BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg342410
Length=972
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22720.1 | Symbols: | F-box and associated interaction doma... 850 0.0
AT3G22700.1 | Symbols: | F-box and associated interaction doma... 671 0.0
AT3G22350.1 | Symbols: | F-box and associated interaction doma... 472 4e-132
AT2G04920.1 | Symbols: | F-box and associated interaction doma... 394 9e-109
AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8... 357 1e-97
AT3G44120.1 | Symbols: | F-box and associated interaction doma... 54.7 2e-06
> AT3G22720.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8028961-8030097 REVERSE LENGTH=1137
Length=1137
Score = 850 bits (460), Expect = 0.0
Identities = 595/658 (90%), Gaps = 17/658 (3%)
Strand=Plus/Plus
Query 10 GATATTCCTTTAGATTTGGTAGAGGAAATACTATCTAGGGTTCCAGCCACATCTTTCAAA 69
||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||
Sbjct 7 GATCTTCCTTTAGATTTGGTAGAGAAAATACTCTCTAGGGTTCCCGCCACATCTCTCAAA 66
Query 70 CGATTACGATCGACTTGCAGACGATGGAACGCTCTATTGAAAGACCCAAGATTCACCGAG 129
||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct 67 CGACTACGATCGACTTGTAGACGATGGAACGCTTTATTGAAAGACCGAAGATTCACCGAG 126
Query 130 AAGCACTTTCTTAAAGCACCAAAGGAGTCTATG-GTTCTCATGTTGAAAGAGTATAGGGT 188
|| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 127 AAACACTTTCATAAAGCACCAAAGGAGTCTA-GAGTTCTCATGTTGAAAGAGTATAGGGT 185
Query 189 TTGTCCAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTCAAGGTGCACT 248
|| ||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||
Sbjct 186 TTTTCCAATAAGCGTCAATCTCAAAGTTACTCCTCCATCTGTAGACTTTAAAGGTGCACT 245
Query 249 TGGCCTAAATGATTCTCATTCTAATTTAGAACAAGTCAAGATAACCGAAGTTTTTCACTG 308
||| | | |||| |||||||||| |||||||||| |||||||||||||||||||||
Sbjct 246 TGG--T---T-ATTCCCATTCTAATTCAGAACAAGTCGTGATAACCGAAGTTTTTCACTG 299
Query 309 CAATGGTTTGTTGTTATGCACCACCAAGGACAATACACTCTTGGTTTGGAATCCGTGTTT 368
| ||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||
Sbjct 300 CGATGGTTTGTTGTTATGCACCACCAATGACGATAGACTCGTGGTTTGGAATCCGTGTTT 359
Query 369 GGGGGAAACCAAGTGGATCCAACTCAAAGTAGATTACGGGAGAAACGGCTCCA-AGTTTT 427
|||||||||||| ||||||||||||||||| |||||| ||||| ||| ||||| | |||
Sbjct 360 GGGGGAAACCAAATGGATCCAACTCAAAGTTGATTACCGGAGATACGTCTCCATA-TTTG 418
Query 428 CTCTAGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGAGTTGGT 487
||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct 419 CTCTAGGGTATATCCAAAACAACGAATCCTGCCGTAGCTATAAAATCTTGTGGACTTGGT 478
Query 488 ATAGTTATGATTACAAATCATCACCGCCCCAAATAGTTTTGGGGTTTGAAATATACGAGT 547
||||||| |||||||| ||||||||||| |||| || |||||||||||||||||||||||
Sbjct 479 ATAGTTACGATTACAATTCATCACCGCCACAAAGAGGTTTGGGGTTTGAAATATACGAGT 538
Query 548 TTAGTTCTGATTCAT---GGAGGGTTCTTGATGACGTCAATCATGACTCCTTAC-TCAAT 603
|||| |||||||||| ||||||||||||||||||||||||| |||||| | | |||||
Sbjct 539 TTAGCTCTGATTCATCATGGAGGGTTCTTGATGACGTCAATCACGACTCCGT-CGTCAAT 597
Query 604 CACAACTCCATAATAGGAACTGGCGTGTCTCTGAAGGGAAATACTTACT-TGCTTGCT 660
||||||||||||||| ||| |||||||||| |||||||||||||||| | ||||||||
Sbjct 598 CACAACTCCATAATAAGAAGTGGCGTGTCTTTGAAGGGAAATACTTA-TATGCTTGCT 654
Score = 364 bits (197), Expect = 7e-100
Identities = 272/305 (89%), Gaps = 17/305 (6%)
Strand=Plus/Plus
Query 672 AGAGAGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGT-AACTTGGATCTAT 730
|||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct 705 AGAGCGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTGAAAT-GGATCTAT 763
Query 731 CAGTTGTTAGAGAAGAACAACTCGCAGTATTGAATTGGAGCCGTACTACATCAAAGATGG 790
| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 764 C--T-GTTAGAGAAGAACAACTCTCAGTATTGAATTGGAGCCGTATTACATCAAAGATGG 820
Query 791 AGATATGGATAACCAATAACATTGATACTGATGCTACATTGTTGTGGA---GACTACACT 847
|||||||||||||||||||| |||||||||| |||||||||||||||| || | ||||
Sbjct 821 AGATATGGATAACCAATAACTTTGATACTGAAGCTACATTGTTGTGGAAAAGAGTGCACT 880
Query 848 TAGACACTCGCTGTAATTGTGTTCGAATCTTCTCAAGTCTATTAAT-CGACGAGGAGGAG 906
|||||| || ||||||||||||||||||||||||||||||| | | |||||||||| |
Sbjct 881 TAGACAGTCAATGTAATTGTGTTCGAATCTTCTCAAGTCTAT-ATTTCGACGAGGAG-A- 937
Query 907 AAGAAAGTCGTCTTGTGTTGTAATGTTAATGATGATGAGACTAGCAAGAACA-TGGATAT 965
| |||||||||||||| |||||||||||| |||| |||||| |||||||| | ||| |||
Sbjct 938 A-GAAAGTCGTCTTGTATTGTAATGTTAAAGATGGTGAGACCAGCAAGAA-AGTGG-TAT 994
Query 966 TACAT 970
||||
Sbjct 995 -ACAT 998
> AT3G22700.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8024798-8025814 REVERSE LENGTH=1017
Length=1017
Score = 671 bits (363), Expect = 0.0
Identities = 563/654 (86%), Gaps = 36/654 (6%)
Strand=Plus/Plus
Query 14 TTCCTTTAGATTTGGTAGAGGAAATACTATCTAGGGTTCCAGCCACATCTTTCAAACGAT 73
||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 11 TTCCTTTGGATTTGGTAGAGGAAATACTCTCTAGGGTTCCAGCCACATCTCTCAAACGAT 70
Query 74 TACGATCGACTTGCAGACGATGGAACGCTCTATTGAAAGACCCAAGATTCACCGAGAAGC 133
||||||||||||| |||| |||||||||| |||||||||||| ||||||||| |||||||
Sbjct 71 TACGATCGACTTGTAGACAATGGAACGCTTTATTGAAAGACCGAAGATTCACAGAGAAGC 130
Query 134 ACTTTCTTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGTATAGGGTTTGTC 193
|||||| ||||||||||||||||||| | |||||||||||| || || |
Sbjct 131 ACTTTCGTAAAGCACCAAAGGAGTCTCTAGTTCTCATGTTG-AA-AG---A--------- 176
Query 194 CAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTCAAGGTGCACTTGGCC 253
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 177 -AATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAGATGCACTTGGCT 235
Query 254 TAAATGATTCTCATTCTAATTTAGAACAAGTCAAGATA-ACCGAAGTTTTTCACTGCAAT 312
|||| ||||| |||||||||| ||||||||| | ||| || ||||| |||||||| ||
Sbjct 236 TAAAGGATTCCCATTCTAATTCAGAACAAGTTGATATAGTCC-AAGTTCTTCACTGCGAT 294
Query 313 GGTTTGTTGTTATGCACCACCAAGGACAATACACTCTTGGTTTGGAATCCGTGTTTGGGG 372
||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct 295 GGTTTGTTGTTATGCACCACCAAGGACAATAGACACGTGGTTTGGAATCCGTGTTTGGGG 354
Query 373 GAAACCAAGTGGATCCAACTCAAAGTAGATTACGGGAGAAACGGCTCCAAG-TTTTCTCT 431
|||||| | ||||||||| ||||||| |||||||||||| | |||| || ||| ||||
Sbjct 355 GAAACCCATTGGATCCAATTCAAAGTTGATTACGGGAGAGTCTACTCC-AGCTTTGCTCT 413
Query 432 AGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGAGTTGGTATAG 491
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct 414 AGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGAGGTGGAAAAG 473
Query 492 TTATGATTACAAATCATCACCGCCCCAAATAGTTTTGGGGTTTGAAATATACGAGTTTAG 551
| | ||||||||||||||||||| |||| || || |||||||||||||||||||
Sbjct 474 TAACGATTACAAATCATCACCGCGTCAAAGAG----GG--TTTGAAATATACGAGTTTA- 526
Query 552 T-TCTGATTCATGGAGGGTTCTTGATGACGTCAATCATGACTCCTTACTCAATCACAACT 610
| |||||| |||||||||| |||||||||||||||| ||||| || ||||||||||||
Sbjct 527 TCTCTGATAAATGGAGGGTTATTGATGACGTCAATCACGACTCTTTGGTCAATCACAACT 586
Query 611 CCATAATAGGAA----CTG--GCGTGTCTCTGAAGGGAAATACTTACTTGCTTG 658
|| ||||| ||| |||||||| |||||||||||| ||||| |||||
Sbjct 587 --ATT-TAGGACGTTGCTGTCGCGTGTCTTTGAAGGGAAATATTTACTGGCTTG 637
Score = 372 bits (201), Expect = 4e-102
Identities = 276/309 (89%), Gaps = 17/309 (6%)
Strand=Plus/Plus
Query 672 AGAGAGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTAACTTGGATCTATC 731
||||||||| |||||||||||||||||||||||| || |||||||| || ||| | ||||
Sbjct 690 AGAGAGATTTAAACGTCTATGCCTTCCGCATTTCGAAAATGTTGGTCACATGGTTTTATC 749
Query 732 AGTTGTTAGAGAAGAACAACTCGCAGTATTGA-ATTGGAGCCGTACTACATCAAAGATGG 790
| |||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||
Sbjct 750 ATTTGTTAGAGAAGAACAACTCTCAGTATT-ATATTGGAGCCGTGCTACACCAAAGATGG 808
Query 791 AGATATGGATAACCAATAACATTGATACTGATGCTACATTGTTGTGGAGACTACACTTAG 850
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 809 AGATATGGATAACCAATAACATTGATACTGATGCTACATTGTTGTGGAGACTGCACTTAG 868
Query 851 ACACTCGCTGTAATTGTGTTCGAATCTTCTCAAGTCTATTAATCGACGAGGAGGAGAAGA 910
||||||||| ||||||||||||||||||||||||||| | | | ||||||||||||||
Sbjct 869 ACACTCGCTTTAATTGTGTTCGAATCTTCTCAAGTCTCT-ATTT--CGAGGAGGAGAAGA 925
Query 911 AAGTCGTCTTGTGTTGTAATGTTAA-T-G--A-TGATGA---GA-CTAGCAAGAACATGG 961
||||||||||||||||||||||||| | | | |||||| || | |||||||||||||
Sbjct 926 AAGTCGTCTTGTGTTGTAATGTTAAATTGTTAATGATGATAAGATC-AGCAAGAACATGG 984
Query 962 ATATTACAT 970
||| ||||
Sbjct 985 -TAT-ACAT 991
> AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7901905-7903041 FORWARD LENGTH=1137
Length=1137
Score = 472 bits (255), Expect = 4e-132
Identities = 486/594 (82%), Gaps = 30/594 (5%)
Strand=Plus/Plus
Query 4 ATGTTTGATATTCCTTTAGATTTGGTAGAGGAAATACTATCTAGGGTTCCAGCCACATCT 63
|||| |||| ||||||| ||||||||||| |||||||| || |||||| | |||||||||
Sbjct 1 ATGTCTGATCTTCCTTTGGATTTGGTAGAAGAAATACTCTCAAGGGTTTCGGCCACATCT 60
Query 64 TTCAAACGATTACGATCGACTTGCAGACGATGGAACGCTCTATTGAAAGACCCAAGATTC 123
| |||||||||||||| ||||||| || ||||||| || |||| ||| | | ||| |||
Sbjct 61 CTGAAACGATTACGATCTACTTGCAAACAATGGAACACTTTATTCAAAAAACGAAGTTTC 120
Query 124 A-CCGAGAAGCACTTTCTTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGTA 182
| || |||| ||||||| || ||| ||||||||||||||||||||||||||||| |||||
Sbjct 121 AGCC-AGAAACACTTTCATATAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGTA 179
Query 183 TAGGGTTTGTC-CAAT-AAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTCAA 240
|| ||||| | |||| || |||||||||| ||| ||||||||||| |||||||||||
Sbjct 180 CAGAGTTTG-CTCAATGAA-TATCAATCTCAATGTTTCTCCTCCATCTGTAGAGTTTCAA 237
Query 241 GGTGCACTTGGCCT--AA-ATGATTCTCATTCTAATTTAGAACAAGTCAAGATAACCGAA 297
||| |||||||| | || ||||||| ||||||||||||| ||||||| ||||| ||||
Sbjct 238 GGTACACTTGGCATAAAAGATGATTCCCATTCTAATTTAGGACAAGTCGAGATAGTCGAA 297
Query 298 GTTTTTCACTGCAATGGTTTGTTGTTATGCACCACCAAGGACAATACACTCTTGGTTTGG 357
|||| |||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||
Sbjct 298 GTTTATCACTGTGATGGTTTGTTGTTATGCGCCACCAGGGACAATAGACTCGTGGTTTGG 357
Query 358 AATCCGTGTTTGGGGGAAACCAAGTGGATCCAACTCAAAG-TAGATTACGGGAGAAACGG 416
|||||||||||||||||||||| ||||||||||||||||| | || | | ||||| ||
Sbjct 358 AATCCGTGTTTGGGGGAAACCAGGTGGATCCAACTCAAAGAT-GAATGCAGGAGATACT- 415
Query 417 CTCCAAGTTTTCTCTAGGATATATCCAAAACAACGAATCTTG-C--CGTAGCTACAAAAT 473
|| | |||| |||||||||| | |||||||| ||| ||| | |||| |||||||||
Sbjct 416 CTAC--GTTTGCTCTAGGATA---CGAAAACAACAAATTTTGTCGTCGTAACTACAAAAT 470
Query 474 CTTGTGG-AGTTGGTATAG-TT--ATGATTACAAATCATCACCGCCC-CAAATAGTTTTG 528
|||| || | |||| | | || | ||| ||| | || || | | | | ||||
Sbjct 471 CTTGAGGTA-TTGGGGTTGGTTTCACGATCACATACCAG-AC-GACGGCGGAC-GTTTCA 526
Query 529 GGGTTTGAAATATACGAGTTTAGTTCTGATTCATGGAGGGTTCTTGATGACGTC 582
|| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||
Sbjct 527 GG-TTTGAAATATATGACTTTAGATCTGATTCATGGAAGGTTCTTGATGACGTC 579
> AT2G04920.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:1726138-1727268 FORWARD LENGTH=1131
Length=1131
Score = 394 bits (213), Expect = 9e-109
Identities = 382/462 (83%), Gaps = 18/462 (4%)
Strand=Plus/Plus
Query 22 GATTTGGTAGAGGAAATACTATCTAGGGTTCCAGCCACATCTTTCAAACGATTACGATCG 81
|||||||| || || ||||| |||||||| |||||||||||| | ||||||||||| |
Sbjct 19 GATTTGGTGGAAGACATACTCTCTAGGGTCCCAGCCACATCTCTGAAACGATTACGGTTT 78
Query 82 ACTTGCAGACGATGGAACGCTCTATTGAAAGACCCAAGATTCACCGAGAAGCACTTTCT- 140
||||||| || ||||||| || |||| ||| ||| ||||||||| |||||||||||| |
Sbjct 79 ACTTGCAAACAATGGAACTCTTTATTCAAAAACCGAAGATTCACAGAGAAGCACTTT-TG 137
Query 141 TAAAGCACCAAAGGAGTCT-ATGGTTCTCATGTTGAAAGAGTATAGGGTTTGTCCAATAA 199
|||||| |||||| ||||| || |||||| | | ||| || |||| |||||||||||| |
Sbjct 138 TAAAGCTCCAAAGCAGTCTCAT-GTTCTCTTATGGAAGGATTATACGGTTTGTCCAATGA 196
Query 200 GCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTCAAG-GTGCACTTGGCCTAAAT 258
|| ||||||||||| || || | | |||||||||||| ||| ||| |||| |||||||
Sbjct 197 GCATCAATCTCAACTTTTCTGGTTCGTCTATAGAGTTT-AAGAGTGTACTTAGCCTAAAG 255
Query 259 GATTCTCATTCTAATTTAGAACAAGTCAAGATAACCGAAGTTTTTCACTGCAATGGTTTG 318
||||| |||| ||||| |||||||||| | ||| || |||||||||||||| ||||||||
Sbjct 256 GATTCACATTATAATTCAGAACAAGTCTATATAGCCAAAGTTTTTCACTGCGATGGTTTG 315
Query 319 TTGTTATGCACCACCAAGGA-CAATACACTCTTGGTTTGGAATCCGTGTTTGGGGGAAAC 377
|||||||||||||||||||| || || |||||| ||||||||||||||||||||||||||
Sbjct 316 TTGTTATGCACCACCAAGGATCA-TAGACTCTTAGTTTGGAATCCGTGTTTGGGGGAAAC 374
Query 378 CAAGTGGATCCAACTC--AAAGTAGATTACGGGAGAAACGGCTCCAAGTTTTCTCTAGGA 435
|| ||||||| |||| ||| | |||||| | | | || | |||||||||||||
Sbjct 375 CAGGTGGATC-AACTTTGAAAAT-GATTACAAGCCATATT-CT--AGGTTTTCTCTAGGA 429
Query 436 TATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTG 477
|| | |||| ||| |||| |||||||||||||||||||||
Sbjct 430 TACA---AAAATAACAAATCATGCCGTAGCTACAAAATCTTG 468
> AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8027274
REVERSE LENGTH=981
Length=981
Score = 357 bits (193), Expect = 1e-97
Identities = 276/312 (88%), Gaps = 22/312 (7%)
Strand=Plus/Plus
Query 672 AGAGAGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTAACT-TGGATCTAT 730
||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||
Sbjct 516 AGAGAGATTCAAACGTCTACGCCTTCCGCATTTCCAAGATGTTGGTAA-TATGGATCTAT 574
Query 731 CAGTTGTTAGAGAAGAACAACTCGCAGTATTGA-ATTGGAGC-CGTACTACATCAAAGAT 788
||||||||||||||||||||||| || |||| | |||||| | |||| ||||||||||||
Sbjct 575 CAGTTGTTAGAGAAGAACAACTCTCAATATT-ACATTGGA-CTCGTAATACATCAAAGAT 632
Query 789 GGAGATATGGATAACCAATAACATTGATACTGATGCTACATTGTTGTGGAGACTACACTT 848
|||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 633 GGAGATTTGGATAACTAATAACATTGATACTGATGCTACATTGTTGTGGAGACTGCACTT 692
Query 849 AGACACTC--G-CT------GTAATTGTGTTCGAATCTTCTCAAGTCTAT-TAATCGACG 898
| |||||| | || |||||||||||||| ||||||||||||||| || |||||
Sbjct 693 ACACACTCAAGTCTTCTCACGTAATTGTGTTCGAGTCTTCTCAAGTCTATATA-TCGAC- 750
Query 899 AGGAGGAGAAGAAAGTCGTCTTGTGTTGTAATGTTAATGATGATGAGACTAGCAAGAACA 958
| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 751 A--AGGAGAAGAAAGTTGTCTTGTGTTGTAATGTTAATGATGATGCGACCAGCAAGAACA 808
Query 959 TGGATATTACAT 970
| | ||| ||||
Sbjct 809 TAG-TAT-ACAT 818
Score = 322 bits (174), Expect = 4e-87
Identities = 225/249 (90%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 336 GGACAATACACTCTTGGTTTGGAATCCGTGTTTGGGGGAAACCAAGTGGATCCAACTCAA 395
|||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198 GGACAAAAGACTCGTGGTTTGGAATCCGTGTTTGGGGGAAACCAAGTGGATCCAACTCAA 257
Query 396 AGTAGATTACGGGAGAAACGGCTCCAAGTTTTCTCTAGGATATATCCAAAACAACGAATC 455
||| |||||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||
Sbjct 258 AGTTGATTACCGGAGATACGTCTCCAAGTTTTGTCTAGGGTATATCCAAAACAACGAATC 317
Query 456 TTGCCGTAGCTACAAAATCTTGTGGAGTTGGTATAGTTATGATTACAAATCATCACCGCC 515
| |||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||
Sbjct 318 TCGCCGTAGCTATAAAATCTTGCGGAGTTGGTATAGTTACGATGACAAATCATCACCGCG 377
Query 516 CCAAATAGTTTTGGGGTTTGAAATATACGAGTTTAGT-TCTGATTC---ATGGAGGGTTC 571
||||| || |||||||||||||||||||||||||| | |||||||| |||||| ||||
Sbjct 378 CCAAAGAGATTTGGGGTTTGAAATATACGAGTTTA-TCTCTGATTCGTCATGGAGAGTTC 436
Query 572 TTGATGACG 580
|| ||||||
Sbjct 437 TTAATGACG 445
Score = 195 bits (105), Expect = 9e-49
Identities = 150/172 (87%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 21 AGATTTGGTAGAGGAAATACTATCTAGGGTTCCAGCCACATCT-TTCAAACGATTACGAT 79
||||||||| ||||||||||| ||||||||||| || |||||| | ||| | |||||||
Sbjct 24 AGATTTGGTCGAGGAAATACTTTCTAGGGTTCCGGCGACATCTGTGAAAAAG-TTACGAT 82
Query 80 CGACTTGCAGACGATGGAACGCTCTATTGAAAGACCCAAGATTCACCGAGAAGCACTTTC 139
| ||||||| || |||||||||| |||| ||||| ||||||||| ||||||||||||
Sbjct 83 CTACTTGCACACAATGGAACGCTATATTCAAAGATGAAAGATTCACTGAGAAGCACTTTA 142
Query 140 TTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGTATAGGGTTTG 191
|||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 143 GTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGCATAGGGTTTG 194
> AT3G44120.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:15878399-15879817 REVERSE LENGTH=1419
Length=1419
Score = 54.7 bits (29), Expect = 2e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 901 GAGGAGAAGAAAGTCGTCTTGTGTTGTAA 929
|||||||||||||||||||||||||||||
Sbjct 997 GAGGAGAAGAAAGTCGTCTTGTGTTGTAA 1025
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47571737209
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5