BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg339138
Length=3099
Score E
Sequences producing significant alignments: (Bits) Value
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fa... 4859 0.0
AT1G68935.1 | Symbols: | unknown protein; Has 0 Blast hits to ... 715 0.0
> AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat
family protein | chr1:25921453-25925845 REVERSE LENGTH=3525
Length=3525
Score = 4859 bits (2631), Expect = 0.0
Identities = 2876/2996 (96%), Gaps = 9/2996 (0%)
Strand=Plus/Plus
Query 1 ATGGAGATACAGACAGCAGAGAGCAACGTCGTATGTTCAATTGATATTTTTGAATCACTA 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 340 ATGGAGATACAGACAGCAGAGAGCAACGTCATATGTTCAATTGATATTTTTGAATCACTA 399
Query 61 TCCGATAGTGTAGATGTGGCCAAGAATCTGGTTGAGAAATCTCAAGAAAGTAACGGAGCT 120
||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||
Sbjct 400 TCCGATAGTGTAGATGTTGCCAAGAAACTGGTTGAGAAATCTCAAGAAAGCAACGAAGCC 459
Query 121 GAATCAACTACTGATCTGAGAAGCATTGAGGCAGGTTTTGAAGGTGTTGTGAAGCAGATG 180
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 460 GAATCAACTACTGATCTGAGAAGCATTGAGGCAGGTTTTGAAGGCGTTGTAAAGCAGATG 519
Query 181 GGTGAAACTTTGCAGTCCATACCCGAATCAACATTCGACGAGGAAGAATATATAGGAGTG 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 520 GGTGAAACTTTGCAGTCCATACCTGAATCAACATTCGACGAGGAAGAATATATAGGAGTT 579
Query 241 GTTATTCAGTCTCTTTCAAATGAGATGCAGAATGCTAACATTGGAGATGGTAGTAAAAGT 300
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 580 GTTATTCAGTCTCTTTCAAATGAGATGCAAAATGCTACCATTGGAGATGGTAGTAAAAGT 639
Query 301 GAGATGATACAGAATGGGCAGCAGAAGATTTCTGCAAAGCATTCACCGGAAATTGTGTCA 360
||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 640 GAGATGATAAACAATGGGCAGCAGAAGATTTCTGCAAAGCATACACCGGATATTGTGTCT 699
Query 361 GAGCAAATGGAGGAAGATCTCTATCCCACTGATCCTGAATTTTCCTATGAAAGTTACATG 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 GAGCAAATGGAGGAAGACCTCTATCCCACTGATCCTGAATTTTCCTATGAAAGTTACATG 759
Query 421 ATGTATAGTGAATCACAAT--C-AATGACCGAAATACCAGATATCCCAAGCCAGAGCACA 477
||||||||||||||||||| | |||||| || |||||||||||||||||| ||||||||
Sbjct 760 ATGTATAGTGAATCACAATCACAAATGACTGATATACCAGATATCCCAAGCAAGAGCACA 819
Query 478 GATGTTAGCCGCCAGAGAAAGCATGGAAATCATAGTGAATCACAATCACAAGTAACCGAA 537
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 820 GATGTTAGCCGCCAGAGAAAGCATGGAAATCATAGTGAATCACAATCACTAGTAACCGAA 879
Query 538 ATACCAGATATCCCAAGCCAGAGCACATATGTTAGCAGCCAGAGAGAGCAT-GGAGATCT 596
||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||
Sbjct 880 ATACCAGATATCCCAAGCCAGAGCACAAATGTTAGCAGCCAGAGAAAGCATGGGA-ATCT 938
Query 597 CAGTAAATCACAATCACAAATTACCGAAATACCAGATATCCCAAGCCAGAGCTCGAATGC 656
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 939 CAGTAAATCACAATCACAAAGTACCGAAATACCAGATATCCCAAGCCAGAGCTCGAATGC 998
Query 657 TAGCAGCCAGAGAAAGTATGGAATTCTTAGCGAATCCTTGTCAATGTTACCACAGGTGAC 716
||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||
Sbjct 999 TAGCAGCCAGAGAAAGTATGGAAATCTTAGTGAATCATTGTCAATGTTACCACAGGTGAC 1058
Query 717 ACAGTTCATGGAGCCTCCATACCAAGCTTTCATCTGCCCATTGACCAAAGAGATAATGGA 776
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1059 ACAGTTCATGGAACCTCCATACCAAGCTTTCATCTGCCCGTTGACCAAAGAGATAATGGA 1118
Query 777 TGATCCTGTCACCACAGAAACAGGAGTAACCTGCGAAAGACAAGCAGTAATAGAGTGGTT 836
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 AGATCCAGTCACCACAGAAACAGGAGTAACCTGCGAAAGACAAGCAGTAATAGAGTGGTT 1178
Query 837 TGACAGTTTTGGAAACTCCGATGAGATCAACTGTCCAGTTACCGGG-CAAAAGTTGACCA 895
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1179 TGACAGTTTTGGAAACTCCGATGAGATCAACTGTCCAGTTA-CGGGTCAAAAGTTGACCA 1237
Query 896 CTGAATTAAGTGAAAATGTTGTCTTGAAAACCATCATTCAGGAATGGAAAGTACGTAACG 955
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 CTGAATTAAGTGCAAATGTTGTCTTGAAAACCATCATTCAGGAATGGAAAGTACGTAACG 1297
Query 956 AGGCAGCAAGAATCAAAGTGGCTCATGCAGCTTTATCCTTAGGCGGTTCAGAAAGTATGG 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 AGGCAGCAAGAATCAAAGTGGCTCATGCAGCTTTATCCTTAGGCGGTTCAGAAAGTATGG 1357
Query 1016 TTATCGACGCATTCAGAGATCTGCAAATGACCTGTGAAGGGAAACAGTACAACAAGGTAC 1075
| |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1358 TCATCGACGCGTTAAGAGATCTGCAAATGACCTGTGAAGGGAAAGAGTACAACAAGGTAC 1417
Query 1076 GGGTCCGTGAAGCTGGGATCATTCAGCTGCTTGATAGATACCTGACATACAGAAGTAAAG 1135
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1418 AAGTCCGTGAAGCTGGGATCATTCAGCTGCTTGATAGATACCTGACGTACAGAAGTAAAG 1477
Query 1136 ATGTGAGGTATGAGCTGCTACGGTTGTTAAGGACACTGGCGGATGAAGACACTGATGACG 1195
||||||||| ||| || ||| ||| |||||||||||||| |||||||| ||||||||||
Sbjct 1478 ATGTGAGGTTTGAACTACTAAAGTTCTTAAGGACACTGGCAGATGAAGAAACTGATGACG 1537
Query 1196 GAAAGGAAATGATTACAAAGACAATAACTATGTCATGCATAATCAAACTTTTGGGAAGCA 1255
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1538 GAAAGGAAATGATTGTGAAGACAATAACTATGTCATGCGTAATCAAACTTTTGGGAAGCA 1597
Query 1256 GTCACCAGCCTGTAAGACATGCAGCACAAGCCTTACTGCTTGAGCTTTCGAAATCCCAAC 1315
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1598 GTCACCAGCCTGTAAGACATGCAGCACAAGCCTTACTGCTTGAGCTTTCAAAATCCCAAC 1657
Query 1316 ATGCGTGTGAGAAGATTGGGACTGCTACAGGGGCGATATTGATGTTAGTTACCGCAAAGT 1375
|||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||
Sbjct 1658 ATGCATGTGAGAAGATTGGGACTGCTAGAGGGGCGATACTAATGTTAGTTACCGCAAAGT 1717
Query 1376 ATAACAGAGAGTTGGATGCCTTTGCATCTGAAACATCAGACCAAATCTTAAGAAATCTAG 1435
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1718 ATAACAGGGAGTTGGATTCCTTTGCATCTGAAACATCAGACCAAATCTTAAGAAATTTAG 1777
Query 1436 AGAAGTGTCCTGAGAATATCAAGCAAATGGCAGAGAGTGGGCTATTGGAACCTCTTCTGG 1495
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1778 AGAAGTGTCCTGAGAACATCAAGCAAATGGCAGAGAGTGGACTATTGGAACCTCTTCTGG 1837
Query 1496 GGCATCTAGCAGAAGGGAGTGAAGAGACTCAGGTGGCAATGGCTGCGTACCTTGTGGAAA 1555
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1838 GCCATCTAGCAGAAGGGAGTGAGGAGACTCAGGTGGCAATGGCTGCGTACCTTGTGGAAA 1897
Query 1556 TTGATATTGGACATGAGaaaaaaaCTTACGTAGCTGAGAAGGCTTGCCCTGCGCTCATTG 1615
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1898 TTGATATTGGACATGAGAAAAAAACTTATGTAGCTGAGAAGGCTTGCCCTGCGCTCATTG 1957
Query 1616 GGCTGGTGCAAAGTGAAAATACTGACGCTAGAAGAGCCGCCTTCAAAGCTCTAGCTCATA 1675
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 1958 GGCTGGTGCAAAGTGAAAATATTGACGCTAGAAGAGCCGCCTTCAAAGCTCTTGCTCATA 2017
Query 1676 TTTCATTGTATCACCCCAACAACCAGATATTGGTAGAAGTTGGCATCATCAAGATCATGG 1735
||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||
Sbjct 2018 TTTCATTGTATCACCCCAACAACAAGATACTGGTAGAGGTCGGCATCATCAAGATCATGG 2077
Query 1736 TCGAAGAGATGTTCACCAAGCGAGTTTTTAGTGATCTGATGAACTCCAGGAACGAAGCTG 1795
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2078 TCGAAGAAATGTTCACGAAGCGAGTGTTTAGTGATCTGATGAACTCCAGGAACGAAGCTG 2137
Query 1796 CTACAATACTTGCAAATATACTGGAATCTGGGCTGGAACATGAGACCTTTGAGGTGAATA 1855
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 CTACAATACTTGCAAACATACTGGAATCTGGGCTGGAACATGAGACCTTTGAGGTGAATA 2197
Query 1856 CTCATGGCCACACATTAGGCTCGGATTACTTTGTATACAACATCATCCAAATGCTCAAGA 1915
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2198 CTCATGGCCACACATTAGGCTCGGATTACTTTGTATACAACATCATCCACATGCTCAAGA 2257
Query 1916 ACTCAAGCCCAGACGATCTTAACATTAATTTGATCAGGATACTCCTATCCTTGTCCAAAT 1975
||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 2258 ACTCAAGCCCAGATGATCTTAACATTGATTTGATCAGGATTCTCCTATCCTTGTCCAAAT 2317
Query 1976 CACCCAGGGCGATGGCAACAATTGTCTCAGTGATCAAAGAAACCGACGCAAGCTTCGCCA 2035
|||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2318 CACCTAGAGCGATGGCAACAATCGTCTCAGTGATCAAAGAAACCGACGCAAGCTTTGCCA 2377
Query 2036 TGATAGAACTCATCAACAATCCTCATGAAGAATTGGGGGTTGGAGCATTAAAACTTCTGA 2095
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 2378 TGATAGAACTCATCAACAATCCTCATGACGAATTAGGGGTTGGAGCATTAAAACTTCTAA 2437
Query 2096 TAGCACTTACCCCCTACATCGGTCACACGCTATCAGAGAGACTATGTAAAACTAGAGGCC 2155
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2438 TAGCCCTTACCCCCTACATCGGTCACACGCTATCAGAGAGACTATGTAAAACTAGAGGTC 2497
Query 2156 AGCCAGAGAATCTTATCCAGTGCCCAGTAGAAGCAAATCAAATAACAGAAAAGCATGCTG 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2498 AGCCAGAGAATCTTATCCAGTGCCCAGTAGAAGCAAATCAAATAACAGAAAAGCATGCTG 2557
Query 2216 TTTCAGCTAAGTTACTTGCTAAACTGCCTCATCAAAATCTGACTCTTAATTTAGCACTGG 2275
||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 2558 TTTCAGCCAAGTTACTTGCTAAACTTCCTCATCAGAATCTGACTCTTAATTTAGCACTGG 2617
Query 2276 TCAACGAGAGCATAGTGTCTGAAATTCTGCATGCAATCCATCTGATTCAAAGAAGTGGAA 2335
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2618 TCAACGAGAGCATAGTGTCTGAAATTCTGCATGCAATCCATCTGATTCAAAGAAGTGGAG 2677
Query 2336 CACGAACAAGCAGGTATGCTACTGATTTTCT-GGAAGGTCTCGTTGGCATCTTAGTGAGA 2394
||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct 2678 CACGAACAAGCAGGTATGCAACTGATTT-CTTGGAAGGTCTCGTTGGCATCTTAGTGAGA 2736
Query 2395 TTCACAACTACATTGTACGAGCCCCAAATGATGTACCTAGCCAGAAACCATGATTTGACA 2454
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2737 TTCACAACTACACTGTACGAGCCCCAAATGATGTACCTAGCCAGAAACCACGATTTGACA 2796
Query 2455 TCAGTGTTTGTTGATTTATTGATGAAAACATCAAGCGACGAAGTTCAAAGGTTATCAGCG 2514
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2797 TCAGTGTTTGTTGATTTATTGATGAAAACATCAAGCGACGAAGTTCAAAGGTTATCAGCA 2856
Query 2515 ACTGGACTAGAAAATCTATCATCTACAACTATGACTTTATCGAGGCCACCTCAACCTAGG 2574
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2857 ACTGGACTAGAAAATCTATCATCTACAACTATGACTTTATCGAGGCCACCCCAACCTAGG 2916
Query 2575 AGCACGAAATTCATGGGATCCCTGAGTATGCCTAGGTCTTTTTCCCTCCGTTCATCCAAA 2634
||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 2917 AGCACAAAATTCATGGGATCACTGAGTATGCCTAGGTCTTTCTCCCTCCGTTCATCCAAA 2976
Query 2635 AAGAAGCAAATAGAAATCTGTGCAATCCACAGAGGGGTATGTTCTGCAAAAAACACATTT 2694
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2977 AAGAAGCAGATAGAGATCTGTGCAATCCACAGAGGCGTATGTTCTGCAAAAAACACATTT 3036
Query 2695 TGCTTGGTTGAAGCAAATGCAATCACGAAGCTACTAGCATGTTTGCAGAGTGATAAAGTA 2754
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 3037 TGCTTGGTTGAAGCAAATGCAATCACAAAGCTTCTAGCATGTTTGCAGAGTGATAAAGTG 3096
Query 2755 GAGGTAGTGGAGTCAGCATTAGCTGCTATATGCACGCTATTAGATGACAAGGTCGATGTG 2814
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3097 GAGGTAGTGGAGTCAGCATTAGCTGCTATATGCACGCTATTAGATGACAAGGTCGAAGTG 3156
Query 2815 GAGAAGAGTTTAAGCATGCTGAGTGAAATGAATGCAGTACAACTAATTCTAAATGCAGTC 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3157 GAGAAGAGTTTAAGCATGCTGAGTGAAATGAATGCAGTACAACTAATTCTAAATGCAGTC 3216
Query 2875 AAAGAACACAAGAAAGAGTCTCTATTGCAGAAAGCATTTTGGATGATTGACAAGTTCATA 2934
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3217 AAGGAACACAAGAAAGAGTCTCTATTGCAGAAAGCATTTTGGATGATTGACAAGTTCATT 3276
Query 2935 ATTAGAGGCGGAGATAAGTATGCCAGTGAAATATCACAAGATAGGATGCTGTCAGG 2990
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 3277 ATTAGAGGCGGAGATAAGTATGCCAGCGAAATATCACAAGATAGGATGTTGTCAGG 3332
Score = 222 bits (120), Expect = 1e-56
Identities = 167/188 (89%), Gaps = 9/188 (5%)
Strand=Plus/Plus
Query 425 ATAGTGAATCACAATCA--A-TGACCGAAATACCAGATATCCCAAGCCAGAGCACAGATG 481
||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||
Sbjct 851 ATAGTGAATCACAATCACTAGTAACCGAAATACCAGATATCCCAAGCCAGAGCACAAATG 910
Query 482 TTAGCCGCCAGAGAAAGCATGGAAATCAT-AGTGAATCACAATCACAA-GTAACCGAAAT 539
||||| |||||||||||||||| |||| | ||| |||||||||||||| ||| |||||||
Sbjct 911 TTAGCAGCCAGAGAAAGCATGGGAATC-TCAGTAAATCACAATCACAAAGTA-CCGAAAT 968
Query 540 ACCAGATATCCCAAGCCAGAGCAC-ATATGTTAGCAGCCAGAGAGAGCATGGAGATCTCA 598
|||||||||||||||||||||| | | ||| ||||||||||||| || ||||| |||| |
Sbjct 969 ACCAGATATCCCAAGCCAGAGCTCGA-ATGCTAGCAGCCAGAGAAAGTATGGAAATCTTA 1027
Query 599 GTAAATCA 606
|| |||||
Sbjct 1028 GTGAATCA 1035
Score = 207 bits (112), Expect = 4e-52
Identities = 154/174 (89%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 509 ATAGTGAATCACAATCACAAGTAACCGAAATACCAGATATCCCAAGCCAGAGCACATATG 568
|||||||||||||||||||| | || || |||||||||||||||||| |||||||| |||
Sbjct 764 ATAGTGAATCACAATCACAAATGACTGATATACCAGATATCCCAAGCAAGAGCACAGATG 823
Query 569 TTAGCAGCCAGAGAGAGCATGGAGATC-TCAGTAAATCACAATCACAAATTACCGAAATA 627
||||| |||||||| |||||||| ||| | ||| |||||||||||| | | |||||||||
Sbjct 824 TTAGCCGCCAGAGAAAGCATGGAAATCAT-AGTGAATCACAATCACTAGTAACCGAAATA 882
Query 628 CCAGATATCCCAAGCCAGAGCTCGAATGCTAGCAGCCAGAGAAAGTATGG-AAT 680
||||||||||||||||||||| | |||| |||||||||||||||| |||| |||
Sbjct 883 CCAGATATCCCAAGCCAGAGCACAAATGTTAGCAGCCAGAGAAAGCATGGGAAT 936
Score = 108 bits (58), Expect = 4e-22
Identities = 85/97 (88%), Gaps = 5/97 (5%)
Strand=Plus/Plus
Query 427 AGTGAATCACAAT--CAATG-ACCGAAATACCAGATATCCCAAGCCAGAGCACAGA-TGT 482
||| ||||||||| ||| | |||||||||||||||||||||||||||||| | || ||
Sbjct 940 AGTAAATCACAATCACAAAGTACCGAAATACCAGATATCCCAAGCCAGAGCTC-GAATGC 998
Query 483 TAGCCGCCAGAGAAAGCATGGAAATCATAGTGAATCA 519
|||| ||||||||||| ||||||||| ||||||||||
Sbjct 999 TAGCAGCCAGAGAAAGTATGGAAATCTTAGTGAATCA 1035
> AT1G68935.1 | Symbols: | unknown protein; Has 0 Blast hits to
0 proteins in 0 species (source: NCBI BLink). | chr1:25921525-25923094
FORWARD LENGTH=814
Length=814
Score = 715 bits (387), Expect = 0.0
Identities = 416/430 (97%), Gaps = 2/430 (0%)
Strand=Plus/Minus
Query 2006 TGATCAAAGAAACCGACGCAAGCTTCGCCATGATAGAACTCATCAACAATCCTCATGAAG 2065
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 814 TGATCAAAGAAACCGACGCAAGCTTTGCCATGATAGAACTCATCAACAATCCTCATGACG 755
Query 2066 AATTGGGGGTTGGAGCATTAAAACTTCTGATAGCACTTACCCCCTACATCGGTCACACGC 2125
|||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 754 AATTAGGGGTTGGAGCATTAAAACTTCTAATAGCCCTTACCCCCTACATCGGTCACACGC 695
Query 2126 TATCAGAGAGACTATGTAAAACTAGAGGCCAGCCAGAGAATCTTATCCAGTGCCCAGTAG 2185
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 694 TATCAGAGAGACTATGTAAAACTAGAGGTCAGCCAGAGAATCTTATCCAGTGCCCAGTAG 635
Query 2186 AAGCAAATCAAATAACAGAAAAGCATGCTGTTTCAGCTAAGTTACTTGCTAAACTGCCTC 2245
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 634 AAGCAAATCAAATAACAGAAAAGCATGCTGTTTCAGCCAAGTTACTTGCTAAACTTCCTC 575
Query 2246 ATCAAAATCTGACTCTTAATTTAGCACTGGTCAACGAGAGCATAGTGTCTGAAATTCTGC 2305
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 ATCAGAATCTGACTCTTAATTTAGCACTGGTCAACGAGAGCATAGTGTCTGAAATTCTGC 515
Query 2306 ATGCAATCCATCTGATTCAAAGAAGTGGAACACGAACAAGCAGGTATGCTACTGATTTTC 2365
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct 514 ATGCAATCCATCTGATTCAAAGAAGTGGAGCACGAACAAGCAGGTATGCAACTGATTT-C 456
Query 2366 T-GGAAGGTCTCGTTGGCATCTTAGTGAGATTCACAACTACATTGTACGAGCCCCAAATG 2424
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 455 TTGGAAGGTCTCGTTGGCATCTTAGTGAGATTCACAACTACACTGTACGAGCCCCAAATG 396
Query 2425 ATGTACCTAG 2434
||||||||||
Sbjct 395 ATGTACCTAG 386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154112848896
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5