BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg340279 Length=825 Score E Sequences producing significant alignments: (Bits) Value AT3G01660.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1288 0.0 > AT3G01660.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:245478-246508 FORWARD LENGTH=952 Length=952 Score = 1288 bits (697), Expect = 0.0 Identities = 785/827 (95%), Gaps = 7/827 (1%) Strand=Plus/Plus Query 1 ATGGATTCTCTTCGATTCAACCTCCAACAATATCCAATCCAATTGAAACCCAGAATTCTC 60 ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| Sbjct 55 ATGGATTCTCTTCGATTCAACCTCCAACAATCTCCATTTCAATTGAAACCTAGAATTCTC 114 Query 61 CGACCAAGAATCACTAACAACATATCGAAA-CAAACCGATGAAACCGATCCTCGACCATC 119 |||||||||||||| ||||||||| ||| | || |||||||||||||||||||||||| Sbjct 115 CGACCAAGAATCAC---CAACATATC-AAACCGAATCGATGAAACCGATCCTCGACCATC 170 Query 120 ATCCTCGGCCGGTAAGG-TCCAAAGGTTAGTACTTAACAACGAAGGTCGGACCAAACTAA 178 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 171 ATCCTCGGCCGGT-AGGATCCAAAGGTTAGTACTTAACAACGAAGGTCGGACCAAACTAA 229 Query 179 ACGCCGATCCTGACCGTGAGTTCTATTCATACCCACGGTTCGTGAACCACGTAGACGATG 238 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct 230 ACGCCGATCCTGACCGTGAATTCTATTCATATCCACGGTTCGTGAACCACGTAGATGATA 289 Query 239 GTTTCATATCCTCCTTAACCGAACTATACAGAAACCGGTTGAGACCCGGTTCGATTGTAC 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 290 GTTTCATATCCTCCTTAACCGAACTATACAGAAACCGGTTGAGACCCGGTTCGACTGTAC 349 Query 299 TAGACTTGATGAGCTCATGGGTTAGCCATCTTCCAGAAGAAGTCAAGTACGAGAAAGTGG 358 | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | Sbjct 350 TTGACTTGATGAGCTCATGGGTCAGCCATCTTCCAGAAGAAGTGAAGTACGAGAAAGTAG 409 Query 359 TGGGGCATGGTCTTAACGCACAAGAGCTTGCACGTAACCCTAGACTCGATTACTTCTTCG 418 | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 410 TAGGGCATGGTCTTAACGCACAGGAGCTTGCTCGTAACCCTAGACTCGATTACTTCTTCG 469 Query 419 TCAAGGATCTCAACGAAGATGAGAAATTCGAGTTCGAAGACAAGTATTTCGACGCTGTTT 478 |||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 470 TCAAGGATCTTAATGAAGATCAGAAGTTCGAGTTCGAAGACAAGTATTTCGACGCTGTTT 529 Query 479 TATGTGCTGTCGGTGTACAGTATCTACAACAACCCGAAAAGGTGTTTGCACAAGTGTATA 538 | ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 530 TGTGTTCTGTTGGTGTACAGTATCTACAACAACCCGAAAAGGTGTTTGCAGAAGTGTATA 589 Query 539 GAGTGTTGAAACCGGGAGGTGTGTTGATAGTGAGTTTTAGCAATCGGATGTTTTATGAGA 598 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 590 GAGTGTTGAAACCGGGAGGAGTGTTGATAGTGAGTTTTAGCAACCGGATGTTTTATGAGA 649 Query 599 AAGCAATTAGGGTTTGGCGAGATGGAACCGAATACAGTCGGATCCAATTGGTGGTTCAGT 658 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 650 AAGCAATTAGGGTTTGGCGTGATGGAACCGAATACAGTCGGATCCAATTGGTGGTTCAGT 709 Query 659 ACTTTCAGTCTATTGAAGGGTTTACTCAGCCGGAGATCTTCCGGCAACAGCCTGGAGCTC 718 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 710 ACTTTCAGTCTATTGAAGGGTTTACTCAGCCGGAGATCATCCGGCAACAGCCTGGAGCTC 769 Query 719 AGATATCGGTTATGACTCGGCTTATGGGTTTTATTGGTTTAGCTTCTAGGCCCGATCCTT 778 ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 770 AGATATCGGTTTTGACTCGGCTTATGGGTTTTATCGGTTTAGCTTCTACGCCCGATCCTT 829 Query 779 TTAATGCTGTCATTGCTTATAAGAATTTCAAACCTCTTTATGAGTAA 825 |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 830 TTAATGCTGTCATTGCTTATAAAAATTTCAAACCTATTTATGAGTAA 876 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40187317600 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5