BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg338902
Length=1059
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66720.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1563 0.0
AT1G66690.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 905 0.0
AT1G66700.1 | Symbols: PXMT1 | S-adenosyl-L-methionine-dependen... 841 0.0
AT1G66710.1 | Symbols: | pseudogene, similar to AtPP protein, ... 433 2e-120
> AT1G66720.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr1:24881180-24882480
FORWARD LENGTH=1115
Length=1115
Score = 1563 bits (846), Expect = 0.0
Identities = 991/1062 (93%), Gaps = 6/1062 (1%)
Strand=Plus/Plus
Query 1 ATGTCTCCTACTCCAGAATGGGTCATGGTTGGAGGAGAAGGTCCTGAGAGTTACAAGCAG 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 ATGTCACCTACTCCAGAATGGGTCATGGTTGGAGGAGAAGGTCCTGAGAGTTACAAGCAG 116
Query 61 CATTCTTCGTATCAGAGAGATTTGTTGAAAGCAGCAAAGGATGAAATAAACGCGGTGATC 120
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 117 CATTCTTCGTATCAGAGAGATTTGCTGAAAGCAGCAAAGGATAAAATAAACGCGGTGATT 176
Query 121 GCAGCGAACCTCAGCCTCGATTTGATTTCGAGTCGGTTCAGTGTTGCGGATTTCGGTTGT 180
|| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 177 TCAACGAACCTCAGCCTCAATTTGATTTCGAATCGGTTCAGTGTTGCGGATTTCGGTTGT 236
Query 181 GCGAGTGGACCTAACACTTTTATGGCAGTCCAAAACATAATAGATGCCGTGGAAGAGAAG 240
|| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 237 GCAAGTGGACCTAACACTTTTGTCGCAGTCCAAAACATAATAGATGCCGTGGAAGAGAAG 296
Query 241 TATCTTAGAGAAACCGGACAAAACCCGG-CGGATAACATCGAGTTCCAAGTCCTCTTCAA 299
|||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||
Sbjct 297 TATCTTAGAGAAACCGGACAAAACCCGGACG-ATAACATCGAGTTCCAGGTCCTCTTCAA 355
Query 300 CGACTTAAGCAATAACGATTTCAACACTCTCTTCCAGGGACTTCCTTC-GAGCAGGAGAT 358
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 356 CGACTTAAGCAATAACGATTTCAACACTCTCTTCCAGGGACTTCCTTCTG-GCAGGAGAT 414
Query 359 ACTATAGTGCTGGCGTCCCCGGTTCCTTCTTCGACCGTGTTCTTCCTAAGCAGAGTATCC 418
|||||||||||| | | || ||||||||||| |||||||||||||||||||| |||||||
Sbjct 415 ACTATAGTGCTGCCATTCCTGGTTCCTTCTTTGACCGTGTTCTTCCTAAGCATAGTATCC 474
Query 419 ACATAGGAGTTATGAATTACGCTTTTCAGTTCACCTCCAAAATCCCCAAAGGGATCTCCG 478
|||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct 475 ACATAGGAGTCATGAATTATGCTTTTCAATTCACCTCCAAAATCCCCAAAGGGATCTCAG 534
Query 479 ACCGCAACTCTCCCATGTGGAACAGAGACATACATTGCACTGGCTTCAACAACAAGGTCA 538
|||||||||||||| | |||||||||||||| |||||||| || || |||||||||||||
Sbjct 535 ACCGCAACTCTCCCCTCTGGAACAGAGACATGCATTGCACCGGATTTAACAACAAGGTCA 594
Query 539 AGAAAGCGTATTTTGATCAGGACTCGCTCGACTCCAAGAATATATTGGATGCTCGAGCTG 598
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 595 AGAAAGCGTATCTTGATCAGTTCTCGCTCGACTCCAAGAATATATTGGATGCTCGAGCTG 654
Query 599 AAGAGCTCT-TACCCGGGGGACTGTTATTGCTTTTAGGATCGTGTCTAAGAGAAGGTATC 657
||||||| | | |||| |||| | | |||||||||||||||||||||||||| ||||||
Sbjct 655 AAGAGCT-TGTGCCCGAGGGATTAATGTTGCTTTTAGGATCGTGTCTAAGAGACGGTATC 713
Query 658 AAGATGTCGGAAACCTATAGAGGAATAGTGCTGGATTTAATCGGAGCTTCTTTAAATGAT 717
|||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||
Sbjct 714 AAGATGTCGGAAACATATAGAGGAATAGTGTTGGACTTAATCGGAGCCTCTTTAAATGAT 773
Query 718 CTTGCTCAGAAGGGTGTCATCGAGCAAGACAAGGTGGACTCTTTCAATATCACACTCTAC 777
||||||||| |||||||||| ||| ||||||||||||| |||||||| ||||||||||||
Sbjct 774 CTTGCTCAGCAGGGTGTCATTGAGAAAGACAAGGTGGAGTCTTTCAACATCACACTCTAC 833
Query 778 ACTGCCGAGGAAGACGAGTTGAGGCAAATCATTGAAGAGAACGGGAAGTTCACAATTGAA 837
| ||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 834 ATTGCAGAAGAAGGCGAGTTGAGGCAAATCATAGAAGAGAACGGGAAGTTCACAATTGAG 893
Query 838 GCTTTCGAGGATATCATTCAGTCAAACGGGGAGTCGCTTGACCCCAAGATCTTGGCTGTC 897
|| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 894 GCATTCGAGGATATCATTCAGCCAAACGGGGAGTCGCTTGACCCCAAAATCTTGGCTGTC 953
Query 898 TCCTTGAAGTCTGCCTTTGGAGGTATCATATCCTCACATTTTGGAGCCGAAGCCATGAGG 957
||||||||||||||||||||||||||| | ||| ||||||||||||||||||| |||| |
Sbjct 954 TCCTTGAAGTCTGCCTTTGGAGGTATCCTCTCCGCACATTTTGGAGCCGAAGCGATGATG 1013
Query 958 AAAGCCTTTGAGCTCGTCGAGGCCAAGGCACACCAAGAATTTTCTCGCCTCAAGAATGCC 1017
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1014 AAAGCCTTTGAGCTCGTCGAGGCCAAGGCACACCAAGAATTTTCTCGTCTCCAGAATGCC 1073
Query 1018 AAACCCGCAATGCAATACCTTATCGTACTTCGCAAGAACTGA 1059
|||||| ||||||||||||| |||||||||||||||||||||
Sbjct 1074 AAACCCACAATGCAATACCTCATCGTACTTCGCAAGAACTGA 1115
> AT1G66690.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr1:24869554-24870850
REVERSE LENGTH=1114
Length=1114
Score = 905 bits (490), Expect = 0.0
Identities = 885/1075 (82%), Gaps = 29/1075 (3%)
Strand=Plus/Plus
Query 1 ATGTCTCCTACTCCAGAATGGGTCATGGTTGGAGGAGAAGGTCCTGAGAGTTACAAGCAG 60
||| || |||||| ||| ||| ||||| |||| ||| | || ||||| |||||||| ||
Sbjct 53 ATGACTACTACTCAAGATTGGATCATGATTGGTGGATATGGCCCTGAAAGTTACAACCAA 112
Query 61 CATTCTTCGTATCAGAGAGATTTGTTGAAAGCAGCAAAGGATGAA-ATAAACGCGGTGAT 119
|| || ||||||||||||| ||||||| |||| |||||||| || || | || || |||
Sbjct 113 CAGTCATCGTATCAGAGAGCTTTGTTGGAAGCGGCAAAGGA-CAAGATGACCGAGGCGAT 171
Query 120 CGCAGCGAACCTCAG-CCTCGATTTGATTTCGAGTCGGTTCAGTGTTGCGGATTTCGGTT 178
| | || |||||| | ||| || |||||||||| ||| |||| ||| |||||||||||||
Sbjct 172 CTCCGCCAACCTC-GACCTAGACTTGATTTCGAATCGCTTCATTGTAGCGGATTTCGGTT 230
Query 179 GTGCGAGTGGACCTAACACTTTTATGGCAGTCCAAAACATAATAGATGCCGTGGAAGAGA 238
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 231 GTGCAAGTGGACCTAACACTTTTGTGGCAGTCCAAAACATAATAGATGCCGTGGAAGAGA 290
Query 239 AGTATCTTAGAGAAACCGGACAAAACCCGGCGGATAACATCGAGTTCCAAGTCCTCTTCA 298
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 291 AGTATCTTAGAGAAACCGGACAAAACCCGGAGGATAACATCGAGTTCCAAGTCCTCTTCA 350
Query 299 ACGACTTAAGCAAT-AACGATTTCAACACTCTCTTCCAGGGACTTCCTTCGAGCAGGAGA 357
|||||||||| ||| || || |||||||||||||||||| ||| ||| || | || |||
Sbjct 351 ACGACTTAAG-AATCAATGACTTCAACACTCTCTTCCAGACACTCCCTCCGGGGAGAAGA 409
Query 358 TACTATAGTGCTGGCGTCCCCGGTTCCTTCTTCGACCGTGTTCTTCCTAAGCAGAGTATC 417
|||| ||| || || || || |||||||||||| ||||||||||||||||||||||| ||
Sbjct 410 TACTTTAGCGCCGGGGTTCCTGGTTCCTTCTTCAACCGTGTTCTTCCTAAGCAGAGTTTC 469
Query 418 CACATAGGAGTTATGAATTACGCTTTTCAGTTCACCTCCAAAATCCCCAAAGGGATC-TC 476
||||| | ||| |||| |||||| || | ||||||||||||||||||||||||||| |
Sbjct 470 CACATCGCAGTCATGAGTTACGCATTCCTTTTCACCTCCAAAATCCCCAAAGGGATCATG 529
Query 477 CGACCGCAACTCTCCCATGTGGAACAGAGACATACATTGCACTGGCTTCAACAACAAGGT 536
|||||| ||||||| ||||||||| |||||| || ||||| || |||||| | ||
Sbjct 530 -GACCGCGACTCTCCGTTGTGGAACAAAGACATGCAGTGCACCGGGTTCAACCCCGCTGT 588
Query 537 CAAGAAAGCGTATTTTGATCAGGACTCGCTCGACTCCAAGAATATATTGGATGCTCGAGC 596
|||||||| ||| |||| ||| |||| | ||| |||| || | ||||||||| ||||
Sbjct 589 GAAGAAAGCCTATCTTGAGCAGTACTCTATTGACACCAAAAACCTTTTGGATGCTAGAGC 648
Query 597 TGAAGAGCTCTTACCCGGGGGACTGTTATTGCTTTTAGGATCGTGTCTAAGAGAAGGTA- 655
||| |||||| | ||||||||| || | |||||||||||||||||| | ||||| || |
Sbjct 649 TGAGGAGCTCATGCCCGGGGGATTGATGTTGCTTTTAGGATCGTGTATGAGAGACGG-AG 707
Query 656 TCAAGATGTCGGAAACC-TATAGAGGAATAGTGCTGGATTTAATCGGAGCTTCT-TTAAA 713
| |||||||| || ||| | || ||||| ||| ||||||| || |||| ||| ||||
Sbjct 708 TTAAGATGTCCGAGACCCT-TAAAGGAACAGTAATGGATTTTATTGGAGAATCTCTTAA- 765
Query 714 TGATCTTGCTCAGAAGGGTGTCATCGAGCAAGACAAGGTGGACTCTTTCAATATCACACT 773
||| |||||||| |||||||||| ||| || || ||||||||| ||||||| | | || |
Sbjct 766 TGACCTTGCTCAAAAGGGTGTCACCGAACAGGAAAAGGTGGACACTTTCAAAACCTCAAT 825
Query 774 CTACACTGCCGAGGAAGACGAGTTGAGGCAAATCATTGAAGAGAACGGGAAGTTCACAAT 833
|||| ||| || ||| |||| | |||||||||||||| ||||| ||||||||||||||
Sbjct 826 CTACTTTGCAGAACAAGGCGAGATAAGGCAAATCATTGAGGAGAATGGGAAGTTCACAAT 885
Query 834 TGAAGCTTTCGAGGATATCATTCAGTCAAACGGG-GAGT--C-GCTTGACCCCAAGATC- 888
|| |||||||||||||||||||| || || | |||| | ||| |||||||||| |
Sbjct 886 CGAGGCTTTCGAGGATATCATTCACTCTAA-GAATGAGTTTCCGCTAGACCCCAAGA-CA 943
Query 889 TTGGCTGTCTCCTTGAAGTCTGCCTT-T--GGAGGTATCATATCCTCACATTTTGGAGCC 945
||||| ||||||| ||| ||||| | || | | | |||||| ||||||||||| |
Sbjct 944 TTGGCCATCTCCTTCAAG---GCCTTATATGGTGCTTTTATATCCGCACATTTTGGAATC 1000
Query 946 GAAGCCATGAGGAAAGCCTTTGAGCTCGTCGAGGCCAAGGCACACCAAGA-ATTTTCTCG 1004
|||| ||||||||||||||||||||| || |||| |||||||| | || | |||| ||||
Sbjct 1001 GAAGTCATGAGGAAAGCCTTTGAGCTTGTTGAGGTCAAGGCACGCGAACAGATTT-CTCG 1059
Query 1005 CCTCAAGAATGCCAAACCCGCAATGCAATACCTTATCGTACTTCGCAAGAACTGA 1059
|||| | || | |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 1060 CCTCCATAAGGTCAAACCCGGGATGCAATACCTCATCGTGCTTCGCAAGAACTGA 1114
> AT1G66700.1 | Symbols: PXMT1 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein | chr1:24873291-24874758
REVERSE LENGTH=1299
Length=1299
Score = 841 bits (455), Expect = 0.0
Identities = 879/1080 (81%), Gaps = 43/1080 (4%)
Strand=Plus/Plus
Query 1 ATGTCTCCTACTCCAGAATGGGTCATGGTTGGAGGAGAAGGTCCTGAGAGTTACAAGCAG 60
||| || |||||||||| ||| ||||| |||||||||| |||||||||||||| || ||
Sbjct 69 ATGACTACTACTCCAGATTGGATCATGATTGGAGGAGACGGTCCTGAGAGTTATAACCAA 128
Query 61 CATTCTTCGTATCAGAGAG-ATTTGTTGAAAGCAG-CAAAGGATGAA-ATAAACGCGGTG 117
|| || ||||||||||||| | |||||| |||| | ||||||| || || | | || |
Sbjct 129 CAATCCTCGTATCAGAGAGCA-TTGTTGGAAGC-GACAAAGGA-CAAGATGACCAAGGCG 185
Query 118 ATCGCAGCGAACCTCAG-CCTCGATTTGATTTCGAGTCGGTTCAGTGTTGCGGATTTCGG 176
||| |||| || ||| | ||| || |||||||||| ||| |||| ||| |||||||||||
Sbjct 186 ATCTCAGCCAATCTC-GACCTAGACTTGATTTCGAATCGCTTCATTGTAGCGGATTTCGG 244
Query 177 TTGTGCGAGTGGACCTAACACTTTTATGGCAGTCCAAAACATAATAGATGCCGTGGAAGA 236
|||||| |||||||||||||||||| ||||||| ||||||||||||||||| || |||||
Sbjct 245 TTGTGCAAGTGGACCTAACACTTTTGTGGCAGTTCAAAACATAATAGATGCGGTAGAAGA 304
Query 237 GAAGTATCTTAGAGAAACCGGACAAAACCCGGCGGATAACATCGAGTTCCAAGTCCTCTT 296
||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 305 AAAGTACCGTAGAGAAACCGGACAAAACCCGGCAGATAACATCGAGTTCCAAGTCCTCTT 364
Query 297 CAACGACTTAAGCAAT-AACGATTTCAACACTCTCTTCCAGGGACTTCCTTC-GAGCAGG 354
||| || || ||| | || ||||||||||||||||||||| |||||| | | | ||
Sbjct 365 CAATGATTTCAGCC-TCAATGATTTCAACACTCTCTTCCAGACACTTCCACCCG-GAAGA 422
Query 355 AGATACTAT-AGTGCTGGCGTCCCCGGTTCCTTCTTCGACCGTGTTCTTCCTAAGCAGAG 413
||||||| | || ||||| || || |||||||||||||| ||||||||||||||| ||||
Sbjct 423 AGATACT-TCAGCGCTGGAGTTCCTGGTTCCTTCTTCGAACGTGTTCTTCCTAAGGAGAG 481
Query 414 TATCCACATAGGAGTTATGAATTACGCTTTTCAGTTCACCTCCAAAATCCCCAAAGGGAT 473
| ||||||| ||||| |||| |||||| || || ||||||||||||||||||||||||||
Sbjct 482 TTTCCACATCGGAGTCATGAGTTACGCGTTCCATTTCACCTCCAAAATCCCCAAAGGGAT 541
Query 474 CTCCG-ACCGCAACTCTCCCATGTGGAACAGAGACATACATTGCACTGGCTTCAACAACA 532
| | ||||| |||||||| ||||||||| |||||| || ||||| || |||||| |
Sbjct 542 -TATGGACCGCGACTCTCCCTTGTGGAACAAAGACATGCAGTGCACGGGGTTCAACCCCG 600
Query 533 AGGTCAAGAAAGCGTATTTTGATCAGGACTCGCTCGACTCCAAGAATA-TATTGGATGCT 591
||||||||||||||| |||| ||| |||| ||||| |||| ||| | || ||||||
Sbjct 601 CTGTCAAGAAAGCGTATCTTGACCAGTACTCTATCGACACCAA-AATTCTTTTAGATGCT 659
Query 592 CGAGCTGAAGAGCTCTTACCCGGGGGACTGTTATTGCTTTTAGGATCGTGTCTAAGAGAA 651
|||||||||||||| | |||||||| || | ||||||||||||||||||||||||||
Sbjct 660 AGAGCTGAAGAGCTCGTGCCCGGGGGGTTGATGTTGCTTTTAGGATCGTGTCTAAGAGAC 719
Query 652 GGTA-TCAAGATGTCGGAAACCTATAGAGGAA-TAGTGCTGGATTTAATCGGAGCTTCT- 708
|| | | |||||||| || ||| || ||||| | || ||||||| || |||| |||
Sbjct 720 GG-AGTTAAGATGTCCGAGACCCCTAAAGGAACT-GTAATGGATTTTATTGGAGAATCTC 777
Query 709 TTAAATGATCTTGCTCAGA-AGGGTGTCATCGAGCAAGACAAGGTGGACTCTTTCA-ATA 766
||| ||||||||| | | ||||||||| ||||||||| ||||||||| |||||| | |
Sbjct 778 TTAGC-GATCTTGCTAA-ACAGGGTGTCACCGAGCAAGAGAAGGTGGACACTTTCAGA-A 834
Query 767 TCACACTCTACACTGCCGAGGAAGACGAGTTGAGGCAAATCATTGAAGAGAACGGGAAGT 826
| || | ||| ||| || ||| ||| | |||||||||||||| ||||| |||||||
Sbjct 835 CCTCAATTTACTTTGCAGAACAAGGTGAGATAAGGCAAATCATTGAGGAGAATGGGAAGT 894
Query 827 TCACAATTGAAGCTTTCGAGGATATCATTCA-G-TCAAA-CGGGGAGTCGCTT--GACCC 881
||||||| || ||||| || ||||||||||| | | ||| || | || ||| |||||
Sbjct 895 TCACAATCGAGGCTTTTGAAGATATCATTCACGCTAAAAACGAGTT-TC-CTTTTGACCC 952
Query 882 CAAGATC-TTGGCTGTCTCCTTGAAGTC-TGCCTTTGGAGGTATCATATCCTCACATTTT 939
||||| | ||||| |||| || ||| | | | | ||| | | |||| ||| ||||||||
Sbjct 953 CAAGA-CATTGGCCATCTCTTTCAAGGCCTTC-TATGGTGCTTTCATTTCCGCACATTTT 1010
Query 940 GGAGCCGAAGCCATGAGGAAAGCCTTTGAGCTCGTCGAGGCCAAGGCACACCAAGA-ATT 998
|||| ||||| ||||||||||||||||||||| || |||| |||||||| | || | |||
Sbjct 1011 GGAGTCGAAGTCATGAGGAAAGCCTTTGAGCTTGTTGAGGTCAAGGCACGCGAACAGATT 1070
Query 999 TTCTCGCCTCAAGAA-TGCCAAACCCGCAATGCAATACCTTATCGTACTTCGCAAGAACT 1057
| |||||||| | || | ||||||||| |||||| ||||| ||||| |||||||||||||
Sbjct 1071 T-CTCGCCTCCATAACT-CCAAACCCGGAATGCAGTACCTCATCGTGCTTCGCAAGAACT 1128
> AT1G66710.1 | Symbols: | pseudogene, similar to AtPP protein,
blastp match of 55% identity and 1.0e-92 P-value to GP|7657877|emb|CAB89183.1||AJ245479
AtPP protein {Brassica napus var.
napus} | chr1:24878865-24880220 REVERSE LENGTH=1356
Length=1356
Score = 433 bits (234), Expect = 2e-120
Identities = 504/630 (80%), Gaps = 36/630 (6%)
Strand=Plus/Plus
Query 122 CAGCGAACCTCAGCCTCGATTTGATTTCGAGTCGGTTCAGTGTTGCGGATTTCG-GTTGT 180
|||||||||||||||||||||| |||||| |||||| || | || || |||| || |
Sbjct 323 CAGCGAACCTCAGCCTCGATTTCCTTTCGAACCGGTTCGGTATAGCAGACTTCGATTTTT 382
Query 181 GCGAGTGGACCTAACACTTTTATGGCAGTCCAAAACATAATAGATGCCGTGGAAGAGAAG 240
||||||||||||||||||||| || |||||||||||||| | || || ||||| ||
Sbjct 383 GCGAGTGGACCTAACACTTTTGTGTCAGTCCAAAACATACT---TG--GTAGAAGAAAAA 437
Query 241 TATCTTAGAGAAACCGGACAAAA-CCCGGCGGA--TA-ACATCGAGTTCCAAGTCCTCTT 296
|| | |||||| | ||||||||| |||| | | || ||||||| ||||| || |||||
Sbjct 438 TACCATAGAGAGA-CGGACAAAACCCCGACATACGTACACATCGATTTCCATGTTCTCTT 496
Query 297 CAACGACTTAAGCAAT-AACGATTTCAACACTCTCTTCCAGGGACTTCCT-TCGAGCAGG 354
||||||||| ||| || || ||||||||||||||||| || |||| || | ||| ||
Sbjct 497 CAACGACTTTAGC-ATCAATGATTTCAACACTCTCTTTCAAACACTTTCTCTAGAG-AGA 554
Query 355 AGATACTATAGTGCTGGCGTCCCCGGTTCCTTCTTCGACCGTGTTCTTCCTAAGCAGAGT 414
||||||||||| ||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct 555 AGATACTATAGCGCTGGAGTTCCTGGTTCCTTCTTCGACCGTGTTCTTCCTAAGGAAAGT 614
Query 415 ATCCA-CATAGGAGTTATGAATTACGCTTTTCAGTTCACCTCCAAAATCCCCAAAGGGAT 473
|| | ||||||||| |||| |||| | || || |||||||| ||||| ||||||| |||
Sbjct 615 TTCTAACATAGGAGTCATGAGTTACACATTCCACTTCACCTCGAAAATACCCAAAGCGAT 674
Query 474 C-TCCGACCGCAACTCTCCCATGTGGAACAGAGACATACATTGCACTGGC-TTCAACAAC 531
| | |||||| |||||||| ||||||||| |||||| || |||| | || |||||| |
Sbjct 675 CATG-GACCGCGACTCTCCCTTGTGGAACAAAGACATGCAGTGCA-TCGCGTTCAAC--C 730
Query 532 AAG-G-TCAAGAAAGCGTATTTTGATCAGGACTCGCTCGACTCCAAGAATATATTGGATG 589
||| | | ||||| |||| | ||||||| |||| ||||| |||||||| ||| |||||
Sbjct 731 AAGCGGTAAAGAATGCGTGTCTTGATCAATACTCTATCGACACCAAGAATCTAT-GGATG 789
Query 590 CTCGAGCTGAAGAGCTCTTACCCGGGGGACTGTTATTGCTTTTAGGATCGTGTCT-A-AG 647
|| |||||||||||||| | ||||| ||| || | ||||||||||||| |||||| | ||
Sbjct 790 CTAGAGCTGAAGAGCTCGTGCCCGGAGGATTGATGTTGCTTTTAGGATTGTGTCTTAGAG 849
Query 648 A-GAAGGTA-TCAAGATGTCGGAAACCTATAGAGGAATAGTGCTGGA-TTTAATCGGAG- 703
| |||| || | |||||||| || ||| || |||||| || |||| |||| ||||||
Sbjct 850 ACGAAGTTAATTAAGATGTCCGAGACCCCTAAAGGAATCGTAATGGACTTTA-TCGGAGA 908
Query 704 -CTTCTTTAAATGATCTTGCTCAGAAGGGT 732
| |||| | |||||||||||| || |||
Sbjct 909 ACCTCTT-AG-TGATCTTGCTCA-AACGGT 935
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51857162985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5