BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg339915

Length=312
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G77540.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) sup...   505    1e-142


> AT1G77540.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) superfamily 
protein | chr1:29137626-29138212 REVERSE LENGTH=511
Length=511

 Score =  505 bits (273),  Expect = 1e-142
 Identities = 299/312 (96%), Gaps = 0/312 (0%)
 Strand=Plus/Plus

Query  1    ATGGCGACCGAGCCACCGAAGATAGTGTGGAACGAAGGGAAACGGCGATTCGAGACGGAG  60
            |||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct  64   ATGGCGACAGAGCCACCAAAGATAGTGTGGAACGAAGGCAAAAGGCGATTCGAGACGGAG  123

Query  61   GATCACGAAGCTTTCATAGAATACAAGATGAGAAACAACGGTAAAGTGATGGATCTGGTT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  124  GATCACGAAGCTTTCATAGAATACAAGATGAGAAACAACGGTAAAGTGATGGATCTGGTT  183

Query  121  CATACTTACGTTCCTTCCTCCAAACGAGGATTAGGTTTAGCTTCTCATCTCTGCGTCGCC  180
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct  184  CATACTTACGTTCCTTCATTCAAACGAGGATTAGGTTTAGCTTCTCATCTCTGCGTCGCC  243

Query  181  GCTTTCGAACACGCCTCTTCTCACTCCATCTCCGTCATCCCTTCCTGCTCCTATGTTTCG  240
            ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct  244  GCTTTCGAACACGCCTCTTCTCACTCCATCTCCATCATCCCTTCTTGCTCCTACGTTTCG  303

Query  241  GAAACGTTTCTTCCTCGAAACCCGTCATGGAAGCCTCTGGTTCATTCAGAGGTATTCAAG  300
            || |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct  304  GATACGTTTCTTCCTCGAAACCCATCATGGAAGCCTCTGATTCATTCAGAGGTATTCAAG  363

Query  301  TCTAGCATCTGA  312
            |||||||| |||
Sbjct  364  TCTAGCATTTGA  375



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14477111712


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5