BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg341076
Length=3738
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09370.2 | Symbols: MYB3R-3 | myb domain protein 3r-3 | chr3... 2276 0.0
AT3G09360.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein ... 1657 0.0
AT2G45100.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein ... 918 0.0
AT5G02320.1 | Symbols: ATMYB3R5, MYB3R-5 | myb domain protein 3... 621 1e-176
AT2G01280.1 | Symbols: MEE65 | Cyclin/Brf1-like TBP-binding pro... 544 3e-153
AT3G09385.1 | Symbols: | pseudogene, hypothetical protein | ch... 257 5e-67
AT4G21605.1 | Symbols: | pseudogene, hypothetical protein | ch... 134 8e-30
> AT3G09370.2 | Symbols: MYB3R-3 | myb domain protein 3r-3 | chr3:2879366-2882267
FORWARD LENGTH=1840
Length=1840
Score = 2276 bits (1232), Expect = 0.0
Identities = 1421/1508 (94%), Gaps = 29/1508 (2%)
Strand=Plus/Plus
Query 1851 GATGGATCTTCAGGAAGAAGCAGGTGAAGTGAAAATTGAGGATCAGTGTGTAGAAAACAA 1910
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 213 GATGGATCTTCAGGAAGAAACAGGTGAAGTGAAAATTGAGGATCAGTGTGTAGAAAATAA 272
Query 1911 GCAATCAACACCTGCTTCGTGCTCTTCTGTATCTGAAGGTAGTGCTGGTAGTTCTCACAA 1970
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 273 GCAATCAACACCTGCTTCGTGCTCTTCTGTATCTGAAGGCAGTGCTGGTAGTTCCCACAA 332
Query 1971 GTCACCTACAATTGCAAGTCCTCCTGCCACAGTTTCACCAACTCATAGATACCTCGGGAG 2030
|||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||
Sbjct 333 GTCACCTACAATTGCAAG---TCCTGCCACAGTATCACCTACTCATAGGTACCTCGGGAG 389
Query 2031 GACGAGTGGCCCTATAAGGCGAGCGAAAGGTGGATGGACTCCGGCAGAGGATGAGACATT 2090
|||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct 390 GACGAGTGGCCCTATAAGGCGAGCCAAAGGTGGGTGGACTCCGGAAGAGGATGAGACATT 449
Query 2091 GAGACGAGCAGTTGGCACGTATAAAGGGAAGAGCTGGAAGAATATAGCGAAATTTTTCCC 2150
||||| |||||||| ||||| |||||| |||||||||||||| |||||||||| ||||||
Sbjct 450 GAGACAAGCAGTTGACACGTTTAAAGGCAAGAGCTGGAAGAACATAGCGAAATCTTTCCC 509
Query 2151 TGATAGAACTGAAGTTCAATGCCTGCACCGGTGGCAGAAAGTTCTAAATCCAGACCTTAT 2210
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 510 TGATAGAACTGAAGTTCAATGCCTGCATCGGTGGCAGAAAGTTCTAAATCCAGACCTTAT 569
Query 2211 TAAGGGACCTTGGACACAAGAGGAGGATGAGAAAATCGTTGAACTCGTTGAAAAATACGG 2270
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 570 TAAGGGACCTTGGACACATGAGGAGGATGAGAAAATCGTTGAACTGGTTGAAAAATACGG 629
Query 2271 GCCTGCGAAATGGTCTGTTATCGCACAGTCTTTACCAGGTCGAATTGGGAAGCAATGTCG 2330
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 630 GCCTGCGAAATGGTCTATTATCGCACAGTCTTTACCAGGTCGAATTGGGAAGCAATGCCG 689
Query 2331 AGAAAGGTGGCACAACCATTTGAATCCTGATATTAACAAGGATGCTTGGACCTCAGAGGA 2390
||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 690 AGAGAGGTGGCATAACCATTTGAATCCTGATATTAACAAGGATGCTTGGACCACAGAGGA 749
Query 2391 AGAAGTAGCTCTCATGAATGCTCATCGAAGCCACGGAAACAAATGGGCTGAAATTGCTAA 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 AGAAGTAGCTCTCATGAATGCTCATCGAAGCCACGGAAACAAATGGGCTGAAATTGCTAA 809
Query 2451 GGTCTTACCTGGCAGGACTGATAATGCAATAAAGAACCATTGGAATAGTTCACTGAAAAA 2510
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 810 GGTCTTACCCGGCAGGACTGATAATGCAATAAAGAACCATTGGAATAGTTCATTGAAAAA 869
Query 2511 GAAGTCAGAATTCTACTCAATGACTGGTAGGTTACCACCACCAACAACAGCAAAGAACGG 2570
||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||| ||
Sbjct 870 GAAGTCAGAATTCTACTTATTGACTGGTAGGTTACCACCACCAACAACAACAAGGAATGG 929
Query 2571 TGTTCCTGATAGTGTAACTAAACGTTCATCGTCCT-CTCAGAAAAGGGTTTTTGGTTCAG 2629
|||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct 930 TGTTCCTGATAGTGTAACCAAACGTTCATCGT-CTGCTCAGAAAAGGGTTTTTGGTTCAG 988
Query 2630 TTACTCAAACCTCATCAGGAACTACAGA-GAAAAACAATCCCGATGAAGACAGAAATGGC 2688
|| ||||||||||||||| ||||||||| | |||||||| || ||||||| ||||||||
Sbjct 989 TTGCTCAAACCTCATCAGTAACTACAGATG-TAAACAATCTCGCTGAAGACGGAAATGGC 1047
Query 2689 CAAATAAACTCTA-CTGTTCCGGTCGAAGAAGTAGTAGCTGCTTCACGAATGACTGGTGT 2747
||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct 1048 CAAATAAACTC-ATCTGTTCCTGTCGAAGAAGTAGTAGCTGCTTCACGAATGACTAGTCT 1106
Query 2748 TAATGAGTATGCTCGTTCTCCTCAGTTGCCTAACCCAGAGCCATTGCCAGAGAATGGTGG 2807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 TAATGAGTATGCTCGTTCTCCTCAGTTGCCTAACCCAGAGCCATTGCCAGAGAATGGTGG 1166
Query 2808 AGCTGCAAATAATGGTTATCATCTGTACTACACGCCTCAAATAGAGTATTACATGGCGTC 2867
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1167 AGCTGCAAATAATGGTTATCATCTGTACTACACGCCTCAAATAGACTATTACAGGGCGTC 1226
Query 2868 AGAAGTGGATACGCAGCGTATGAATGGGTATGAATGTGGTTGCAGTCCAAGCGCATCACC 2927
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1227 AGAAGTGGATACGCAGCGTATGTATGGGAATGAATGTGGTTGCAGTCCAAGCGCATCACC 1286
Query 2928 AGTTAGCTTCTTCACTCCACCGCCATGTAGAAATGCGTACAGTAACGGTTCAACTCCAAG 2987
|||||||||||||||||||||||| ||||| |||| | ||||||||||||| ||||||||
Sbjct 1287 AGTTAGCTTCTTCACTCCACCGCCGTGTAGGAATGTGCACAGTAACGGTTCGACTCCAAG 1346
Query 2988 AAGTCCTGAATCTTACCTGAGAGAAGCTGCTAGAACTTACCCAAACACACCATCCATTTT 3047
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1347 AAGTCCTGAATCTTACCTGAGAGAAGCTGGTAGAACTTACCCAAACACACCATCCATATT 1406
Query 3048 CAGGAAAAGACGACCCAGGGTTGTTGTTGAGGATAACAACAATGCCGAGAAAACAGATGA 3107
|||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||
Sbjct 1407 CAGGAAAAGACGACCCAGGGTTGTTGTTCAGGATAACAACAACGCCAAGAAAACAGATGA 1466
Query 3108 AGCTAAAGAGGTTGATCAAAAGGTGAATGATGGTAAGGATAGTTCAGAAAGCCCTAACTG 3167
|||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 1467 AGCTAAAGAGGTTGATCAAAAGGTGAATGATGGTAAGGATAGTTCAGA--G----A--T- 1517
Query 3168 TGAAGAGATTCAAAAGAATGGATCAAATGCTTACAATCTATCTCCTCCGTATCGGATAAG 3227
| || | || || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1518 TCAA-A-AT--AA-----TGGATCAAATGCTTACAATCTATCTCCTCCATATCGGATAAG 1568
Query 3228 ATCGAAAAGAACAGCAGTTTTCAAATCAAGACAGCTTGAGTTTATATCT-GCAGAGGAAG 3286
||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1569 ATCGAAAAGGACAGCAGTTTTCAAATCAAGACAGCTTGAGTTTATATCTAG-AGAGGAAG 1627
Query 3287 AGAAAGCTGATGATGAAACCAAATCATCTGAGAAAGATATGTTGATTGATGGAGATTCTC 3346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 AGAAAGCTGATGATGAAACCAAATCATCTGAGAAAGATATGTTGATTGATGGAGATTCTC 1687
Query 3347 AACTCCTA 3354
||||||||
Sbjct 1688 AACTCCTA 1695
> AT3G09360.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein
| chr3:2873449-2878591 FORWARD LENGTH=2188
Length=2188
Score = 1657 bits (897), Expect = 0.0
Identities = 1024/1087 (94%), Gaps = 2/1087 (0%)
Strand=Plus/Plus
Query 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 274
Query 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct 275 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTACCGAAGTTACA 334
Query 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGAGCAGTGTTCAA 180
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 335 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCAA 394
Query 181 AGTGGGATTCCAAGCTCACGTGAAAGGAGATATAGAATAGCTAGAGATGAGTTTACGAAT 240
||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 395 AGTGGGATTACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTTATGAAT 454
Query 241 TTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTTCTA 300
|||| |||||||||||| |||||||||||||||| ||||||||||| ||| || | | |
Sbjct 455 TTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTAAA 514
Query 301 TTCTTT-AAATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAGAACTGAACTAGTACA 359
|||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 515 TTCTTTGAAAT-GGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAACTGAACTAGTACA 573
Query 360 GGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTCCGTTTCTTCTTATTGATTT 419
||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||
Sbjct 574 GGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACATTGCGTTGCTTCTTATTGATTT 633
Query 420 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGA 479
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 634 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTCTGTGA 693
Query 480 AATGCTGTACATTGCGGATAATCAAAATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT 539
|||||||||| ||| ||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct 694 AATGCTGTACCTTGTGGAAAATCGGAATTATGAAAAGCTTGTTGATCCTTCAATTTTCAT 753
Query 540 CGATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCTGTTGTGAAAACAGC 599
|||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||
Sbjct 754 GGATCGATTCTCAAACAGCTTATTGAAAGGAAAAAATAATAAAGATGTTGTGGCAACAGC 813
Query 600 TATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 659
|| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 814 TAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 873
Query 660 AATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTAAGTC 719
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 874 AATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCATGGTATCAAGTGCTCTAAGAC 933
Query 720 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATTGAGTT 779
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 934 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTCACCAAACGATTGATTGAGTT 993
Query 780 TGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCACAGAAAGAGAATCTCATAA 839
||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| |||||
Sbjct 994 TGGCGATACGGATTCTGGAAATTTAAATGTTAATGAGCTCAGAGAAAGAGAATCGCATAA 1053
Query 840 AAGATCTTCTACCATGAAACCAACCTCAAACAAAGAGGCGGTGCTCTGTATGCATCAGGA 899
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1054 AAGATCTTTTACCATGAAACCAACCTCAAATAAAGAGGCGGTGCTCTGTATGCATCAGGA 1113
Query 900 TAGTAAACCTTTTGGTTATGGACTATGTAAAGACTGCTACGAAGATTTCATAAATGTTTC 959
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1114 TAGTAAACCTTTTGGTTATGGACTATGTGAAGACTGCTACAAAGATTTCATAAATGTTTC 1173
Query 960 TGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTTTCCAGCGCGCAGAGAATGAGCGAAT 1019
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 1174 TGGTGGACTTGTTGGTGGGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAAT 1233
Query 1020 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1293
Query 1080 ACTATAT 1086
|||||||
Sbjct 1294 ACTATAT 1300
Score = 732 bits (396), Expect = 0.0
Identities = 432/449 (96%), Gaps = 3/449 (1%)
Strand=Plus/Plus
Query 1219 GAGAAAGGTGAAAGAA-ATAAAGATGGGGATGAAGAACATGCTGATACTTCGGATGAATC 1277
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1343 GAGAAAGGTGAAA-AAGATAAAGATGGGGCTGAAGAACATGCTGATACTTCGGATGAATC 1401
Query 1278 TGACAACTTTTCTGACATCAGTGATGATGAGGTAGATGGCTATATCAACAACGAGGAGGA 1337
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1402 AGACAACTTTTCTGACATCAGTGATGATGAGGTAAATGGCTATATCAACAACGAGGAGGA 1461
Query 1338 AACGCACTATAAGACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGC 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1462 AACGCACTATAAGACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGC 1521
Query 1398 CGCTAAGGAAGCAGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTG 1457
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 TGCTAAGGAAGCAGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTG 1581
Query 1458 CCCAGAAGATGCAAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAA 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1582 CCCAGAAGATGCAAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAA 1641
Query 1518 GGAAAAGCAACaaaaaaaaGCTGAGGAAGCAAAGAACGCGGCTCCCCCAGCCACAGCAAT 1577
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1642 GGAAAAGCAACAAAAAAAAGCTGAGGAAGCAAAGAACGCGGCTCCTCCAGCCACAGCAGT 1701
Query 1578 GGAAGCGGTTCGCCGAACGCTTGAGAAAAAGAGACTAAGTTTGGTGATCAATTACGATGT 1637
||| ||||| |||||||||||||| ||||||||||| |||| ||||||||| ||||||||
Sbjct 1702 GGAGGCGGTACGCCGAACGCTTGATAAAAAGAGACTTAGTTCGGTGATCAACTACGATGT 1761
Query 1638 TTTGGAGGAGCTATTTGATACATCCAGCA 1666
||||||| |||||||||||||||| |||
Sbjct 1762 TTTGGAGTCGCTATTTGATACATCC-GCA 1789
> AT2G45100.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein
| chr2:18595348-18598438 REVERSE LENGTH=1820
Length=1820
Score = 918 bits (497), Expect = 0.0
Identities = 896/1082 (83%), Gaps = 54/1082 (5%)
Strand=Plus/Plus
Query 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
|||||||||||||| || || | |||||| ||||||||||||||||| ||||||| ||||
Sbjct 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGCTGCA 206
Query 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
||| ||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct 207 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTACA 266
Query 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGA-GCAGTGTTCA 179
|||||||||||||||||||||||||||||||| || ||||||||| | | | ||||||||
Sbjct 267 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAG-AGTGTTCA 325
Query 180 AAGTGGGAT-TCCAAGCTCACGTGAAAGGAGATAT-AGAATAGCTAGAGATGAGTTTACG 237
||||| || || ||||||||||||||||| | || |||| ||||| |||||| ||| |
Sbjct 326 GAGTGGCATGTC-AAGCTCACGTGAAAGGATA-ATCAGAAAAGCTACTGATGAGCTTATG 383
Query 238 AATTTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTT 297
|||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||||| |
Sbjct 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-T- 441
Query 298 CTA-TT-CTTTA-AATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAG-AACTGAACT 353
||| || ||||| ||| | || |||| || ||||||||||||||||| || || |||||
Sbjct 442 CTAATTTCTTTAGAATTG-CACTTGATCATAATTTCACTAAAGGCCGTAGCAAA-GAACT 499
Query 354 AGTACAGGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTC-CGTTTCTTCTTA 412
|||| |||| ||||||||||||||||||||| |||| || || || |||||||||
Sbjct 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCAGGCAATTCAAA-TTGGCGGTTCTTCTTA 558
Query 413 TTGATTTCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAAC 472
||||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
Query 473 TCTGTGAAATGCTGTACATTGCGGATAATCAAAATTATGA-AAAGCTTGTTGACCCTTCA 531
||||||| ||||| |||||| | || || || || ||||| ||| |||||||| ||||||
Sbjct 619 TCTGTGACATGCTCTACATTACAGAAAACCACAACTATGAGAAA-CTTGTTGATCCTTCA 677
Query 532 ATTTTCAT-CGATCGATTCTCAAACATCTTATTGAAAGGA--ACACA-TAATAAAGCTGT 587
|||||||| | ||||||||||||||| ||||||||||| ||||| ||||||| ||
Sbjct 678 ATTTTCATTCC-TCGATTCTCAAACATGTTATTGAAAGGTGCACACAATAATAAA-CTC- 734
Query 588 TGTGAAAACAGCTATAGC-CATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCC 646
||| ||| |||| | | ||||||||||||||||||| |||||||||| |||||||| |
Sbjct 735 -GTGCTAACGGCTACA-CACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 792
Query 647 GGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCA 706
|||| || ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 793 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 852
Query 707 AGTGCTCTAAGTCAGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAAC 766
||||||| ||| ||||||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 853 AGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAA 912
Query 767 GATTGATTGAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCAC-A--- 822
||||||||||||||||| |||| ||| ||| || ||| | || |||||| ||| |
Sbjct 913 GATTGATTGAGTTTGGAGATACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAA 972
Query 823 --GAAAGAGAATCTCATAAAAGA-T-C-TT-C----TACCATGAAACCAACCTCAAACAA 872
||||||||| | ||| | | | || | || | ||| |||| | ||||
Sbjct 973 CTGAAAGAGAAAA--AGAAACGGCTGCATTGCGAAGTAAAAGGAAGCCAAATTTTTACAA 1030
Query 873 AGA-GGCG--GTGCTCTGTATGCATCAGGATAGTAAACCTTTTGGTTATGGACTATGTAA 929
||| || | ||||||||||||||||| ||| |||||||| ||| ||||||| ||||| |
Sbjct 1031 AGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTGA 1090
Query 930 -AGACTGCTACGAAGATTTCATAA-ATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCT 987
|| ||| ||||| || ||||| | | |||||||||||||||| |||||||| || |||
Sbjct 1091 GAG-CTGTTACGATGAATTCATGACA-GTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1148
Query 988 CCTGCTTTCCAGCGCGCAGAGAATGAGCGAATGGA--AAAA-GCAGCTAGAGAAGAAAAC 1044
|| || |||||||| |||||||| ||| ||||||| |||| || |||| |||||||||
Sbjct 1149 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAAC 1208
Query 1045 GA 1046
||
Sbjct 1209 GA 1210
> AT5G02320.1 | Symbols: ATMYB3R5, MYB3R-5 | myb domain protein
3r-5 | chr5:483123-486434 REVERSE LENGTH=2056
Length=2056
Score = 621 bits (336), Expect = 1e-176
Identities = 581/695 (84%), Gaps = 34/695 (5%)
Strand=Plus/Plus
Query 1874 GTGAAGTGAAAATTGAGGA-TCAGTGTGTAGAAAACAAGCAATCAACACCTGCTTCGTGC 1932
||||| |||||||||| || ||| ||| | || || |||||| || | ||||||| |||
Sbjct 140 GTGAAATGAAAATTGA-GATTCAATGTATGGAGAATAAGCAACCATTAGCTGCTTCTTGC 198
Query 1933 TCTTCTGTATCTGAAGGTAGT-GCTGGTAGTTCTCACAAGTCACCT-ACAATTGCAAGTC 1990
||||||| ||| ||||||||| |||| | ||| | |||||||||| | ||| ||||
Sbjct 199 TCTTCTGCATCCGAAGGTAGTGGCTGTTTCTTC-CTCAAGTCACCTGA-AATCGCAA--- 253
Query 1991 CTCCTGCCACAGTTTCACCAACTCATAGATACCTCGGGAGGACGAGTGGCCCTATAAGGC 2050
|||||||||||| | | | |||| | |||| ||||||| ||||| ||||| || |
Sbjct 254 CTCCTGCCACAG--T-ATC--TTCAT---TTCCTC-GGAGGACTAGTGGACCTATGAGAC 304
Query 2051 GAGCGAAAGGTGGATGGACTCCGGCA-GAGGATGAGACA-TTGAGACGAGCAGTTGGCAC 2108
|||| |||||||| |||||||| | | |||||||||||| || ||||||||||||| |
Sbjct 305 GAGCAAAAGGTGGTTGGACTCCAG-AGGAGGATGAGACACTT-AGACGAGCAGTTGAAAA 362
Query 2109 GTATAAAGGGAAGAGCTGGAAGAATATAGCGAAATTTTTCCCTGATAGAACTGAAGTTCA 2168
|||||| |||||||| |||||||| |||||| |||||||||| || ||||| ||||| ||
Sbjct 363 GTATAAGGGGAAGAGGTGGAAGAAAATAGCGGAATTTTTCCCAGAGAGAACAGAAGTCCA 422
Query 2169 ATGCCTGCACCGGTGGCAGAAAGTTCTAAATCCAGACCTTATTAAGGGACCTTGGACACA 2228
|||| ||||| |||||||||||||||| |||||||| ||| |||| ||||||||||| ||
Sbjct 423 ATGCTTGCACAGGTGGCAGAAAGTTCTTAATCCAGAGCTTGTTAAAGGACCTTGGACTCA 482
Query 2229 AGAGGAGGATGAGAAAATCGTTGAACTCGTTGAAAAATACGGGCCTGCGAAATGGTCTGT 2288
|||||||||||| |||||||||||||| || ||||||| || ||||| |||||||||||
Sbjct 483 AGAGGAGGATGATAAAATCGTTGAACTTGTAAAAAAATATGGACCTGCCAAATGGTCTGT 542
Query 2289 TATCG-CACAGTCTTTACCAGGTCGAATTGGGAAGCAATGTCGAGAAAGGTGGCACAACC 2347
|||| || |||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 543 CATCGCCA-AGTCCTTACCAGGTCGTATTGGGAAACAATGTCGAGAAAGGTGGCACAACC 601
Query 2348 ATTTGAATCCTGATATTA-ACAAGGATGCTTGGACC-TCAGAGGAAGAAGT-AGCTCTCA 2404
|||| ||||||| ||||| | ||||||||||||||| | ||| |||||| | ||||||||
Sbjct 602 ATTTAAATCCTGGTATTAGA-AAGGATGCTTGGACCGT-AGAAGAAGAA-TCAGCTCTCA 658
Query 2405 TGAATGCTCATCGAA-GCCACGGAAACAAATGGGCTGAAATTGCTAAGGTCTTACCTGGC 2463
||||| ||||||||| | |||||||||||||||| |||||||||||||| ||||| ||
Sbjct 659 TGAATTCTCATCGAATGT-ACGGAAACAAATGGGCGGAAATTGCTAAGGTTTTACCAGGA 717
Query 2464 AGGACTGATAATGCAATAAAGAACCATTGGAATAGTTCACTGAA-AAAGAAGTCAGAATT 2522
||||||||||| || ||||||||||||||||||||||||||||| ||| || | ||| ||
Sbjct 718 AGGACTGATAACGCCATAAAGAACCATTGGAATAGTTCACTGAAGAAAAAATT-AGAGTT 776
Query 2523 CTACTCAATGACTGGTAGGTTACCACCACCAACAA 2557
||||| | ||||||| || ||||| ||| |||
Sbjct 777 CTACTTAGCAACTGGTAACTTGCCACCGCCAGCAA 811
> AT2G01280.1 | Symbols: MEE65 | Cyclin/Brf1-like TBP-binding protein
| chr2:145676-149394 FORWARD LENGTH=2257
Length=2257
Score = 544 bits (294), Expect = 3e-153
Identities = 560/683 (82%), Gaps = 40/683 (6%)
Strand=Plus/Plus
Query 424 AGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGAAATG 483
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 370 AGCTACCTTCGAGTTAGCGTTTACGAGTTAGGTTCCGTGTACTTGCAACTCTGTGAAATG 429
Query 484 CTGTACATTGCGGATAATCAA-AATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT-CG 541
|||||| ||| | | || ||| || ||||| |||||||||| |||||||| ||||| |
Sbjct 430 CTGTACCTTGTGCAAAA-CAAGAACTATGAGGAGCTTGTTGATCCTTCAATCTTCATTCC 488
Query 542 ATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCT---GTTGT-GAAAACA 597
||||||| |||||| |||||||||||| |||| |||||| | ||| | |||||
Sbjct 489 -TCGATTCACAAACAGCTTATTGAAAGGTGCACACGCTAAAGCAAAAGATGTCGCAAACA 547
Query 598 -G-CTATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTA 655
| ||| | ||||||| ||||||||||| |||||||||||||||| |||||||| || |
Sbjct 548 CGGCTAAAAACATTATATCTAGTATGAAGAGAGATTGGATACAGACAGGCCGGAAACCAA 607
Query 656 GTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTA 715
|||||||||||||||||||| |||||| ||||| |||||||||||||||| || |||||
Sbjct 608 GTGGAATATGTGGAGCAGCAATTTACATGGCTGCACTTTCTCATGGTATCATGTACTCTA 667
Query 716 AGTCAGATATTGTAAACA-TTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATT 774
| |||| |||| ||| | |||||||||| ||||||||||| |||||||| |||||| |
Sbjct 668 GGGCAGACATTGCAAA-AGTTGTGCATATGTGTGAAGCAACAATAACCAAAAGATTGAAT 726
Query 775 GAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAG----ATCACAGA-AAGAG 829
|| |||| ||||| ||| |||||| ||||| |||||||||| || | || |||||
Sbjct 727 GAATTTGCTAATACCGAGGCTGGAAGTTTAACTGTTGATGAGCTTGATGAAAGCGAAGAG 786
Query 830 A-ATCT-CATAAA-AGATCTTCTACCATGAA-ACCAACCTCAAACAAAG-AGGCGGTGCT 884
| || | | |||| | | ||| |||| || ||||| || |||||| || | ||
Sbjct 787 ATAT-TGCGTAAAGAAA-CTTTTACCCC-AAGACCAAATTCTGACAAAGGAGTAG-TGAA 842
Query 885 CTGTATGCATCAGGATAGTAAA-C-CTTTTGGTTATGGACTATGTAA-AGACTG-CTACG 940
||||| ||| ||||| |||| | |||| ||||||||| ||||||| || ||| | |||
Sbjct 843 CTGTAAACATAAGGATT-TAAAACGCTTT-GGTTATGGATTATGTAAGAG-CTGTC-ACG 898
Query 941 AAGATTTCAT-A-AATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTT-TCC 997
| |||||||| | ||| || |||||||| ||||||||||||| || |||||||||| ||
Sbjct 899 ACGATTTCATTATAAT-TT-CTGGTGGAGTTGTTGGTGGGTCGGATCCTCCTGCTTATC- 955
Query 998 AGCGCGCAGAGAATGAGCGAATGGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTA 1057
|||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 956 AGCGAGCAGAGAAAGAGAGAATGGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTG 1015
Query 1058 GTAGCCTAAACCACGATGAACAA 1080
||| | |||||||||||||||||
Sbjct 1016 GTAACTTAAACCACGATGAACAA 1038
> AT3G09385.1 | Symbols: | pseudogene, hypothetical protein |
chr3:2886535-2887714 FORWARD LENGTH=1180
Length=1180
Score = 257 bits (139), Expect = 5e-67
Identities = 296/367 (81%), Gaps = 29/367 (8%)
Strand=Plus/Plus
Query 3355 ATCCCTAGCGAGGAGATATATGGAGGCTCAGAGTACAAAATCGTAGAGTATG-AGAGAAC 3413
||||||||||||||||||| |||||||||| |||||| || ||||||||||| || ||||
Sbjct 642 ATCCCTAGCGAGGAGATATTTGGAGGCTCAAAGTACAGAAGCGTAGAGTATGAAG-GAAC 700
Query 3414 TGTCTATGTGAGGTTTGAGGCGAAGAATGTGACTTACAAGCTGCATAAAGGTAGATGGCG 3473
||||||||| | || |||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 701 TGTCTATGTAAAGTCTGAGGCAAAGGATGTGACTTACAAGCTGCATAAAGGTAGATGGCG 760
Query 3474 AA-AGGCAGACTTGGCGATAA-TGAATCATGGATTGAA-TC-TTCCTTATCT-ATATCAT 3528
|| || ||||| | ||||||| | || ||| | || || ||| ||||| || | ||
Sbjct 761 AACAG-CAGACATAGCGATAAATAAAGGGTGG-T-GATGTCCTTCATTATCCCAT-T-AT 815
Query 3529 TTTGTGATAGAGAATGTTTTCTACCGTTATAATAAAAGGAGGATCGATTGGTATGACTCC 3588
| |||||||||||| || ||||||||||||| | | || || ||||| ||||||||||||
Sbjct 816 TGTGTGATAGAGAACGTGTTCTACCGTTATACTGATAGAAGAATCGAATGGTATGACTCC 875
Query 3589 -AAAGAAAGATCATGGAAAACTTTGAAGGGTTTGGAAAGATTACCTAGCACTTTATCACG 3647
||| |||||| ||||| ||||||||| ||| |||||| ||| | ||| ||| |
Sbjct 876 GAAA-AAAGATTATGGACAACTTTGAAAGGTGTGGAAAAATTGCGTAG---TTT-T---- 926
Query 3648 TTCTAATCGTCTTAAA-TTGGCGA-TTATGGTGGAAAAATGGTACTTTTGTGGGAAGAGT 3705
| || ||| | ||| |||| || ||||||||| ||||||| | || ||| || |||||
Sbjct 927 T-CT---CGTGT-AAACTTGGTGAATTATGGTGGGAAAATGGCAGTTGTGTCGGTAGAGT 981
Query 3706 ATGTGTT 3712
|||||||
Sbjct 982 ATGTGTT 988
> AT4G21605.1 | Symbols: | pseudogene, hypothetical protein |
chr4:11487646-11488821 FORWARD LENGTH=1176
Length=1176
Score = 134 bits (72), Expect = 8e-30
Identities = 233/305 (76%), Gaps = 33/305 (11%)
Strand=Plus/Plus
Query 3398 TAGAGTATG-AGAGAACTGTCTATGTGAGGTTTG-AGGCGAAGAATGTGACTTACAAGCT 3455
||| ||||| || ||||||||||||| ||| | | | | |||||||||||||||||
Sbjct 709 TAGTGTATGAAG-GAACTGTCTATGTAAGG-TCGTATTTTCATAATGTGACTTACAAGCT 766
Query 3456 GCATAAAGGTAGATGGCGAAAGGCAGACTTGGCGATAATGAATCATGGATTGAATCTTCC 3515
|||||||||||||||| | ||||||||| ||||| |||| |||||| | | | |
Sbjct 767 GCATAAAGGTAGATGGATAGCGGCAGACTTAGCGAT---GAATAATGGATGGCGT-TGC- 821
Query 3516 TTATCTATATCATTT-TGTGATAGAGAATGTTTTCTACCGTTATAATAAAAG-G--A--G 3569
| ||| || | ||| ||||||| |||| || |||||| ||| |||| ||| | | |
Sbjct 822 TCATC-ATTTT-TTTGTGTGATAAAGAACGTGTTCTACTGTTGCAATAGAAGTGGTAACG 879
Query 3570 G-AT---CGATTGGTATGACTCCAAAGAAAG-ATCATGGAAAACTTTGAAGGGTTTGGAA 3624
| || ||||||||||||||| || |||| |||||||| |||| ||||||| ||||||
Sbjct 880 GTATGATCGATTGGTATGACTCGGAA-AAAGGATCATGGACAACTATGAAGGGGTTGGAA 938
Query 3625 AGATTACCTAGCACTTTATCACGTTCTAATCGTCTTAAATTGGCG-ATTATGGTGGAAAA 3683
||||| |||| | ||||| || ||| || | |||||||| ||||||||||||||
Sbjct 939 AGATTGCCTAA-AGTTTATG--GT---AAT-GT-T-AAATTGGCATATTATGGTGGAAAA 989
Query 3684 ATGGT 3688
|||||
Sbjct 990 ATGGT 994
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 186169525473
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5