BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg341904
Length=2262
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gat... 3280 0.0
AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleot... 1814 0.0
> AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gated
channel 19 | chr3:6045002-6048488 FORWARD LENGTH=2719
Length=2719
Score = 3280 bits (1776), Expect = 0.0
Identities = 2059/2196 (94%), Gaps = 18/2196 (1%)
Strand=Plus/Plus
Query 64 GCTCACACTAGGGCTTTTACTTCCAGGAACCGTAGTGTTTCTCTCTCAAACCCAACTTTC 123
|||||||||||| |||| |||||||| |||||||| |||||||||||||||||| |||||
Sbjct 384 GCTCACACTAGGACTTTCACTTCCAGAAACCGTAGCGTTTCTCTCTCAAACCCATCTTTC 443
Query 124 TCCTTTGACGGATTTGACAGCTCGAGTGTGGTTTTAGGTTACACAGGTCCTCTTCGAACC 183
||| ||||||||||||||| ||| | |||| |||||| ||||| |||||||||||||||
Sbjct 444 TCCATTGACGGATTTGACAACTCAACTGTGACTTTAGGCTACACGGGTCCTCTTCGAACC 503
Query 184 CAGCGAATAAGACCTCCTTTAGTGCAAATGAGTGGTCCTCTTCACTCTACTCGCAGAACA 243
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 504 CAGAGAATAAGACCTCCTTTAGTGCAAATGAGTGGTCCTATTCACTCTACTCGCAGAACA 563
Query 244 GAAcctctcttctctccttctcctcaagaacctcctgattcctcctcctcctctACCGTT 303
|||||||||||||||||||||||||||||| ||||||| | |||| || |||||||||
Sbjct 564 GAACCTCTCTTCTCTCCTTCTCCTCAAGAATCTCCTGA-T--TCCT-CT--TCTACCGTT 617
Query 304 AATGTTCCACCTGAAGATGATTTTGTCTTCCAAAACGCAAATCTCTTGAGATCTGGACAG 363
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 618 GATGTTCCACCTGAAGATGATTTCGTCTTCAAAAACGCAAATCTCTTGAGATCTGGACAA 677
Query 364 TTAGGGATGTGCAATGATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAAGCT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 TTAGGGATGTGCAATGATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAAGCT 737
Query 424 GCTCAATTTCACACTTCCAGAGTTTCTACCTCTAGGTTTCGCACTGTTCTGTATGATGAT 483
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 738 GCTCAATTGCACACTTCCAGAGTTTCTGCCTCTAGGTTTCGCACTGTTCTGTATGGTGAT 797
Query 484 GCTAGAGGTTGGGCTAAGCGATTTGCCTCCTCTGTTCGTAGATGCTTACCTGGAATAATG 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 798 GCTAGAGGTTGGGCTAAGCGATTTGCCTCCTCTGTTCGTAGATGCTTACCCGGAATAATG 857
Query 544 AATCCTCATTCCAAATTCGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAGTG 603
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 858 AATCCTCATTCCAAATTTGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAGTG 917
Query 604 GCCATTTTTATAGATCCTCTCTTCTTGTTCCTCTTATTTATCCAACAAGACAACAAATGC 663
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 918 GCCATTTTTATAGACCCTCTCTTCTTTTTCCTCTTATTGATCCAACAAGACAACAAATGC 977
Query 664 TTAGCGATTGATTGGCGTGCGACTAAAGTATTGGTGTCTCTTAGAAGTATAACGGATCTT 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 ATAGCGATTGATTGGCGTGCGACTAAAGTATTGGTGTCTCTTAGAAGTATAACGGATCTT 1037
Query 724 GTATTCTACATTAACATTCTACTTCAGTTTAGGTTGGCCTATGTAGCCCCTGAATCTAGA 783
|||||| |||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 1038 ATATTCTTCATTAACATTCTGCTTCAGTTTAGGTTGGCCTATGTAGCTCCTGAGTCTAGA 1097
Query 784 ATAGTTGGTGCCGGCCAGTTAGTTGATCATCCAAGAAAAATTGCTCGCCATTACTTCCAA 843
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1098 ATAGTTGGTGCCGGCCAGTTAGTTGATCATCCAAGAAAAATTGCTCGCCATTACTTCCGA 1157
Query 844 GGAAAGTTTTTTCTTGATC-TGTTCATAGTGTTACCCATTCCACAGATAATGATATTATG 902
||||||||| | ||||| | |||||||||| || |||||||||||||||||||||||| |
Sbjct 1158 GGAAAGTTTCTCCTTGA-CATGTTCATAGTCTTTCCCATTCCACAGATAATGATATTAAG 1216
Query 903 GATAATACCAGCACACTTGGGCACACGCAGGGAAGAATATGAGAAACAGATTATACGCGC 962
|||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1217 GATAATACCATTACACTTAGGCACACGCAGGGAAGAATCTGAGAAACAGATTTTACGCGC 1276
Query 963 TACGGTTCTTTTTCAATACATTCCAAAGTTATATAGACTCTTACCTCTTCTTGCTGGACA 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 TACGGTTCTTTTTCAATACATTCCAAAGTTATATAGACTCTTACCTCTTCTTGCTGGACA 1336
Query 1023 AACACCGACCGGCTTCATATTTGAGTCAGCCTGGGCTAATTTTGTTATTAATCTTCTCAC 1082
|||| | || |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1337 AACATCTACTGGCTTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATTAATCTTCTCAC 1396
Query 1083 CTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCTTTCTGGTCTGCAGAGAGT 1142
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1397 CTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCTCTCTGCTCTGCAGAGAGT 1456
Query 1143 TAAGAAATGCATGCTGAATGCTTGGAATATTTCTGTGGATGAACGTAGAAATCTTATCGA 1202
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1457 TAAGAAATGCATGCTGAATGCTTGGAATATTTCTGCGGATGAACGTAGAAATCTTATCGA 1516
Query 1203 TTGTTCGCGTGGAAGTTATGCATCCGA-GTCACAACGAGCTCTCTGGAGAGATGGTGCTA 1261
|||| | ||||||||||||||||| || ||||||||||| ||| ||||||||| |||||
Sbjct 1517 TTGTGCTCGTGGAAGTTATGCATC-GAAGTCACAACGAGATCTGTGGAGAGATAATGCTA 1575
Query 1262 GTGTCAATGCTTGTTTTCAAGAGAGTGGTTTTACTTATGGGATCTATCTGAAGGCAGTGA 1321
|||||||||||||||||||||| | ||||| ||| |||||||||||| ||||||||||||
Sbjct 1576 GTGTCAATGCTTGTTTTCAAGAAAATGGTTATACCTATGGGATCTATTTGAAGGCAGTGA 1635
Query 1322 ATCTTACCAATCAATCTAGTTTCTTCACAAGATACAGTTATTCTCTGTTTTGGGGATTCC 1381
||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1636 ATCTTACCAATGAATCTAGTTTCTTCACAAGATTCAGTTATTCTCTGTATTGGGGATTCC 1695
Query 1382 AACAAATAAGCACACTTGCTGGAAACTTATCCCCAAGTTACTCAGTGGGGGAGGTTTTCT 1441
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1696 AACAAATAAGCACACTTGCTGGAAACTTATCCCCAAGTTACTCAGTGGGTGAGGTTTTCT 1755
Query 1442 TTACAATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGTGCGGCTTATCGGTAATATGC 1501
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1756 TTACAATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGCGCGGCTTATCGGTAACATGC 1815
Query 1502 AGAACTTCCTTCAATCTCTTGATCGGAGGAGGATGGAAATGATGCTGAGACGGCGTGATG 1561
| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||
Sbjct 1816 ACAACTTCCTTCAATCACTTGATCGAAGGAGGATGGAAATGATGCTGAGAAAGCGTGATG 1875
Query 1562 TAGAGCAGTGGATGAGCCATAGACTGTT-GCCAGAAGATATAAGAAAAAGAGTGCGCGAG 1620
| |||||||||||||||||||||| ||| |||||||||||||||||| || ||| | |||
Sbjct 1876 TGGAGCAGTGGATGAGCCATAGAC-GTTTGCCAGAAGATATAAGAAAGAGGGTGAGAGAG 1934
Query 1621 GCTGAGCGGTACAATTGGGCTGCGACTAGAGGAGTTAACGAAGAATTTCTATTCGAGAAT 1680
| ||||||||||| |||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1935 GTTGAGCGGTACACTTGGGCTGCGACAAGAGGAGTTAACGAAGAATTGCTATTTGAGAAC 1994
Query 1681 ATGCCTGATGACCTTCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAGAAGGTG 1740
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1995 ATGCCTGATGACCTTCAAAGAGATATAAGAAGACACCTCTTCAAATTTCTCAAGAAGGTG 2054
Query 1741 AGAATATTTTCGTTGATGGATGAATCAGTTTTAGATTCAATCCGTGAGAGGTTGAAACAG 1800
|||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||
Sbjct 2055 AGAATATTTTCGTTGATGGATGAATCAGTTTTAGATTCAATCAGAGAGAGGCTGAAACAG 2114
Query 1801 AGGACATACATAAGGTGTAGCACGGTGTTGCACCGCAGAGGTCTAGTAGAAAAAATGGTA 1860
||||| ||||||||| |||||||||||||||| | ||||||||||||||| |||||||||
Sbjct 2115 AGGACTTACATAAGGAGTAGCACGGTGTTGCATCACAGAGGTCTAGTAGAGAAAATGGTA 2174
Query 1861 TTCATAGTGAGAGGTGAGATGGAGAGTATTGGAGAAGACGGTTCTATTCTTCCTTTATCA 1920
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 2175 TTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTCCTTTATCA 2234
Query 1921 GAAGGCGACGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCTATAAAC 1980
||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 2235 GAAGGAGACGTTTGTGGTGAAGAACTTCTCACTTGGTGCCTC------TCTTCTATAAAC 2288
Query 1981 CCCGATGGGACTAAGATAAAGATGCCAACAAAGGGATTAGTTAGCAACAGAAATGTTAGG 2040
||||||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2289 CCCGATGGGACGAGGATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTAGG 2348
Query 2041 TGTGTAACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCAGATCTTGAAGATGTAACAAGC 2100
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2349 TGTGTGACAAACGTGGAGGCGTTTTCGCTGAGTGTAGCAGATCTTGAAGATGTAACAAGC 2408
Query 2101 TTGTTTTCAAGATTCTTAAGGAGTCATCGAGTGCAAGGAGCTATAAGGTACGAGTCTCCT 2160
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 2409 TTGTTTTCAAGATTCTTAAGAAGCCATCGAGTGCAAGGAGCTATAAGGTACGAGTCTCCT 2468
Query 2161 TATTGGAGACTACAAGCAGCGATGCAGATTCAAGTGGCTTGGAGATACCGAAAGAGACGA 2220
|||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||| |
Sbjct 2469 TATTGGAGGTTACGAGCAGCTATGCAGATCCAAGTGGCTTGGAGATACCGAAAGAGACAA 2528
Query 2221 CTTCAGAGATTTTACACTGCTCAGTCTAGTTCCAAC 2256
|| |||||||| |||||||||| || | |||||||
Sbjct 2529 CTCCAGAGATTAAACACTGCTCACTCCAATTCCAAC 2564
> AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleotide-binding
transporter 1 | chr3:6048916-6052552 FORWARD LENGTH=2556
Length=2556
Score = 1814 bits (982), Expect = 0.0
Identities = 1659/1977 (84%), Gaps = 82/1977 (4%)
Strand=Plus/Plus
Query 319 GATGATTTTGTCTTCCAAA-ACGCAAATCTCTTGAGATCTGGACAGTTAGGG-ATGTGCA 376
||||| || || || ||| |||||||||||||||| |||||||| || ||| ||||| |
Sbjct 504 GATGAGTTCGT-TTTGAAACACGCAAATCTCTTGAGGTCTGGACAATT-GGGAATGTGTA 561
Query 377 ATGATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAA-GCTGCTCAATTTCAC 435
||||||||||||| |||||||||||||||||||||||||| || ||||||||| || |
Sbjct 562 ATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCG-TAAGGCTGCTCAA-ATCCC 619
Query 436 -ACTTCCAGAGTTTCT-ACC-TCTAGGTT--TCG---C---ACTGTTCTGTATGATGATG 484
||||| ||||||||| || | | | || || | || | ||||||||||||||
Sbjct 620 TACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAAC-GCTCTGTATGATGATG 678
Query 485 CTAGAGGTTGGGCTAA-GCGATTTGCCTCCTCTGTTCGTAGATGCTTACCTGGAATAATG 543
||| ||||||||| || | ||||||| ||||||||| ||||| |||||||||||| |||
Sbjct 679 CTAAAGGTTGGGC-AAGGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATG 737
Query 544 AATCCTCATTCCAAATTCGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAG-T 602
||||||||| ||||| |||||| |||||||| | |||| ||| ||||| |||| | |
Sbjct 738 AATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTT-GTT 796
Query 603 GGCCATTTTTATAGATCCTCTCTTCTTGTTCCTCTTATTTA-TCCAACAAG-ACAACAAA 660
|| |||||||||||||| |||||||| |||||| || | ||||| || | ||||||
Sbjct 797 AGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATA-AAAGTCCAA-GAGCAAAACAAA 854
Query 661 TG-CTTAGCGATTGATTGG-CGTGCGACTAAAGTATTGGT-GTCTCTTAGAAGTATAACG 717
|| ||| |||||||||| || |||||||| ||| || | || | |||||| ||||
Sbjct 855 TGTATTA-TGATTGATTGGCCG-ATGACTAAAGCATTTGTAG-CTGTAAGAAGTGTAACA 911
Query 718 GATCTTGTATTCTAC-ATTAACATTCTACTTCAGTTTAGGTTGGCCTATGTAGCCCCTGA 776
||| || ||||| || || ||||||||||||||||| | |||||||||||||| | |||
Sbjct 912 GATGTTATATTC-ACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTGA 970
Query 777 ATCTA-GAATAGTTGGTGCCGGCCAGTTAGTTGA-TCAT-CCAAGAAAAATTGCTCGCCA 833
|||| | ||||||| || |||||||||||| | |||| |||| ||||||||| | ||
Sbjct 971 GTCTACG-GTAGTTGGAGCTGGCCAGTTAGTT-AGTCATCCCAA-AAAAATTGCCCTTCA 1027
Query 834 TTACTTCCAAGGAAAGTTTTTTCTTGATC-TGTTCATAGTGTTACCCA-TTCCACAGATA 891
|||| || ||||||||||||| ||||| | ||||||||||| | ||| |||||||||||
Sbjct 1028 TTACCTCAAAGGAAAGTTTTTCCTTGA-CTTGTTCATAGTGAT-GCCACTTCCACAGATA 1085
Query 892 ATGATATTATGGATAATACCAGCACACTTGGGCACA-CGCAGGG-AAGAATATGAGAAAC 949
||||| ||||||||||||||||||| ||||| || | | ||| || | |||| ||||
Sbjct 1086 TTGATACTATGGATAATACCAGCACATTTGGGTGCATC-CGGGGCAA-ACTATGCGAAAA 1143
Query 950 AGATTATACGCGCTACGGTTCTTTTTCAATACATTCCAAAGTTATATAGAC-TCTTACC- 1007
| || |||| ||| | |||||||| ||||||||||||||||||||||||| || ||||
Sbjct 1144 ACCTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTC-TACCG 1202
Query 1008 TCTTCTTGCTGGACAAACACCGACCGGCTTCATATTTGAGTCAGCCTGGGCTAATTTTGT 1067
| ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1203 T-TTCTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGT 1261
Query 1068 TATTAATCTTCTCACCTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCT-TT 1126
||||||||||||||| |||||||||||||| || | |||||| |||||||||||||| ||
Sbjct 1262 TATTAATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATT 1321
Query 1127 CTGGTCTGCAGAGAGTTAAGAAATGCATGCTG-AATGCTT--GGAATATTTCTGTGG-AT 1182
|||||||||||||||||| | ||| | | | ||||||| || | |||| || || |
Sbjct 1322 -TGGTCTGCAGAGAGTTAATCAGTGCCTTC-GAAATGCTTGCGGTA-ATTT-TG-GGCGT 1376
Query 1183 GAACGTAGAA-ATCTTATCGATTGTTCG-CGTGGAAGTTATGCATCCG-AGTCACAACGA 1239
||| || || ||||||| ||||| | | ||||| || ||| | | | | ||||
Sbjct 1377 GAATGT-CAAGATCTTATAGATTG-TGGTAATGGAA-ATA-GCA-GTGTA-TTAGTACGA 1430
Query 1240 GCT-CTCTGGAGAGATGGTGCTAGTGTCAATGCTTGTTTTCAAG-AGAGTGGTTTTACTT 1297
||| | ||||| |||| ||| |||| |||||||||||| |||| ||| ||||||| |||
Sbjct 1431 GCTAC-CTGGAAAGATAATGCGAGTGCCAATGCTTGTTTCCAAGAAGA-TGGTTTTCCTT 1488
Query 1298 ATGGGATCTATCTGAAGGCAGTGAATCTTACCAATCAATCTAGTTTCTTCACAAGATACA 1357
|||| |||||| | || ||||| |||||||||||||| |||| | |||||||||||||||
Sbjct 1489 ATGGAATCTATTTAAAAGCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATACA 1548
Query 1358 GTTATTCTCTGTTTTGGGGATTCCAACAAATAAGCACACTTGCTGGAAACTTA-TCCCCA 1416
|||| ||||| || ||||| ||||| ||||| ||||| |||||||| ||| | | ||||
Sbjct 1549 GTTACTCTCTCTTCTGGGGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGT-CCCA 1607
Query 1417 AGTTACTCAGTGGGGGAGGTTTTCTTTACAATGGGTATCATTGGACTAGGGCTTTTGCTT 1476
|| |||| | |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 1608 AGCTACTTTCTAGGGGAGGTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTACTT 1667
Query 1477 TTTGTGCGGCTTATCGGTAATATGCAGAACTTCCTTCAATCTCTTGATCGGAGGAGGATG 1536
|||| || ||||| ||||||||||| || ||||||||| |||||| | |||| ||
Sbjct 1668 TTTGCGCTTCTTATTGGTAATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTG 1727
Query 1537 GAAATGATGCTGAGACGGCGTGATGTAGAGCAGTGGATGAGCCATAGACTGTTGCCAGAA 1596
||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||
Sbjct 1728 GAAATGACGCTGAGACGGCGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAGAT 1787
Query 1597 GATATAAGAAAAAGAGTGCGCGAGGCTGAGCGGTACAATTGGGCTGCGACTAGAGGAGTT 1656
| |||||||| || ||||| ||||||||||||| || |||||||| |||||||| |||
Sbjct 1788 GGTATAAGAAGGAGGGTGCGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCGTT 1847
Query 1657 AACGAAGAATTTCTATTCGAGAATATGCCTGATGACCTTCAAAGAGATATAAGACGACAC 1716
||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1848 AACGAAGAATTGCTTTTTGAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGACAC 1907
Query 1717 CTCTTTAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAATCAGTTTTAGAT 1776
||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct 1908 CTCTTCAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGAT 1967
Query 1777 TCAATCCGTGAGAGGTTGAAACAGAGGACATACATAAGGTGTAGCACGGTGTTGCACCGC 1836
|||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||
Sbjct 1968 GCAATCCGTGAGAGGCTGAAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACCGT 2027
Query 1837 AGAGGTCTAGTAGAAAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGTATTGGAGAA 1896
|||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2028 GGAGGACTAGTTGAGAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAA 2087
Query 1897 GACGGTTCTATTCTTCCTTTATCA-GAAGGCGACGTTTGTGGTGAAGAACTCCTCACTTG 1955
|| |||||| ||||||| |||| | |||||||| ||||||||||||||||||||||||||
Sbjct 2088 GATGGTTCTGTTCTTCCATTAT-ATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACTTG 2146
Query 1956 GTGCCTCGAACGCTCTTCTATAAACCCCGATGGGACTAAGATAAAGATGCCAACAAAGGG 2015
||||||||||||||||||| |||||||||||||||| | ||||| ||||||| |||||||
Sbjct 2147 GTGCCTCGAACGCTCTTCTGTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGG 2206
Query 2016 ATTAG-TTAGCAACAGAAATGTTAGGTGTGTAACAAATGTGGAGGCGTTTTCGCTGAGTG 2074
||| | |||| | ||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 2207 ATT-GCTTAGTAGCAGAAATGTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAGTG 2265
Query 2075 TAGCAGATCTTGAAGATGTAACAAGCTTGTTTTCAAGATTCTTAAGGAGTCATCGAGTGC 2134
|||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||||| |||| |
Sbjct 2266 TAGCCGATCTGGAAGACGTAACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGTCC 2325
Query 2135 AAGGAGCTATAAGGTACGAGTCTCCTTATTGGAGACTACAAGCAGCGATGCAGATTCAAG 2194
||||||| ||||||||||| ||||| |||||||| |||| ||| || | |||||||||||
Sbjct 2326 AAGGAGCCATAAGGTACGACTCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCAAG 2385
Query 2195 TGGCTTGGAGATACCGAAAGAGACGACTTCAGAGATTTTACACTGCTCAGTCTAGTT 2251
|||| ||||||||||| | |||||| ||||| ||||| | |||| ||||||||||||
Sbjct 2386 TGGCGTGGAGATACCGTAGGAGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTT 2442
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112248418620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5