BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg340965
Length=1704
Score E
Sequences producing significant alignments: (Bits) Value
AT3G07780.1 | Symbols: OBE1 | Protein of unknown function (DUF1... 2750 0.0
AT5G48160.1 | Symbols: OBE2 | Protein of unknown function (DUF1... 1026 0.0
> AT3G07780.1 | Symbols: OBE1 | Protein of unknown function (DUF1423)
| chr3:2484469-2487024 FORWARD LENGTH=1933
Length=1933
Score = 2750 bits (1489), Expect = 0.0
Identities = 1633/1704 (96%), Gaps = 3/1704 (0%)
Strand=Plus/Plus
Query 1 ATGGGAACATCATCTGGCTCCAATCTTCCTCACCAGATGCTACCTCCACGTCAGCAACTA 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 ATGGGCACATCATCTGGGTCCAATCTTCCTCACCAGATGCTACCTCCACGTCAGCAACTA 144
Query 61 CAAACATCTCTTTCACTTGTATCTTCGGATCCCCACTTGTCACGATCTAATTCTGGCATT 120
|||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 145 CAAACATCTCTTTCGCTTGTATCTTCAGATCCCCACTTGTCACGGTCTAATTCTGGCATT 204
Query 121 GTTCGTGAATCACCAGCTGAAAGTGCTAGCTCTCAAGAAACTTGGCCAACCTCAAAATCT 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 GTGCGTGAATCACCAGCTGAAAGTGCTAGCTCTCAAGAAACTTGGCCAACCTCAAAATCT 264
Query 181 ATTATGGGAAATAAGACAGAGAGCGGAAAGACAGGGCCTGACTCTCATGATCAACTTGTC 240
|||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 265 ATTATGGGAAGGAAGACAGATAGCGGAAAGACAGGGCCTGACTCTCATGATCAACATGTG 324
Query 241 ATCCGCCATCTTTCCATTGCTGATAAGGTATCACTACGGGACATAGCTAGGGAAAGAGTT 300
||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||| ||
Sbjct 325 ATCCGCCATGTTTCCATTGCTGATAAGGTATCGCTACGGGACATAGCTAGAGAGAGACTT 384
Query 301 GACATAGTCGCTGAGAGAATGCACCGATTACCAGAAGAATATCTCGACGAGTTAAAGAAC 360
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 385 GACATAGTCGCTGAGAGAATGCATCGATTACCAGAAGAATATCTCGAGGAGTTAAAGAAT 444
Query 361 GGCCTTAAGGCTATCCTTGAGGGAAATGGTGCCCAGCCTATAGATGAGTTTATGTTTCTG 420
|| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 445 GGTCTTAAGGCTATCCTTGAAGGAAATGGTGCGCAGCCTATAGATGAGTTTATGTTTCTG 504
Query 421 CAGAAGTTTGTCCAGACCAGATCTGATTTAACTTCAAAGACACTTGTCAGGGCTCACCGA 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 505 CAGAAGTTTGTCCAGACGAGATCTGATTTAACTTCAAAGACACTTGTCAGGGCTCACCGA 564
Query 481 GTGCAGCTTGAAATCCTTGTGGTTATAAACACTGGAATCCAAGCATTCTTGCACCCAAAC 540
|||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 565 GTGCAGCTTGAAGTTCTTGTGGTTATAAACACTGGTATCCAAGCATTCTTGCACCCAAAC 624
Query 541 ATCAATCTCTCTCAGTCATCGCTCATCGAGATCTTTGTGTACAAGAGATGCAGAAACATA 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 625 ATCAATCTCTCTCAGTCATCACTCATCGAGATCTTTGTGTACAAGAGATGCAGAAACATA 684
Query 601 GCGTGCCAAAACGAACTCCCGGCTGATGGTTGTCCCTGTGATATATGCGCTAATAGGAAA 660
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 685 GCTTGCCAAAACGAACTCCCGGCTGATGGTTGTCCCTGTGAGATATGCGCTAATAGGAAA 744
Query 661 GGCTTCTGCAACCTGTGCATGTGTGTGATCTGTAACAAGTTTGACTTTGCGGTCAACACA 720
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 745 GGCTTCTGCAACCTGTGCATGTGTGTGATATGTAACAAGTTTGACTTTGCAGTCAACACA 804
Query 721 TGCCGCTGGATTGGCTGCGATGTGTGTTCTCATTGGACTCATACGGATTGTGCTATTAGG 780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 805 TGCCGCTGGATTGGCTGCGACGTGTGTTCTCATTGGACTCATACGGATTGTGCTATTAGG 864
Query 781 GATGGAGAGATTTCGATGGGAGTTTCTCCCAAGAGCGTATCTGGGATGGGAGAAATGTTG 840
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 865 GATGGGGAGATTTCGATGGGAGTTTCTCCCAAGAGCGTATCTGGGATGGGAGAAATGCTG 924
Query 841 TTCAAGTGTCGAGCCTGCAACCATACTTCTGAATTGCTGGGGTGGGTTAAAGATGTGTTT 900
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 925 TTCAAGTGTCGAGCGTGCAACCATACTTCTGAATTGCTGGGGTGGGTGAAAGATGTGTTT 984
Query 901 CAGCACTGTGCACCAAACTGGGATAGGGAATCTTTGATGAAGGAACTAGACTTCGTGAGT 960
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 985 CAGCACTGTGCACCAAACTGGGATAGGGAATCTTTAATGAAGGAACTTGACTTCGTTAGT 1044
Query 961 AGGATTTTCCGTGGAAGCGAAGATACAAAAGGCCGGAAACTATTCTGGAAGTGTGAGGAA 1020
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 1045 AGGATTTTCCGTGGAAGCGAAGATACAAGAGGCCGGAAACTCTTCTGGAAGTGTGAGGAG 1104
Query 1021 CTTATTGACAAGATTAAAGGTGGAATGGCGGAAGCAACAGCTGCCAAGTTGATACTGATG 1080
||||| || ||||||||||||||| |||| ||||||||||| |||||||||||||| |||
Sbjct 1105 CTTATGGAGAAGATTAAAGGTGGACTGGCTGAAGCAACAGCGGCCAAGTTGATACTCATG 1164
Query 1081 TTTTTCCAAGAAATTGAATTGGACTCTCCAAAGAGCCTTGAAAGCGGAGAAGGTGGGGGA 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165 TTTTTCCAAGAAATTGAATTGGACTCTCCAAAGAGCCTTGAAAGCGGAGAAGGTGGGGGT 1224
Query 1141 ACAATAGCACCTCAAGATGCATGCAACCGAATTGCTGAAGTTGTAAAGGAAACACTGCGG 1200
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1225 ACGATAGCACCTCAAGATGCATGCAACCGAATTGCTGAAGTTGTAAAGGAAACACTGAGG 1284
Query 1201 AAAATGGAGATAGTGGGTGAGGAAAAGACGAGGATGTACAAGAAAGCGCGAATGGGGCTT 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285 AAAATGGAGATAGTGGGTGAGGAAAAGACGAGGATGTACAAGAAAGCGCGAATGGGGCTT 1344
Query 1261 GAGGAATGCGAGAGAGAGGTGGAAGAGAAAGCAAAGCAAGTGGCGGAACTGCAGATGGAG 1320
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1345 GAGGAATGCGAGAGAGAGGTAGAAGAGAAAGCAAAGCAAGTGGCGGAACTGCAGATGGAG 1404
Query 1321 AGGCAGAAGAAGAAACAACAGATAGAAGAGGTGGAGAGGATAGTGAGGCTGAAGCAAGCA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 AGGCAGAAGAAGAAACAACAGATAGAAGAGGTGGAGAGGATAGTGAGGCTGAAGCAAGCA 1464
Query 1381 GAGGCAGAGATGTTTCAGTTAAAAGCAAACGAAGCGAAAGTGGAAGCAGAGAGATTGGAG 1440
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1465 GAGGCAGAGATGTTTCAGTTAAAAGCAAACGAGGCAAAAGTGGAAGCAGAGAGATTGGAA 1524
Query 1441 AGGATTGTGAAAGCGAAGAAGGAAAAAACAGAAGAGGAATACGCGAGTAACTACTTGAAA 1500
||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||
Sbjct 1525 AGGATTGTGAAAGCGAAAAAGGAGAAAACAGAAGAGGAATACGCAAGTAACTATTTGAAA 1584
Query 1501 CTGAGGCTGAGCGAGGCAGAGGCAGAGAAAGAGTATCTGTTTGAAAAGATAAAAGAGCAA 1560
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1585 CTGAGGCTGAGCGAGGCGGAGGCAGAGAAAGAGTATCTGTTTGAAAAGATAAAAGAGCAG 1644
Query 1561 GAAAGTGGTGGAAATGGTGGTGAGGCGTCACAAGCAGTGATGTACTCAAAGATCAGAGAA 1620
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1645 GAAAGTGGTGGGAATGGTGGTGAAGCGTCACAAGCAGTGATGTACTCAAAGATCAGAGAA 1704
Query 1621 ATGCTTCATGGATACAATGCCTCTTCTTCGCCAAGAGTAGATCCAAGATCTAACCAGCGA 1680
||||| |||||||||||||| || || |||||| |||||||||||||| |||||||||
Sbjct 1705 ATGCTGCATGGATACAATGCATCGTC---GCCAAGGGTAGATCCAAGATCAAACCAGCGA 1761
Query 1681 AATCCTTTCAGATCCAATCCTTAG 1704
||||||||||||||||||||||||
Sbjct 1762 AATCCTTTCAGATCCAATCCTTAG 1785
> AT5G48160.1 | Symbols: OBE2 | Protein of unknown function (DUF1423)
| chr5:19527837-19530316 REVERSE LENGTH=2025
Length=2025
Score = 1026 bits (555), Expect = 0.0
Identities = 1298/1643 (79%), Gaps = 106/1643 (6%)
Strand=Plus/Plus
Query 123 TCGTGAATCACCAGCTGAAAGTGCTAGCTCTCAAGAAACTTGGCCAACCTCA--A-A-AT 178
||| || || ||||| || ||||| || ||||||||||| ||||| | || | | | |
Sbjct 238 TCGCGAGTCTCCAGCGGAGAGTGCGAGTTCTCAAGAAACATGGCC-A-CT-AGGAGACA- 293
Query 179 CTATT-ATGGGAAATAAGACAGA-GAG-CGGAAAGACAGGGCCTGACTCTCAT-GATC-A 233
|| || |||| || ||| || | ||| | |||||||| |||||| ||| || || | |
Sbjct 294 CTGTTGCTGGG-AAGAAGTCA-ATGAGTC-AAAAGACAGAGCCTGATTCT-ATGGAACAA 349
Query 234 AC--T---TGTCATCCGCCATCTTTCCATTGCTGATAAGGTATCACTACGGGACATAGCT 288
|| | ||| || | |||| |||| | ||| || |||||||| ||||||| || |||
Sbjct 350 ACTGTGAATGTGATGCACCATGTTTCGAATGCGGACAAGGTATCGGTACGGGATATCGCT 409
Query 289 AGGGAAAGAGTTGACATAGTCGCTGAGAGAATGCACCGATTACCAGAAGAATATCTCGAC 348
|||||||||||||| |||| || ||||||||||| |||||||| || || | ||| |||
Sbjct 410 AGGGAAAGAGTTGAGTTAGTTGCAGAGAGAATGCATCGATTACCGGATGAGTTTCTTGAC 469
Query 349 GAGTTAAAGAACGGCCTTAAGGCTATCCTTG-AGGGAAATGGT-GCCCAGCCTATAGATG 406
|||||||||||||| |||||| ||||||||| |||| ||| || || ||| | | ||||
Sbjct 470 GAGTTAAAGAACGGTCTTAAGTCTATCCTTGAAGGG-AAT-GTAGCGCAGAGTGTTGATG 527
Query 407 AGTTTATGTTTC-TGCAGAAGTTTGTCCAGACCAGATCTGATTT-AACTTC-AAAGACAC 463
|||| ||| ||| |||||||| |||| |||| ||| ||||||| | | || | ||||
Sbjct 528 AGTTCATG-TTCTTGCAGAAGGTTGTTCAGAGTAGAACTGATTTGAGC-TCTGTA-ACAC 584
Query 464 TTGTCAGGGCTCACCGAGTGCAGCTTGAAATCCTTGTGGTTATAAACACTGGAATCCAAG 523
|||| || ||||| || ||||||||||| || ||||| | ||||| || || || || |
Sbjct 585 TTGTTAGAGCTCATCGGGTGCAGCTTGAGATACTTGTAGCGATAAATACCGGGATTCAGG 644
Query 524 CATTCTTGCACCCAAACATCAATCTCTCTCAGTCATCGCTCATCGAGATCTTTGTGTACA 583
| || ||||| || || || | ||| |||||| | || || |||||||| ||||| ||||
Sbjct 645 CGTTTTTGCATCCGAATATTAGTCTGTCTCAGCCGTCTCTTATCGAGATTTTTGTATACA 704
Query 584 AGAGATGCAGAAACATAGCGTGCCAAAA-CGAACTCCCGGCTGATGGTTGTC-CCTGTGA 641
||||||| ||||||||||| |||||||| | |||| || ||||||| ||| | ||||||
Sbjct 705 AGAGATGTAGAAACATAGCTTGCCAAAATC-AACTACCTGCTGATGATTG-CTACTGTGA 762
Query 642 TATATGCGCTAATAGGAAAGGCTTCTGCAACCTGTGCATGTGTGTGATCTGTAACAAGTT 701
|||||| ||||||||||||| || || ||||| || |||||| |||||||||||||||
Sbjct 763 TATATGTACTAATAGGAAAGGGTTTTGTAACCTTTGTATGTGTACGATCTGTAACAAGTT 822
Query 702 TGACTTTGCGGTCAACACATGCCGCTGGATTGGCTGCGA-TGTGTGTTCTCATTGGACTC 760
||| ||| |||| || || ||||||||||| || || || | ||||||| || |||||||
Sbjct 823 TGATTTTTCGGTTAATACTTGCCGCTGGATCGGATGTGACT-TGTGTTCCCACTGGACTC 881
Query 761 ATACGGATTGTGCTATTAGGGATGGAGAGATTTCGA-TGGGAGT-TTCTCCCAAG-AGCG 817
||||||||||||||||| |||||||| |||| | | | ||| | ||| | ||| |
Sbjct 882 ATACGGATTGTGCTATTCGGGATGGACAGATCACCACT-GGA-TCCTCTGCTAAGAATAA 939
Query 818 TA--TCTGGGATGGGAGAAAT-GTTGTTCAAGTGTCGAGCCTGCAACC-ATACTTCTGAA 873
|| || || ||||| || | |||| |||||||| || || |||| | || |||||
Sbjct 940 TACTTCAGGTCCAGGAGAGATAG-TGTTTAAGTGTCGGGCTTGTAACCGA-ACGTCTGAG 997
Query 874 TTGCTGGGGTGGGTTAAAGATGTGTTTCAGCACTGTGCACCAAACTGGGATAGGGAATCT 933
|| |||| |||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct 998 CTGTTGGGATGGGTTAAAGATGTGTTTCAGCACTGTGCACCGAACTGGGATCGAGAATCT 1057
Query 934 TTGATGAAGGAACTAGACTTCGTGAGTAGGATTTTCCGTGGAAGCGAAGATACAAA-AGG 992
|||||||||||||| || || || |||||||||||||| |||||||||||| ||| |||
Sbjct 1058 TTGATGAAGGAACTTGATTTTGTTAGTAGGATTTTCCGCGGAAGCGAAGAT-CAACGAGG 1116
Query 993 CCGGAAACTATTCTGGAAGTGTGAGGAACTTATTGACAAGATTAAAGGTGGAATGGCGGA 1052
||||||| || |||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct 1117 TAGGAAACTGTTTTGGAAGTGTGAGGAGCTTATTGACAAGATTAAAGGTGGTTTGGCTGA 1176
Query 1053 AGCAACAGCTGCCAAGTTGATACTGATGTTTTTCCAAGAAATTGAATTGGACTCTCCAAA 1112
|||||| |||||||| |||||| | |||||||||||||| || |||| |||||| | ||
Sbjct 1177 AGCAACTGCTGCCAAATTGATATTAATGTTTTTCCAAGAGATCGAATCAGACTCTGCGAA 1236
Query 1113 GAGCCTTGAAAGCGGAGAAGGTGGGGGAACAATAGCACCTCAAGATGCATGCAACCGAAT 1172
|||| |||||| ||||||||||| | || |||||||| |||||||||||||||||
Sbjct 1237 GAGCTTTGAAAATGGAGAAGGTGGACGTTTGATGGCACCTCAGGATGCATGCAACCGAAT 1296
Query 1173 TGCTGAAGTTGTA-AAGGAAACACTGCGGAAAATGGAGATAGTGGGTGAGGAAAAGACGA 1231
||||||||||||| ||| | || || |||||||||||||||||| |||||| |||| ||
Sbjct 1297 TGCTGAAGTTGTACAAG-AGACTTTGAGGAAAATGGAGATAGTGGCTGAGGAGAAGATGA 1355
Query 1232 GGATGTACAAGAAAGCGCGAATGGGGCTTGAGGA-ATGCGAGAGAGAGGTGGAAGAGAAA 1290
| |||| |||||| || || |||| |||||| | |||||| |||||| | ||||| |||
Sbjct 1356 GAATGTTCAAGAAGGCACGCATGGCTCTTGAG-ACATGCGATAGAGAGCTCGAAGACAAA 1414
Query 1291 GCAAAGCAAGTGGCGGAACTGCA-G-ATGGAGAGGCAGAAGAAGAAACAACAGATAGAAG 1348
|| ||| |||| | |||||| | | | | |||||||||||||||||| |||||||| |
Sbjct 1415 GCCAAGGAAGTTTCAGAACTGAAAGCA-G-AGAGGCAGAAGAAGAAACTTCAGATAGATG 1472
Query 1349 AGGTGGAGAGGATAGTGAGGCTGAAGCAAGCAGAGGCAGAGATGTTTCAG-TTAAAAGCA 1407
|| | ||||| || ||||||||||||||||| |||||||| ||||| ||| ||||| |||
Sbjct 1473 AGCTAGAGAGAATCGTGAGGCTGAAGCAAGCGGAGGCAGACATGTTCCAGCTTAAA-GCA 1531
Query 1408 AACGAAGCGAAAGTGGAAG-CAGAGAGATTGGAGAGGATTGTGAA-AGCGAAGAA-GGAA 1464
|| ||||| |||| || || | || || ||| |||||||||| | |||||| || |||
Sbjct 1532 AATGAAGC-AAAGCGGGAGGCTGATAGGTTGCAGAGGATTGT-ACTAGCGAA-AATGGAT 1588
Query 1465 AAAACAGAAGAGGAATACGCGAGTAACTA-CTTGAAACTGAGGCTGAGCGAGGCAGAGGC 1523
|| | || ||||||||||| |||||||| || ||||| ||||||||| ||||| |||||
Sbjct 1589 AAGTCTGAGGAGGAATACGCAAGTAACTATCT-GAAACAGAGGCTGAGTGAGGCCGAGGC 1647
Query 1524 AGAGAAAG-AGTATCTGTTTGAAAAGATAAAAGA-GCAAGAAAG-T---GG-TGG-A--A 1573
|||||| | ||||||||||||| ||||| || | ||| |||| | || ||| | |
Sbjct 1648 AGAGAA-GCAGTATCTGTTTGAGAAGATTAA-GCTGCAGGAAAACTCAAGGGTGGCATCA 1705
Query 1574 -AT-G--GTGGTG----AGG---C--GTCACAAGC-AGTGATGTACTCAAAGATCAGAGA 1619
| | |||||| ||| | |||||| | | ||||||||||||||||| | ||
Sbjct 1706 CAAAGCAGTGGTGGGGGAGGAGACCCGTCACAGGTGA-TGATGTACTCAAAGATCCGCGA 1764
Query 1620 AATGCTTCATGGATACAATGCCTCTTCTTCGCCAAGAGTAGATCCA-AGATCTAACC-AG 1677
||||||| ||||||||| | ||| || | ||||| || ||||| | || ||| | ||
Sbjct 1765 TCTGCTTCAAGGATACAAT-C-TCT-CT-C-CCAAG-GTTGATCCTCA-AT-TAAACGAG 1816
Query 1678 CGAAATCCTTTCAGATCCAATCC 1700
|| ||||||||||||||||||||
Sbjct 1817 CGTAATCCTTTCAGATCCAATCC 1839
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84236514510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5