BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg339776
Length=2793
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76040.2 | Symbols: CPK29 | calcium-dependent protein kinase... 2423 0.0
AT1G76050.2 | Symbols: | Pseudouridine synthase family protein... 1166 0.0
AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase... 379 7e-104
> AT1G76040.2 | Symbols: CPK29 | calcium-dependent protein kinase
29 | chr1:28537673-28540637 FORWARD LENGTH=1945
Length=1945
Score = 2423 bits (1312), Expect = 0.0
Identities = 1455/1525 (95%), Gaps = 5/1525 (0%)
Strand=Plus/Plus
Query 1 ATGGGTTTTTGCTTCTCCAAATTCT-GCAAATCACAAACCCATGAGATCCCAATCTCTTC 59
||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||
Sbjct 152 ATGGGATTTTGCTTCTCCAAATT-TGGCAAATCACAAACACATGAGATCCCAATCTCTTC 210
Query 60 CTCTTCCGATTCTAGCCCTCCTCATCACTACCAACCTCTCCCTAAACCAACTGTTTCTCA 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 CTCTTCCGATTCAAGCCCTCCTCATCACTACCAACCTCTCCCTAAACCAACTGTTTCTCA 270
Query 120 GGGTCAAACCAGTAATCCCACCTCCAATCCTCAGCCCAAACCCAAACCGGCTCCTCCTCC 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 271 AGGTCAAACCAGTAATCCCACCTCCAATCCTCAGCCCAAACCCAAACCCGCTCCTCCTCC 330
Query 180 TCCT---TCATCATCCTCCGGTTCTCAAATCGGTCCAATCCTAAACCGACCAATGATCAA 236
|||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 331 TCCTCCGTCAACATCCTCCGGTTCACAAATCGGTCCAATCCTAAACCGACCAATGATCGA 390
Query 237 TCTCTCAGCTCTCTACGACCTCCACAAAGAACTAGGCCGTGGCCAATTCGGAATCACTTA 296
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 391 TCTCTCAGCTCTCTACGACCTCCACAAAGAACTCGGCCGTGGCCAATTCGGAATCACTTA 450
Query 297 CAAATGTACGGACAAATCCAACGGCCGAGAATACGCCTGCAAATCCATCTCAAAACGTAA 356
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 451 CAAATGCACGGACAAATCCAACGGTCGAGAATACGCCTGCAAATCCATCTCAAAACGTAA 510
Query 357 ACTCATACGTCGCAAAGACATCGAAGACGTGAGACGTGAGGTCATAATCTTGCAACACCT 416
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 511 ACTCATACGTCGCAAAGACATCGAAGACGTGAGACGTGAGGTCATGATCTTGCAACACCT 570
Query 417 TACTGGTCAACCGAACATCGTCGAGTTTCGAGGTGCGTATGAAGACAAAGACAATCTTCA 476
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 571 TACTGGTCAACCAAACATAGTCGAGTTTCGAGGCGCGTATGAAGACAAAGACAATCTTCA 630
Query 477 TTTGGTTATGGAGCTCTGTTCTGGAGGAGAGCTGTTTGATCGTATCATCAAGAAAGGAAG 536
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 631 TTTGGTTATGGAGCTCTGTTCTGGAGGAGAGCTTTTTGATCGTATTATCAAGAAAGGAAG 690
Query 537 TTACTCTGAGAAAGAAGCTGCTAATATCTTCAGACAGATCGTTAATGTTGTTCATGTTTG 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 TTACTCTGAGAAAGAAGCTGCTAATATCTTCAGACAGATCGTTAATGTTGTTCATGTTTG 750
Query 597 TCATTTCATGGGCGTTGTTCATAGAGACTTAAAGCCTGAGAATTTCTTGCTTGTTAGTAA 656
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 TCACTTCATGGGCGTTGTTCATAGAGACTTAAAGCCTGAGAATTTCTTGCTTGTTAGTAA 810
Query 657 TGAAGAAGATTCTCCCATCAAAGCAACAGATTTTGGCCTCTCTGTTTTCATCGAAGAAGG 716
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 811 CGAAGAAGATTCTCCAATCAAAGCAACAGATTTTGGACTCTCTGTTTTCATCGAAGAAGG 870
Query 717 TAAAGTGTATAGAGATATAGTTGGGAGCGCATACTACGTTGCACCTGAAGTTCTACATCG 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 TAAAGTGTATAGAGATATAGTTGGGAGCGCATACTACGTTGCACCTGAAGTTCTACATCG 930
Query 777 AAGCTACGGGAAAGAGATCGATGTATGGAGTGCAGGTGTCATGCTTTACATTCTTCTCAG 836
|| |||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 931 AAACTACGGGAAAGAAATCGATGTATGGAGCGCGGGTGTTATGCTTTACATTCTTCTCAG 990
Query 837 TGGTGTTCCTCCATTTTGGGGAGAGACCGAGAAGACTATATTTGAGGCGATCTTAGAAGG 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 TGGTGTTCCTCCATTTTGGGGAGAGACCGAGAAGACTATATTTGAGGCGATCTTAGAAGG 1050
Query 897 CAAGCTGGATCTTGAAACTTCTCCTTGGCCTACTATATCGGAAAGCGCAAAAGATTTGAT 956
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051 AAAGCTGGATCTTGAAACTTCTCCTTGGCCTACTATATCGGAAAGCGCAAAAGATTTGAT 1110
Query 957 TAGAAAAATGTTGACAATAGATCCTaaaaaaaGGATTACCGCAGCTGAAGCACTTGAGCA 1016
||||| ||||||| || |||||||||||||||||| |||||||||||||||||||||||
Sbjct 1111 AAGAAAGATGTTGATAAGAGATCCTAAAAAAAGGATAACCGCAGCTGAAGCACTTGAGCA 1170
Query 1017 TCCATGGATGACAAACAGCAAAATATCAGATAAACCAATCGATAGCGCTGTTCTTATTAG 1076
||||||||||||| ||| |||||| || |||||||||||| |||| ||||||||| ||||
Sbjct 1171 TCCATGGATGACAGACACCAAAATTTCTGATAAACCAATCAATAGTGCTGTTCTTGTTAG 1230
Query 1077 GATGAAGCAGTTCCGTGCAATGAACAAGCTCAAGAAACTTGCCTTGAAGGTGATAGCGGA 1136
||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 GATGAAGCAATTCCGCGCGATGAACAAGCTCAAGAAACTTGCCTTGAAGGTGATAGCGGA 1290
Query 1137 AAACTTATCGGAAGAAGAGATAAAGGGATTAAAGCAAATGTTTAAGAACATGGATACAGA 1196
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 1291 AAACTTATCGGAAGAAGAGATAAAAGGATTAAAGCAAACGTTTAAGAACATGGATACAGA 1350
Query 1197 TGGAAGTGGCACAATCACTTTTGATGAACTAAGAAGCGGGTTACATCGTCTTGGATCTAA 1256
|| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1351 TGAAAGTGGCACCATCACTTTTGATGAACTAAGAAACGGGTTACATCGTCTTGGATCTAA 1410
Query 1257 GCTTTCAGAATCTGAAATCAAACAACTCATGGAAGCTGCCGATGTAGACAAAAGTGGGAC 1316
|||| | || ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1411 GCTTACGGAGTCTGAAATCAAACAACTCATGGAAGCTGCTGATGTGGACAAAAGTGGGAC 1470
Query 1317 GATTGACTACATTGAGTTTATAACTGCAACAATGCATCGCCATAGATTGGAGAAAGAAGA 1376
|||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1471 GATTGATTACATTGAGTTTGTAACTGCAACAATGCATCGTCATAGATTGGAGAAAGAAGA 1530
Query 1377 GAATTTGATAGAAGCATTTAAATTCTTCGACAAAGACAGAAGCGGATTTATCACAAGAGA 1436
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||
Sbjct 1531 GAATTTGATAGAAGCATTTAAATACTTCGACAAAGACAGAAGCGGTTTTATCACAAGGGA 1590
Query 1437 CGAGCTTAAACATTCCATGACTCAGTACGGTATGGGTGATGATGCGACCATAGATGAAGT 1496
|||||||||||| ||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct 1591 CGAGCTTAAACACTCCATGACTGAGTATGGCATGGGTGATGATGCGACCATAGATGAAGT 1650
Query 1497 TCTCAATGATGTTGATGCGGACAAT 1521
| |||||||||||||| | ||||||
Sbjct 1651 TATCAATGATGTTGATACCGACAAT 1675
> AT1G76050.2 | Symbols: | Pseudouridine synthase family protein
| chr1:28540823-28543227 FORWARD LENGTH=1616
Length=1616
Score = 1166 bits (631), Expect = 0.0
Identities = 734/784 (94%), Gaps = 6/784 (1%)
Strand=Plus/Plus
Query 1522 CTGCCGAGTttctcgttaatctccgtcaaatctcttcgttatccttcttcttctccttct 1581
||||||||||||||||||| | ||| |||||||||||||||| | |||||||||||||
Sbjct 54 CTGCCGAGTTTCTCGTTAACCACCGCCAAATCTCTTCGTTAT-C--CTTCTTCTCCTTCG 110
Query 1582 tcgtctctctctctcttcttctccttcttcCCTAGGGTTTCGAATTTCGTCAGAGCAAGT 1641
|||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 111 TCGTCTCTCTCTATCTTCTTCTCCTTCTTCCCTAAGGTTTCTAATTTCGTCAGAGCAAGT 170
Query 1642 TCCGGAATCCCCAATTTGGTCGCCTGTAGTCCGACGGAGATTATCATCCCCAGAGTTAAT 1701
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 171 TCCGGAATCCCCAATTTGGTCGCCTGTAGTCCGACAGAGATTATCATCCCCAGAGTTAAT 230
Query 1702 AACGCCGGACTCAGAATCGAGGAGACAGTAGACGCCTTGAAAGGGAAGATTCGTCTTGAT 1761
||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||
Sbjct 231 AACGCCGGACTCAGAATCGAGGAGATAGTAGACGCCGCGAAAGGCAAAATTCGTCTTGAT 290
Query 1762 TCATGGATCTCTTCTCGTGTCAATGGCGTTAGTCGAGCTCGTGTCCAGTCCAGTATACGA 1821
|||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||
Sbjct 291 TCATGGATCTCTTCTCGTATCAATGGCGTTAGCCGAGCTCGTGTACAGTCGAGTATACGA 350
Query 1822 TTGGGACTCGTTACCGTCAATGGTCGAGTCGTTGATAAGGTTTCGCACAATGTCAAAGCT 1881
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||
Sbjct 351 TTGGGACTCGTTACCGTCAATGGTCGTGTCGTTGATAAGGTTTCACACAATGTCAAATCT 410
Query 1882 GGCGATGAGGTTAATTGTACAATTTCAGAGCTTCAACCTTTGAAAGCAGAAGCTGAAGAC 1941
|| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 411 GGTGATGAGGTTAATTGTACGATATCAGAGCTTCAACCTTTGAAAGCTGAAGCTGAAGAT 470
Query 1942 ATACCATTGGATATAGTTTATGAAGATAAACATGTTCTTGTTGTTAACAAACCAGCTCAC 2001
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 471 ATACCATTAGATATAGTTTATGAAGATAAACATGTTCTTGTTGTTAACAAACCAGCTCAC 530
Query 2002 ATGGTTGTTCATCCTGCGCCTGGGAATCCTACTGGCACGCTTGTTAATGGCATACTTCAC 2061
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 531 ATGGTCGTTCATCCTGCGCCTGGGAATCCTACCGGCACGCTTGTTAATGGCATACTTCAT 590
Query 2062 CATTGCAGTCTTCCTTGTGTTTCTTATTCCAACGCGGAA-AA--TGATGATTCCGATGAA 2118
||||| ||||||||||||||| |||||| ||| | ||| || ||||||||||||||||
Sbjct 591 CATTGTAGTCTTCCTTGTGTTGATTATTCGAACTCAGAAGAAGATGATGATTCCGATGAA 650
Query 2119 GAAACTTTTTCAGATGATGAAGAGATGACGACTTCTTCTAGTTCATATGCTGCTTCTGTT 2178
||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct 651 GAAACATTTTCAGATGATGAAGAGATGACTACCTCTCCTAGTTCATATGCTGCTTCTGTT 710
Query 2179 CGTCCTGGTATTGTTCATAGGCTGGATAAAGGCACAACTGGATTGCTTGTTGTAGCCAAG 2238
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 711 CGTCCTGGTATTGTTCATAGGTTGGATAAAGGCACAACTGGATTGCTCGTTGTAGCCAAG 770
Query 2239 GATGAACATTCCCATGCCCATCTAGCAGAACAGTTTAAGCTACACACAATTGAGAGAGTA 2298
||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 771 GATGAACATTCTCATGCCCATTTAGCAGAACAGTTCAAGCTACACACAATTGAGAGAGTA 830
Query 2299 TATG 2302
||||
Sbjct 831 TATG 834
Score = 750 bits (406), Expect = 0.0
Identities = 446/466 (96%), Gaps = 0/466 (0%)
Strand=Plus/Plus
Query 2302 GGGCGTATTGAGATACCAATTGGTCGTGATTCGAGTAATCGGATACGTATGGCTGCTATA 2361
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 870 GGGCGTATTGAGATACCGATTGGTCGTGATTCGAGTAATCGGATACGTATGGCTGCTATT 929
Query 2362 CCTGGAGGAGTAAGTGGTGGAAGAGCCCGCCATGCTGCTAGTAGGTATAAGGTAATCGAA 2421
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 CCTGGAGGAGTAAGGGGTGGAAGAGCCCGCCATGCTGCTAGTAGGTATAAGGTAATCGAA 989
Query 2422 ACATTCGCTGGAGGTGGCTCTGCATTGGTTGAGTGGAGACTGGAAACCGGCCGTACACAT 2481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 990 ACATTCGCTGGAGGTGGCTCTGCATTGGTTGAGTGGAGACTGGAAACCGGCCGTACTCAT 1049
Query 2482 CAGATACGTGCTCATGCTAAGTATATGGGAGTTCCTCTATTGGGTGATGAAGTCTATGGT 2541
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 1050 CAGATACGTGCTCATGCTAAATATATGGGAGTTCCTCTATTGGGTGACGAAGTGTATGGT 1109
Query 2542 GGGACAAAAGGCATGGCCCTTTCCCTTCTGCAGAAGAGAGTCTCCCGCAGTGATCAAGAA 2601
|| |||||| ||||||||||||| ||| ||||||| |||||||||||||| |||||||||
Sbjct 1110 GGAACAAAAAGCATGGCCCTTTCTCTTTTGCAGAAAAGAGTCTCCCGCAGCGATCAAGAA 1169
Query 2602 GAGATCGTAGAGCTGATTTCCAGAATGGATAGGCCTTGCCTTCATGCTATAGTTCTCGGT 2661
|||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1170 GAGATCATAGAGCTTATTTCCAGAATGGATAGACCTTGCCTTCATGCTATAGTTCTCGGC 1229
Query 2662 TTTACACATCCGTGCACTGGGGAAATTGTAAAGTTTTCATGTCCACCGCCTTCAGATCTT 2721
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1230 TTTACACATCCGTGCACTGGGGAAATAGTAAAGTTTTCATGTCCACCGCCTTCAGATCTT 1289
Query 2722 GCAGAGATAGTAGGCTTGCTTCGTAGAAGCGGATTAGAAAAAGTAA 2767
|| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1290 GCTGAGATAGTAGGCTTGCTTCGTAGAAGCGGATTATAAAAAGTAA 1335
> AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase
33 | chr1:18781914-18784582 FORWARD LENGTH=2063
Length=2063
Score = 379 bits (205), Expect = 7e-104
Identities = 732/978 (75%), Gaps = 69/978 (7%)
Strand=Plus/Plus
Query 420 TGGTCAACCGAACATCGTCGAGTTTCGAGGTGCGTATGAAGACAAAGACAATCT-T-CAT 477
||| ||||| ||||| || |||||| ||| || |||||||| ||| || || | ||
Sbjct 687 TGGACAACCTAACATTGTTGAGTTTAAAGGAGCTTATGAAGA-TGAGA-AAGCTGTGAAT 744
Query 478 TTGGTTATGGAGCTCTGTTCTGGAGGAGAGCTGTTTGATCGTATCATCAAG-AAA-GGA- 534
|||||||||||||| ||| |||| || || |||| ||| | || | || ||| |||
Sbjct 745 TTGGTTATGGAGCTTTGTGCTGGTGGTGAATTGTTCGATAGGAT--TTTAGCAAAGGGAC 802
Query 535 AGTTACTCTGAGAAAGAAGCTGCTAATATCTT-CAGACAGATCGTTAATGTTGTTC-ATG 592
| |||| ||||| || ||||||| | | || |||||||| |||||||||| || ||
Sbjct 803 A-TTACAGTGAGAGAGCAGCTGCTTCTGT-TTGTAGACAGATTGTTAATGTTG-TCAATA 859
Query 593 TTTGTCATTTCATGGGCGTTG-TTCATAGAGACTTAAAGCCTGAGAATTTCTTGCTTGT- 650
|||||||||||||||| | || | |||||||||||||||||||||||||||||| || |
Sbjct 860 TTTGTCATTTCATGGGTG-TGATGCATAGAGACTTAAAGCCTGAGAATTTCTTG-TTATC 917
Query 651 TAGTAATGA--AGAAGATTCTCCCATCAAAGCAACAGATTTTGGCCTCTCTGT-TTTCAT 707
||| || || ||||| ||| |||||||| || ||||| || | || || ||| ||
Sbjct 918 TAGCAAAGATGAGAAGGCTCTT--ATCAAAGCCACTGATTTCGGATTATCAGTCTTT-AT 974
Query 708 CGAAGAAGGTAAAGTGTATAGAGATATAGTTGGGAGCGCATACTACGTTGCACCTGAAGT 767
||||||||| | |||||||| ||||||||||||||| ||||| || ||||| ||||||||
Sbjct 975 CGAAGAAGGGAGAGTGTATAAAGATATAGTTGGGAGTGCATATTATGTTGCTCCTGAAGT 1034
Query 768 TCT-ACATCGAAGCTACGGGAAAGAGATCGATGTATGGAGTGCAGGTGTCATGCTTTACA 826
| | | | || || || || ||||| |||||| |||||||||| || | || || ||||
Sbjct 1035 TTTGA-AGCGGAGATATGGTAAAGAAATCGATATATGGAGTGCTGGAATTATACTATACA 1093
Query 827 TTCTTCTCAGTGGTGTTCCTCCATTTTGGGGAGAGACCGAGAA-GACTATATTTGAGGCG 885
|||| || |||||||| ||||| ||||||| || || ||||| | |||||||| ||
Sbjct 1094 TTCTACTTAGTGGTGTGCCTCCGTTTTGGGCTGAAACGGAGAAAGGG-ATATTTGATGCT 1152
Query 886 ATCTTAGAAGGC-AAGCTGGATCTT-GAAACTTCT-CCTTGGCC-TACTATATCGGAA-A 940
|| || ||||| || | || ||| ||| | | |||||||| | | || || || |
Sbjct 1153 ATATTGGAAGGTGAAA-TCGA-CTTTGAATCC-CAACCTTGGCCCT-CAATTTCC-AATA 1207
Query 941 GCGCAAAAGATTTGATTA-GAAAAATGTTGACA-ATAGATCCTaaaaaaaGGATTACCGC 998
| || ||||||||| | | | | |||||||||| | |||||| |||| | ||||| | ||
Sbjct 1208 GTGCTAAAGATTTGGT-ACGTAGAATGTTGACACA-AGATCCGAAAAGACGGATTTCTGC 1265
Query 999 AGCTGAAGCACTTGAGCATCCATGGATGACA-AACA-GCAAAAT-ATCAGATAAACCAAT 1055
||||||| ||| ||||||||||| | | | || | | || ||| ||||| || ||
Sbjct 1266 TGCTGAAGTTCTTAAGCATCCATGGCTAAGAGAAGGTGGAGAAGCATCGGATAAGCCTAT 1325
Query 1056 CGATAGCGCTGTTCTTATTA-GGATGAAGCAGTTCCGTGCAATGAACAAGCTCAAGAAAC 1114
||||| |||||||| | | |||||||||| || | || ||||| || || |||||||
Sbjct 1326 TGATAGTGCTGTTCTC-TCAAGGATGAAGCAATTTAGAGCGATGAATAAACTAAAGAAAC 1384
Query 1115 TTGCCTTGAAGGTGATAGCGGAAAAC-TT-AT-CGGAAGAAGAGATAAAGGGATTAAAG- 1170
|||| || ||||| || ||||| ||| || | |||||||| | | || || ||||||
Sbjct 1385 TTGCTTTAAAGGTCATTGCGGAGAACATTGACACGGAAGAA-ATACAA-GGC-TTAAAGG 1441
Query 1171 CAAATGTTTAAGAACATGGATACAGATGGA-AGTGGCACAATCACTTTTGATGAACT-AA 1228
| | ||||| || || |||||||| | ||||| || ||||| | || ||| | ||
Sbjct 1442 CGA-TGTTTGCTAATATAGATACAGACA-ATAGTGGTACTATCACATACGAAGAATTGAA 1499
Query 1229 -GAAGCGGGTTA-C-ATCGTCTTGGATCTAAG-CTTTCAGAATCTGAAATCAAACAACTC 1284
|||| | ||| | | || ||||| ||| || | ||| ||||| | ||||| |||
Sbjct 1500 AGAAG-GA-TTAGCCAAA--CTGGGATC-AAGACTCACTGAAGCTGAAGTGAAACAGCTC 1554
Query 1285 ATGGAAGCTGCCGATGTAGACA-AAAGTGGGACGATTGACTACATTGAGTTTATAACTGC 1343
||||| ||||| || || || ||| |||| | || || |||||||||||||| |||||
Sbjct 1555 ATGGATGCTGCTGACGTTGATGGAAA-TGGGTCAATAGATTACATTGAGTTTATTACTGC 1613
Query 1344 AACAATGCATCGCCATAG 1361
|||||||||| | |||||
Sbjct 1614 AACAATGCATAGACATAG 1631
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138761764338
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5