BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg340259
Length=1773
Score E
Sequences producing significant alignments: (Bits) Value
AT3G01880.1 | Symbols: | Plant protein of unknown function (DU... 2512 0.0
AT3G01870.1 | Symbols: | Plant protein of unknown function (DU... 1033 0.0
> AT3G01880.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr3:307782-309560 FORWARD LENGTH=1779
Length=1779
Score = 2512 bits (1360), Expect = 0.0
Identities = 1629/1757 (93%), Gaps = 25/1757 (1%)
Strand=Plus/Plus
Query 1 ATGCAATTCTTGAT-TGAAACCTACCTCAAATCTCTATTGTTTTTTGTTCCTCTATTTGT 59
|||||| ||||| | |||||||||| | |||| |||||||||||||||| |||||||||
Sbjct 1 ATGCAACTCTTG-TATGAAACCTACTTAAAATTTCTATTGTTTTTTGTTTTTCTATTTGT 59
Query 60 TAAGCAGTTGTCATGGGCTGAAACTGGAACTAA-CCTCTTGACCAACAGTTCCAATGTAA 118
|||||| ||||||||||| |||||||||||||| ||| |||||||||| |||| | ||||
Sbjct 60 TAAGCAATTGTCATGGGCAGAAACTGGAACTAACCCT-TTGACCAACATTTCCTACGTAA 118
Query 119 ATTCTTTAGGATATACATTCAAATATCCATATCTTTTGTCTAATGGTTTACCGGTGGAAA 178
|||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 119 ATTCTTTAGGGTATCCATTCAAATATCCTTATCTTTCGTCTAATGGTTTACCGGTGGAAA 178
Query 179 CAACG-TTTAAATCTCCTAGTCTTTTGCCTAGTATGCCTTCCGATGGTGGAAATTTTGGC 237
||| | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 179 CAA-GCTTTAAATTTCCTAGTCCTTTGCCTAGTATGCCTTCCGATGGTGGAAATTTTGGC 237
Query 238 AAAAGAAGCATTGATTTGGGAGGTCTTGAGGTTACTCAACTCTCTATCTCAAACTCAACA 297
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 238 AAAAGAAGCATTGATATGGGAGGTCTTGAGGTTACTCAAATCTCTATCTCAAACTCAACA 297
Query 298 TCACACAGAGTGTGGAGAACTTATGAAGGAGGGCCGAATAACATGGGAGTCAGCATCTTC 357
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 298 TCACACAGAGTGTGGAGAACTTATGAAGGAGGGCCGGATAACATGGGAGTCAGCATCTTT 357
Query 358 GAACCTACTGCTCTTCCTCGTAACTTT-TTAAAACTTGGCTTCTATGCACAACCCAACAA 416
||||| ||| || |||||||||| ||| || ||||||||||||||||||||||| |||||
Sbjct 358 GAACCAACTACTATTCCTCGTAA-TTTCTTCAAACTTGGCTTCTATGCACAACCTAACAA 416
Query 417 CCGACAGCTTTTCGGTTGGATTCTTGTCGCAAAAGACGTAGCCGGAAGTAATTTAAGACC 476
|||||||||||| |||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct 417 CCGACAGCTTTTTGGTTGGATTCTTGTTGCAAAAGACGTATCGGGAAGTAATTTAAGACC 476
Query 477 ACCAGTCGACTACACTGAAGTTGGAAACACTACATCACTGATTAGTATTAAACAAGATGG 536
|||||||||||||||||||||||||||||||||| || || | ||| |||||||| ||
Sbjct 477 ACCAGTCGACTACACTGAAGTTGGAAACACTACAACATTG-CT--TATCAAACAAGAGGG 533
Query 537 GCCAGCGTATTTTTGGCAGCCCCTATGTCCTAATGGGTATCAAGCGGTTGGTCTATATGT 596
||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 534 GCCTGCATATTTTTGGCAGCCCCTATGTCCTAATGGATATCATGCGGTTGGTCTATATGT 593
Query 597 CACTACTTCTCCTGTGAAGCCCTCTTTGGGACAAGATTCTATTAA-CTGCGTTAGATCTG 655
||||||||||||| |||||||||||||||||||| |||||| ||| ||| ||| ||||||
Sbjct 594 CACTACTTCTCCTATGAAGCCCTCTTTGGGACAAAATTCTA-TAAGCTGTGTTCGATCTG 652
Query 656 AACTTACAGAAAAAAGTGAAGCTGATACATGGGTATGGAGGATAAAAGATATGACTATTT 715
| || |||||| | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 653 ATCTCACAGAACAGAGTGAAGCCGATACATGGGTATGGAGGATAAAAGATATGACTATTT 712
Query 716 CTAGTTTGAGACCGGCCACGAGAGGAGTAGAAGCAACAGGTGTGTACACAGGGACATTCA 775
||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||
Sbjct 713 CTAGTTTGAGACCGGCCACGAGAGGAGTAGAGGCGACAGGTGTGTTCACAGGGACATTCA 772
Query 776 GTTTCAAA-AACCTAAAAC-TTC-TCC-C-T---CCTCCTTTATTCTGCTTGAAAAATAT 827
| | |||| || || |||| ||| ||| | | ||||||||||||||||| |||||||
Sbjct 773 GCTGCAAACAA-CT-AAACTTTCTTCCTCATCCCCCTCCTTTATTCTGCTTAAAAAATAC 830
Query 828 AAAATTTGACTTGTCGAGCATGCCAAGCGAAAACCAAACTAGAGTTTTGTTTCAAACATA 887
||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| ||
Sbjct 831 AAAATTTGACTTGTCAAGCATGCCAAGCGAAAATCAAACTAGAGTTTTGTTTAAAACGTA 890
Query 888 TTCTCCTTGGATATATTTACACCCACAAGAAGATTTTCTTCCTTCCTCCGTCGATTGGGT 947
||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||||
Sbjct 891 TTCTCCTTGGATATATTTACACCCAAAAGAAGATTTCCTTCCTTCCTCTGTCAATTGGGT 950
Query 948 TTTCGCTAATGGTGCGTTGCTATACCAGAAAGGAAACGAATCCAACCCCGTCCTGATACA 1007
||||||||| ||||| |||||| || |||||||||||||||||| ||| |||| ||||||
Sbjct 951 TTTCGCTAACGGTGCCTTGCTACACAAGAAAGGAAACGAATCCATCCCGGTCCCGATACA 1010
Query 1008 TCCAAATGGTTCAAACCTTCCACAAGGTGGTTGCAATGATGACTTATTTTGGTTAGATTA 1067
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1011 TCCAAATGGTTCAAACCTTCCACAAGGAGGTTGCAATGATGACTTGTTTTGGTTAGATTA 1070
Query 1068 TCTAGTCGATGAAAAGGCAAGAGAAAAAGTTAAGAGGGGAGATTTAGGGAGCACTAAGGT 1127
|||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||
Sbjct 1071 TCTAGTCGATAAAAAGGCTAGAGAAAAGGTTAAGAGGGGAGATTTAGAGAGCACTAAGGT 1130
Query 1128 GTATCTACACATTAAACCAATGTTTGGAGCTACTTTCACAGATATTGTTGTATGGCTATT 1187
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1131 GTATCTACACATCAAACCAATGTTTGGAGCTACTTTCACAGATATTGTAGTATGGCTATT 1190
Query 1188 CTTCCCCTATAACGGAAATGCACATTTGAAATTTTTATTCATCAAGAGCATGTCGCTAGG 1247
||| ||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||
Sbjct 1191 CTTTCCCTATAACGGAAATGCACATTTAAAATTTTTGTTTATCAAGAGCCTGTCGCTAGG 1250
Query 1248 AAATATTGGCGAGCATGTTGGAGACTGGGAACATGTTACATTGCGCATCAGCAACTTCAA 1307
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1251 AAATATTGGCGAGCATGTTGGAGACTGGGAACACGTTACATTACGCATCAGCAACTTCAA 1310
Query 1308 TGGTGAGTTATGGCGTGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATG 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311 TGGTGAGTTATGGCGTGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATG 1370
Query 1368 CGATCTAGAGTTCATACAAGGTGGAAACAAACCAGTAGTATATTCGTCTCTCCATGGCCA 1427
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1371 CGATCTAGAGTTCATGCAAGGTGGAAACAAACCAGTAGTATATTCGTCTCTTCATGGGCA 1430
Query 1428 TGCAATGTTCTCCAAACCTGGAGTCGTGTTGCAAGGCGGCGGCAAAAGTGGAATAAGGAA 1487
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1431 TGCAATGTTCTCCAAACCTGGAGTCGTGTTGCAAGGTGGCGGCAAAAGTGGAATAAGGAA 1490
Query 1488 CGACATGGCAAGAAGCGACAAATTCTTTGACGCAAGTATTGGATATGAAGTGATTGCGGG 1547
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1491 CGACATGGCAAGAAGCGACAAATGCTTTGACGCAGGTATTGGATATGAAGTGATTGCGGG 1550
Query 1548 GCCGGGCGTGGTTGAGCCACCGTGGCTGAACTATTTTAGGAAATGGGGACCTCGAGTCCA 1607
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1551 ACCTGGCGTGGTTGAGCCACCGTGGCTGAATTATTTTAGGAAATGGGGACCTCGAGTCCA 1610
Query 1608 TTACAACATTGACA-AGTTTCTCAACTCTGTAGCTAAGATTTTGCCCATCTTTTTACGGA 1666
||||| ||||||| | |||||||||||||| || |||||||||||||||||||||||||
Sbjct 1611 TTACAGGATTGACATA-TTTCTCAACTCTGTCGCAAAGATTTTGCCCATCTTTTTACGGA 1669
Query 1667 AAGGTTTGCGAAAACTCATAAACAAAATTCCTTTAGAAGTGCTTGGTCAAAATGGTCCAA 1726
||||||||||||||||||| |||||||||||||||||| ||| |||||| |||||||||
Sbjct 1670 AAGGTTTGCGAAAACTCATCAACAAAATTCCTTTAGAAATGCGGGGTCAAGATGGTCCAA 1729
Query 1727 CTGGTCCCAAAGTTAAG 1743
|||||||||||||||||
Sbjct 1730 CTGGTCCCAAAGTTAAG 1746
> AT3G01870.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr3:305131-307225 FORWARD LENGTH=2095
Length=2095
Score = 1033 bits (559), Expect = 0.0
Identities = 1149/1428 (80%), Gaps = 63/1428 (4%)
Strand=Plus/Plus
Query 201 TTTGCCTAGT-ATGCCTTCCGATGGTGGAAATTTTGGCAAAAGAAGCATTGATTTGGGAG 259
||| ||| || || ||||| | ||||||||||||||| ||| |||| || ||| | ||||
Sbjct 334 TTTACCT-GTCATCCCTTCGGGTGGTGGAAATTTTGGGAAAGGAAGGATAGATCTCGGAG 392
Query 260 GTCTTGAGGTTACT-CAACTCTCTATCTCAAACTCAACATCACACAGAGTGTGGAGAACT 318
|||||||||| | | ||| |||| ||||||| |||||||||||| ||||| ||||| ||
Sbjct 393 GTCTTGAGGTGA-TCCAAGTCTCCATCTCAACCTCAACATCACAAAGAGTATGGAGGACA 451
Query 319 TATGAAGGAGG-GCCGAATAACATGGGAG-TCAGC-ATCTTCGAACCTACTGC--TCTTC 373
|| || ||||| ||| | |||||||| | || | |||||| |||| | | | |||||
Sbjct 452 TACGAGGGAGGTCCCG-ACAACATGGG-GCTC-TCTATCTTCCAACC-AAT-CAATCTTC 506
Query 374 CTCGTAACTTTTTAAAACTTGGCTTCTATGCACAACCCAACAACCGACAGCTTTTCGGTT 433
||| | ||| | | ||||||||||||| |||||||||||||| | |||||| || |
Sbjct 507 CTCCCAGCTTCTCCACTCTTGGCTTCTATGGGCAACCCAACAACCGCCTGCTTTTTGGGT 566
Query 434 GGATTCTTGTC-GCAAAAGACGTAG-CCGGAAGTAATTTAAGACCACCAGTCGACTACAC 491
|| |||||| | |||| |||||| | | |||| || || || ||||| || |||||||
Sbjct 567 GGGTTCTTG-CTGCAAGAGACGT-GTCTGGAAATAGCTTGAGGCCACCCGTTGACTACAT 624
Query 492 TGAAGTTGGAAACACTACATCACTGATTAGTATTAAACAAGATGGGCCAGCGTATTTTTG 551
| |||| ||||||||||||| ||| | ||| || ||||| ||| | || | ||||||
Sbjct 625 TCAAGTCATAAACACTACATCAATGA--A-TATCAACCAAGAAGGGGCTGCTTTTTTTTG 681
Query 552 GCAGCCCCTATGTCCTAATGGGTATCAAGCGGTTGGTCTATATGTCACTACTTCTCCTGT 611
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 682 GCAGCCCCTATGTCCCAATGGATATCAAGCGGTTGGTCTATATGTCACTACTTCTCCTAT 741
Query 612 GAAGCCCTCTTTGGGACAAGATTCTATTAA-CTGCGTTAGATCTGAACTTACAGAAAAAA 670
||||| ||||| | ||||| ||||| || ||||||| |||| || ||||| ||| | |
Sbjct 742 AAAGCCATCTTTAAGTCAAGAATCTAT-AAGCTGCGTTCGATCCGATCTTACGGAACAGA 800
Query 671 GTGAAGCTGATACATGGGTATGGAGGATAAAAGATATGACTATTTCTAGTTTGAGACCGG 730
||||| | ||||||||||| ||| ||| | |||| |||||| | ||||||||||||||||
Sbjct 801 GTGAAACCGATACATGGGTTTGGGGGACAGAAGAAATGACTCTGTCTAGTTTGAGACCGG 860
Query 731 CCA-CGAGAGGAGTAGAAGCAACAGGTGTGTACACAGGGACATTCAGTTTCAAAAACC-T 788
||| | |||||| ||||||||||||||| |||||||||||||||| | | | || |
Sbjct 861 CCAAC-AGAGGAACAGAAGCAACAGGTGTACACACAGGGACATTCAGCTGCCAG--CCAT 917
Query 789 AAAACTTCTC-CCTCCTCCT--T-TATTCTGCTTGAAAAATATAAAATTTGACTTGTCGA 844
||| || | ||||| ||| | | || ||||||||||| | ||||||||||||||| |
Sbjct 918 TGAACATCCCTCCTCCCCCTCCTCTGTTTTGCTTGAAAAACACAAAATTTGACTTGTCTA 977
Query 845 GCATGCCAAGCGAAAACCAAACTAGAGTTTTGTTTCAAACATATTCTCCTTGGATATATT 904
||||||||||| | || ||||||| |||||||||||| | |||||||||||||||||||
Sbjct 978 GCATGCCAAGCCATAATCAAACTACCGTTTTGTTTCAATCGTATTCTCCTTGGATATATT 1037
Query 905 TACACCCACAAGAAGATTTTCTTCCTTCCTCCGTCGATTGGGTTTTCGCTAATGGTGCGT 964
| || ||| | ||||||||| || ||||||| ||||| ||| ||||| | ||||||||
Sbjct 1038 TGCATCCAGATGAAGATTTTATTTCTTCCTCTGTCGACTGGTTTTTCTCCAATGGTGCCC 1097
Query 965 TGCTATACCAGAAAGGAAACGAATCCAACCCCGTCC-TGATACATCCAAATGGTTCAAAC 1023
|| ||| ||||||||| ||||||||||||||||||| || | || || | |||||||||
Sbjct 1098 TGTTATTCCAGAAAGGCAACGAATCCAACCCCGTCCCTG-TGCAACCGGACGGTTCAAAC 1156
Query 1024 CTTCCACAAGGTGGTT-GCAATGATGACTTATTTTGGTTAGATTATCTAG-TCGATGAA- 1080
||||| || || |||| | | ||||| ||||| |||||||| |||| | | ||| ||
Sbjct 1157 CTTCCGCAGGGCGGTTCGGA-TGATGGTTTATTCTGGTTAGACTATCCGGCT-GAT-AAG 1213
Query 1081 AAGGCAAGAGAAAAAG-TTAAGAGGGGAGATTTAGGG-AGCACTAAGGTGTATCTACACA 1138
|| |||| || || | ||||||||||||| ||||| | ||| || |||||||||||||
Sbjct 1214 AACGCAA-AGGAATGGGTTAAGAGGGGAGACTTAGGACA-CACGAAAGTGTATCTACACA 1271
Query 1139 TTAAACCAATGTTTGGAG-CTACTTTCACAGATATTGTTGTATGGCTATTCTTCCCCTAT 1197
| |||||||||||||||| | |||||||| || ||||| || ||| |||||| ||| | |
Sbjct 1272 TCAAACCAATGTTTGGAGGC-ACTTTCACTGACATTGTCGTGTGGATATTCTACCCTT-T 1329
Query 1198 -AACGGAAATGCACATTTGAAATTTTTATTCATCAAGAGCATGTCGCTAGGAAATATTGG 1256
||||| || || | | || ||||||||| |||||||| ||||||| || |||| ||
Sbjct 1330 CAACGGTAACGCCCGCCTCAAGTTTTTATTCTTCAAGAGCCTGTCGCTGGGGGATATCGG 1389
Query 1257 CGAGCATGTTGGAGACTGGGAACATGTTACATTGCGCATCAGCAACTTCAATGGTGAGTT 1316
||| ||| |||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1390 CGAACATATTGGAGACTGGGAACATGTTACGTTGCGCATCAGCAACTTCAACGGAGAGTT 1449
Query 1317 ATGGCGTGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATGCGATCTAGA 1376
|||||| | ||||| ||||| |||||||| |||||| ||||||| ||||||||||| ||
Sbjct 1450 ATGGCGAGCATACTTCTCTGAGCACAGTGGGGGAACTCTAGTGGAGGCATGCGATCTTGA 1509
Query 1377 GTTCATACAAGGTGGAAACAAACCAGT-AGTATATTCGTCTCTCCATGGCCATGCAATGT 1435
||| | |||||||||||||||| || || || |||||||| || || || |||||||
Sbjct 1510 GTT--T-CAAGGTGGAAACAAACTTGTGAGC-TACTCGTCTCTTCACGGACACGCAATGT 1565
Query 1436 TCTCCAAACCTGGAGTCGTGTTGCAAGGCG--G-CGGCAAAAGTGGAATAAGGAACGACA 1492
| || ||||| ||| | ||||||||||||| | ||| ||| | | | ||||||||||||
Sbjct 1566 TTTCAAAACCAGGACTTGTGTTGCAAGGCGATGACGG-AAACG-GCA-TAAGGAACGACA 1622
Query 1493 TGGCAAGAAGCGACAAATTCTTTGACGCAAGTATTGGATATGAAG-TGATTGCGGGGCCG 1551
|||||||||| ||||||||||||||||| || ||| ||||| | || |||| || |||
Sbjct 1623 TGGCAAGAAGTAACAAATTCTTTGACGCAGGTGTTGCTTATGA-GCTGGTTGCAGGACCG 1681
Query 1552 GGCG-TGGTTGAGCCACCGTGGCTGAACTATTTTAGGAAATGGGGACC 1598
|| | | |||||||||||||| |||||||| ||||||||||||||
Sbjct 1682 GG-GATTCAGGAGCCACCGTGGCTCAACTATTTCAGGAAATGGGGACC 1728
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87700352115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5