BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg338870
Length=705
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66550.1 | Symbols: WRKY67, ATWRKY67 | WRKY DNA-binding prot... 556 7e-158
AT1G66560.1 | Symbols: WRKY64, ATWRKY64 | WRKY DNA-binding prot... 483 1e-135
AT1G66600.1 | Symbols: WRKY63, ATWRKY63, ABO3 | ABA overly sens... 357 8e-98
> AT1G66550.1 | Symbols: WRKY67, ATWRKY67 | WRKY DNA-binding protein
67 | chr1:24828537-24829589 FORWARD LENGTH=765
Length=765
Score = 556 bits (301), Expect = 7e-158
Identities = 449/518 (87%), Gaps = 20/518 (4%)
Strand=Plus/Plus
Query 195 AAAACTTTGTGGAGCACAAGGTTTAGTGAATTACAGA-GATGATTCCCCGATTCCGTGTC 253
||||||||||| |||| |||||||||||||||||| | | ||||||| || | ||| |
Sbjct 261 AAAACTTTGTGTAGCAGAAGGTTTAGTGAATTACA-ATCACGATTCCCGGACTATGTGCC 319
Query 254 CCAATGATGGCTTTGCCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCACCGCACC 313
||||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct 320 CCAATGATGGCTTCACCTGGAGGAAATATGGACAAAAAACCATTAAAGCCTCAGCGCACA 379
Query 314 AAAGGTGTTACTATCGGTGTACCTATGCAAAAGACCAAAATTGCAATGCTACAAAGCGGG 373
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 380 AAAGGTGTTACTATCGGTGTACCTATGCAAAAGACCAAAACTGCAATGCTACAAAGCGGG 439
Query 374 TGCAGAAGATCAAAGACAACCCTCCAGTGTACAGAACCACGTA-TATGGGAAAACATGTG 432
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct 440 TGCAGAAGATCAAAGACAACCCTCCAGTGTACAGAACCACTTACT-TGGGAAAACATGTG 498
Query 433 TGTACTGCTTCTGTAGGTCATGATGATACACACAGTTCCAAAATGATCC-AGTTCGACCA 491
|||| |||| || || ||||||||||||| | ||||||| ||||| | | ||||||||
Sbjct 499 TGTAAAGCTTTTGCAGTTCATGATGATACATATAGTTCCACGATGATTCGA-TTCGACCA 557
Query 492 AGTTGTTTCTGAATTGGTTATGCCTCAGCTCACAACGATTGACCACCAAGTAATTACCAT 551
||||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct 558 AGTTGTTCCTGAACCGATTATGCCGCAGCTCACAACAATTGACCACCAAGTAATTACCGT 617
Query 552 GGAGGACAAAGTCA-CACA-CTATATCATGAACCAAGAATGTGATATCGATATTAATGAT 609
|||||| ||| || || | | ||||||||||||||||||||||||| || | ||||
Sbjct 618 GGAGGA-AAACTCCGCAGAAC-ATATCATGAACCAAGAATGTGATAT---TA--A-TGAT 669
Query 610 TATTTGGTGGGTTATGACCAAATTTGGG-TGAATGAATTTCCCCCATTTCCATC-AGACG 667
|||||||||| | |||||| | |||||| | | | |||||||||| |||||||| || |
Sbjct 670 TATTTGGTGGATGATGACCCATTTTGGGCT-AGTCAATTTCCCCCGTTTCCATCGAGT-G 727
Query 668 ACACAATGTTTTTGGACAACATCGCTGCTTTTGATTAG 705
|||||||||| ||||| ||||| ||||||||||||||
Sbjct 728 ACACAATGTTCTTGGAAAACATTTCTGCTTTTGATTAG 765
Score = 316 bits (171), Expect = 1e-85
Identities = 187/195 (96%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 1 ATGGTTTCCAACATTGATCACAAGGCTATGGAAGCACTCCTCCGTGGACAAGGATGCGCT 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGGTTTCCAACATTGATCACAAGGCTATGGAAGCACTCCTCCGTGGCCAAGGATGCGCT 60
Query 61 AACAGCCTCAAGATTCTCCTCGAAAACGGCGAAATAAGCTCAGTTTCAACAGAACCACTC 120
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 61 AACAACCTCAAGATTCTCCTTGAAAACGGCGAAATAAGCTCAGTTTCAACAGAACCACTC 120
Query 121 ATCAACACCATTCTCGATTCTTTCTCGCTTGCTCTGTCTTTTGTGGATTCTCCTAATCCT 180
||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
Sbjct 121 ATCCACACCATTCTCGATTCTTTCTCACTTGCTCTGTCTTTTATGGATTCTCCTAATCAT 180
Query 181 CCACCATACTATGAA 195
||||||||| |||||
Sbjct 181 CCACCATACCATGAA 195
> AT1G66560.1 | Symbols: WRKY64, ATWRKY64 | WRKY DNA-binding protein
64 | chr1:24833579-24834631 FORWARD LENGTH=750
Length=750
Score = 483 bits (261), Expect = 1e-135
Identities = 434/517 (84%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 193 GAAAAACT-TTGTGGAGCACAAGGTTTAGTGAATTACAGAGATGATTCCCCGATTCCGTG 251
|||||| | || ||||||| ||| ||||| | |||||||||| || ||||||| ||| |
Sbjct 243 GAAAAAATATTATGGAGCAGAAGATTTAGAGTATTACAGAGACGAATCCCCGACTCCACG 302
Query 252 TCCCAATGATGGCTTTGCCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCACCGCA 311
||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 303 CCCCGATGACGGCTTCACCTGGAGGAAATATGGACAAAAAACTATCAAAACCTCACCGTA 362
Query 312 CCAAAGGTGTTACTATCGGTGTACCTATGCAAAAGACCAAAATTGCAATGCTACAAAGCG 371
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 363 CCAAAGGTGTTACTATCGGTGTACCTATGCAAAAGACCAAAACTGCAATGCTAGAAAGCG 422
Query 372 GGTGCAGAAGATCAAAGACAACCCTCCAGTGTACAGAACCACGTATATGGGAAAACATGT 431
|||||||| |||| |||| |||||||||||||||||||| || ||| |||||||||||||
Sbjct 423 GGTGCAGATGATCCAAGATAACCCTCCAGTGTACAGAACTACTTATTTGGGAAAACATGT 482
Query 432 GTGTACTGCT-TCTGTAGGTCATGATGATACACACAGTTCCAAAATGATCCAGTTCGACC 490
||||| ||| | || || ||||||||||||| | |||| ||||||| | |||||||
Sbjct 483 GTGTAAAGCTGT-TGCAGTTCATGATGATACATATGGTTCTGAAATGATAAAATTCGACC 541
Query 491 AAGTTGTTTCTGAATTGGTTATGCCTCAGCTCACAACGATTGACCACCAAGTAATTACCA 550
||||||| ||||||| |||||||||||| ||| |||| |||||| | |||| ||||||||
Sbjct 542 AAGTTGTATCTGAATCGGTTATGCCTCAACTCGCAACAATTGACGAACAAGCAATTACCA 601
Query 551 TGGAGGACAAAGTCACACACTATATCATGAACCAAGAATGTGATATCGATATTAATGATT 610
|||||||| ||| || | || ||||||||||||||||||||||||| || | |||||
Sbjct 602 TGGAGGACGAAGCCATAGACCATATCATGAACCAAGAATGTGATAT---TA--A-TGATT 655
Query 611 ATT-TGGTGGGTTATGACCAAATTTGGG-TGAATGAATTTCCCCCATTTCCATCAGACGA 668
|| || ||| | |||||| | |||||| | | | ||||||| |||||| |||| || ||
Sbjct 656 TTTCTG-TGGATGATGACCCATTTTGGGCT-AGTCAATTTCCTCCATTTTCATCGGAAGA 713
Query 669 CACAATGTTTTTGGACAACATCGCTGCTTTTGATTAG 705
|| |||||||| ||||| || ||| | ||||||||
Sbjct 714 CATTATGTTTTTTGACAATATTGCTAATCTTGATTAG 750
> AT1G66600.1 | Symbols: WRKY63, ATWRKY63, ABO3 | ABA overly sensitive
mutant 3 | chr1:24848320-24849364 FORWARD LENGTH=841
Length=841
Score = 357 bits (193), Expect = 8e-98
Identities = 411/514 (80%), Gaps = 24/514 (5%)
Strand=Plus/Plus
Query 200 TTTGTGGAGCACAAGGTTTAGTGAATTACAGAGATGATTCCCCGATTCCGTGTCC-CAAT 258
|||| |||| | ||||||||| || |||||||||||||||||| | ||| | || ||
Sbjct 337 TTTGCGGAGTAAAAGGTTTAGAGATTTACAGAGATGATTCCCCCAATCCCCG-CCTTGAT 395
Query 259 GATGGCTTTGCCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCACCGCACCAAAGG 318
|| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 396 GACGGCTTCACCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCTTTGTACCAAAGG 455
Query 319 TGTTACTATCGGTGTACCTATGCAAAAGACCAAAATTGCAATGCTACAAAGCGGGTGCAG 378
||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 456 TGTTACTATCGTTGTGCCTATGCAAAAGACCAAAACTGCTATGCTACAAAGCGGGTGCAG 515
Query 379 AAGATCAAAGACAACCCTCCAGTGTACAGAACCACGTATATGGGAAAACATGTGTGTACT 438
| |||| |||||| |||||||| ||||||||||| ||| ||||| ||||| ||||
Sbjct 516 ATGATCCAAGACAGTCCTCCAGTTTACAGAACCACTTATTTGGGACAACATACATGTAAA 575
Query 439 GC-TTCTGTAGGT-CATGATGATACACACAGTTCCAAAATGATCCAGTTCGACCAAGTTG 496
|| || || ||| |||||| |||| | | || ||||||| | |||||||||||||
Sbjct 576 GCCTT-TGG-GGTGCATGATAATACGTATGGCTCTGAAATGATAAACTTCGACCAAGTTG 633
Query 497 TTTCTGAATTGGTTATGCCTCAGCTCACAACGATTGACCACCAAG-TAATTAC-CATGGA 554
| ||||||| |||||||| ||| || |||| |||| | |||| | || | ||||||
Sbjct 634 TATCTGAATCGGTTATGCGTCAACTTGCAACAATTGGTGAACAAGCTG-TT-CTCATGGA 691
Query 555 GGACAAAG-TCACACACTATATCATGAACCAAGAATGTGATATCGATATTAATGATTATT 613
|||| ||| | | || | |||||||||||||||||| || ||||||||||||||||
Sbjct 692 GGACGAAGCT-A-AC-C-ATATCATGAACCAAGAAT---AT---GATATTAATGATTATT 741
Query 614 TGGTGGGTTATGACCAAATTTGGGTGAATGAATTTCCCCCATTTCCATCAGACGACACA- 672
|||||| | |||| |||||| |||||||||||| | |||| |||| || ||| |
Sbjct 742 TGGTGGATGATGAAGTCTTTTGGGGGAATGAATTTCCTCTATTTTCATCGGAAGAC-CTG 800
Query 673 ATGTT-TTTGGACAACATCGCTGCTTTTGATTAG 705
||||| ||| || ||| | | |||||||||||||
Sbjct 801 ATGTTGTTTTGAAAACGTTGATGCTTTTGATTAG 834
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 34159219960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5