTTGCTATTGTT 57
||| |||||| |||||||||||||||||||| | | | |||||||||||||| |||||
Sbjct 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTTCTCCTTCTCTTGCAATTGTC 60
Query 58 GAGGTGAAGCCTCATGACCACAAAGATGCTGTTCCTATTGAAGCACCGATTGTATCTTCT 117
||| ||| ||||||||| ||| ||| | |||||| || |||||||||||| |||||||
Sbjct 61 CAGGCGAATCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTATATCTTCA 120
Query 118 TACAATGATCA-GATCAGGCCACTGCTTGACACTGTGGACAGGCTAAGGAACCTGAATGT 176
|| || ||| | ||| ||||| |||||||||| || ||| | ||||||||||| |||||
Sbjct 121 TATAACGAT-AGGATTAGGCCGTTGCTTGACACGGTTGACCGTCTAAGGAACCTCAATGT 179
Query 177 GATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCGTCGGGGAA 236
|||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 180 GATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGAA 239
Query 237 GTCAAGTGTTCTTGAGTCCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCAC 296
||||||||| || || || ||||||||||||||| | |||||||| ||||||||||||||
Sbjct 240 GTCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCAC 299
Query 297 TAGGGTTCCTCTTGTCATGAGGCTCCAGCGAAGCTCTAGCCCTGAACCTGAAATCTGGCT 356
||||||||||||||||||| | || ||||||||||||||||||| |||||| || |||||
Sbjct 300 TAGGGTTCCTCTTGTCATGCGACTTCAGCGAAGCTCTAGCCCTGTACCTGAGATATGGCT 359
Query 357 GGAGTATAATGACAA-AGTTGTTCAGACGGATGAGGAACACATAGCT-AATGCTATATGT 414
||||| | |||||| | |||||| ||||||||||| ||||| ||| || ||||| |||
Sbjct 360 TGAGTACAGTGACAAGA-TTGTTCCCACGGATGAGGAGCACATCGCTGAA-GCTATCTGT 417
Query 415 GATGCGACTGATGTGATTGCTGG 437
| ||| || ||||||||||||||
Sbjct 418 GCTGCAACAGATGTGATTGCTGG 440
> AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220
REVERSE LENGTH=1928
Length=1928
Score = 604 bits (327), Expect = 7e-172
Identities = 570/685 (83%), Gaps = 26/685 (4%)
Strand=Plus/Minus
Query 1 ATGAGAGGTACCAAGAAGCATGTTGTCACTAG-AGC-C-TCTCCTTCTCTTGCTATTGTT 57
||| |||||| |||||||||||||||||||| | | | |||||||||||||| |||||
Sbjct 1883 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTTCTCCTTCTCTTGCAATTGTC 1824
Query 58 GAGGTGAAGCCTCATGACCACAAAGATGCTGTTCCTATTGAAGCACCGATTGTATCTTCT 117
||| ||| ||||||||| ||| ||| | |||||| || |||||||||||| |||||||
Sbjct 1823 CAGGCGAATCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTATATCTTCA 1764
Query 118 TACAATGATCA-GATCAGGCCACTGCTTGACACTGTGGACAGGCTAAGGAACCTGAATGT 176
|| || ||| | ||| ||||| |||||||||| || ||| | ||||||||||| |||||
Sbjct 1763 TATAACGAT-AGGATTAGGCCGTTGCTTGACACGGTTGACCGTCTAAGGAACCTCAATGT 1705
Query 177 GATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCGTCGGGGAA 236
|||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1704 GATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGAA 1645
Query 237 GTCAAGTGTTCTTGAGTCCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCAC 296
||||||||| || || || ||||||||||||||| | |||||||| ||||||||||||||
Sbjct 1644 GTCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCAC 1585
Query 297 TAGGGTTCCTCTTGTCATGAGGCTCCAGCGAAGCTCTAGCCCTGAACCTGAAATCTGGCT 356
||||||||||||||||||| | || ||||||||||||||||||| |||||| || |||||
Sbjct 1584 TAGGGTTCCTCTTGTCATGCGACTTCAGCGAAGCTCTAGCCCTGTACCTGAGATATGGCT 1525
Query 357 GGAGTATAATGACAA-AGTTGTTCAGACGGATGAGGAACACATAGCT-AATGCTATATGT 414
||||| | |||||| | |||||| ||||||||||| ||||| ||| || ||||| |||
Sbjct 1524 TGAGTACAGTGACAAGA-TTGTTCCCACGGATGAGGAGCACATCGCTGAA-GCTATCTGT 1467
Query 415 GATGCGACTGATGTGATTGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCT 473
| | | || | ||| ||||||||||||||||| |||||| | || || || ||
Sbjct 1466 G---C---T-AT---ACTGCAGGATCTGGCAAAGGGGTCTCAGACGCTCCA-TTGACCCT 1418
Query 474 CCATGTGAAGAAGGCTGGTGTTCCAGATATTACCATGGTTGATCT-CCCTGGGATAACCC 532
|||||| ||||||||||| || ||| || |||||||||| ||||| ||| || ||||| |
Sbjct 1417 CCATGTTAAGAAGGCTGGGGTCCCATATCTTACCATGGTCGATCTTCCC-GGTATAACTC 1359
Query 533 G-GGTTCCTGTGAACGGACAGCCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATG 591
| || || ||||| ||||| || || || || || ||||||||||| |||||| | |||
Sbjct 1358 GAGG--CCAGTGAATGGACAACCGGAGAATATTTACGAACAGATTTCTGGGATGATCATG 1301
Query 592 AAGTACATCGAGCCACAGGAATCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTT 651
||||||||||||||||| ||||| || |||||||||||||||||||| ||||| || ||
Sbjct 1300 AAGTACATCGAGCCACAAGAATCAATAATCCTCAATGTTCTGTCAGCTACAGTCGACTTC 1241
Query 652 ACAACTTGTGAGTCCATACGTATGT 676
|| || ||||| ||||| |||||||
Sbjct 1240 ACCACCTGTGAATCCATCCGTATGT 1216
Score = 446 bits (241), Expect = 5e-124
Identities = 508/636 (80%), Gaps = 22/636 (3%)
Strand=Plus/Minus
Query 877 ATGCTAAGCTTGATCGATGATGACATTGTGGGCATCCCTG-TATTAGCTCACAAGTTGAC 935
||||| |||||||| ||||| ||||| ||||| ||||||| || ||||||| ||| | |
Sbjct 1161 ATGCTGAGCTTGATTGATGAAGACATCGTGGGAATCCCTGTTA-TAGCTCAGAAGCTAAT 1103
Query 936 GCAGATCCAGGGAATGATGATATCCCGATGTTTGCCTGAAATCGAAAGGAAAATCAA-CG 994
|| ||||| | || |||||| ||||| |||||||||||||||| | || ||||| |
Sbjct 1102 GCTTATCCAAGCAACGATGATTTCCCGCTGTTTGCCTGAAATCGTTCGCAAGATCAATC- 1044
Query 995 AGAAAATGGAGATCAG-TGTCCTCGAGTTTAATAAGCTTCCAATAGTGATGGCTTCAACT 1053
| || ||||| | | | |||||| ||||| || ||||| || || || |||||||| ||
Sbjct 1043 ACAAGATGGA-AACTGCTGTCCTGGAGTTGAACAAGCTACCGATGGTTATGGCTTCTACC 985
Query 1054 GGGGAAGCATTGATGGC-TCTAATGGATGTCATTGGTTCCGCCAAAGAGTCTCTCTTAAG 1112
|| |||||||||||||| | | ||||| |||||||||| ||||| ||||| ||||| ||
Sbjct 984 GGAGAAGCATTGATGGCAT-TGATGGACATCATTGGTTCTGCCAAGGAGTCCCTCTTCAG 926
Query 1113 AATTCTCGTCCAAGGAGATTTCTCTGAATACCCCGATGATCAAAACATGCATTGTACTGC 1172
||| || ||||||||||| |||||||||| ||| ||||| || |||||||| ||||||||
Sbjct 925 AATCCTTGTCCAAGGAGACTTCTCTGAATTCCCGGATGACCAGAACATGCACTGTACTGC 866
Query 1173 CCGCTTGGCTGAAATGTTGAA-CGGGTTCTCAGATAATCTGCAAGCACAA-TCTCAGGTC 1230
|| |||||||| ||||| || | ||||| ||||||||||||| | || | |||
Sbjct 865 TCGTTTGGCTGACATGTT-AAGCCAATTCTCCGATAATCTGCAAG-AGAAGCCAAAGGAA 808
Query 1231 GCT-TCAGAGTTCTTGATGGACGAAATTAAAAT-TTTAGAAGAGTGCAAATGTATCGGAT 1288
| | | |||||||||||| | || || || || || || || ||||| ||| | |||
Sbjct 807 G-TGACCGAGTTCTTGATGAATGAGATCAAGATCCTT-GACGAATGCAAGTGTGTTGGAC 750
Query 1289 TGCCTAATTTTATCCCCAGATCTTCTTTCTTAGCTATCCTTTCACAACATGTGGATGGAA 1348
|||| ||||| |||||||| || | ||||| ||||| || |||||||| | |||| |
Sbjct 749 TGCCCAATTTCATCCCCAGGTCAGCCTTCTTGGCTATACTATCACAACACGAAGATGCCA 690
Query 1349 TTCATGCCAAGCCGGTTGAGTTCATCAAAG-AGATATGGGACTACATTGAAGTTGTTCTC 1407
| |||| |||||| || ||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 689 TACATGTCAAGCCCGTGGAGTTCATC-AAGAAGATATGGGACTACATTGAAGTTGTTCTC 631
Query 1408 TCGTCTGTCATTACCAAGTATTCTGACAACTTTCCACAGATCCAATCCT-CCATCAAAAG 1466
|| || |||||| ||||||||||||| ||||| |||||||||||||| | |||||||| |
Sbjct 630 TCATCCGTCATTGCCAAGTATTCTGAAAACTTCCCACAGATCCAATC-TGCCATCAAACG 572
Query 1467 GGCTGGTTGTAATCTAATGAGCAAGA-CTAAGGAAC 1501
|||||| | |||||||| | ||||| | |||||||
Sbjct 571 TGCTGGTCGAAATCTAATCACCAAGATC-AAGGAAC 537
Score = 403 bits (218), Expect = 3e-111
Identities = 338/395 (86%), Gaps = 12/395 (3%)
Strand=Plus/Minus
Query 1519 AAA-CCTGA-CTACTTCTCTTTAACTGGATTT-G-GGAA-TGTGAAGATCTCGCATCTAC 1573
||| ||||| | ||||||| || ||||||||| | |||| |||||||||||| || ||||
Sbjct 397 AAAGCCTGAGC-ACTTCTCGTTGACTGGATTTGGTGGAATTGTGAAGATCTCTCACCTAC 339
Query 1574 -GACATTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCA-CATC 1631
|| | ||||| |||||| | ||||| ||||| || ||||||||||||||||| | ||||
Sbjct 338 GGA-AGTATCATGCTCATCTCCTGCAGCAAGCCTTCGATATGAAGATGAGGAT-AGCATC 281
Query 1632 GTACTGGACAATCGTCCTGCGAAGGATTGTGGATAATCTTGCTCTGTTTCTTCAGTTTTC 1691
|||||||| || ||| | |||||||||||||| | ||||||||||| ||||||| | ||
Sbjct 280 TTACTGGACGATAGTCTTACGAAGGATTGTGGACAGTCTTGCTCTGTATCTTCAGCTGTC 221
Query 1692 TGTGAAGAATCTGGTCAA-TAGTCAGTTTCAGAAGGAGATAGTTGCGGAAATGGTGGATA 1750
||||||||||| || || || | |||||||||||||||| || ||||| |||||||||
Sbjct 220 AGTGAAGAATCTCGTGAATTA-TTAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATC 162
Query 1751 CAAGAGCTGGCGGAGGAATTGAGAGGATGCTGGAGGAGTCTCCGTTGGTTGCGAGCAAGA 1810
|||||||||||||||| || |||||||||| |||||||| |||| ||| ||||||||||
Sbjct 161 CAAGAGCTGGCGGAGGTCTTCAGAGGATGCTAGAGGAGTCGCCGTCGGTGGCGAGCAAGA 102
Query 1811 GGGAGAAGCTGAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGACGTTGTGGCGGCGA 1870
| |||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |
Sbjct 101 GAGAGAAGCTGAAGAACAGTATCAAGCTTCCGAAGGAGTCCAAGGATGCAGTGGCGGCCA 42
Query 1871 TCGTTGATCAGAATTCTGGGTACGGAGATCGTTGA 1905
| || ||||||| ||||||||||||||||||||||
Sbjct 41 TTGTCGATCAGAGTTCTGGGTACGGAGATCGTTGA 7
> AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305
REVERSE LENGTH=1669
Length=1669
Score = 420 bits (227), Expect = 3e-116
Identities = 306/345 (89%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 94 ATTGAAGCACCGATTGTATCTTCTTACAATGATCAGATCAGGCCACTGCTTGACACTGTG 153
||||||||||| |||||||| ||||||||||| | |||| ||||| |||||||||||||
Sbjct 1332 ATTGAAGCACCAATTGTATCATCTTACAATGACCGGATCCGGCCATTGCTTGACACTGTC 1273
Query 154 GACAGGCTAAGGAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTG 213
||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1272 GACAGATTGAGAAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTGGTG 1213
Query 214 GTTGGAGACCAGTCGTCGGGGAAGTCAAGTGTTCTTGAGTCCTTGGCAGGAATCAGTTTG 273
|||||||||||||| || |||||||| |||||||||||||| ||||||||||||| ||||
Sbjct 1212 GTTGGAGACCAGTCTTCAGGGAAGTCGAGTGTTCTTGAGTCGTTGGCAGGAATCAATTTG 1153
Query 274 CCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATGAGGCTCCAGCGAAGCTCT 333
|||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1152 CCTCGTGGACAAGGAATCTGCACTAGGGTTCCTCTAGTCATGAGGCTTCAGCGAAGCTCC 1093
Query 334 AGCCCTGAACCTGAAATCTGGCTGGAGTATAATGACAAAGTTGTTCAGACGGATGAGGAA 393
||||||||||| || || |||||||| || | |||||||||||||| || ||||| |||
Sbjct 1092 AGCCCTGAACCAGAGATTTGGCTGGAATACAGTGACAAAGTTGTTCCCACAGATGAAGAA 1033
Query 394 CACATAGCT-AATGCTATATGTGATGCGACTGATGTGATTGCTGG 437
||| | ||| || ||||| |||| ||| || ||||||||||||||
Sbjct 1032 CACGTCGCTGAA-GCTATTTGTGCTGCAACAGATGTGATTGCTGG 989
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94326824055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5