BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg341583
Length=1041
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14520.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 780 0.0
AT1G31950.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 739 0.0
AT3G14540.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 732 0.0
AT3G14490.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 418 5e-116
> AT3G14520.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr3:4875748-4878336 REVERSE
LENGTH=2031
Length=2031
Score = 780 bits (422), Expect = 0.0
Identities = 594/674 (88%), Gaps = 23/674 (3%)
Strand=Plus/Plus
Query 44 CTCACTGTCTTAAGACAAACCTCTCTCTCTTTCCT---CGTTTGCTTC-ACAGCCACACT 99
||| |||||| | | | |||||||||||||||||| |||||||||| | || ||||||
Sbjct 143 CTCTCTGTCTCACGTCCAACCTCTCTCTCTTTCCTCAGCGTTTGCTTCAAAAG-CACACT 201
Query 100 -TTTTCTTGGAAGCCCGC---AAAACACGACTT-GT-TCGTTGTAAGGTCTACTAAGAGT 153
|| | | ||| || || ||||||| |||| || | | |||||||||||| ||||||
Sbjct 202 CTTCCCCT-GAAACCGGCAAAAAAACACCACTTGGTAT-G-TGTAAGGTCTACAAAGAGT 258
Query 154 AATGATGATCTTGAGAGTAGTCGTCCTTTGACGCAATTTTCTCCCTCTCTTTGGGGAGAT 213
| ||||||||||||| |||||||||||| ||| | ||||||||||||||||||||||||
Sbjct 259 AGTGATGATCTTGAGGGTAGTCGTCCTTCAACGTACTTTTCTCCCTCTCTTTGGGGAGAT 318
Query 214 CAC-TTCTTCTCTGTTTCCCTCGATAGCGCTGAATTTTATGAACTAGAAAGAGAGATTAA 272
||| ||| |||||||||||||||| ||| ||||||| |||||||||||||||||||| |
Sbjct 319 CACTTTC-TCTCTGTTTCCCTCGACCGCGGTGAATTTGATGAACTAGAAAGAGAGATTGA 377
Query 273 AACTACCAAGCCACTGGTGAGAGACATGCTCATGTCTTCTCACAGCAGCGACAAGGAGAA 332
||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 378 AACTATGAAGCCACTGGTGAAAGACATGCTCATGTCTTCTCAAAGCAGCGACAAGGAGAA 437
Query 333 GATTCGTTTCATCCATTTGCTTGTCAGCATGGGGATCTCTTATCATTTTGATAAGGACAT 392
||||||| | ||||||||||| || ||| | |||| ||||||||||||||||||||| ||
Sbjct 438 GATTCGTCTAATCCATTTGCTCGTTAGCCTCGGGAGCTCTTATCATTTTGATAAGGAGAT 497
Query 393 TCAAGAGATCCTTAACCACAGTTTTACAAAGTTGGAAGACATAATAGACAAGGAAAATGA 452
|||||| |||||||| |||||||| ||||||||||| |||||||||| |||| ||||
Sbjct 498 TCAAGATATCCTTAAACACAGTTTCACAAAGTTGGATGACATAATAGTTGGGGAAGATGA 557
Query 453 TTTGGAAACAATCTCCATTATGTTTGAGGTCTTTAGGCTATACGGTCACAAGATGTCTTA 512
|||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 558 TTTGGAGACAATCTCCATCATGTTTGAGGTCTTTAGACTATACGGTCACAAGATGTCTTG 617
Query 513 TGATGCCTTTGATAGATTCAGAGGTAAAGATGGGAGGTTCAAGGAGAGTCTAGCCACAGA 572
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 618 TGATGCCTTTGATAGATTCAGAGGTGAAGATGGGAGGTTCAAGGAGAGTCTAGCCAAAGA 677
Query 573 TGTTAGAGGAATGCTACAGTTGTTC-CAGTTCGCGCATCTCGGAACACCCTCTGAAGATA 631
||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct 678 TGTTAGAGGAATGCTACAGTTGTTCGAAG-TCGCGCATCTAGGAACACCCTCTGAAGATA 736
Query 632 TAATGGACGAAGCAAT-GAGTTTCGCGCGGAATCACTTGGAGTCTTGGATAGGTGGTAAC 690
|||||||||||||| | ||||||||| | |||||||||||| ||||||||||||||||||
Sbjct 737 TAATGGACGAAGCA-TCGAGTTTCGCCCAGAATCACTTGGATTCTTGGATAGGTGGTAAC 795
Query 691 -TA-CTGGTGGCAA 702
|| | |||| |||
Sbjct 796 GTATCCGGTG-CAA 808
Score = 425 bits (230), Expect = 3e-118
Identities = 310/349 (89%), Gaps = 4/349 (1%)
Strand=Plus/Plus
Query 691 TACTGGTGGCAAGAGAATATATATCTTAATTACTACGAACAAGAAGGAGGTCACAATGAG 750
|||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct 872 TACTAGTGGCAAGAGAATATATATC----TTACTACGAACAAGAAGAAGGTCACAACAAG 927
Query 751 ATCCTGCTCAAGTTTGCAAAGCTTAACTTCAACTTTTGCCAGTTTCATTACATCCAAGAA 810
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 928 ATCCTGCTCAAGTTTGCAAAGCTTAACTTCAACTTTTGCCAGTTTCATTATATCCAAGAA 987
Query 811 CTCAAAACTCTCACCAAATGGTGGAAGGACTTAGATCTTGTATCTAAGTTACCTTACATT 870
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 988 CTCAAAACTCTCACCAAATGGTGGAAGGACCTAGATCTTGCATCTAAGTTACCTTACATT 1047
Query 871 AGGGATAGACTTGTGGAGTGCCATTTCGCGTCTCTGGGAACGTATTTTGAGCCACAATAT 930
|||||||||||||| ||| ||||| ||| | | |||| |||| || |||||||| |||
Sbjct 1048 AGGGATAGACTTGTAGAGAGCCATCTCGGGGGTTTGGGGCCGTACTTCGAGCCACACTAT 1107
Query 931 TCCCTTGGGAGAATAATATTGGCTAAAATCATGATGATTGTGGTTGTTGTGGATGACACA 990
|| |||||||| || ||| ||||||||||||| |||| |||||||||||||||||||
Sbjct 1108 TCTCTTGGGAGGATCATAGTGGCTAAAATCATCATGACCATGGTTGTTGTGGATGACACT 1167
Query 991 TATGATGCATATGCAACTCTTCCCGAAGTTACCGCTCTTACGGAATGTT 1039
||||||||| |||||||| | ||||||||| | | |||||| |||||||
Sbjct 1168 TATGATGCACATGCAACTGTACCCGAAGTTGCGGTTCTTACCGAATGTT 1216
> AT1G31950.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr1:11475807-11478194 FORWARD
LENGTH=1821
Length=1821
Score = 739 bits (400), Expect = 0.0
Identities = 552/624 (88%), Gaps = 15/624 (2%)
Strand=Plus/Plus
Query 79 CGTTTGCTTCACAGCCACACTTTTTCTTGGAAGCCCGCAAAAC-AC--GACTTGTTCGTT 135
||||||||||||||||||||| ||||||||| |||||||||| || ||||| || |||
Sbjct 91 CGTTTGCTTCACAGCCACACTCCTTCTTGGAAACCCGCAAAACAACAAGACTTTTTTGTT 150
Query 136 GTAAGGTCTACT---AAGAGTAATGATGATCTTGAGAGTAGTCGTCCTTTGACGCAATTT 192
| ||| ||| || ||||||| |||||||||||||||||||| ||| | |||| |||
Sbjct 151 GCAAGTTCTTCTAAGAAGAGTAGTGATGATCTTGAGAGTAGTCTTCCAACGCCGCACTTT 210
Query 193 TCTCCCTCTCTTTGGGGAGATCACTTCTTCTCTGTTTCCCTCGATAGCGC--T-GAATTT 249
||||| ||||||||||||||||||||| |||||||||||||| | |||| | || |||
Sbjct 211 TCTCCTTCTCTTTGGGGAGATCACTTCCTCTCTGTTTCCCTCAACCGCGCTGTGGAGTTT 270
Query 250 TATGAACTAGAAAGAGAGATTAAAACTACCAAGCCACTGGTGAGAGACATGCTCATGTCT 309
|||| ||||||||||||||| ||||||| ||||| |||| |||||||| ||||||||||
Sbjct 271 GATGAGCTAGAAAGAGAGATTGAAACTACGAAGCCGCTGGCGAGAGACAAGCTCATGTCT 330
Query 310 TCTCACAGCAGCGACAAGGAGAAGATTCGTTTCATCCATTTGCTTGTCAGCATGGGGATC 369
||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 331 TCTGAAAGCAGCGACAAGGAGAAGATTCGCCTCATCCATTTGCTTGTCAGCATGGGGATC 390
Query 370 TCTTATCATTTTGATAAGGACATTCAAGAGATCCTTAACCACAGTTTTACAAAGTTGGAA 429
|||||||||||||||||||| |||||||| |||||||| |||||||| |||||||| ||
Sbjct 391 TCTTATCATTTTGATAAGGAGATTCAAGACATCCTTAAACACAGTTTCACAAAGTTAGAT 450
Query 430 GACATAATAGACAAGGA-AA-ATGATTTGGAAACAATCTCCATTATGTTTGAGGTCTTTA 487
||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct 451 GACATTATAGTT--GGAGAAGATGATTTGGAAACAATCTCCATCATGTTTGAGGTCTTTA 508
Query 488 GGCTATACGGTCACAAGATGTCTTATGATGCCTTTGATAGATTCAGAGGTAAAGATGGGA 547
|||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 509 AGCTATACGGTCATAAGATGTCTTGTGATGCCTTTGATAGATTCAGAGGTAATGATGGGA 568
Query 548 GGTTCAAGGAGAGTCTAGCCACAGATGTTAGAGGAATGCTACAGTTGTTCCA-GTTCGCG 606
|||||||||||||||||| || |||| ||||||||||||||||||||||| | ||| |||
Sbjct 569 GGTTCAAGGAGAGTCTAGTCAGAGATTTTAGAGGAATGCTACAGTTGTTCGAAGTT-GCG 627
Query 607 CATCTCGGAACACCCTCTGAAGATATAATGGACGAAGCAATGAGTTTCGCGCGGAATCAC 666
|||||||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||
Sbjct 628 CATCTCGGAACACCCTGTGAAGTTATAATGGACGAAGCACTGAGTTTCACGCGGAATCAC 687
Query 667 TTGGAGTCTTGGATAGGTGGTAAC 690
|||||||||| || | ||||||||
Sbjct 688 TTGGAGTCTTTGACAAGTGGTAAC 711
Score = 425 bits (230), Expect = 3e-118
Identities = 310/349 (89%), Gaps = 4/349 (1%)
Strand=Plus/Plus
Query 691 TACTGGTGGCAAGAGAATATATATCTTAATTACTACGAACAAGAAGGAGGTCACAATGAG 750
|||| |||||||||||||||||||| ||||||||||||||||| ||||||| | |||
Sbjct 788 TACTAGTGGCAAGAGAATATATATC----TTACTACGAACAAGAAGAAGGTCACGACGAG 843
Query 751 ATCCTGCTCAAGTTTGCAAAGCTTAACTTCAACTTTTGCCAGTTTCATTACATCCAAGAA 810
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 844 ATCCTGCTCAAGTTTGCGAAGCTTAACTTCAACTTTTGCCAGTTTCATTACGTCCAAGAA 903
Query 811 CTCAAAACTCTCACCAAATGGTGGAAGGACTTAGATCTTGTATCTAAGTTACCTTACATT 870
|||||||| |||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct 904 CTCAAAACGCTCACCAAATGGTGGAGGGACTTAGATCTTGCATCTAAACTACCTTACATT 963
Query 871 AGGGATAGACTTGTGGAGTGCCATTTCGCGTCTCTGGGAACGTATTTTGAGCCACAATAT 930
|||||||||||||| ||| ||||| ||| | |||||||| |||| || |||||||| |||
Sbjct 964 AGGGATAGACTTGTAGAGAGCCATCTCGTGGCTCTGGGACCGTACTTCGAGCCACACTAT 1023
Query 931 TCCCTTGGGAGAATAATATTGGCTAAAATCATGATGATTGTGGTTGTTGTGGATGACACA 990
|| ||||| || || ||| |||||||||||| ||||| |||||||||||||||| |||
Sbjct 1024 TCTCTTGGAAGGATCATAGTGGCTAAAATCAACATGATCATGGTTGTTGTGGATGATACA 1083
Query 991 TATGATGCATATGCAACTCTTCCCGAAGTTACCGCTCTTACGGAATGTT 1039
||||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct 1084 TATGACGCATATGCAACCCTTCCCCAAGTTAAAGCTCTTACGGAATGTT 1132
> AT3G14540.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr3:4881439-4883936 REVERSE
LENGTH=1984
Length=1984
Score = 732 bits (396), Expect = 0.0
Identities = 566/645 (88%), Gaps = 24/645 (4%)
Strand=Plus/Plus
Query 61 AACCTCTCTCTCTTTCCT---CGTTTGCTTCAC-AGCCACACT-TTTTCTTGGAAGCCCG 115
|||||||||||| ||||| ||||||||| || || |||| | ||| | | ||| || |
Sbjct 58 AACCTCTCTCTCATTCCTCAGCGTTTGCTTGACAAG-CACAATCTTTCCCT-GAAACCGG 115
Query 116 -CAA-A-ACACGACTT-GT-TCGTTGTAAGGTCTACTAAGAGTAATGATGATCTTGAGAG 170
|| | |||| |||| || | | |||||||||||||||||||| ||||||||||||||
Sbjct 116 TAAAGATACACCACTTGGTAT-G-TGTAAGGTCTACTAAGAGTAGTGATGATCTTGAGAC 173
Query 171 TAGTCGTCCTTTGACGCAATTTTCTCCCTCTCTTTGGGGAGATCAC-TTCTTCTCTGTTT 229
||||||||||| |||| | |||||||| |||||||||||||||||| ||| |||||||||
Sbjct 174 TAGTCGTCCTTCGACGTACTTTTCTCCTTCTCTTTGGGGAGATCACTTTC-TCTCTGTTT 232
Query 230 CCCTCGA-TAGCGCTGAATTT-TATGAACTAGAAAGAGAGATTAAAACTACCAAGCCACT 287
||||||| | |||||||||| | ||||||||||||||||||| |||||| ||||| ||
Sbjct 233 CCCTCGACCA-CGCTGAATTTGT-TGAACTAGAAAGAGAGATTGAAACTATGAAGCCGCT 290
Query 288 GGTGAGAGACATGCTCATGTCTTCTCACAGCAGCGACAAGGAGAAGATTCGTTTCATCCA 347
||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 291 GGTGAAAGACATGCTCATGTCTTCTCAAAGCAGCGACAAGGAGAAGATTCGTCTCATCCA 350
Query 348 TTTGCTTGTCAGCATGGGGATCTCTTATCATTTTGATAAGGACATTCAAGAGATCCTTAA 407
|||||| || ||| | |||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct 351 TTTGCTCGTTAGCCTCGGGAGCTCTTATCATTTTGATAAGGAGATTCAAGATATCCTTAA 410
Query 408 CCACAGTTTTACAAAGTTGGAAGACATAATAGACAAGGAAAATGATTTGGAAACAATCTC 467
|||||||| ||||||||||| | |||||||| ||||| |||||||||||||||||||
Sbjct 411 ACACAGTTTCACAAAGTTGGATGGCATAATAGTTGAGGAAGATGATTTGGAAACAATCTC 470
Query 468 CATTATGTTTGAGGTCTTTAGGCTATACGGTCACAAGATGTCTTATGATGCCTTTGATAG 527
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 471 CATTATGTTTGAGGTCTTTAGGCTATACGGTCATAAGATGTCTTGTGATGCCTTTGATAG 530
Query 528 ATTCAGAGGTAAAGATGGGAGGTTCAAGGAGAGTCTAGCCACAGATGTTAGAGGAATGCT 587
|||||||||| |||||||||||| || ||||||||||| | ||||||||||||||||||
Sbjct 531 ATTCAGAGGTGGAGATGGGAGGTTTAAAGAGAGTCTAGCTAAAGATGTTAGAGGAATGCT 590
Query 588 ACAGTTGTTCCA-GTTCGCGCATCTCGGAACACCCTCTGAAGATATAATGGACGAAGCAA 646
|||||||||| | || ||||||||| ||||||| |||||||||||||||||| ||||||
Sbjct 591 ACAGTTGTTCGAAGT-CGCGCATCTAGGAACACTCTCTGAAGATATAATGGATGAAGCAT 649
Query 647 TGAG-TTTCGCGCGGAATCACTTGGAGTCTTGGATAGGTGGTAAC 690
|||| ||| ||||||||||||||||||||| || | ||||||||
Sbjct 650 TGAGGTTTA-CGCGGAATCACTTGGAGTCTTTGACAAGTGGTAAC 693
Score = 387 bits (209), Expect = 2e-106
Identities = 302/347 (87%), Gaps = 6/347 (2%)
Strand=Plus/Plus
Query 691 TACTGGTGGCAAGAGAATATATATCTTAATTACTACGAACAAGAAGGAGGTCACAATGAG 750
|||| || ||||||||||||||||| ||||||||||||||||| |||| |||| |||
Sbjct 770 TACTAGTAGCAAGAGAATATATATC----TTACTACGAACAAGAAGAAGGTTACAACGAG 825
Query 751 ATCCTGCTCAAGTTTGCAAAGCTTAACTTCAACTTTTGCCAGTTTCATTACATCCAAGAA 810
|||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 826 ATCCTGCTAAAGTTTGCAAAACTTAACTTCAACTTTTGCCAGTGTCATTACATCCAAGAA 885
Query 811 CTCAAAACTCTCACCAAATGGTGGAAGGACTTAGATCTTGTATCTAAGTTACCTTACATT 870
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 886 ATCAAAACTCTCACCAAATGGTGGAAGGACTTAGATCTTGCATCTAAACTACCTTACATT 945
Query 871 AGGGATAGA-CTTGTGGAGTGCCATTTCGCGTCTCTGGGAACGTATTTTGAGCCACAATA 929
||||||||| || || ||| ||||| ||| | ||||||| |||| || |||||||| ||
Sbjct 946 AGGGATAGATCT-GTAGAGAGCCATCTCGGGGGTCTGGGACCGTACTTCGAGCCACAGTA 1004
Query 930 TTCCCTTGGGAGAATAATATTGGCTAAAATCATGATGATTGTGGTTGTTGTGGATGACAC 989
||| |||||||| || ||| ||||||| | ||| ||||| | ||||||| |||||||||
Sbjct 1005 TTCTCTTGGGAGGATCATAGTGGCTAAGACCATCATGATAATCGTTGTTGCGGATGACAC 1064
Query 990 ATATGATGCATATGCAACTCTTCCCGAAGTTACCGCTCTTACGGAAT 1036
|||||||||| |||||||| | ||||||| ||| | |||||||||||
Sbjct 1065 ATATGATGCACATGCAACTATACCCGAAGCTACGGTTCTTACGGAAT 1111
> AT3G14490.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr3:4863631-4865949 REVERSE
LENGTH=1806
Length=1806
Score = 418 bits (226), Expect = 5e-116
Identities = 508/641 (79%), Gaps = 32/641 (5%)
Strand=Plus/Plus
Query 58 ACAAACCTCTCTCTCTTTCCT---CGTTTGCTTCAC-AGCCACACT-TTTTCTTGGAAGC 112
||||||| |||||| |||||| |||| ||||||| || |||||| ||| ||| ||| |
Sbjct 55 ACAAACCCCTCTCTTTTTCCTCGGCGTTGGCTTCACAAG-CACACTCTTTCCTT-GAAAC 112
Query 113 CCGC--AA-AACACGACTTGTTCGT-TGTAAGGTCTACTAAGAGTAATGATGATCTTGAG 168
| || || ||||| ||||| || | || ||| ||||| ||||||||||| |||||||
Sbjct 113 CGGCAAAACAACACCACTTGGTC-TGCGTTAGGGCTACTGAGAGTAATGATAATCTTGAA 171
Query 169 AGTAGTCGTCCTTTGACGCAATTTTCTCCCTCTCTTTGGGGAGATCACTT-CTTCTCTGT 227
||||||||||| ||| | || ||||||||| ||||||||||||||||||| ||| |||||
Sbjct 172 AGTAGTCGTCCCTTGGCACACTTTTCTCCCACTCTTTGGGGAGATCACTTCCTT-TCTGT 230
Query 228 TTCCCTCGATAG-CGCTGAATTTTATGAACTAGAAAGAGAGATT-AA--AACTACCAAGC 283
| ||||| || | |||||||||| |||| | |||||||||| || || | ||||
Sbjct 231 TCCCCTCCAT-GTCGCTGAATTTGATGATTTCTCAAGAGAGATTGAAGTGACGATGAAGC 289
Query 284 CACTGGTGAGAGACATGCTCATGTCTTCTC-ACAGCAGCGACAAGGAGAAGATTCGTTTC 342
|| |||||||||||||||| |||||| | | | ||||||||| |||| ||| ||| ||
Sbjct 290 CAAAAGTGAGAGACATGCTCAAGTCTTC-CAAAAACAGCGACAATGAGAGGATCCGTCTC 348
Query 343 ATCCATTTGCTTGTCAGCATGGGGATCTCTTATCATTTTGATAAGGACATTCAAGAGATC 402
||||||||||| | | | | || ||| | |||||||| || | || ||| | |||||
Sbjct 349 ATCCATTTGCTAATGAACCTCGGAATCGCATATCATTTCGAGATTGAGATTGATGAGATT 408
Query 403 CTTAACCACAG-TTTTACAAAGTTGGAAGACATAATAGACAAGGAAAATGATTTGGAAAC 461
||| ||| || |||| || ||||| || ||||||| |||||||||||||||||||||
Sbjct 409 CTTGGCCA-AGCTTTTGGGAATTTGGACGATATAATAGCCAAGGAAAATGATTTGGAAAC 467
Query 462 AATCTCCATTATGTTTGAGGTCTTT-AGGCTATACGGTCACAAGATGTCTTA-TGATGCC 519
|||||||| ||||||||||| ||| || ||| |||| || | ||| ||| | ||||
Sbjct 468 AATCTCCACCATGTTTGAGGT-TTTCAGACTACGCGGTTACTATATGCCTTGCT-ATGCA 525
Query 520 TTTGATAGATTCAGAGGTAAAGATGGGAGGTTCAAGGAGAGTCTAGCCACAG-ATGTTAG 578
|| ||||||||| |||| ||||||||||||||||||| |||||||| || || ||||
Sbjct 526 TTCAATAGATTCAAAGGTGAAGATGGGAGGTTCAAGGAAAGTCTAGCTG-AGGATATTAG 584
Query 579 AGGAATGCTACAGTTGTTCCA-GTTCGCGCATCTCGGAACACCCTCTGAAGATATAATGG 637
||||||||||||||||| | | | || |||||||| ||||| ||||||||||| ||||
Sbjct 585 AGGAATGCTACAGTTGTACGAAGCA-GCACATCTCGGGACACCATCTGAAGATATTATGG 643
Query 638 ACGAAGCAATGAGTTTCGCGCGGAATCACTTGGAGTC-TTG 677
|||||||| |||| ||| | ||| ||| ||| ||||| |||
Sbjct 644 ACGAAGCATTGAGCTTCACTCGGTATCGCTTAGAGTCGTTG 684
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51037893352
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5