BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg341528 Length=519 Score E Sequences producing significant alignments: (Bits) Value AT4G11950.1 | Symbols: | Protein of unknown function (DUF1191)... 619 7e-177 > AT4G11950.1 | Symbols: | Protein of unknown function (DUF1191) | chr4:7173276-7174259 REVERSE LENGTH=984 Length=984 Score = 619 bits (335), Expect = 7e-177 Identities = 458/515 (89%), Gaps = 18/515 (3%) Strand=Plus/Plus Query 1 ATGGGCACGGAACAAAACTCTATTTTGATCAAGTTCTTGAGTAGCGTGGCAAGTGGGAGC 60 |||||||||||||||||| ||||||||||||| ||||| || || | ||||||||| ||| Sbjct 463 ATGGGCACGGAACAAAACCCTATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGC 522 Query 61 CCTAAACCTAACAC---GAAGAACTCATCTCTCTTGTGTGCTTGCTTCACAAGTAACGGT 117 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 523 CCTAAACCTAACACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGT 582 Query 118 AACATAACGTTTAGGGAGCAAGTTTCAGCCTCCGTTTTCTTGGGAACAAGACAAGGGCAT 177 |||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 583 AACATAACGTTTAGAGAGCAAGTTTCAGCTTATGTTTGCTTGGGAACAAGACAAGGGCAT 642 Query 178 TATGTGCTGGTGATTAGAGCTCATGATAGTAGTGGTCGTGGTAGTACGTTGGTAACGCCG 237 || | ||| ||||||||||||||||||||| | ||| | ||||||||| ||||||| ||| Sbjct 643 TACGCGCTTGTGATTAGAGCTCATGATAGTGGCGGTGGCGGTAGTACGGTGGTAACACCG 702 Query 238 CCGTCATCTCCGGCGGTGAATGACGGTGGCGGAGGGAGATT-AGC-GGT------TGG-G 288 ||||||||||||| ||| ||||||||||||||||| ||| ||| ||| ||| | Sbjct 703 TCGTCATCTCCGGCTTTGACTGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCG 762 Query 289 ------AGTGTAATTGGGTCAATGATTGGAGCGTTTCTGTTACGGTTATTGGTGGTGGCG 342 ||||| || || ||||| |||||||||||||||||| ||||||||||||||||| Sbjct 763 GTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCG 822 Query 343 ATGGTAGTGAAAGGGGAGAAGAAAACGATgagagaggagatggagaggagagCTTATGAA 402 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 823 ATGGTAGTGAAAGGGAAGAAGAAAGCGATGAGAGAGGAGATGGAGAGGAGAGCTTATGAA 882 Query 403 GAAGAAGCACTTCCGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCAAGA 462 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 883 GAAGAAGCACTTCAGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGA 942 Query 463 ACAAGAACGGTTCCAAGATTTGACAATACTAGGTA 497 |||||||| ||||||||||||| ||||||||||| Sbjct 943 TCAAGAACGATTCCAAGATTTGAAAATACTAGGTA 977 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24815668618 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5