BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg341449
Length=4080
Score E
Sequences producing significant alignments: (Bits) Value
AT3G13290.1 | Symbols: VCR | varicose-related | chr3:4297381-43... 4700 0.0
AT3G13300.1 | Symbols: VCS | Transducin/WD40 repeat-like superf... 4253 0.0
> AT3G13290.1 | Symbols: VCR | varicose-related | chr3:4297381-4303508
FORWARD LENGTH=4566
Length=4566
Score = 4700 bits (2545), Expect = 0.0
Identities = 3614/4116 (88%), Gaps = 129/4116 (3%)
Strand=Plus/Plus
Query 1 ATGGCGTCTTCTCCTGGTAATACTAACCCTCACAATCCTCCTCCGTTTGATCTCGGTATT 60
||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||| |
Sbjct 149 ATGGCGTCTTCACCTGGTAACACTAACCCTCACAATCCTCCGCCGTTCGATCTCGGTACT 208
Query 61 CTCTTCAAACCTTCATCGAATCCTTATCCGCCGCCGCCGGCATCTTATCCTCCGCATACA 120
|||||||||| | || |||| | | | |||||||||| | ||||
Sbjct 209 ATCTTCAAACC--C-TC--ATCC--A----------AC--C--CTTATCCTCCCCCTACA 247
Query 121 GGTCCTTTTCTTCACAATCAGTACGATCAGCAGC-ACTACGCGCCGCCTGGTATCTCCGC 179
||||| |||||| |||| |||||| ||||||| | | |||||||||||||||||| ||||
Sbjct 248 GGTCCGTTTCTTAACAACCAGTACAATCAGCAACTA-TACGCGCCGCCTGGTATCGCCGC 306
Query 180 TCAACCATCGCCGGTGACTC-AGCAGCAACAGGATGTGTCTTCCTCTTCCGCCGCGACTA 238
|||||||| ||||||| || | | ||||||||||||||||||||||||| |||| ||||
Sbjct 307 CCAACCATCTCCGGTGAATCAAAC-GCAACAGGATGTGTCTTCCTCTTCCTCCGCTACTA 365
Query 239 ACTTGCATCCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAA-CCTACAATCGCCC 297
||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct 366 ACTTGCAACCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAATCC-CCAATCTCCC 424
Query 298 CGT-TCCAATCACAATCCCGGTACGCACATCCTCGCTCTCCTCAATAATAACAACGGA-G 355
||| | |||||||||||| || ||||||||||||||||||||| ||||||||| |
Sbjct 425 CGTGT-CAATCACAATCCGGGAACGCACATCCTCGCTCTCCTC------AACAACGGAGG 477
Query 356 TCCCGGTGGCTAACCAAGAGCCGTCGCATCAGCTTCCAGTAGTGAATCACAACGAGATCG 415
| || ||||| ||||||||| | || || | | |||||||||||||||
Sbjct 478 TGCC-GTGGCGAACCAAGAG-C--CG--TC-G----C--------ATCACAACGAGATCG 518
Query 416 CTCG-GTCTTTTCCCGGCGGTTCAGGTCCTATTCGCGTCCCGAGCTGTAAACTGCCCAAG 474
|||| | |||||||||||||||| |||||||||| || || ||| ||||| ||||||||
Sbjct 519 CTCGAG-CTTTTCCCGGCGGTTCGGGTCCTATTCATGTTCCAAGCGGTAAAATGCCCAAG 577
Query 475 GGAAGGCGATTGATTGGTGAACACGCGGTGTACGATGTGGATGTGAGATTACAAGGTGAG 534
|||||||||||| |||||||||| |||||||| ||||| |||||||||||||| || |||
Sbjct 578 GGAAGGCGATTGGTTGGTGAACATGCGGTGTATGATGTTGATGTGAGATTACAGGGAGAG 637
Query 535 ATTCAGCCGCAGCTGGAGGTGACTCCGATTACCAAATACGGCTCGGATCCTCAGCTCGTA 594
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 638 ATTCAACCGCAGCTGGAGGTGACTCCGATTACCAAGTACGGCTCGGATCCTCAGCTTGTA 697
Query 595 GTCGGTAGGCAAATCGCCGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAAC 654
||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
Sbjct 698 CTCGGTAGGCAAATTGCTGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAGC 757
Query 655 ATTAGGGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGA 714
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 ATTCGTGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGA 817
Query 715 GTGACGGACATGGCTTTCTTTGCCGAGGATGTTGATATGTTGGCCAGTGTTAGTCTAGAT 774
|| ||||||||||||||||||||||| |||||| || | || || |||||||||||||||
Sbjct 818 GTAACGGACATGGCTTTCTTTGCCGAAGATGTTCATCTCTTAGCTAGTGTTAGTCTAGAT 877
Query 775 GGAAAAGTTTTCGTGTGGAAAATTTCTGAAGGGTCTGAGGGAGAGGATCAGCCCCAAATA 834
||||||||||| |||||||||||||| ||||| ||||||||||| || || |||| |||
Sbjct 878 GGAAAAGTTTTTGTGTGGAAAATTTCCGAAGGATCTGAGGGAGATGAACAATCCCAGATA 937
Query 835 ACTGGAAAGATAGTACTTGCTCTTCAGATACTAGGAGAGGAAGACACCAAACATCCACGC 894
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 938 ACTGGAAAGATAGTTGTTGCTCTTCAGATACTTGGAGAGGAAGACACCAAACATCCACGT 997
Query 895 GTTTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGTTG 954
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 998 GTCTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGCTG 1057
Query 955 CGAATTGATACTACAAAAGTTGGCAGAGGTGAAGTATTCTCTGCTGAGGCCCCTCTCCAG 1014
||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 1058 CGAATCGATACTACAAAAGTTGGCAGAGGTGAAGTGTTCTCTGCCGAGGCACCTCTCCAG 1117
Query 1015 TGTCCCCTTGATAAACTCATTGATGGTGTTCAGATTGTTGGTAAGCATGATGGAGAAGTT 1074
|||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1118 TGTCATCTTGATAAACTAATTGATGGTGTTCAGATTGTGGGTAAGCATGATGGAGAAGTG 1177
Query 1075 ACTGATTTGTCAATGTGCCAATGGATGACCACACGCCTGGTTTCTTCTTCAGTTGATGGC 1134
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1178 ACAGATTTGTCAATGTGCCAATGGATGACCACGCGCCTGGTTTCTTCTTCAGTTGATGGC 1237
Query 1135 ACGATTAAGATATGGCAAGATCGTAAGGCACAACCACTTGTAGTTTTGAGGCCTCATGAT 1194
||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||
Sbjct 1238 ACGGTTAAGATATGGCAAGATCGTAAGACACAACCACTTGTAGTATTGAGACCTCATGAT 1297
Query 1195 GGACATCCAGTCAGTTCAGCCACGTTTGTGACATCTCCTGAGAGACCTGATCACATCATA 1254
|||| |||||||| ||| |||| ||||||||||| || || ||||||||||||||||||
Sbjct 1298 GGACTTCCAGTCAATTCTGCCATATTTGTGACATCCCCGGAAAGACCTGATCACATCATA 1357
Query 1255 CTTATCACGGGGGGTCCTCTAAATCGAGAAATGAAAATCTGGGTCTCTGCTGGGGAAGAA 1314
|||||||||||||||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct 1358 CTTATCACGGGGGGTCCTCTAAATCGAGAAATCAAGATTTGGGTCTCCGCTGGGGAAGAA 1417
Query 1315 GGGTGGCTTCTACCAGCTGATGCTGAAGCATGGAGGTGCACCCAGACTCTTGATTTGAAA 1374
|||||||||||||| |||||| ||||| | ||||| || |||||||| ||||||||||||
Sbjct 1418 GGGTGGCTTCTACCCGCTGATACTGAATCGTGGAGATGTACCCAGACACTTGATTTGAAA 1477
Query 1375 AGTTCAACTGAGCCACGAGCTGAAGATGCATTTTTTAACCAAGTCATAGCATTATCTGAA 1434
|||||||||||||||| ||||||| | |||||||| ||||||||||||||||| ||||||
Sbjct 1478 AGTTCAACTGAGCCACAAGCTGAAAAGGCATTTTTCAACCAAGTCATAGCATTGTCTGAA 1537
Query 1435 GCAGGCTTGCTTTTACTTGCAAACGCAAAAAGGAACGCTTTATATGCTGTGCATTTGGAC 1494
|||||| ||||||| |||||||| || | ||||||||| ||||| | ||||||||||||
Sbjct 1538 GCAGGCCTGCTTTTGCTTGCAAATGCGAGAAGGAACGCCATATATTCCGTGCATTTGGAC 1597
Query 1495 TATGGTTCTTCTCCAGTTGGTA-CGCGGATGGATTACCTATCAGAGTTTACAGTCACTAT 1553
||||| || |||||||| || | ||| |||||||||| | || |||||||||||||||||
Sbjct 1598 TATGGCTCATCTCCAGT-GGAAACGCTGATGGATTACTTGTCCGAGTTTACAGTCACTAT 1656
Query 1554 GCCCATATTGAGTTTCATTGGGACAAATGATC-CTCCAGAAGAACCCATT-GTTAAGGTT 1611
||| ||||||||||| |||||||||||||||| | ||||||||||| ||| ||||| ||
Sbjct 1657 GCCTATATTGAGTTTTATTGGGACAAATGATCAC-CCAGAAGAACC-ATTTGTTAAAGTG 1714
Query 1612 TATTGTGTTCAGACTCTAGCAATCCAGCAGTATACTTTAGACTTATGCTTATGCTTGCCA 1671
||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||
Sbjct 1715 TATTGTGTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTATTCTTGTGCATGCCA 1774
Query 1672 CCACCTATAGAAAATATGGGTTTGGAGAAGTCAGATTCTAGTGTATCGCGAGAGGCAAAT 1731
|| || | ||| ||| ||||||| |||||||||||||||| ||| || || ||||||||
Sbjct 1775 CCTCCAAGAGAGAATGTGGGTTTTGAGAAGTCAGATTCTACTGTGTCACGGGAGGCAAAC 1834
Query 1732 ATTGTTGAAGGCACGTCAGAACCATCTGGACTTAAGCCTACTGACTTACCTTCAGTTGAT 1791
|||||||| |||||| |||| |||||||| | |||||||| || ||||||||||||| |
Sbjct 1835 CTTGTTGAAAGCACGTTAGAAACATCTGGAATGAAGCCTACCGAATTACCTTCAGTTGGT 1894
Query 1792 TCAGTGCCAAAACCTTCTATTATAGTGAATAGATCGGAAAGTGCTAATAAGTTGAGTTTT 1851
|||||||| ||||| |||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct 1895 TCAGTGCCTAAACCATCTATTTTAGTGAATAGATCGGAAAATGCTAATATGTTGAGTTTT 1954
Query 1852 CCATCAG-CA--G-A--AGC------CACATCTCAAGCAATTGTTCCACCCAATGGTGAA 1899
||| | | | | | ||| |||| | | |||||||||||||||||| |||||
Sbjct 1955 CCAGCGGGCCCTGCATCAGCGGGGATCACACCACCAGCAATTGTTCCACCCAACGGTGAG 2014
Query 1900 CCTAAAACTTCTGGTCTGCCATCTCAGACCAGTGGTGCAGGTTCTACATATGCTACTTCA 1959
|||||||||||||| |||| ||| ||||||||| || || |||| | |||||| |||||
Sbjct 2015 CCTAAAACTTCTGGGATGCCTTCTGAGACCAGTGATGTAGATTCTGCGTATGCTCCTTCA 2074
Query 1960 CCCCAACTTCCTCTAAGTCCCAGACTATCGAGTAAACTTTCTGGCTATCACACTCCTGTA 2019
|| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2075 CCTCAACTTCCTCTAAGCCCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTA 2134
Query 2020 GATGC-TATTGAGCCAGTAATACCTCATCATGAGCTCGGTGGCAAAACCCCTTCTGCTGA 2078
|| || | |||||| ||| |||| |||||| |||| ||||||||||| |||||||||
Sbjct 2135 GAAGCGT-TTGAGCAAGTGCTACCACATCATAAGCTTGGTGGCAAAACAAGTTCTGCTGA 2193
Query 2079 TTATTCTGT-TGAT-AGGCAAA-TGGATGCTATTGGAGAAAGAAATTTGGACGTGTCATC 2135
||||| | | || | ||||||| || ||| | |||||| |||||||||||| ||||| ||
Sbjct 2194 TTATTTT-TATG-TGAGGCAAACTG-ATGATGTTGGAGGAAGAAATTTGGATGTGTCTTC 2250
Query 2136 TGTAGAAGAAAGCTCAAGAAGCAAGGACTCGAATGTTACGCCTGATGATGATGTGTCTGG 2195
||| || |||| || |||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 2251 TGTCGAGGAAAACTGTAGAAGCAAGGACACGAATGTTACACCTGATGATGATGTGTCTGG 2310
Query 2196 GATGCGAAGCCCATCAGCTTTTTTCAAACACCCCACTCATCTTGTAACTCCTTCAGAGAT 2255
||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 2311 GATTCGAAGCCCGTCAGCTTTTTTCAAACAGCCCACTCATCTCGTAACTCCTTCAGAGAT 2370
Query 2256 ATTGATGGGTGTTTCGTCCGCTGAAGCCTCTATTACTACTGAAGACAGGAGAGATAGGGA 2315
||||||||| ||||| ||| |||||||||| |||||||||||||||| ||| ||||| ||
Sbjct 2371 ATTGATGGGCGTTTCTTCCACTGAAGCCTCCATTACTACTGAAGACAAGAGGGATAGAGA 2430
Query 2316 TGCAAATATTCAGGACGTGAATAATGATGCAAGAGACTCCGAAGTTGAGGTGAAAGAAAT 2375
|||||||||| |||| ||||||||||||||||||| || ||||||||| |||||||| |
Sbjct 2431 TGCAAATATTGAGGAAGTGAATAATGATGCAAGAGGCTTAGAAGTTGAGTTGAAAGAAGT 2490
Query 2376 AAGTGTAGCA-AGGTCGACACAGAATGGTGAAATCAA-TGATCATGGTGA-AACTGAGAA 2432
| | | |||| || | | |||||||||||||| || | |||| | | |||||||||
Sbjct 2491 AGGCGAAGCACAGA-CTTCGCAGAATGGTGAAATTAACT-ATCACGAA-ACAACTGAGAA 2547
Query 2433 TCTCACTTCAGAAAATAGAGAAAA-AGTTTTCTGCTCACAGGCTTCAAATCTCAGCACCG 2491
|| ||||||||||| ||||||||| | | ||||||||||||||||||||||||||||| |
Sbjct 2548 TCACACTTCAGAAAGTAGAGAAAATA-TCTTCTGCTCACAGGCTTCAAATCTCAGCACTG 2606
Query 2492 ATATGGCAAGAGACTGTTATCCAACTACTGAGGGAACTTTCATTCCAGGGGAACCTAAGG 2551
| |||||||||||| || |||| | ||| ||||||| | |||||| ||||| ||| ||
Sbjct 2607 AGATGGCAAGAGACCGTCATCCTATTACAGAGGGAAGTGCCATTCCTGGGGATTCTATGG 2666
Query 2552 CTTATGGACAACCTTTA-AAGGCTGGAGATGAAATTGGTCTTGACTCGAGAGGTGTGTCT 2610
||||||||||||||||| ||| |||||||||||| ||||||||||| |||| ||| |||
Sbjct 2667 CTTATGGACAACCTTTACAAG-CTGGAGATGAAAGGGGTCTTGACTCAAGAGATGTCTCT 2725
Query 2611 GCAAAGCTTCCTGAATCGGGTTCATCTAGTGGGCTTTCACAGTTGCCAGGTACAACTAGC 2670
|||||||||||||| |||||||||||||||||| || | || || ||||| ||||
Sbjct 2726 GCAAAGCTTCCTGAGTCGGGTTCATCTAGTGGG-TT--A--GTAGC----TACAAATAGC 2776
Query 2671 AAAGGGAAGAAGCAGAAGGCCAAAAATTCACAGGGTCCCGGTTTGTCATCTACATCCTCA 2730
||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 2777 AAAGGAAAGAAGCAGAAGGCGAAAAATTCACAGGGTCCTGGGTTGTCATCTACATCCTCA 2836
Query 2731 AATGTTGCTAATCTGGCTGACTCCTTCATTGAGCAAAGTCAGAGCTTAAGTCATCCCATG 2790
|||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||
Sbjct 2837 AATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAATCATCCCATG 2896
Query 2791 ACAGATTCACTTCCTCAGTTGTTAGCAATGCAAGAAACGATGAATCAGATAATGGCTTCA 2850
|||||| ||||||||||||||||||| |||||||||| |||| |||| ||||||||||
Sbjct 2897 GCAGATTTACTTCCTCAGTTGTTAGCATTGCAAGAAACAATGACTCAGGTAATGGCTTCG 2956
Query 2851 CAGAAGGAGATGCAGAGACAACTATCAAATGCTACCACTGGCCCTATCGTAAAAGAAAGT 2910
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 2957 CAGAAGGAGATGCAGAGACAACTATCAAATGCTGTCACTGGCCCTATCGTAAAAGAAGGT 3016
Query 2911 AAAAGACTAGAAGTTGCGTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCGGAT 2970
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 3017 AAAAAACTAGAAGTTGCCTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGAT 3076
Query 2971 GCTCTATGGGCCCGCTTCCAAGAGGAGACTGTTAAGAATGAAAAGGCATTGCGTGACCAT 3030
||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 3077 GCTCTATGGGCCCACTTCCAAGAGGAGGCTGTTAAGAATGAAAAGGCATTACGTGACCAT 3136
Query 3031 G-CACAGCAAATTGTGAATGCAACGACAAACTTCATGAGCAAGGAGTTAAATGCCATGTT 3089
| | ||||||||| |||||| |||||||||||||| ||| || |||||||||||||||||
Sbjct 3137 GGC-CAGCAAATTATGAATGAAACGACAAACTTCACGAGTAAAGAGTTAAATGCCATGTT 3195
Query 3090 TGAGAAAACGATAAAGAAGGAAGTTGCTGCAATTGGTCCAGCCCTTA-CACGT-TCAGTA 3147
|||||||||||| ||||||||| ||||| || |||||||| |||| | ||||| | ||||
Sbjct 3196 TGAGAAAACGATGAAGAAGGAATTTGCTTCAGTTGGTCCAACCCT-AGCACGTGT-AGTA 3253
Query 3148 A-TACCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTTCAGAGAGGAAT 3206
| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3254 ACT-CCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTCCAGAGAGGAAT 3312
Query 3207 TGGTGACAAAGCAGTCAATCAGCTTGACAAATCTGTTAATTTAAAGCTTGAAGCAACCAT 3266
||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
Sbjct 3313 TGGTGACAAAGCAGTCAATCAGCTTGAAAAATCTGTTAATTCAAAGCTTGAAACAACCGT 3372
Query 3267 AGCTAGGCAAATTCAAGCCCAATTTCAAACCTCTGGCA-AGCAAGCCCTCCAGGAAGGTC 3325
||| ||||| ||||||||||||||||| || ||||||| | |||| ||| ||||||||||
Sbjct 3373 AGCCAGGCAGATTCAAGCCCAATTTCAGACATCTGGCAGA-CAAGTCCTGCAGGAAGGTC 3431
Query 3326 TTAGGTCAAGTGTGGAGTCCTCAGTCATACCTTCCTTTGAGAGGGCATGCAAGGCCATGT 3385
||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 3432 TTAGGTCAAGTATGGAGTCCTCAGTCATACCTTCCTTTGAGAGGTCATGCAAAACCATGT 3491
Query 3386 TTGACCAAATAGACTCAGCCTTCCAGAAAGGTATTGCTGAGTATACAAATGCAGCCCAGC 3445
|||| ||| |||||||| |||| |||||||| |||| | || | || | ||| | ||||
Sbjct 3492 TTGAGCAAGTAGACTCAACCTTACAGAAAGGAATTGGTAAGCACACGAGCGCAACACAGC 3551
Query 3446 AACGGTTTGACTCTGGACATTCCCAGCTTGCTCATACTTTAAGGGAAACAATTACTTCTG 3505
||||| ||||||||||||| || ||||||||||||||| | |||||||| |||| |||||
Sbjct 3552 AACGGATTGACTCTGGACAATCTCAGCTTGCTCATACTCTGAGGGAAACCATTAGTTCTG 3611
Query 3506 CGTCGTCAGTTGCTCAAGCCTTAAGTCGTGAATTAGCCGAGAGCCAAAGGAATCTCTTAG 3565
| || |||||| |||||||| ||| |||||||||||||||||| |||||||||| |||||
Sbjct 3612 CATCATCAGTTACTCAAGCCCTAAATCGTGAATTAGCCGAGAGTCAAAGGAATCGCTTAG 3671
Query 3566 CTCTCGCAGCTGCTGGAGCTAATTCTGGTGGGTCTAATCCCTTGGTTACTCAACTAAGTG 3625
||||| ||||||||||| | || | ||||||||||||||||||||||
Sbjct 3672 CTCTCACAGCTGCTGGATC-AA-------------A-TCCCTTGGTTACTCAACTAAGTA 3716
Query 3626 GCGGACCTTTGGGTGCTCTTCTTGACAAGGTTGAAGCACCTATGGACCCAACAACAGAAC 3685
||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 3717 ACGGGCCTTTAGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAGC 3776
Query 3686 TATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACTTCGGCCCTACAGAGAA 3745
||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||
Sbjct 3777 TATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACATCAGCTCTACAAAGAA 3836
Query 3746 GCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTCCGTGGATTACTGGCAA 3805
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
Sbjct 3837 GCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTTCGTGGACTACTGGCGA 3896
Query 3806 TGAATCCGCTACCGCTGAGCCAAGGCGTGCTTCTTTCACTGCTGCAGCAGCTAGCCTGCG 3865
|||||||||| |||||||||||||| |||||||||||||||||||||||| |||| || |
Sbjct 3897 TGAATCCGCTTCCGCTGAGCCAAGGTGTGCTTCTTTCACTGCTGCAGCAGTTAGCTTGTG 3956
Query 3866 ACATCAGCAAGGACACATCCCGTAAGCT-GGCTTGGATGACTGATGTGGTTGCAGCCATA 3924
|||| |||| |||||||||||||||||| || ||||||||||||||||||| ||||||||
Sbjct 3957 ACATAAGCACGGACACATCCCGTAAGCTAGG-TTGGATGACTGATGTGGTTACAGCCATA 4015
Query 3925 AACCCATCAGACCAGATGATTGCGGTCCACGCTCGCCCAATCTTCGAACAGGTCTATCAG 3984
||||||||||| |||||||| |||||||| |||||||||||||| ||||| || ||||||
Sbjct 4016 AACCCATCAGATCAGATGATAGCGGTCCATGCTCGCCCAATCTTTGAACAAGTTTATCAG 4075
Query 3985 ATTCTGCACCATCACCGCAACGCACCAGGCAGCGATGTCTCAGCCATCAGACTGATAATG 4044
||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||| ||||||
Sbjct 4076 ATTTTGCACCATCACCGTAACGCACCAGGCAGCGACGTCTCTGCCGTCAGACTAATAATG 4135
Query 4045 CATGTCATCAACTCCATGCTTATGGGCTGCAAATGA 4080
|| ||||||||||| | |||||| |||||||||||
Sbjct 4136 CACGTCATCAACTCTTTACTTATGAGCTGCAAATGA 4171
> AT3G13300.1 | Symbols: VCS | Transducin/WD40 repeat-like superfamily
protein | chr3:4303874-4310213 FORWARD LENGTH=4510
Length=4510
Score = 4253 bits (2303), Expect = 0.0
Identities = 2518/2624 (96%), Gaps = 5/2624 (0%)
Strand=Plus/Plus
Query 1 ATGGCGTCTTCTCCTGGTAATACTAACCCTCACAATCCTCCTCCGTTTGATCTCGGTATT 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 212 ATGGCGTCTTCTCCTGGTAATACTAACCCTCACAATACTCCTCCGTTTGATCTCGGTATT 271
Query 61 CTCTTCAAACCTTCATCGAATCCTTATCCGCCGCCGCCGGCATCTTATCCTCCGCATACA 120
||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||
Sbjct 272 CTCTTCAAACCTTCATCCAATCCTTATCCGCCACCGGCGGCATCTTATCCTCCGCCTACA 331
Query 121 GGTCCTTTTCTTCACAATCAGTACGATCAGCAGCACTACGCGCCGCCTGGTATCTCCGCT 180
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 332 GGTCCTTTTCTTCACAACCAGTACGATCAGCAGCACTACGCTCCGCCTGGTATCTCCGCT 391
Query 181 CAACCATCGCCGGTGACTCAGCAGCAACAGGATGTGTCTTCCTCTTCCGCCGCGACTAAC 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 CAACCATCTCCGGTGACTCAGCAGCAACAGGATGTGTCTTCCTCTTCCGCCGCGACTAAC 451
Query 241 TTGCATCCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAACCTACAATCGCCCCGT 300
|||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct 452 TTGCATCCTCAGAGAACGCTGTCTTATCCCACGCCACCTCTCAATCTACAATCCCCCCGT 511
Query 301 TCCAATCACAATCCCGGTACGCACATCCTCGCTCTCC-T--CAATAATAACAACGGAGTC 357
||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| |
Sbjct 512 TCCAATCACAATCCCGGTACGCACATCCTCGCTCTCCTTAACAATACCAACAACGGAGCC 571
Query 358 CCGGTGGCTAACCAAGAGCCGTCGCATCAGCTTCCAGTAGTGAATCACAACGAGATCGCT 417
|| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 572 CCCGTGGCTAACCAAGAGCCGTCGCATCAGCTCCCAGTAGTCAATCACAACGAGATCGCT 631
Query 418 CGGTCTTTTCCCGGCGGTTCAGGTCCTATTCGCGTCCCGAGCTGTAAACTGCCCAAGGGA 477
|| ||||||||||||||||||||||||||||| || |||||||||||| |||||||||||
Sbjct 632 CGCTCTTTTCCCGGCGGTTCAGGTCCTATTCGTGTACCGAGCTGTAAATTGCCCAAGGGA 691
Query 478 AGGCGATTGATTGGTGAACACGCGGTGTACGATGTGGATGTGAGATTACAAGGTGAGATT 537
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 692 AGGCGATTGATTGGTGAACACGCTGTGTACGATGTTGATGTGAGATTACAAGGTGAGATT 751
Query 538 CAGCCGCAGCTGGAGGTGACTCCGATTACCAAATACGGCTCGGATCCTCAGCTCGTAGTC 597
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 752 CAGCCGCAGCTGGAGGTGACTCCGATTACCAAATACGGGTCGGATCCTCAGCTCGTAGTG 811
Query 598 GGTAGGCAAATCGCCGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAACATT 657
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 812 GGTAGGCAAATCGCCGTGAATAAGGTTTACATTTGCTATGGATTGAAAGGAGGAAACATT 871
Query 658 AGGGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGAGTG 717
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 872 AGGGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCACAGAGAGTG 931
Query 718 ACGGACATGGCTTTCTTTGCCGAGGATGTTGATATGTTGGCCAGTGTTAGTCTAGATGGA 777
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 932 ACGGATATGGCTTTCTTTGCCGAGGATGTTGATATGTTGGCCAGTGTTAGCCTAGATGGA 991
Query 778 AAAGTTTTCGTGTGGAAAATTTCTGAAGGGTCTGAGGGAGAGGATCAGCCCCAAATAACT 837
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 AAAGTTTTTGTGTGGAAAATTTCTGAAGGGTCTGAGGGAGAGGATCAGCCCCAAATAACT 1051
Query 838 GGAAAGATAGTACTTGCTCTTCAGATACTAGGAGAGGAAGACACCAAACATCCACGCGTT 897
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 GGGAAGATAGTACTTGCTCTTCAGATACTAGGAGAGGAAGACACCAAACATCCACGCGTT 1111
Query 898 TGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGTTGCGA 957
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1112 TGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTACTGCGT 1171
Query 958 ATTGATACTACAAAAGTTGGCAGAGGTGAAGTATTCTCTGCTGAGGCCCCTCTCCAGTGT 1017
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1172 ATTGATACTACAAAAGTTGGCAGAGGTGAAGTATTCTCTGCTGAGGCTCCTCTCCAGTGT 1231
Query 1018 CCCCTTGATAAACTCATTGATGGTGTTCAGATTGTTGGTAAGCATGATGGAGAAGTTACT 1077
||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1232 CCCCTTGATAAGCTGATCGATGGTGTTCAGATTGTTGGTAAGCATGATGGAGAAGTGACA 1291
Query 1078 GATTTGTCAATGTGCCAATGGATGACCACACGCCTGGTTTCTTCTTCAGTTGATGGCACG 1137
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1292 GATTTGTCAATGTGCCAATGGATGACCACGCGTCTGGTTTCTTCTTCAGTTGATGGCACG 1351
Query 1138 ATTAAGATATGGCAAGATCGTAAGGCACAACCACTTGTAGTTTTGAGGCCTCATGATGGA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 ATTAAGATATGGCAAGATCGTAAGGCACAACCACTTGTAGTTTTGAGGCCTCATGATGGA 1411
Query 1198 CATCCAGTCAGTTCAGCCACGTTTGTGACATCTCCTGAGAGACCTGATCACATCATACTT 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 CATCCAGTCAGTTCAGCCACGTTTGTGACATCTCCTGAGAGACCTGATCACATCATACTT 1471
Query 1258 ATCACGGGGGGTCCTCTAAATCGAGAAATGAAAATCTGGGTCTCTGCTGGGGAAGAAGGG 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 ATCACGGGGGGTCCTCTAAATCGAGAAATGAAAATCTGGGTCTCTGCTGGGGAAGAAGGG 1531
Query 1318 TGGCTTCTACCAGCTGATGCTGAAGCATGGAGGTGCACCCAGACTCTTGATTTGAAAAGT 1377
|||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct 1532 TGGCTTTTACCAGCTGATGCTGAATCATGGAGGTGTACCCAGACTCTTGACTTGAAAAGT 1591
Query 1378 TCAACTGAGCCACGAGCTGAAGATGCATTTTTTAACCAAGTCATAGCATTATCTGAAGCA 1437
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1592 TCAACCGAGCCACGAGCTGAAGAGGCATTTTTTAACCAAGTCATAGCATTATCTGAAGCA 1651
Query 1438 GGCTTGCTTTTACTTGCAAACGCAAAAAGGAACGCTTTATATGCTGTGCATTTGGACTAT 1497
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1652 GGCTTGCTTTTACTTGCAAATGCAAAAAGGAACGCCTTATATGCTGTGCATTTGGACTAT 1711
Query 1498 GGTTCTTCTCCAGTTGGTACGCGGATGGATTACCTATCAGAGTTTACAGTCACTATGCCC 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 GGTTCTTCTCCAGTTGGTACGCGGATGGATTACCTATCAGAGTTTACAGTCACTATGCCC 1771
Query 1558 ATATTGAGTTTCATTGGGACAAATGATCCTCCAGAAGAACCCATTGTTAAGGTTTATTGT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1772 ATATTGAGTTTCATTGGGACAAATGATCCTCCAGAAGAACCCATTGTTAAGGTTTATTGT 1831
Query 1618 GTTCAGACTCTAGCAATCCAGCAGTATACTTTAGACTTATGCTTATGCTTGCCACCACCT 1677
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1832 GTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTGTGCTTATGCTTGCCACCACCT 1891
Query 1678 ATAGAAAATATGGGTTTGGAGAAGTCAGATTCTAGTGTATCGCGAGAGGCAAATATTGTT 1737
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1892 ATAGAAAATATGGGTTTGGAGAAGTCAGATTCTAGTGTATCACGAGAGGCAAATCTTGTT 1951
Query 1738 GAAGGCACGTCAGAACCATCTGGACTTAAGCCTACTGACTTACCTTCAGTTGATTCAGTG 1797
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1952 GAAGGCATGTCAGAACCATCTGGACTTAAACCTACTGACTTACCTTCAGTTGATTCAGTG 2011
Query 1798 CCAAAACCTTCTATTATAGTGAATAGATCGGAAAGTGCTAATAAGTTGAGTTTTCCATCA 1857
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2012 CCAAAACCTTCGATTATAGTGAATAGATCAGAAAGTGCTAATAAGTTGAGTTTTCCATCA 2071
Query 1858 GCAGAAGCCACATCTCAAGCAATTGTTCCACCCAATGGTGAACCTAAAACTTCTGGTCTG 1917
|| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 2072 GCGGAAGCCACATCACAAGCAATTGTTCCACCCAACGGTGAACCTAAAACTTCTGGCCTG 2131
Query 1918 CCATCTCAGACCAGTGGTGCAGGTTCTACATATGCTACTTCACCCCAACTTCCTCTAAGT 1977
|||||||| |||||||||||||||||| | |||||||||| ||||||||||||||| |||
Sbjct 2132 CCATCTCAAACCAGTGGTGCAGGTTCTGCGTATGCTACTTTACCCCAACTTCCTCTCAGT 2191
Query 1978 CCCAGACTATCGAGTAAACTTTCTGGCTATCACACTCCTGTAGATGCTATTGAGCCAGTA 2037
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2192 CCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTAGAGGCGATTGAGCCAGTA 2251
Query 2038 ATACCTCATCATGAGCTCGGTGGCAAAACCCCTTCTGCTGATTATTCTGTTGATAGGCAA 2097
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2252 ATACCTCATCATGAGCTTGGTGGCAAAACACCTTCTGCTGATTACTCTGTTGATAGGCAA 2311
Query 2098 ATGGATGCTATTGGAGAAAGAAATTTGGACGTGTCATCTGTAGAAGAAAGCTCAAGAAGC 2157
||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 2312 ATGGATGCTGTTGGAGAAAGAAATTTGGACGTGTCATCCGTAGAAGAAATCTCAAGAAGC 2371
Query 2158 AAGGACTCGAATGTTACGCCTGATGATGATGTGTCTGGGATGCGAAGCCCATCAGCTTTT 2217
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2372 AAGGACTCAAATGTTACGCCTGATGATGATGTGTCTGGGATGCGAAGCCCATCAGCTTTT 2431
Query 2218 TTCAAACACCCCACTCATCTTGTAACTCCTTCAGAGATATTGATGGGTGTTTCGTCCGCT 2277
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 2432 TTCAAACACCCCACTCATCTTGTAACTCCTTCAGAGATATTGATGGGCGTTTCTTCCGCT 2491
Query 2278 GAAGCCTCTATTACTACTGAAGACAGGAGAGATAGGGATGCAAATATTCAGGACGTGAAT 2337
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2492 GAAGCCTCCATTACTACTGAAGACAGGAGAGATAGGGATGCAAATATTCAGGACGTGAAT 2551
Query 2338 AATGATGCAAGAGACTCCGAAGTTGAGGTGAAAGAAATAAGTGTAGCAAGGTCGACACAG 2397
|||||| |||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct 2552 AATGATCCAAGAGACACCGAAGTAGAGGTGAAAGAAATAAGTGAAGCAAGGTCAACACAG 2611
Query 2398 AATGGTGAAATCAATGATCATGGTGAAACTGAGAATCT-CACTTCAGAAAATAGAGAAAA 2456
|||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||
Sbjct 2612 AATGGTGAAATCAATGATCATGACGAAACTGAGAAT-TGCACTTCAGAAAATAGAGAAAA 2670
Query 2457 AGTTTTCTGCTCACAGGCTTCAAATCTCAGCACCGATATGGCAAGAGACTGTTATCCAAC 2516
||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||| |
Sbjct 2671 AGTCTTCTGCTCACAGGTTTCAAATCTCAGCACTGAGATGGCAAGAGACTGTTATCCTAG 2730
Query 2517 TACTGAGGGAACTTTCATTCCAGGGGAACCTAAGGCTTATGGACAACCTTTAAAGGCTGG 2576
|||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||
Sbjct 2731 TACTGAGGGAACTTTCATTCCAGGGGAATCTAAGGCATATGGACAACCTATAAAGGCTGG 2790
Query 2577 AGATGAAATTGGTCTTGACTCGAGAGGTGTGTCTGCAAAGCTTC 2620
|||||||| |||| ||||||||||||||| | ||||||||||||
Sbjct 2791 AGATGAAAGTGGTGTTGACTCGAGAGGTGGGCCTGCAAAGCTTC 2834
Score = 2316 bits (1254), Expect = 0.0
Identities = 1360/1412 (96%), Gaps = 4/1412 (0%)
Strand=Plus/Plus
Query 2671 AAAGGGAAGAAGCAGAAGGCCAAAAATTCACAGGGTCCCGGTTTGTCATCTACATCCTCA 2730
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2837 AAAGGAAAGAAGCAGAAGGCCAAAAATTCACAGGGTCCCGGTTTGTCATCTACATCCTCA 2896
Query 2731 AATGTTGCTAATCTGGCTGACTCCTTCATTGAGCAAAGTCAGAGCTTAAGTCATCCCATG 2790
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 2897 AATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAGTCATCCCATG 2956
Query 2791 ACAGATTCACTTCCTCAGTTGTTAGCAATGCAAGAAACGATGAATCAGATAATGGCTTCA 2850
||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2957 ACAGATTTACTTCCTCAGTTGTTAGCAATGCAAGAAACGATGAATCAGGTGATGGCTTCG 3016
Query 2851 CAGAAGGAGATGCAGAGACAACTATCAAATGCTACCACTGGCCCTATCGTAAAAGAAAGT 2910
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 3017 CAGAAGGAGATGCAGAGACAACTATCAAATGCTGCCACTGGCCCTATCGGAAAAGAAAGT 3076
Query 2911 AAAAGACTAGAAGTTGCGTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCGGAT 2970
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3077 AAAAGACTAGAAGTTGCGTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGAT 3136
Query 2971 GCTCTATGGGCCCGCTTCCAAGAGGAGACTGTTAAGAATGAAAAGGCATTGCGTGACCAT 3030
||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 3137 GCTCTATGGGCCCGCATCCAGGAGGAGACTGTTAAGAATGAAAAGGCATTACGTGACCAT 3196
Query 3031 GCACAGCAAATTGTGAATGCAACGACAAACTTCATGAGCAAGGAGTTAAATGCCATGTTT 3090
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3197 GCCCAGCAAATTGTGAATGCAACGACAAACTTCATGAGCAAGGAGTTAAATGCCATGTTT 3256
Query 3091 GAGAAAACGATAAAGAAGGAAGTT-GCTGCAATTGGTCCAGCCCTTA-CACGTTCAGTAA 3148
||||||||||||||||| ||| || ||||||||||||||||||| || |||||||||||
Sbjct 3257 GAGAAAACGATAAAGAAAGAA-TTGGCTGCAATTGGTCCAGCCC-TAGCACGTTCAGTAG 3314
Query 3149 TACCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTTCAGAGAGGAATTG 3208
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3315 TACCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTTCAGAGAGGAATAG 3374
Query 3209 GTGACAAAGCAGTCAATCAGCTTGACAAATCTGTTAATTTAAAGCTTGAAGCAACCATAG 3268
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 3375 GTGACAAAGCAGTTAATCAGCTTGACAAATCTGTTAATATAAAGCTTGAAGCAACCGTAG 3434
Query 3269 CTAGGCAAATTCAAGCCCAATTTCAAACCTCTGGCAAGCAAGCCCTCCAGGAAGGTCTTA 3328
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3435 CTAGGCAAATTCAAGCCCAATTTCAGACCTCTGGCAAGCAAGCCCTCCAGGAAGGTCTTA 3494
Query 3329 GGTCAAGTGTGGAGTCCTCAGTCATACCTTCCTTTGAGAGGGCATGCAAGGCCATGTTTG 3388
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3495 GGTCAAGTGTGGAGTCCTCAGTCATACCTTCCTTTGAGAAGGCATGCAAGGCCATGTTTG 3554
Query 3389 ACCAAATAGACTCAGCCTTCCAGAAAGGTATTGCTGAGTATACAAATGCAGCCCAGCAAC 3448
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3555 ACCAAATAGACTCAGCCTTCCAGAAAGGTATTGCTGAGCATACAAATGCAGCCCAGCAAC 3614
Query 3449 GGTTTGACTCTGGACATTCCCAGCTTGCTCATACTTTAAGGGAAACAATTACTTCTGCGT 3508
|||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||
Sbjct 3615 GGTTTGACTCTGGACACTCCCAGCTTGCTCATACTCTAAAGGAATCAATTACTTCTGCGT 3674
Query 3509 CGTCAGTTGCTCAAGCCTTAAGTCGTGAATTAGCCGAGAGCCAAAGGAATCTCTTAGCTC 3568
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 3675 CGTCAGTTGCTCAAGCCTTAAGTCGTGAGTTAGCCGAGACCCAAAGGAATCTCTTAGCTC 3734
Query 3569 TCGCAGCTGCTGGAGCTAATTCTGGTGGGTCTAATCCCTTGGTTACTCAACTAAGTGGCG 3628
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3735 TCGCAGCTGCTGGAGCAAATTCTGGTGGGTCTAATTCCTTGGTTACTCAACTAAGTGGCG 3794
Query 3629 GACCTTTGGGTGCTCTTCTTGACAAGGTTGAAGCACCTATGGACCCAACAACAGAACTAT 3688
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3795 GACCTTTGGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAACTAT 3854
Query 3689 CAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACTTCGGCCCTACAGAGAAGCG 3748
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3855 CGAGGTTGATATCTGAACGGAAGTACGAAGAATCTTTCACTTCGGCCCTACAGAGAAGCG 3914
Query 3749 ATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTCCGTGGATTACTGGCAATGA 3808
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 3915 ATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTACGTGGATTACTGGCGATGA 3974
Query 3809 ATCCGCTACCGCTGAGCCAAGGCGTGCTTCTTTCACTGCTGCAGCAGCTAGCCTGCGACA 3868
||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3975 ATCCGCTTCCACTGAGCCAAGGCGTGCTTCTTTCACTGCTGCAGCAGCTAGCCTGTGACA 4034
Query 3869 TCAGCAAGGACACATCCCGTAAGCTGGCTTGGATGACTGATGTGGTTGCAGCCATAAACC 3928
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4035 TTAGCAAGGACACATCCCGTAAGCTGGCTTGGATGACTGATGTGGTTGCAGCCATAAACC 4094
Query 3929 CATCAGACCAGATGATTGCGGTCCACGCTCGCCCAATCTTCGAACAGGTCTATCAGATTC 3988
||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct 4095 CATCAGACCAGATGATTGCGGTCCACGCTCGGCCAATCTTTGAACAGGTATATCAGATTC 4154
Query 3989 TGCACCATCACCGCAACGCACCAGGCAGCGATGTCTCAGCCATCAGACTGATAATGCATG 4048
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 4155 TGCACCATCACCGCAACGCACCGGGAAGCGATGTCTCAGCCATCAGACTGATAATGCACG 4214
Query 4049 TCATCAACTCCATGCTTATGGGCTGCAAATGA 4080
| |||||||||||||||||||| |||||||||
Sbjct 4215 TGATCAACTCCATGCTTATGGGTTGCAAATGA 4246
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 203326619979
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5