BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg338327
Length=1980
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr... 1873 0.0
AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-... 1821 0.0
AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220 RE... 1509 0.0
AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family... 1447 0.0
AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156 FO... 1380 0.0
AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr... 688 0.0
AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305 RE... 409 6e-113
> AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293964
FORWARD LENGTH=2152
Length=2152
Score = 1873 bits (1014), Expect = 0.0
Identities = 1456/1670 (87%), Gaps = 28/1670 (2%)
Strand=Plus/Plus
Query 300 GATTTGGCTTGAGTACAGTGACAAAGTTGTTCCCACAGATGAAGAACACATCACTGAAGC 359
||||||||||||||| | |||||||| ||||| || || || ||||||||| |||||||
Sbjct 345 GATTTGGCTTGAGTATAACGACAAAGTGGTTCCTACGGACGAGGAACACATCGCTGAAGC 404
Query 360 TATTTGCGCTGCAACAGATGTGATTGCAGGATCTGGTAAAGGGGTCTCAGACGCTCCATT 419
|||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 405 TATTCGTGCTGCAACAGATGTGATTGCTGGATCTGGTAAAGGGGTCTCAGATGCTCCATT 464
Query 420 GACCCTCCATGTGAAGAAGGCTGGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAAT 479
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct 465 GACCCTCCATGTGAAGAAGGCTGGTGTTCCAGACCTTACGATGGTCGATCTTCCCGGTAT 524
Query 480 AACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGATCTCTTCAATGAT 539
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 525 AACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGATCTCTGGGATGAT 584
Query 540 CATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAACGTTCTGTCAGCTACGGTGGA 599
||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 585 TATGGAGTACATTGAGCCTCAAGAATCAATAATCCTCAATGTTCTGTCAGCTACGGTCGA 644
Query 600 TTTCACCACATGTGAATCCATTCGCATGTCAAGACAAGTTGACAAAACCGGTGAGCGGAC 659
||||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||
Sbjct 645 CTTCACCACATGCGAATCCATTCGCATGTCTAGAAAAGTTGACAAAACCGGTCAACGGAC 704
Query 660 TTTGGCTGTTGTCACAAAGGCAGACATGGCTCCTGAAGGACTCCTGCAGAAAGTAACAGC 719
| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct 705 ACTAGCTGTTGTGACAAAGGCAGACATGGCTCCTGAAGGTCTCTTGCAGAAAGTAACTGC 764
Query 720 AGATGATGTGAGTATAGGTCTAGGTTACGTCTGTGTCAGAAACCGCATAGGCGAAGAGTC 779
||||||||||||||| | ||| |||||||| || |||||||||||||| || |||||| |
Sbjct 765 AGATGATGTGAGTATTGTTCTTGGTTACGTGTGCGTCAGAAACCGCATTGGAGAAGAGAC 824
Query 780 ATATGAAGAAGCAAGAATTCAAGAAGAGTTACTTTTCAGGACTCATCCAATGCTAAGCTT 839
||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||| ||
Sbjct 825 ATATGAAGAAGCAAGGATGCAAGAAGAGTTACTTTTCAGGACCCATCCAGTGCTAAGTTT 884
Query 840 GATCGATGATGACATTGTGGGAGTCCCTGTTTTAGCTCAGAAGCTAATGTTTATCCAAGC 899
|| ||||| ||||| |||||| ||||||| |||||||||||||||||| |||||||| |
Sbjct 885 AATTGATGAAGACATAGTGGGAATCCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAATC 944
Query 900 AA-CGATGATTTCCCGCTGTTTGCCTGAAATTGTTCGCAAGATCAATCACAAGATGGAAA 958
|| | |||||| | | ||||||||| ||||||| |||||||||| || ||| |||| |
Sbjct 945 AAGC-ATGATTGCTAGATGTTTGCCTAAAATTGTAAGCAAGATCAACCAGAAGTTGGACA 1003
Query 959 CCGCTGTCCTTGAGTTGAACAAGTTACCGATGGTAATGGCTTCTACCGGAGAAGCATTGA 1018
| ||||| || ||||||||||| | || |||||||||||||||||||| ||||||||||
Sbjct 1004 CTGCTGTTCTAGAGTTGAACAAACTGCCAATGGTAATGGCTTCTACCGGGGAAGCATTGA 1063
Query 1019 TGGCATTGATGGACATCATTGGTTCTGCCAAGGAGTCACTCTTAAGAATTCTCGTTCAAG 1078
||||||||||||||||||||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct 1064 TGGCATTGATGGACATCATTGGTTCTGCCAAAGAGTCCCTCTTAAGGATTCTAGTCCAAG 1123
Query 1079 GAGATTTCTCTGAATTCCCTGATGATCAGAACATGCATTGTACTGCTCGCTTGGCTGATA 1138
|||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1124 GAGACTTCTCTGAATACCCAGATGATCAGAACATGCATTGTACTGCTCGCTTGGCTGATA 1183
Query 1139 TGTTAAGCCAATTCTCCGATAATCTGCAAGCCAAGCCAGAGGACGTGACCGAGTTCTTAA 1198
|||||||||||||||| |||| ||||||||| |||||| | || ||| |||||||||| |
Sbjct 1184 TGTTAAGCCAATTCTCTGATAGTCTGCAAGCAAAGCCAAAAGAAGTGGCCGAGTTCTTGA 1243
Query 1199 TGGACGAAATCAAGATCCTTGACGAGTGCAAGTGTGTTGGATTGCCCAATTTCATCCCGA 1258
|||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||| |
Sbjct 1244 TGGATGAGATCAAGATCCTTGACGAATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCA 1303
Query 1259 GATCAGCTTTCTTGGCCATTCTCTCACAACACGTTGA-GAATATTCATGTCAAGCCAGTG 1317
| ||||| |||||||| || || |||||||| ||||| | ||| || | |||||||||
Sbjct 1304 GGTCAGCCTTCTTGGCTATACTTTCACAACATGTTGATGG-TATACAAGACAAGCCAGTT 1362
Query 1318 GAGTTCATCAGGAAGATCTGGGACTACATTGAAGTTGTTCTCTCATCAGTCATTACCAAG 1377
|||||||||| ||||| |||||||||||||||| |||||||||||| |||| | | |||
Sbjct 1363 GAGTTCATCAACAAGATATGGGACTACATTGAAGATGTTCTCTCATCCGTCACTGCTAAG 1422
Query 1378 TACTCGGAAAACTTCCCGCAGATCCAATCAGCCATCAAACGTGCCGGTCGAAATCTAATC 1437
|| || || ||||| ||||| ||||| |||||||||| |||||||| ||||| |||
Sbjct 1423 CGTTCTGACAATTTCCCACAGATTCAATCTTCCATCAAACGAGCCGGTCGTAATCTCATC 1482
Query 1438 ACCAAGATCAAGGAACAATCAGTAGAG-CGAGTGATGGAGATAGTTGAAATGGAGAAGCT 1496
|||||||||| |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct 1483 TCCAAGATCAAAGAACAATCTGT-GAATCGAGTGATGGAGATCGTTGAGATGGAGAAGCT 1541
Query 1497 GACGGATTACACATGTAACCCTGAGTACATGACGTCTTGGACCCAGAAAACT-GCTGAAC 1555
||| |||||||||||||||||||||||||||||||||||||| ||||| || | || ||
Sbjct 1542 GACTGATTACACATGTAACCCTGAGTACATGACGTCTTGGACTCAGAAGACAAG-TGCAC 1600
Query 1556 AACAAAACTTCATTC-ATGCTGT-GTTGTACGATGCGAAAA-AGCCTGAAC-ACTTCTC- 1610
|| | | |||||| | ||||||| || | | ||| ||| | | ||||| | |||||||
Sbjct 1601 AAGAGAGCTTCAT-CGATGCTGTTGT-GAAAAATGAGAACATA-CCTGA-CTACTTCTCT 1656
Query 1611 GTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGGAAGTATCACGCTCATCTT-C 1669
|| | |||||||||| ||||||||||| ||||||||||| ||||||||||||||| || |
Sbjct 1657 GTGA-CTGGATTTGGAAATGTGAAGATTTCGCATCTACGAAAGTATCACGCTCAT-TTAC 1714
Query 1670 TGCAA-CAAGCGTTT-GATATGAAGATGAGGATCACATCATACTGGAGGATCGTCTTGCG 1727
|| | | || ||| || |||||||||||||||||||| ||||||| ||||||| ||||
Sbjct 1715 TG-ATTCCGGC-TTTCGACATGAAGATGAGGATCACATCTTACTGGAAGATCGTCCTGCG 1772
Query 1728 TAGGATTGTTGACAGCCTTGCGCTGTATCTTCAACTATCTGTGAAATATCTCGTGAACAG 1787
|| || || |||| |||||| ||||||||||| ||||||||||| | |||||| ||||
Sbjct 1773 GAGAATCGTAGACAACCTTGCACTGTATCTTCAGCTATCTGTGAAGTCTCTCGTCAACAC 1832
Query 1788 TC-AGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAGTGG 1846
|| | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| |
Sbjct 1833 TCGA-TTTCAGAAGGAGATTGTGGCGGAAATGGTTGATCCAAGAGATGGTGGAGGAGTTG 1891
Query 1847 AGAGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAGAAGCTTAAGAACAGTA 1906
| | |||| ||||||||||||||| |||||| ||||| |||||||||||| |||| ||||
Sbjct 1892 AAAAGATGTTGGAGGAGTCTCCGTTGGTGGCGAGCAAAAGGGAGAAGCTTCAGAATAGTA 1951
Query 1907 TCAAGCTTCT-GAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCA 1955
||||||| || ||||||||| |||||||||||||||||||||||||||||
Sbjct 1952 TCAAGCT-CTTGAAGGAGTCTAAGGATGCTGTGGCCGCCATTGTTGATCA 2000
Score = 296 bits (160), Expect = 5e-79
Identities = 205/227 (90%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 75 CAACAAAGCTGTTGTTCCCATTGAAGCACC-AATAGTATCATCGTATAATGACCGCATCA 133
|||||||| ||||||| | |||||||||| | || |||| || ||||| || || || |
Sbjct 72 CAACAAAGATGTTGTTTCTGTTGAAGCACCGATTA-TATCTTCATATAACGATCGGATAA 130
Query 134 GGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATGTGATGAGAGAAGGGATCC 193
||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct 131 GGCCGTTGCTTGACACTGTGGACAGACTTAGGAACCTCAATGTCATGAGAGAAGGGATCC 190
Query 194 AGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGAAGTCAAGTGTTCTTGAAT 253
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 ATCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCAGGGAAGTCAAGTGTTCTTGAAT 250
Query 254 CCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGG 300
||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 251 CCTTGGCAGGAATCAGTTTACCTCGTGGCCAAGGAATCTGCACTAGG 297
> AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-induced
GTP-binding protein mx, blastp match of 42% identity
and 8.3e-35 P-value to GP|1399454|gb|AAC60215.1||U47946 RBTMx3
{Oncorhynchus mykiss} | chr1:22294722-22297139 FORWARD
LENGTH=2418
Length=2418
Score = 1821 bits (986), Expect = 0.0
Identities = 1355/1530 (89%), Gaps = 38/1530 (2%)
Strand=Plus/Plus
Query 384 TGCAGGATCTGGTAAAGGGGTCTCAGACGCTCCATTGACCCTCCATGTGAAGAAGGCTGG 443
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 919 TGCAGGATCTGGCAAAGGGGTCTCAGACGCTCCATTGACCCTCCATGTTAAGAAGGCTGG 978
Query 444 TGTTCCAGATCTTACCATGGTCGATCTTCCTGGAATAACTCGAGTTCCAGTGAATGGACA 503
|| ||| |||||||||||||||||||||| || |||||||||| ||||||||||||||
Sbjct 979 GGTCCCATATCTTACCATGGTCGATCTTCCCGGTATAACTCGAG-GCCAGTGAATGGACA 1037
Query 504 GCCGGAAAATATTTATGAGCAGATCTCTTCAATGATCATGAAGTACATCGAGCCTCAAGA 563
||||| |||||||| || ||||| ||| ||||||||||||||||||||||| |||||
Sbjct 1038 ACCGGAGAATATTTACGAACAGATTTCTGGGATGATCATGAAGTACATCGAGCCACAAGA 1097
Query 564 ATCAATAATCCTCAACGTTCTGTCAGCTACGGTGGATTTCACCACATGTGAATCCATTCG 623
||||||||||||||| |||||||||||||| || || |||||||| |||||||||| ||
Sbjct 1098 ATCAATAATCCTCAATGTTCTGTCAGCTACAGTCGACTTCACCACCTGTGAATCCA-TC- 1155
Query 624 CATGTCAAGACAAGTTGACAAAACCGGTGAGCGGACTTTGGCTGTTGTCACAAAGGCAGA 683
| || | | |||| |||||| |||| |||||||| ||||||||
Sbjct 1156 C--GT-------A--T----------GTGAACGGACTCTGGCCGTTGTCACCAAGGCAGA 1194
Query 684 CATGGCTCCTGAAGGACTCCTGCAGAAAGTAACAGCAGATGATGTGAGTATAGGTCTAGG 743
||||||||| ||||| ||||| ||||||||||| || |||||||||||||| ||||||||
Sbjct 1195 CATGGCTCCCGAAGGTCTCCTACAGAAAGTAACTGCGGATGATGTGAGTATTGGTCTAGG 1254
Query 744 TTACGTCTGTGTCAGAAACCGCATAGGCGAAGAGTCATATGAAGAAGCAAGAATTCAAGA 803
|||||||||||||||||||||||| || |||||| | |||||| |||| ||||| |||||
Sbjct 1255 TTACGTCTGTGTCAGAAACCGCATTGGAGAAGAG-CGTATGAACAAGCTAGAATGCAAGA 1313
Query 804 AGAGTTACTTTTCAGGACTCATCCAATGCTAAGCTTGATCGATGATGACATTGTGGGAGT 863
|||||| || ||||||||||| || ||||| |||||||| ||||| ||||| |||||| |
Sbjct 1314 AGAGTTGCTCTTCAGGACTCACCCGATGCTGAGCTTGATTGATGAAGACATCGTGGGAAT 1373
Query 864 CCCTGTTTTAGCTCAGAAGCTAATGTTTATCCAAGCAACGATGATTTCCCGCTGTTTGCC 923
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1374 CCCTGTTATAGCTCAGAAGCTAATGCTTATCCAAGCAACGATGATTTCCCGCTGTTTGCC 1433
Query 924 TGAAATTGTTCGCAAGATCAATCACAAGATGGAAACCGCTGTCCTTGAGTTGAACAAGTT 983
|||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 1434 TGAAATCGTTCGCAAGATCAATCACAAGATGGAAACTGCTGTCCTGGAGTTGAACAAGCT 1493
Query 984 ACCGATGGTAATGGCTTCTACCGGAGAAGCATTGATGGCATTGATGGACATCATTGGTTC 1043
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 ACCGATGGTTATGGCTTCTACCGGAGAAGCATTGATGGCATTGATGGACATCATTGGTTC 1553
Query 1044 TGCCAAGGAGTCACTCTTAAGAATTCTCGTTCAAGGAGATTTCTCTGAATTCCCTGATGA 1103
|||||||||||| ||||| ||||| || || |||||||| |||||||||||||| |||||
Sbjct 1554 TGCCAAGGAGTCCCTCTTCAGAATCCTTGTCCAAGGAGACTTCTCTGAATTCCCGGATGA 1613
Query 1104 TCAGAACATGCATTGTACTGCTCGCTTGGCTGATATGTTAAGCCAATTCTCCGATAATCT 1163
||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1614 CCAGAACATGCACTGTACTGCTCGTTTGGCTGACATGTTAAGCCAATTCTCCGATAATCT 1673
Query 1164 GCAAGCCAAGCCAGAGGACGTGACCGAGTTCTTAATGGACGAAATCAAGATCCTTGACGA 1223
||||| |||||| |||| |||||||||||||| ||| | || |||||||||||||||||
Sbjct 1674 GCAAGAGAAGCCAAAGGAAGTGACCGAGTTCTTGATGAATGAGATCAAGATCCTTGACGA 1733
Query 1224 GTGCAAGTGTGTTGGATTGCCCAATTTCATCCCGAGATCAGCTTTCTTGGCCATTCTCTC 1283
||||||||||||||| |||||||||||||||| || ||||| |||||||| || || ||
Sbjct 1734 ATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCAGGTCAGCCTTCTTGGCTATACTATC 1793
Query 1284 ACAACACGTTGA-GA-ATATTCATGTCAAGCCAGTGGAGTTCATCAGGAAGATCTGGGAC 1341
|||||||| || | ||| ||||||||||| ||||||||||||| |||||| ||||||
Sbjct 1794 ACAACACGAAGATGCCATA--CATGTCAAGCCCGTGGAGTTCATCAAGAAGATATGGGAC 1851
Query 1342 TACATTGAAGTTGTTCTCTCATCAGTCATTACCAAGTACTCGGAAAACTTCCCGCAGATC 1401
||||||||||||||||||||||| |||||| ||||||| || ||||||||||| ||||||
Sbjct 1852 TACATTGAAGTTGTTCTCTCATCCGTCATTGCCAAGTATTCTGAAAACTTCCCACAGATC 1911
Query 1402 CAATCAGCCATCAAACGTGCCGGTCGAAATCTAATCACCAAGATCAAGGAACAATCAGTA 1461
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 1912 CAATCTGCCATCAAACGTGCTGGTCGAAATCTAATCACCAAGATCAAGGAACACTCTGTG 1971
Query 1462 GAGCGAGTGATGGAGATAGTTGAAATGGAGAAGCTGACGGATTACACATGTAACCCTGAG 1521
||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1972 GAGCGAGTGTTGGAGATTGTTGAAATGGAGAAGCTGACTGATTACACATGTAACCCTGAG 2031
Query 1522 TACATGACGTCTTGGACCCAGAAAACTGCTGAACAACAAAACTTCATTCATGCTGTGTTG 1581
||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||
Sbjct 2032 TACATGACGTCTTGGACTCAGATGACTGCTGAACAACAAAACTTCATTTATGCTGTGTTG 2091
Query 1582 TACGATGCGAAAAAGCCTGAACACTTCTCGTTAACTGGATTTGG-G-AAT-GTGAAGATC 1638
| ||||| |||||||||||| ||||||||||| ||||||||||| | ||| |||||||||
Sbjct 2092 TCCGATGGGAAAAAGCCTGAGCACTTCTCGTTGACTGGATTTGGTGGAATTGTGAAGATC 2151
Query 1639 TCGCATCTACGGAAGTATCACGCTCATCTTCTGCAACAAGCGTTTGATATGAAGATGAGG 1698
|| || |||||||||||||| |||||||| ||||| ||||| || |||||||||||||||
Sbjct 2152 TCTCACCTACGGAAGTATCATGCTCATCTCCTGCAGCAAGCCTTCGATATGAAGATGAGG 2211
Query 1699 ATCA-CATCATACTGGAGGATCGTCTTGCGTAGGATTGTTGACAGCCTTGCGCTGTATCT 1757
|| | |||| ||||||| ||| ||||| || |||||||| ||||| ||||| ||||||||
Sbjct 2212 AT-AGCATCTTACTGGACGATAGTCTTACGAAGGATTGTGGACAGTCTTGCTCTGTATCT 2270
Query 1758 TCAACTATCTGTGAA-ATATCTCGTGAAC-AGTCAGTTTCAGAAGGAGATTGTGGCGGAG 1815
||| || || ||||| | |||||||||| | | ||||||||||||||||||||||||||
Sbjct 2271 TCAGCTGTCAGTGAAGA-ATCTCGTGAATTATT-AGTTTCAGAAGGAGATTGTGGCGGAG 2328
Query 1816 ATGGTGGATCCAAGAGCTGGCGGAGGAGTGGAGAGGATGCTGGAGGAGTCTCCGTCGGTG 1875
|||||||||||||||||||||||||| | |||||||||| |||||||| |||||||||
Sbjct 2329 ATGGTGGATCCAAGAGCTGGCGGAGGTCTTCAGAGGATGCTAGAGGAGTCGCCGTCGGTG 2388
Query 1876 GCAAGCAAGAGGGAGAAGCTTAAGAACAGT 1905
|| |||||||| |||||||| |||||||||
Sbjct 2389 GCGAGCAAGAGAGAGAAGCTGAAGAACAGT 2418
Score = 346 bits (187), Expect = 5e-94
Identities = 267/305 (88%), Gaps = 7/305 (2%)
Strand=Plus/Plus
Query 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCT-C-C-TTCTCTTGCCATTGTT 57
||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||
Sbjct 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTTCTCCTTCTCTTGCAATTGTC 60
Query 58 GAAGC-ACATCCTCATGACAACAAAGCTGTTGTTCCCATTGAAGCACCAAT-AGTATCAT 115
| || | ||||||||||||||| || ||||||||||| |||||||| || | |||| |
Sbjct 61 CAGGCGA-ATCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTA-TATCTT 118
Query 116 CGTATAATGACCGCATCAGGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATG 175
| ||||| || | || ||||||||||||||||| |||||| | ||||||||||||||||
Sbjct 119 CATATAACGATAGGATTAGGCCGTTGCTTGACACGGTTGACCGTCTAAGGAACCTCAATG 178
Query 176 TGATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGA 235
||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 179 TGATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGA 238
Query 236 AGTCAAGTGTTCTTGAATCCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCA 295
|||||||||| || || || ||||| ||||||||| | |||||||| |||||||||||||
Sbjct 239 AGTCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCA 298
Query 296 CTAGG 300
|||||
Sbjct 299 CTAGG 303
> AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220
REVERSE LENGTH=1928
Length=1928
Score = 1509 bits (817), Expect = 0.0
Identities = 1048/1160 (90%), Gaps = 13/1160 (1%)
Strand=Plus/Minus
Query 829 ATGCTAAGCTTGATCGATGATGACATTGTGGGAGTCCCTGTTTTAGCTCAGAAGCTAATG 888
||||| |||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||
Sbjct 1161 ATGCTGAGCTTGATTGATGAAGACATCGTGGGAATCCCTGTTATAGCTCAGAAGCTAATG 1102
Query 889 TTTATCCAAGCAACGATGATTTCCCGCTGTTTGCCTGAAATTGTTCGCAAGATCAATCAC 948
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1101 CTTATCCAAGCAACGATGATTTCCCGCTGTTTGCCTGAAATCGTTCGCAAGATCAATCAC 1042
Query 949 AAGATGGAAACCGCTGTCCTTGAGTTGAACAAGTTACCGATGGTAATGGCTTCTACCGGA 1008
||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||||
Sbjct 1041 AAGATGGAAACTGCTGTCCTGGAGTTGAACAAGCTACCGATGGTTATGGCTTCTACCGGA 982
Query 1009 GAAGCATTGATGGCATTGATGGACATCATTGGTTCTGCCAAGGAGTCACTCTTAAGAATT 1068
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 981 GAAGCATTGATGGCATTGATGGACATCATTGGTTCTGCCAAGGAGTCCCTCTTCAGAATC 922
Query 1069 CTCGTTCAAGGAGATTTCTCTGAATTCCCTGATGATCAGAACATGCATTGTACTGCTCGC 1128
|| || |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 921 CTTGTCCAAGGAGACTTCTCTGAATTCCCGGATGACCAGAACATGCACTGTACTGCTCGT 862
Query 1129 TTGGCTGATATGTTAAGCCAATTCTCCGATAATCTGCAAGCCAAGCCAGAGGACGTGACC 1188
|||||||| ||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 861 TTGGCTGACATGTTAAGCCAATTCTCCGATAATCTGCAAGAGAAGCCAAAGGAAGTGACC 802
Query 1189 GAGTTCTTAATGGACGAAATCAAGATCCTTGACGAGTGCAAGTGTGTTGGATTGCCCAAT 1248
|||||||| ||| | || ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 801 GAGTTCTTGATGAATGAGATCAAGATCCTTGACGAATGCAAGTGTGTTGGACTGCCCAAT 742
Query 1249 TTCATCCCGAGATCAGCTTTCTTGGCCATTCTCTCACAACACGTTGA-GA-ATATTCATG 1306
|||||||| || ||||| |||||||| || || |||||||||| || | ||| ||||
Sbjct 741 TTCATCCCCAGGTCAGCCTTCTTGGCTATACTATCACAACACGAAGATGCCATA--CATG 684
Query 1307 TCAAGCCAGTGGAGTTCATCAGGAAGATCTGGGACTACATTGAAGTTGTTCTCTCATCAG 1366
||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct 683 TCAAGCCCGTGGAGTTCATCAAGAAGATATGGGACTACATTGAAGTTGTTCTCTCATCCG 624
Query 1367 TCATTACCAAGTACTCGGAAAACTTCCCGCAGATCCAATCAGCCATCAAACGTGCCGGTC 1426
||||| ||||||| || ||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 623 TCATTGCCAAGTATTCTGAAAACTTCCCACAGATCCAATCTGCCATCAAACGTGCTGGTC 564
Query 1427 GAAATCTAATCACCAAGATCAAGGAACAATCAGTAGAGCGAGTGATGGAGATAGTTGAAA 1486
|||||||||||||||||||||||||||| || || ||||||||| ||||||| |||||||
Sbjct 563 GAAATCTAATCACCAAGATCAAGGAACACTCTGTGGAGCGAGTGTTGGAGATTGTTGAAA 504
Query 1487 TGGAGAAGCTGACGGATTACACATGTAACCCTGAGTACATGACGTCTTGGACCCAGAAAA 1546
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 503 TGGAGAAGCTGACTGATTACACATGTAACCCTGAGTACATGACGTCTTGGACTCAGATGA 444
Query 1547 CTGCTGAACAACAAAACTTCATTCATGCTGTGTTGTACGATGCGAAAAAGCCTGAACACT 1606
||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||
Sbjct 443 CTGCTGAACAACAAAACTTCATTTATGCTGTGTTGTCCGATGGGAAAAAGCCTGAGCACT 384
Query 1607 TCTCGTTAACTGGATTTGG-G-AAT-GTGAAGATCTCGCATCTACGGAAGTATCACGCTC 1663
||||||| ||||||||||| | ||| ||||||||||| || |||||||||||||| ||||
Sbjct 383 TCTCGTTGACTGGATTTGGTGGAATTGTGAAGATCTCTCACCTACGGAAGTATCATGCTC 324
Query 1664 ATCTTCTGCAACAAGCGTTTGATATGAAGATGAGGATCA-CATCATACTGGAGGATCGTC 1722
|||| ||||| ||||| || ||||||||||||||||| | |||| ||||||| ||| |||
Sbjct 323 ATCTCCTGCAGCAAGCCTTCGATATGAAGATGAGGAT-AGCATCTTACTGGACGATAGTC 265
Query 1723 TTGCGTAGGATTGTTGACAGCCTTGCGCTGTATCTTCAACTATCTGTGAA-ATATCTCGT 1781
|| || |||||||| ||||| ||||| ||||||||||| || || ||||| | |||||||
Sbjct 264 TTACGAAGGATTGTGGACAGTCTTGCTCTGTATCTTCAGCTGTCAGTGAAGA-ATCTCGT 206
Query 1782 GAAC-AGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAG 1840
||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 GAATTATT-AGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAG 147
Query 1841 GAGTGGAGAGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAGAAGCTTAAGA 1900
| | |||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||
Sbjct 146 GTCTTCAGAGGATGCTAGAGGAGTCGCCGTCGGTGGCGAGCAAGAGAGAGAAGCTGAAGA 87
Query 1901 ACAGTATCAAGCTTCTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCAGAGTT 1960
||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct 86 ACAGTATCAAGCTTCCGAAGGAGTCCAAGGATGCAGTGGCGGCCATTGTCGATCAGAGTT 27
Query 1961 CTGGGTACGGAGATCGTTGA 1980
||||||||||||||||||||
Sbjct 26 CTGGGTACGGAGATCGTTGA 7
Score = 348 bits (188), Expect = 1e-94
Identities = 285/330 (86%), Gaps = 13/330 (4%)
Strand=Plus/Minus
Query 300 GATTTGGCTTGAGTACAGTGACAAAG-TTGTTCCCACAGATGAAGAACACATCACTGAAG 358
||| |||||||||||||||||| ||| |||||||||| ||||| || |||||| ||||||
Sbjct 1533 GATATGGCTTGAGTACAGTGAC-AAGATTGTTCCCACGGATGAGGAGCACATCGCTGAAG 1475
Query 359 CTATTTGCGCTGCAACAGATGTGATTGCAGGATCTGGTAAAGGGGTCTCAGACGCTCCAT 418
|||| | | || | | | | |||||||||||| ||||||||||||||||||||||
Sbjct 1474 CTATCT--G-TG---C---TAT-ACTGCAGGATCTGGCAAAGGGGTCTCAGACGCTCCAT 1425
Query 419 TGACCCTCCATGTGAAGAAGGCTGGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAA 478
||||||||||||| ||||||||||| || ||| |||||||||||||||||||||| || |
Sbjct 1424 TGACCCTCCATGTTAAGAAGGCTGGGGTCCCATATCTTACCATGGTCGATCTTCCCGGTA 1365
Query 479 TAACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGATCTCTTCAATGA 538
||||||||| |||||||||||||| ||||| |||||||| || ||||| ||| ||||
Sbjct 1364 TAACTCGAGG-CCAGTGAATGGACAACCGGAGAATATTTACGAACAGATTTCTGGGATGA 1306
Query 539 TCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAACGTTCTGTCAGCTACGGTGG 598
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || |
Sbjct 1305 TCATGAAGTACATCGAGCCACAAGAATCAATAATCCTCAATGTTCTGTCAGCTACAGTCG 1246
Query 599 ATTTCACCACATGTGAATCCATTCGCATGT 628
| |||||||| ||||||||||| || ||||
Sbjct 1245 ACTTCACCACCTGTGAATCCATCCGTATGT 1216
Score = 346 bits (187), Expect = 5e-94
Identities = 267/305 (88%), Gaps = 7/305 (2%)
Strand=Plus/Minus
Query 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCT-C-C-TTCTCTTGCCATTGTT 57
||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||
Sbjct 1883 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTTCTCCTTCTCTTGCAATTGTC 1824
Query 58 GAAGC-ACATCCTCATGACAACAAAGCTGTTGTTCCCATTGAAGCACCAAT-AGTATCAT 115
| || | ||||||||||||||| || ||||||||||| |||||||| || | |||| |
Sbjct 1823 CAGGCGA-ATCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTA-TATCTT 1766
Query 116 CGTATAATGACCGCATCAGGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATG 175
| ||||| || | || ||||||||||||||||| |||||| | ||||||||||||||||
Sbjct 1765 CATATAACGATAGGATTAGGCCGTTGCTTGACACGGTTGACCGTCTAAGGAACCTCAATG 1706
Query 176 TGATGAGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGA 235
||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1705 TGATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGA 1646
Query 236 AGTCAAGTGTTCTTGAATCCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCA 295
|||||||||| || || || ||||| ||||||||| | |||||||| |||||||||||||
Sbjct 1645 AGTCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCA 1586
Query 296 CTAGG 300
|||||
Sbjct 1585 CTAGG 1581
> AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family
| chr1:22302486-22304985 REVERSE LENGTH=2031
Length=2031
Score = 1447 bits (783), Expect = 0.0
Identities = 1409/1708 (82%), Gaps = 55/1708 (3%)
Strand=Plus/Plus
Query 300 GATTTGGCTTGAGTACAGTGACAAAGTTGTTCCCACAGATGAAGAACACATCACTGAAGC 359
||| ||||| |||||| |||||||| ||||||| |||||||| |||||||| || || |
Sbjct 348 GATCTGGCTGGAGTACGGTGACAAAATTGTTCCTACAGATGAGGAACACATTGCTCAAAC 407
Query 360 TATTTGCGCTGCAACAGATGTGATTGCAGGATCTGGTAAAGGGGTCTCAGACGC-TCCAT 418
|||||| || || ||||| ||||| || |||||||| |||||||| |||||| | || |
Sbjct 408 TATTTGTGCAGCTACAGACGTGATAGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCT 467
Query 419 TGACCCTCCATGTGAAGAAGGCTGGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAA 478
| || |||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||
Sbjct 468 T-ACGCTCCATGTGAAGAAGGCTGGTGTTCCAGATATTACTATGGTTGATCTCCCTGGAA 526
Query 479 TAACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGATCTCTTCA--AT 536
|||| || ||||| ||||| |||||||| |||||||||||||| ||||| | | || ||
Sbjct 527 TAACCCGTGTTCCTGTGAACGGACAGCCTGAAAATATTTATGAACAGAT-T-TCCAGGAT 584
Query 537 GATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAACGTTCTGTCAGCTACGGT 596
| | |||||||| || ||||| ||||||||||| || ||||| ||||||||||| || ||
Sbjct 585 GGTTATGAAGTATATTGAGCCACAAGAATCAATCATACTCAATGTTCTGTCAGCGACAGT 644
Query 597 GGATTTCACCACATGTGAATCCATTC-GCATGTC-AAGACAAGTTGACAAAACCGGTGAG 654
|||||||| || |||||||||| || | ||||| || ||| || |||||||||||||||
Sbjct 645 TGATTTCACTACTTGTGAATCCA-TCAGAATGTCTAA-ACAGGTGGACAAAACCGGTGAG 702
Query 655 CGGACTTTGGCTGTTGTCACAAAGGCAGACATGGCTCCTGAAGGACTCCTGCAGAAAGTA 714
|||||| ||||||| ||||||||||| ||||||||||||||||| || || |||||||||
Sbjct 703 CGGACTCTGGCTGTAGTCACAAAGGCTGACATGGCTCCTGAAGGGCTTCTCCAGAAAGTA 762
Query 715 ACAGCAGATGATGTGAGTATAGGTCTAGGTTACGTCTGTGTCAGAAACCGCATAGGCGAA 774
|| ||||||||||||||||| || || ||||| |||||||| |||||||| ||||| ||
Sbjct 763 ACTGCAGATGATGTGAGTATCGGACTTGGTTATGTCTGTGTTAGAAACCGGATAGGGGAG 822
Query 775 GAGTCATATGAAGAAGCAAGAATTCAAGAAGAGTTACTTTTCAGGACTCATCCAATGCTA 834
|| | ||||||||||| |||| ||||||||||||||||||||||| || || |||||
Sbjct 823 GAAACCTATGAAGAAGCTCGAATGCAAGAAGAGTTACTTTTCAGGACCCACCCGATGCT- 881
Query 835 AGC-TTGATCGATGATGACATTGTGGG-AGTCCCTGTTTTAGCTCAGAAGCTAATGTTTA 892
| ||||| ||||||| |||||||| | |||| || |||||||||||||| | | |
Sbjct 882 TTCAATGATCAATGATGAGATTGTGGGTA-TCCCCGTCTTAGCTCAGAAGCTGACGCAGA 940
Query 893 TCCAAGCAACGATGATTTCCCGCTGTTTGCCTGAAATTGTTCGCAAGATCAATCACAAGA 952
|||| | || |||||| || | |||||||| ||||| | | ||||| ||| ||||
Sbjct 941 TCCAGGGAATGATGATATCTAGGTGTTTGCCGGAAATCGAAAGGAAGATAAATGTGAAGA 1000
Query 953 TGGAAA-CCGCTGTCCTTGAGTTGAACAAGTTACCGATGGTAATGGCTTCTACCGGAGAA 1011
|||||| | | |||||| ||||| |||||| | || || || ||||||||||| || |||
Sbjct 1001 TGGAAATCAG-TGTCCTGGAGTTTAACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAA 1059
Query 1012 GCATTGATGGCAT-TGATGGACATCATTGGTTCTGCCAAGGAGTCACT-CTTAAGAATTC 1069
||||| ||| | | | ||||| ||||||||||||||||||||||| || | ||||||| |
Sbjct 1060 GCATTAATGTC-TCTAATGGATATCATTGGTTCTGCCAAGGAGTCTCTAC-TAAGAATCC 1117
Query 1070 TCGTTCAAGGAGATTTCTCTGAATTCCCTGATGATCAGAACATGCATTGTACTGCTCGCT 1129
| || || |||||||||||||||| |||| | ||||| || |||||||| || |||||||
Sbjct 1118 TTGTCCATGGAGATTTCTCTGAATACCCTAACGATCAAAAGATGCATTGCACAGCTCGCT 1177
Query 1130 TGGCTGATATGTTAAGCCAATTCTCCGATAATCTGCAAGCCA-AGCCAGAGGACGTGAC- 1187
||||||| ||||||| || |||||| || ||||||| || || |||| | | ||||||
Sbjct 1178 TGGCTGAAATGTTAAACCGATTCTCAGACAATCTGC-AGGCACAGCCTCAAGCCGTGACA 1236
Query 1188 --CGAGTTCTTAATGGACGAAATC-AAGATCCTT-GACGAGTGCAAGTGTGTTGGATTGC 1243
|||||||| ||||| |||||| ||| | ||| || ||| |||| ||| | |||||||
Sbjct 1237 GAAGAGTTCTTGATGGATGAAATCAAAG-T-CTTAGAAGAGCGCAAATGTATCGGATTGC 1294
Query 1244 CCAATTTCATCCCGAGATCAGCTTTCTTGGCCATTCTCTCACAACACGTTGA--GAATAT 1301
| ||||| || || ||||| ||||||| || || || |||||||| || || | |||
Sbjct 1295 CTAATTTTATACCAAGATCTTCTTTCTTAGCAATCCTTTCACAACATGTGGATGGGATA- 1353
Query 1302 TCATGTCAAGCCAGTGGAGTTCATC-AGGAAGATCTGGGACTACATTGAAGTTGTTCTCT 1360
|| | ||||||||| ||||||||| ||| |||| ||||||||||||||||| ||||| |
Sbjct 1354 -CAAGACAAGCCAGTTGAGTTCATCAAGG-AGATATGGGACTACATTGAAGTCGTTCTGT 1411
Query 1361 CATCAGTCATTACCA-AGTACTCGGAAAAC-TTCCCGCAGATCCAATCAGCCATCAAACG 1418
||||||||||||| | | || || || ||| ||||| ||||| ||||| |||||||| |
Sbjct 1412 CATCAGTCATTACGACA-TATTCTGACAACTTTCCC-CAGATTCAATCCTCCATCAAAAG 1469
Query 1419 TGCCGGTCGAAATCTAATCACCAAGATC-AAGGAACAATCAGTAGAGC-GAGTGATGGAG 1476
|| ||||| |||||||| | || || | ||||||| || || || | |||| || |||
Sbjct 1470 GGCTGGTCGTAATCTAATGAGCAGGA-CTAAGGAACGTTCCGT-GAACTGAGTAATTGAG 1527
Query 1477 ATAGTTGAAATGGAGAAGCTGACGGATTACACATGTAACCCTGAGTACATGACGTCTTGG 1536
|| ||||| ||||||||||| || ||||||||||||||||| || |||||||| ||||||
Sbjct 1528 ATCGTTGAGATGGAGAAGCTTACCGATTACACATGTAACCCAGATTACATGACTTCTTGG 1587
Query 1537 ACCCAGAAAAC-TGCTGAACAACAAAACTTCATTC-ATGCTGTGTTGTACGATGCGAA-A 1593
|| ||||| || || ||| |||||||||| || || |||||||| |||||| ||| |
Sbjct 1588 ACTCAGAAGACAACCT-CACAGCAAAACTTCA-TCAATTCTGTGTTGCACGATGAGAATA 1645
Query 1594 AAGCCTGAACACTTCT-CGTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGGAA 1652
|| |||| | | || | | ||| ||||||| ||| ||||||||||||||||||| || ||
Sbjct 1646 AA-CCTG-AGAATTTTGCTTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAA 1703
Query 1653 GTATCACGCTCATCTT-CTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCATACT 1711
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1704 GTATCACGCTCAT-TTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACT 1762
Query 1712 GGAGGATCGTCTTGCGTAGGATTGTTGACAGCCTTGCGCTGTATCTTCAACTATCTGTGA 1771
||| |||||| ||||| ||| |||| || | |||||| || || |||||| | |||||||
Sbjct 1763 GGACGATCGTATTGCGAAGGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGA 1822
Query 1772 A-ATATCTCGTGAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGA 1830
| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1823 AGA-ATCTGGTCAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGA 1881
Query 1831 GCTGGCGGAGGAGTGGAGAGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAG 1890
|||||||||||| | || |||||||||||||| || ||||||||||| ||||||||||||
Sbjct 1882 GCTGGCGGAGGAATAGATAGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAG 1941
Query 1891 AAGCTTAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTT 1950
||||| ||||| ||| |||||||||||||||| |||||||| | |||||| |||||||||
Sbjct 1942 AAGCTGAAGAATAGTCTCAAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTT 2001
Query 1951 GATCAGAGTTCTGGGTACGGAGATCGTT 1978
||||||| |||| |||| |||||||
Sbjct 2002 GATCAGAACTCTGTATACGCTGATCGTT 2029
Score = 331 bits (179), Expect = 1e-89
Identities = 261/301 (87%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTCCTTCTCTTGCCATTGTTGAA 60
|||||| ||||||| ||||||| ||||||||| ||| |||||||||| || ||||| |
Sbjct 1 ATGGGACGTAGTAACAAGCATGATGTCACTAGTACCACTCCTTCTCTGGCAATTGTCCAG 60
Query 61 GC-ACATCCTCATGACAACAAAGCTGTTGTTCCCATTGAAGCACCAATAGTATCATCGTA 119
|| | ||||||| | |||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct 61 GCGA-ATCCTCACCCCCACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTA 119
Query 120 TAATGACCGCATCAGGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATGTGAT 179
||||||| |||||||||||||||||||||||| |||| ||| |||||| | ||||||||
Sbjct 120 CAATGACCACATCAGGCCGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGAT 179
Query 180 G-AGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGAAGT 238
| | ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 180 GCA-AGAAGGGATTCAGCTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGT 238
Query 239 CAAGTGTTCTTGAATCCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTA 298
| ||||| || || || ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 239 CGAGTGTCCTCGAGTCGTTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTA 298
Query 299 G 299
|
Sbjct 299 G 299
> AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156
FORWARD LENGTH=2305
Length=2305
Score = 1380 bits (747), Expect = 0.0
Identities = 1331/1609 (83%), Gaps = 56/1609 (3%)
Strand=Plus/Minus
Query 378 TGTGATTGCAGGATCTGGTAAAGGGGTCTCAGACGC-TCCATTGACCCTCCATGTGAAGA 436
|||| ||||||||||||| |||||||| |||||| | || || || |||||||||||||
Sbjct 1599 TGTG-TTGCAGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGA 1542
Query 437 AGGCTGGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAATAACTCGAGTTCCAGTGA 496
||||||||||||||||| |||| ||||| ||||| ||||||||||| || ||||| ||||
Sbjct 1541 AGGCTGGTGTTCCAGATATTACTATGGTTGATCTCCCTGGAATAACCCGTGTTCCTGTGA 1482
Query 497 ATGGACAGCCGGAAAATATTTATGAGCAGATCTCTTCA--ATGATCATGAAGTACATCGA 554
| |||||||| |||||||||||||| ||||| | | || ||| | |||||||| || ||
Sbjct 1481 ACGGACAGCCTGAAAATATTTATGAACAGAT-T-TCCAGGATGGTTATGAAGTATATTGA 1424
Query 555 GCCTCAAGAATCAATAATCCTCAACGTTCTGTCAGCTACGGTGGATTTCACCACATGTGA 614
||| ||||||||||| || ||||| ||||||||||| || || |||||||| || |||||
Sbjct 1423 GCCACAAGAATCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGA 1364
Query 615 ATCCATTC-GCATGTC-AAGACAAGTTGACAAAACCGGTGAGCGGACTTTGGCTGTTGTC 672
||||| || | ||||| || ||| || ||||||||||||||||||||| ||||||| |||
Sbjct 1363 ATCCA-TCAGAATGTCTAA-ACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTC 1306
Query 673 ACAAAGGCAGACATGGCTCCTGAAGGACTCCTGCAGAAAGTAACAGCAGATGATGTGAGT 732
|||||||| ||||||||||||||||| || || ||||||||||| |||||||||||||||
Sbjct 1305 ACAAAGGCTGACATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGT 1246
Query 733 ATAGGTCTAGGTTACGTCTGTGTCAGAAACCGCATAGGCGAAGAGTCATATGAAGAAGCA 792
|| || || ||||| |||||||| |||||||| ||||| || || | |||||||||||
Sbjct 1245 ATCGGACTTGGTTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCT 1186
Query 793 AGAATTCAAGAAGAGTTACTTTTCAGGACTCATCCAATGCTAAGC-TTGATCGATGATGA 851
|||| ||||||||||||||||||||||| || || ||||| | ||||| |||||||
Sbjct 1185 CGAATGCAAGAAGAGTTACTTTTCAGGACCCACCCGATGCT-TTCAATGATCAATGATGA 1127
Query 852 CATTGTGGG-AGTCCCTGTTTTAGCTCAGAAGCTAATGTTTATCCAAGCAACGATGATTT 910
|||||||| | |||| || |||||||||||||| | | ||||| | || |||||| |
Sbjct 1126 GATTGTGGGTA-TCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATGATGATAT 1068
Query 911 CCCGCTGTTTGCCTGAAATTGTTCGCAAGATCAATCACAAGATGGAAA-CCGCTGTCCTT 969
| | |||||||| ||||| | | ||||| ||| |||||||||| | | ||||||
Sbjct 1067 CTAGGTGTTTGCCGGAAATCGAAAGGAAGATAAATGTGAAGATGGAAATCAG-TGTCCTG 1009
Query 970 GAGTTGAACAAGTTACCGATGGTAATGGCTTCTACCGGAGAAGCATTGATGGCAT-TGAT 1028
||||| |||||| | || || || ||||||||||| || |||||||| ||| | | | ||
Sbjct 1008 GAGTTTAACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTC-TCTAAT 950
Query 1029 GGACATCATTGGTTCTGCCAAGGAGTCACT-CTTAAGAATTCTCGTTCAAGGAGATTTCT 1087
||| ||||||||||||||||||||||| || | ||||||| || || || ||||||||||
Sbjct 949 GGATATCATTGGTTCTGCCAAGGAGTCTCTAC-TAAGAATCCTTGTCCATGGAGATTTCT 891
Query 1088 CTGAATTCCCTGATGATCAGAACATGCATTGTACTGCTCGCTTGGCTGATATGTTAAGCC 1147
|||||| |||| | ||||| || |||||||| || |||||||||||||| ||||||| ||
Sbjct 890 CTGAATACCCTAACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACC 831
Query 1148 AATTCTCCGATAATCTGCAAGCCA-AGCCAGAGGACGTGAC---CGAGTTCTTAATGGAC 1203
|||||| || ||||||| || || |||| | | |||||| |||||||| |||||
Sbjct 830 GATTCTCAGACAATCTGC-AGGCACAGCCTCAAGCCGTGACAGAAGAGTTCTTGATGGAT 772
Query 1204 GAAATC-AAGATCCTT-GACGAGTGCAAGTGTGTTGGATTGCCCAATTTCATCCCGAGAT 1261
|||||| ||| | ||| || ||| |||| ||| | |||||||| ||||| || || ||||
Sbjct 771 GAAATCAAAG-T-CTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGAT 714
Query 1262 CAGCTTTCTTGGCCATTCTCTCACAACACGTTGA--GAATATTCATGTCAAGCCAGTGGA 1319
| ||||||| || || || |||||||| || || | ||| || | ||||||||| ||
Sbjct 713 CTTCTTTCTTAGCAATCCTTTCACAACATGTGGATGGGATA--CAAGACAAGCCAGTTGA 656
Query 1320 GTTCATC-AGGAAGATCTGGGACTACATTGAAGTTGTTCTCTCATCAGTCATTACCA-AG 1377
||||||| ||| |||| ||||||||||||||||| ||||| |||||||||||||| | |
Sbjct 655 GTTCATCAAGG-AGATATGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACA- 598
Query 1378 TACTCGGAAAAC-TTCCCGCAGATCCAATCAGCCATCAAACGTGCCGGTCGAAATCTAAT 1436
|| || || ||| ||||| ||||| ||||| |||||||| | || ||||| ||||||||
Sbjct 597 TATTCTGACAACTTTCCC-CAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAAT 539
Query 1437 CACCAAGATC-AAGGAACAATCAGTAGAGC-GAGTGATGGAGATAGTTGAAATGGAGAAG 1494
| || || | ||||||| || || || | |||| || ||||| ||||| |||||||||
Sbjct 538 GAGCAGGA-CTAAGGAACGTTCCGT-GAACTGAGTAATTGAGATCGTTGAGATGGAGAAG 481
Query 1495 CTGACGGATTACACATGTAACCCTGAGTACATGACGTCTTGGACCCAGAAAAC-TGCTGA 1553
|| || ||||||||||||||||| || |||||||| |||||||| ||||| || ||
Sbjct 480 CTTACCGATTACACATGTAACCCAGATTACATGACTTCTTGGACTCAGAAGACAACCT-C 422
Query 1554 ACAACAAAACTTCATTC-ATGCTGTGTTGTACGATGCGAA-AAAGCCTGAACACTTCT-C 1610
||| |||||||||| || || |||||||| |||||| ||| ||| |||| | | || | |
Sbjct 421 ACAGCAAAACTTCA-TCAATTCTGTGTTGCACGATGAGAATAAA-CCTG-AGAATTTTGC 365
Query 1611 GTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGGAAGTATCACGCTCATCTT-C 1669
||| ||||||| ||| ||||||||||||||||||| || ||||||||||||||| || |
Sbjct 364 TTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAAGTATCACGCTCAT-TTGC 306
Query 1670 TGCAACAAGCGTTTGATATGAAGATGAGGATCACATCATACTGGAGGATCGTCTTGCGTA 1729
||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
Sbjct 305 TGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACTGGACGATCGTATTGCGAA 246
Query 1730 GGATTGTTGACAGCCTTGCGCTGTATCTTCAACTATCTGTGAA-ATATCTCGTGAACAGT 1788
|| |||| || | |||||| || || |||||| | |||||||| | |||| || ||||||
Sbjct 245 GGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAAGA-ATCTGGTCAACAGT 187
Query 1789 CAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAGTGGAG 1848
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 186 CAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAATAGAT 127
Query 1849 AGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAGAAGCTTAAGAACAGTATC 1908
|||||||||||||| || ||||||||||| ||||||||||||||||| ||||| ||| ||
Sbjct 126 AGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAAGCTGAAGAATAGTCTC 67
Query 1909 AAGCTTCTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCAGA 1957
|||||||||||||| |||||||| | |||||| ||||||||||||||||
Sbjct 66 AAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGATCAGA 18
Score = 331 bits (179), Expect = 1e-89
Identities = 261/301 (87%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTCCTTCTCTTGCCATTGTTGAA 60
|||||| ||||||| ||||||| ||||||||| ||| |||||||||| || ||||| |
Sbjct 2134 ATGGGACGTAGTAACAAGCATGATGTCACTAGTACCACTCCTTCTCTGGCAATTGTCCAG 2075
Query 61 GC-ACATCCTCATGACAACAAAGCTGTTGTTCCCATTGAAGCACCAATAGTATCATCGTA 119
|| | ||||||| | |||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct 2074 GCGA-ATCCTCACCCCCACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTA 2016
Query 120 TAATGACCGCATCAGGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATGTGAT 179
||||||| |||||||||||||||||||||||| |||| ||| |||||| | ||||||||
Sbjct 2015 CAATGACCACATCAGGCCGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGAT 1956
Query 180 G-AGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGAAGT 238
| | ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1955 GCA-AGAAGGGATTCAGCTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGT 1897
Query 239 CAAGTGTTCTTGAATCCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTA 298
| ||||| || || || ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1896 CGAGTGTCCTCGAGTCGTTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTA 1837
Query 299 G 299
|
Sbjct 1836 G 1836
> AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr1:22299797-22301167
FORWARD LENGTH=906
Length=906
Score = 688 bits (372), Expect = 0.0
Identities = 505/570 (89%), Gaps = 5/570 (1%)
Strand=Plus/Plus
Query 291 CTGCACTAG-GATTTGGCTTGAGTACAGTGACAAAGTTGTTCCCACAGATGAAGAACACA 349
||| || || ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 326 CTGAACCAGAGATTTGGCTGGAATACAGTGACAAAGTTGTTCCCACAGATGAAGAACACG 385
Query 350 TCACTGAAGCTATTTGCGCTGCAACAGATGTGATTGCAGGATCTGGTAAAGGGGTCTCAG 409
|| ||||||||||||| |||||||||||||||||||| ||| ||||| |||| || ||||
Sbjct 386 TCGCTGAAGCTATTTGTGCTGCAACAGATGTGATTGCTGGAACTGGTGAAGGAGTTTCAG 445
Query 410 ACGCTCCATTGACCCTCCA-TGTGAAGAAG-GCTGGTGTTCCAGATCTTACCATGGTCGA 467
|| |||| ||||||| || ||| |||||| | ||| ||||||||||| ||||||||
Sbjct 446 ACACTCCCCTGACCCT-CAGTGTTAAGAAGAAC-AATGTCCCAGATCTTACGATGGTCGA 503
Query 468 TCTTCCTGGAATAACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGAT 527
|||||| || |||||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct 504 TCTTCCCGGTATAACTCGAGTTCCAGTGAATGGACAACCGGAGAATATTTACGAACAGAT 563
Query 528 CTCTTCAATGATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAACGTTCTGTC 587
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 564 TTCTAGGATGATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAATGTTCTGTC 623
Query 588 AGCTACGGTGGATTTCACCACATGTGAATCCATTCGCATGTCAAGACAAGTTGACAAAAC 647
||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 624 AGCTACGGTCGACTTCACCACATGCGAATCCATTCGCATGTCAAGACAAGTTGACAAAAC 683
Query 648 CGGTGAGCGGACTTTGGCTGTTGTCACAAAGGCAGACATGGCTCCTGAAGGACTCCTGCA 707
||||| |||||| |||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 684 TGGTGAACGGACTCTGGCTGTTGTGACAAAGGCTGACATGGCTCCTGAAGGTCTCCTGCA 743
Query 708 GAAAGTAACAGCAGATGATGTGAGTATAGGTCTAGGTTACGTCTGTGTCAGAAACCGCAT 767
||||||||| ||||||||||||||||| || ||||||||| ||||||| |||||||| ||
Sbjct 744 GAAAGTAACTGCAGATGATGTGAGTATCGGACTAGGTTACATCTGTGTTAGAAACCGTAT 803
Query 768 AGGCGAAGAGTCATATGAAGAAGCAAGAATTCAAGAAGAGTTACTTTTCAGGACTCATCC 827
||| |||||| ||||||||||||| || | || ||||| ||||| ||||||||||||||
Sbjct 804 AGGAGAAGAGACATATGAAGAAGCTAGGGTGCAGGAAGATTTACTCTTCAGGACTCATCC 863
Query 828 AATGCTAAGCTTGATCGATGATGACATTGT 857
| ||||||| ||||| |||| |||||||||
Sbjct 864 ACTGCTAAGTTTGATTGATGGTGACATTGT 893
Score = 278 bits (150), Expect = 2e-73
Identities = 190/210 (90%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 91 CCCATTGAAGCACCAATAGTATCATCGTATAATGACCGCATCAGGCCGTTGCTTGACACT 150
||||||||||||||||| |||||||| || |||||||| ||| |||| ||||||||||||
Sbjct 79 CCCATTGAAGCACCAATTGTATCATCTTACAATGACCGGATCCGGCCATTGCTTGACACT 138
Query 151 GTTGACAGGCTAAGGAACCTCAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTT 210
|| ||||| | || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 139 GTCGACAGATTGAGAAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTG 198
Query 211 GTGGTTGGAGACCAGTCCTCAGGGAAGTCAAGTGTTCTTGAATCCTTGGCTGGAATCAGT 270
||||||||||||||||| ||||||||||| ||||||||||| || ||||| ||||||| |
Sbjct 199 GTGGTTGGAGACCAGTCTTCAGGGAAGTCGAGTGTTCTTGAGTCGTTGGCAGGAATCAAT 258
Query 271 TTGCCTCGTGGGCAAGGAATCTGCACTAGG 300
||||||||||| ||||||||||||||||||
Sbjct 259 TTGCCTCGTGGACAAGGAATCTGCACTAGG 288
> AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305
REVERSE LENGTH=1669
Length=1669
Score = 409 bits (221), Expect = 6e-113
Identities = 297/334 (89%), Gaps = 4/334 (1%)
Strand=Plus/Minus
Query 384 TGCAGGATCTGGTAAAGGGGTCTCAGACGCTCCATTGACCCTCCA-TGTGAAGAAG-GCT 441
||||||| ||||| |||| || |||||| |||| ||||||| || ||| |||||| |
Sbjct 529 TGCAGGAACTGGTGAAGGAGTTTCAGACACTCCCCTGACCCT-CAGTGTTAAGAAGAAC- 472
Query 442 GGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAATAACTCGAGTTCCAGTGAATGGA 501
||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 471 AATGTCCCAGATCTTACGATGGTCGATCTTCCCGGTATAACTCGAGTTCCAGTGAATGGA 412
Query 502 CAGCCGGAAAATATTTATGAGCAGATCTCTTCAATGATCATGAAGTACATCGAGCCTCAA 561
|| ||||| |||||||| || ||||| ||| |||||||||||||||||||||||||||
Sbjct 411 CAACCGGAGAATATTTACGAACAGATTTCTAGGATGATCATGAAGTACATCGAGCCTCAA 352
Query 562 GAATCAATAATCCTCAACGTTCTGTCAGCTACGGTGGATTTCACCACATGTGAATCCATT 621
||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||
Sbjct 351 GAATCAATAATCCTCAATGTTCTGTCAGCTACGGTCGACTTCACCACATGCGAATCCATT 292
Query 622 CGCATGTCAAGACAAGTTGACAAAACCGGTGAGCGGACTTTGGCTGTTGTCACAAAGGCA 681
|||||||||||||||||||||||||| ||||| |||||| |||||||||| ||||||||
Sbjct 291 CGCATGTCAAGACAAGTTGACAAAACTGGTGAACGGACTCTGGCTGTTGTGACAAAGGCT 232
Query 682 GACATGGCTCCTGAAGGACTCCTGCAGAAAGTAA 715
||||||||||||||||| ||||||||||||||||
Sbjct 231 GACATGGCTCCTGAAGGTCTCCTGCAGAAAGTAA 198
Score = 278 bits (150), Expect = 2e-73
Identities = 190/210 (90%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 91 CCCATTGAAGCACCAATAGTATCATCGTATAATGACCGCATCAGGCCGTTGCTTGACACT 150
||||||||||||||||| |||||||| || |||||||| ||| |||| ||||||||||||
Sbjct 1335 CCCATTGAAGCACCAATTGTATCATCTTACAATGACCGGATCCGGCCATTGCTTGACACT 1276
Query 151 GTTGACAGGCTAAGGAACCTCAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTT 210
|| ||||| | || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1275 GTCGACAGATTGAGAAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTG 1216
Query 211 GTGGTTGGAGACCAGTCCTCAGGGAAGTCAAGTGTTCTTGAATCCTTGGCTGGAATCAGT 270
||||||||||||||||| ||||||||||| ||||||||||| || ||||| ||||||| |
Sbjct 1215 GTGGTTGGAGACCAGTCTTCAGGGAAGTCGAGTGTTCTTGAGTCGTTGGCAGGAATCAAT 1156
Query 271 TTGCCTCGTGGGCAAGGAATCTGCACTAGG 300
||||||||||| ||||||||||||||||||
Sbjct 1155 TTGCCTCGTGGACAAGGAATCTGCACTAGG 1126
Score = 167 bits (90), Expect = 4e-40
Identities = 131/150 (87%), Gaps = 6/150 (4%)
Strand=Plus/Minus
Query 1775 ATCTCGTGAACAGTCAGTTTCA-GAAGGAGATTGTGGCGGAGA-TGGTGGATCCAAG-AG 1831
|||| ||||||| ||| || || | ||||||| |||||||| | ||||| || |||| ||
Sbjct 147 ATCTTGTGAACATTCAATTACATG-AGGAGATCGTGGCGGA-ATTGGTGAATTCAAGTAG 90
Query 1832 CTGGCGGAGGAGTGGAGAGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAGA 1891
||| |||| ||| |||| |||||||||||||| |||||||||||| |||||||||||||
Sbjct 89 -TGGAGGAGTAGTTGAGAAGATGCTGGAGGAGTATCCGTCGGTGGCGAGCAAGAGGGAGA 31
Query 1892 AGCTTAAGAACAGTATCAAGCTTCTGAAGG 1921
||||||||||||||||||||||||||||||
Sbjct 30 AGCTTAAGAACAGTATCAAGCTTCTGAAGG 1
Score = 134 bits (72), Expect = 4e-30
Identities = 89/97 (92%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 291 CTGCACTAG-GATTTGGCTTGAGTACAGTGACAAAGTTGTTCCCACAGATGAAGAACACA 349
||| || || ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1088 CTGAACCAGAGATTTGGCTGGAATACAGTGACAAAGTTGTTCCCACAGATGAAGAACACG 1029
Query 350 TCACTGAAGCTATTTGCGCTGCAACAGATGTGATTGC 386
|| ||||||||||||| ||||||||||||||||||||
Sbjct 1028 TCGCTGAAGCTATTTGTGCTGCAACAGATGTGATTGC 992
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98091864930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5