BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg340192 Length=1158 Score E Sequences producing significant alignments: (Bits) Value AT1G80290.2 | Symbols: | Nucleotide-diphospho-sugar transferas... 1448 0.0 > AT1G80290.2 | Symbols: | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:30188364-30189574 FORWARD LENGTH=1070 Length=1070 Score = 1448 bits (784), Expect = 0.0 Identities = 998/1097 (91%), Gaps = 31/1097 (3%) Strand=Plus/Plus Query 66 AACACCAACTAGTCAATCGGAATTGCAACTCTCTCCGTCTCGAGATCCCGATGCCGGAAC 125 ||| |||||||||||||||||||| ||| ||||| | | ||||| | |||||||||| Sbjct 1 AACTCCAACTAGTCAATCGGAATTCCAAATCTCT-AGAC-GGAGATTCTGATGCCGGAAT 58 Query 126 ACCATCAGCTCCTGCTTCTTCCGAGGTTGATATGGGAGT-TACTAGAAGT-AGGTTCTAT 183 |||||| | ||||||||| |||||||||||| | | | || ||||||| | Sbjct 59 GCCATCA------G---CTTCCGAGGCTGATATGGGAGTCAAATCG--GTGAGGTTCTCT 107 Query 184 ATCTGGTTCCTGTTCCTCTTTGTTACGGATCTCGTGTCCTGCCGCACGCTCTCAGTGGAT 243 ||||||||||| || || |||||||||||||||||| || ||||||||||||| |||| Sbjct 108 ATCTGGTTCCT-TT--TCGTTGTTACGGATCTCGTGTTTTGTCGCACGCTCTCAGGGGAT 164 Query 244 CCGGATCCGTGTGATTCAATGAACCAGAGAGACTTTCAGAAACTTAGATCGGATCAAATC 303 || ||||| |||||| ||| |||||||||||| ||||| ||||| ||||||||||| ||| Sbjct 165 CCAGATCCATGTGATGCAACGAACCAGAGAGAATTTCAAAAACTCAGATCGGATCAGATC 224 Query 304 ACCGTTCTAATCAACGGTTACTCTGAATACCGGATTCCTCTTCTCCAAACCATCGTGGCC 363 |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 225 ACCGTTCTAATCAATGGTTACTCAGAATACCGGATTCCTCTTCTGCAAACCATCGTGGCC 284 Query 364 TCGTATTCTTCATCCTCAATCGTATCATCCATCTTAGTCCTATGGGGTAACCCTAGCACA 423 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 285 TCTTATTCTTCATCCTCGATCGTATCCTCCATCTTAGTCCTATGGGGTAACCCTAGCACA 344 Query 424 CCTGATCAACTACTTGACCACTTGTATCAGAATCTCACTCAGTACTCGCCTGGTTCTGCT 483 |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct 345 CCTGATCAACTACTTGACCAGTTGTATCAGAATCTGACTCAGTATTCGCCTGGTTCTGCT 404 Query 484 TCCATCTCTCTAATTCAGCAATCTTCTAGCAGCCTCAACGCCAGATTCCTCCCTCGTTCC 543 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 405 TCCATCTCTCTAATTCAGCAATCTTCGAGCAGCCTCAACGCTAGATTCCTCCCTCGTTCC 464 Query 544 TCTGTAGACACTCGTGCTGTTCTGATATGTGATGATGATGTCGAGATTGATCGGAGATCG 603 ||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||| Sbjct 465 TCTGTAGACACTCGTGCTGTTTTGATATGTGATGATGACGTCGAGATTGACCAGAGATCG 524 Query 604 TTGGAATTCGCATTTTCTGTGTGGAAGTCCAATCCTGATCATCTTGTAGGAACGTTTGTG 663 ||||| || || ||||| ||||||||||| |||||||||| |||||||||||||||||| Sbjct 525 TTGGAGTTTGCGTTTTCAGTGTGGAAGTCGAATCCTGATCGCCTTGTAGGAACGTTTGTG 584 Query 664 AGGTCACACGGTTTCGATTTGCAGGGCAAAGAGTGGATTTACACTGTGCATCCAGATAAA 723 |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 585 AGGTCACACGGTTTCGATTTGCAGGGGAAAGAGTGGATATACACTGTTCATCCAGATAAA 644 Query 724 TACTCCATCGTGCTGACCAAGTTCATGATGATGAAACAAGATTATCT-TTATGAGTATAG 782 ||||| || ||| ||||||||||||||||||||||||| |||||||| || ||||||||| Sbjct 645 TACTCGATTGTGTTGACCAAGTTCATGATGATGAAACAGGATTATCTGTT-TGAGTATAG 703 Query 783 CTGCAAGGGAGGTGTGGAGATGGAGGAGATGAGGATGATTGTGGACCGAATGCGTAACTG 842 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 704 CTGCAAGGGAGGTGTGGAGATGGAGGAGATGAGGATGATTGTGGACCAAATGCGTAACTG 763 Query 843 CGAGGATATACTGATGAATTTTGTAGCTGCAGATAGGTTAAGGGCAGGGCCAATCATGGT 902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 CGAGGATATACTGATGAATTTTGTAGCTGCAGATAGGTTAAGGGCAGGGCCAATCATGGT 823 Query 903 TGGAGCAGAGAGAGTTAGGGATTGGGGAGATGCGCGTAACGAAGAAGAACAAGTAGTTGA 962 |||||| |||||||||||||||||||||||||||||||||||||||| | | | | Sbjct 824 TGGAGCTGAGAGAGTTAGGGATTGGGGAGATGCGCGTAACGAAGAAGTA---G-A----A 875 Query 963 TGAGAGAGTAAGAGATGCAGGATTGAGCAGTAGAAGAGTGGAACATAGGAAGAGAAGAGG 1022 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 876 -GAGAGAGTAAGAGACGTGGGATTGAGCAGTAGAAGAGTGGAACATAGGAAGAGAAGAGG 934 Query 1023 GAAGTGCATCAGGGAGTTTCATAGAGTTATGGGGAAGATGCCATTGATGTATAGTTATGG 1082 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 935 GAATTGCATTAGGGAGTTTCATAGAGTTATGGGGAAGATGCCATTGATGTATAGTTATGG 994 Query 1083 TAAGGTTGTCAACTCTGTTGGGGAACAAGGATTGTGTCGTAAAGCCGG-AAAGCTTGTGT 1141 ||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct 995 TAAAGTTGTCAACTCTGTTGGGGAACAAGGATTGTGTCGTAAAGCCGGCAAA-CTTGTCT 1053 Query 1142 TTTGTGACCGAGATTGA 1158 ||||||| ||||||||| Sbjct 1054 TTTGTGATCGAGATTGA 1070 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56827016940 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5