BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg342623 Length=1329 Score E Sequences producing significant alignments: (Bits) Value AT3G24580.1 | Symbols: | F-box and associated interaction doma... 1303 0.0 AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | ch... 555 5e-157 AT3G23420.1 | Symbols: | F-box and associated interaction doma... 357 2e-97 AT3G22770.1 | Symbols: | F-box associated ubiquitination effec... 333 3e-90 AT5G28527.1 | Symbols: | pseudogene, hypothetical protein | ch... 279 3e-74 AT5G36730.1 | Symbols: | F-box and associated interaction doma... 143 5e-33 AT5G36820.1 | Symbols: | F-box and associated interaction doma... 143 5e-33 > AT3G24580.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8969162-8970298 FORWARD LENGTH=1137 Length=1137 Score = 1303 bits (705), Expect = 0.0 Identities = 1006/1146 (88%), Gaps = 41/1146 (4%) Strand=Plus/Plus Query 1 ATGACTAAGATATCTAATCTTCCTAAGGATTTGGTGGAGGAGGTGCTCTCTAGGGTTCCG 60 ||||| ||||| |||||||| ||||| ||||||| ||| |||||||||||||||||| || Sbjct 1 ATGACGAAGATGTCTAATCTCCCTAATGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTCG 60 Query 61 TTAACATCTTTAAGAAATATCCGA-TTAACTTGCAAAAAGTGGAACATTTTATCCAAAGG 119 ||||||||| | ||||| ||||| || ||||| ||| | ||||| | |||||| ||||| Sbjct 61 TTAACATCTCTGAGAAACGTCCGACTT-ACTTGTAAAGATTGGAATACTTTATCTAAAGG 119 Query 120 TGAGAGCTTTGCAAAGAAGCACCTTGGTGATCAAGCAAAAGAAGCAGC-AACGGAAAGAG 178 |||||||||||||||||| ||||||||| ||||||||| || |||||| || ||||| || Sbjct 120 TGAGAGCTTTGCAAAGAATCACCTTGGTTATCAAGCAATAGTAGCAGCGAA-GGAAAAAG 178 Query 179 AGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGAGTCAATC-TTCAC 237 |||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||| Sbjct 179 AGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTCAC 237 Query 238 AATGACGTTGAGTCATGTATAAAGCCTGAAGGTGAACTTATTTGCTTAGACGAAGAAGAC 297 |||||| ||||||| ||||| |||||||||||||| |||||| |||| | ||| |||| | Sbjct 238 AATGACATTGAGTCGTGTATTAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGATGAAGTC 297 Query 298 GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATTATGGAAGATAAC--- 354 |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| Sbjct 298 GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGATAACGAA 357 Query 355 ----A--CT-AGGATTGTGGTTTGGAACCCGTATTGGGGGCATAC-CTGGTGGATCGTGC 406 | || ||| | || |||||||||||||||||||||| || | ||||||||| | Sbjct 358 GATAACGCTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACAC-GGTGGATCGAGT 415 Query 407 CTACACATAATTTCCACAAATTGGACGTTTATACGTATGCTCTTGGATACAAGCAGAGCA 466 ||||| |||||||||||||||||||| | |||||||||||||| ||||||||| |||||| Sbjct 416 CTACAAATAATTTCCACAAATTGGACATGTATACGTATGCTCTCGGATACAAGAAGAGCA 475 Query 467 GCAAATCATGTCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCGCACTTGTTTTG 526 |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 476 GCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCCCACTTGTTCTG 535 Query 527 AATTCAAAATCTACAATATAAACTCTGATTCATGGAAGGTTCTTGATGTCTCTCCAGATT 586 | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct 536 AGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTTGATGTGTCTCCAGACT 595 Query 587 GGAAGATAGATTCTTATAGTCGTGGCGTGTCTCTCAAGGGAAATACGTACTGGTTTGCTA 646 |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| Sbjct 596 GGAAGATAGATTCTTATATTCGTGGCGTGTCTCTCAAGGGAAATACATACTGGATTGCTA 655 Query 647 GAGAGAGGCAAGGA-A--G-CAGTACTTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGA 702 |||||||||| ||| | | || ||||||||||||||||||||||||||||||||||||| Sbjct 656 GAGAGAGGCACGGATACGGCCA-TACTTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGA 714 Query 703 TTTAGATCACGTTTTCCTCTGCCGATTCAGCCGTATATTTTAGATACCGTGAGTCTATCT 762 ||||| || ||||| |||||||||| |||||||| | ||||||||||||||||||||||| Sbjct 715 TTTAGGTCGCGTTTACCTCTGCCGAGTCAGCCGTGTGTTTTAGATACCGTGAGTCTATCT 774 Query 763 AGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTCAGCGCTCAAGATTATCAGAGATGGAG 822 |||||||||||||||||||| || |||||||||||| ||||||| | | || ||||| Sbjct 775 AGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTTCAGTGCTCAAG-T-A-CAT---TGGAG 828 Query 823 ATGGAGATCTGGATAACCACGAAACTTGAGCCCAACGCGGTGTCGTGGAACAGCAAGGTG 882 ||| |||||||| |||| || ||| |||||||||| ||||||| |||||||||||||||| Sbjct 829 ATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGTTGTGGAACAGCAAGGTG 888 Query 883 TTCTTAGCAATGGATATTGG-C-C--TTCAA-TTTCAGTTTCAAGTTAGAGCTGCAAGTT 937 |||||||| ||||||| | | | || || ||||||||||||||||||||| | |||| Sbjct 889 TTCTTAGCTGTGGATAT-GCACTCACTT-AAGTTTCAGTTTCAAGTTAGAGCTTCGAGTT 946 Query 938 TCTTTATCGATGAGGAGAAGAAAGTTGTTGTGGTTTTTGATAAAGAGAAAAAAT-ATTTA 996 |||||||||| |||||||||| ||||||||| |||||||||||||| |||| | ||||| Sbjct 947 TCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAAGA-AAAACGTTATTTA 1005 Query 997 GTGTCCACTCACAACATAGCTTACATCTTTGGAGAGGATGGAACCTTGGAACAAGTGGAT 1056 | |||| ||| ||||| |||||||||| |||||| ||||||||||| |||||||||||| Sbjct 1006 GCGTCCTCTCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCTGGGAACAAGTGGAC 1065 Query 1057 CTTGGATTATCTGCAGACAAATTTTGTT-ATCCACTTGTGTGCTGTTATGTTCCAAGTTT 1115 |||||| | |||| |||||||||| ||| | ||||||||||||| ||||||||||||||| Sbjct 1066 CTTGGAATGTCTGTAGACAAATTT-GTTTACCCACTTGTGTGCTCTTATGTTCCAAGTTT 1124 Query 1116 AGTGCA 1121 |||||| Sbjct 1125 AGTGCA 1130 > AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | chr3:9184970-9186171 FORWARD LENGTH=1202 Length=1202 Score = 555 bits (300), Expect = 5e-157 Identities = 902/1176 (77%), Gaps = 107/1176 (9%) Strand=Plus/Plus Query 1 ATGACTAAGATATCTAATCTTCCTAA-GGATTTGGTGGAGGAGGTGCTCTCTAGGGTTCC 59 |||||||||||||| |||||||| || |||||||| ||| |||||||||| ||| |||| Sbjct 42 ATGACTAAGATATCCAATCTTCC-AAGGGATTTGGCGGAAGAGGTGCTCTGTAGAATTCC 100 Query 60 GTTAACATCTTTAAGAAATATCCGAT-TAACTTGCAAAAAGTGGAACATTTTATCCAAAG 118 ||| || ||| | |||| | | ||| | ||||||||| |||||||| ||||||||| Sbjct 101 GTTGACGTCTCTGAGAACTGTTTGATCT-TCTTGCAAAACGTGGAACACGTTATCCAAAT 159 Query 119 GTGAGAGCTTTGCAAAGAAGCACCTTGGTGATCAAGCAAAAGAAGCAGCAACGGAAAGAG 178 ||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||| Sbjct 160 ATGAGAGCTTTGCAAAGAAGTACCTTGGTGATCAAGCAAAATTAGCTGCAAAGGAAAGAG 219 Query 179 AGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGAGTCAATCTTCACA 238 |||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||| | Sbjct 220 AGTTTATGATGGTCGTGATGATGAATTTTAGGGTTTAATTGATGAGAGTCAATCTTCAAA 279 Query 239 ATGACGTTG-A--GTCATGTATAAAGCCTGAAGGTGAACTTATTTGCTTAGACGAAGAAG 295 | | |||| | ||||||||||| | ||||| | |||||||| | |||| ||| |||| Sbjct 280 ACAAGGTTGAATCATCATGTATAAAACGTGAAGCTAAACTTATTAGTTTAGGCGATGAAG 339 Query 296 ACGATGTATCTCAAGTCTTTCACTGCGACGGTTTATTG---TT-AT--GCATTATGGAAG 349 ||| |||||||||||||||||||| ||||||||||| || || |||| | ||| Sbjct 340 TTGATATATCTCAAGTCTTTCACTGCAACGGTTTATTGTTATTCATCAGCATCACCAAAG 399 Query 350 ATAACACTAGGATTGTGGTTTGGAACCCG--T-ATTGGGGGCATACCTGGT-GGATCGTG 405 | || |||||| | ||||||||||||||| | ||||||| |||||| || ||||| Sbjct 400 ACAAGACTAGGCTAGTGGTTTGGAACCCGTATGATTGGGGACATACC-CGTACGATCGAA 458 Query 406 CCTACACATAATTTCCACAAATT--GGACGT-T--TATACGTATGCTCTTGGATACAAGC 460 || |||||||| | ||||| ||| | || | |||| ||||||||| |||||||| | Sbjct 459 CCCACACATAACTGCCACATATTCAATAGGTATAATATATGTATGCTCTCGGATACAA-C 517 Query 461 -AGAGC-AGCAAATCATGTCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCGCAC 518 ||||| |||| | | || | | ||||||||||||| ||| || | || || | | Sbjct 518 AAGAGCTAGCAGCT-A-ATC-C--C-ACAAAATCTTGAGGTTTGTT-A-CTTACT-GGA- 567 Query 519 T---TGTT-T---TGAATTCAAAATCTACAATATAAACTCTGATTCATGGAAGGTTCTTG 571 | ||| | ||| |||| ||||||| || | |||||||||||||||| |||||||| Sbjct 568 TGAGGGTTATGGATGAGTTCATAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTG 627 Query 572 ATGTCTCTCCAGATTGGAAGAT-AGATTCTTAT-AGTCGTGGCGTGTCTCTCAAGGGAAA 629 ||||| |||||||||||| ||| || || ||| | | ||||||||||||||||||||| Sbjct 628 ATGTCACTCCAGATTGGACGATAAG-TT-ATATGAACCTTGGCGTGTCTCTCAAGGGAAA 685 Query 630 TACGTACTGGTTTGCTA--GAGAG--A---GGCAA-GGAAGCAGTACTTTCTTAGTCTGT 681 | | ||||||||||||| ||||| | | || || | | || ||||||||||||| Sbjct 686 TGCATACTGGTTTGCTACTGAGAGATATTCCGAAACAGACG-ATTA-TTTCTTAGTCTGT 743 Query 682 TTTGATTTCACAAGAGAGAGATTTAGATCACGTTTT-CCTCTGCCGATTCAG-CCG-TAT 738 ||||||||||||||||||| |||| | | | |||| |||| ||| || | | || Sbjct 744 TTTGATTTCACAAGAGAGACATTTGGGCCTC-TTTTGACTCTTCCGTTTGTGTTTGTTAA 802 Query 739 AT-TTTAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTCA 797 || | |||| || || |||||| |||||||||||||||||| |||||||||| ||| Sbjct 803 ATCTGAAGATGTTATGTGTGTATCTAATGTTAGAGAAGAGCAGCTTGCGGTTTTATATCA 862 Query 798 G-CGCTCAAGATTATCAGAGATGGAGATGGAGATCTGGATAAC--C-ACGAAACTTGAGC 853 | || | || || | | | |||||||||||||||| || | ||| | |||||| Sbjct 863 GCCG-T-GGGA-TA--A-ATA-AAAGATGGAGATCTGGATTACGTCTACG--A-TTGAGC 912 Query 854 CCAACGCGGTGTCGTGGAACAGCAAGGTGTTCTTAGCAATG-G-ATA-------T--T-G 901 ||||||||||||||||||||||||||||||||||| || || | ||| | | | Sbjct 913 CCAACGCGGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAAAACTCATTG 972 Query 902 GCCTTCAATTTCAGTTTCAAGTTAGAGCTGCAAGTTTCTTTATCGATGAGGAGAAGAAAG 961 ||| || ||||||||| ||| | | | | ||||||| || || ||||||||||||| Sbjct 973 GCCCTCCGTTTCAGTTTT--GTTTGGG--G-A-GTTTCTTCATTGACGAGGAGAAGAAAG 1026 Query 962 TTGTTGTGGTTTTTGATAAAGAGAAAAAATATTTAGTGTCCAC-T--C--ACAACATAGC 1016 | | |||||||||||||||||| | ||| || || | | || | | ||| ||| | Sbjct 1027 TCGCTGTGGTTTTTGATAAAGACTACAAAGATA-AGCG-CAACATAGCTTACATCATTGG 1084 Query 1017 TTACATCTTTGGAGAGGATGGAACCTTGGAACAAGTGGATCTTGGATTATCTGCAGACA- 1075 | | |||||||| |||||| |||| || ||| |||||| ||| ||| || || Sbjct 1085 --AGA-CTTTGGAGTCGATGGATCCTTTAAAGAAG-GGATCTCGGAGAATCAGCCTACGC 1140 Query 1076 AATTTTGTTATCCACTTGTGTGCTGTTATGTTCCAA 1111 ||| | |||| |||||| |||||| ||||||||||| Sbjct 1141 AATGT-GTTACCCACTTATGTGCTCTTATGTTCCAA 1175 > AT3G23420.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8386273-8387324 REVERSE LENGTH=858 Length=858 Score = 357 bits (193), Expect = 2e-97 Identities = 360/439 (82%), Gaps = 18/439 (4%) Strand=Plus/Plus Query 32 TGGTGGAGGAGGTGCTCTCTAGGGTTCCGTTAACATCTTTAAGAAATA-TCCGATTAACT 90 ||| |||||||||||| |||||||||||| | |||||| |||| || | ||||||| ||| Sbjct 2 TGGCGGAGGAGGTGCTTTCTAGGGTTCCGATGACATCTCTAAG-AAGACTCCGATTTACT 60 Query 91 TGCAAAAAGTGGAACATTTTATCCAAAGGTGA-GAGCTTTGCAAAGAAGCACCTTG-GTG 148 |||||||||||||||| |||||| | | || | ||||||||||||||||||||||| || Sbjct 61 TGCAAAAAGTGGAACACTTTATCTAGATGT-AGGAGCTTTGCAAAGAAGCACCTTGTTTG 119 Query 149 ATCAAGCAAAAGAAGCAGCAACGGAAAGAGAGTTTATGATGGTCATGATGATGGATTTTA 208 ||||||||||| ||| |||| | ||||||||| || | ||||||||||||||||||||| Sbjct 120 -TCAAGCAAAAGTAGCTGCAAAGAAAAGAGAGTATAAGGTGGTCATGATGATGGATTTTA 178 Query 209 GGGTTTATTTGATGCG-AGTCAATCTTCACAATGACGTTGAGTCATGTATAAAGCCTGAA 267 |||||||||||||||| | | |||||||| || ||||||| | |||||||||| |||| Sbjct 179 GGGTTTATTTGATGCGCA-TAAATCTTCAGAACAACGTTGAATTGTGTATAAAGCGTGAA 237 Query 268 GGTGAACTTATTTGCTTAGACGAAGAAGA-CGA-TGTA--TC--TCAAGTCTTTCACTGC 321 |||||||| ||| | |||| ||| | | | || || ||| |||||||||||| Sbjct 238 CGTGAACTTCTTTTCCCCGACGCTTCAGATCAAATTTACGTCCGTCACGTCTTTCACTGC 297 Query 322 GACGGTTTATTGTTATGCATTATGGAAGATAACACTAGGATTGTGGTTTGGAACCCGTAT 381 |||||||||||||||||||| ||| |||| ||| ||||| |||||||||| ||||||||| Sbjct 298 GACGGTTTATTGTTATGCATCATGAAAGACAACCCTAGGCTTGTGGTTTGTAACCCGTAT 357 Query 382 TGGGGGCATACCTGGTGGATCGTGCCTACACATAATTTCCACA-A-ATTGGACGTTTATA 439 | || || ||| ||||||||| | ||||| ||||| || || | ||| || | ||| Sbjct 358 AGTGGACAAACCCGGTGGATCGAGACTACAAATAAT--CCTCAGAGATTAGATGCATATT 415 Query 440 CGTATGCTCTTGGATACAA 458 |||||||||| |||||||| Sbjct 416 CGTATGCTCTCGGATACAA 434 > AT3G22770.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:8047684-8048667 REVERSE LENGTH=984 Length=984 Score = 333 bits (180), Expect = 3e-90 Identities = 703/937 (75%), Gaps = 110/937 (12%) Strand=Plus/Plus Query 250 TCATGTATAAAGCCTGAAGGTGAACTTATTTGCTTA---GACGAAGAAGACGATGTATCT 306 ||||||||||| | ||||| | || ||||| ||||| ||||||| || ||| ||||| Sbjct 91 TCATGTATAAAACGTGAAGCTAAAGTTATTAGCTTAGGCGACGAAGTTGATGATATATCT 150 Query 307 CAAGTCTTTCACTGCGACGGTTTATTGTTATGCAT-----T-ATGGAAGATAACACTAGG 360 ||||||||||||||||||||||||||||||||||| | | ||| || |||||| Sbjct 151 CAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCAGCATCACCCAAGCCAAGACTAGG 210 Query 361 ATTGTGGTTTGGAACCCGTATTGGGGGCATACCTGGTGGATCGTGCCTACACATAATTTC 420 | |||||||||||||||||||||||||||||| ||| |||| ||| |||||| | ||| Sbjct 211 CTCGTGGTTTGGAACCCGTATTGGGGGCATACCCGGTCAATCGAGCCCACACATCAGTTC 270 Query 421 CACAAATTGGAC-GTTTATACGTATGCTCTTGGATACAAGCA-GAGCAGCAAATCATGTC 478 ||||||| ||| | | || | |||||||| |||||| | || |||||||||||| | Sbjct 271 AACAAATTCGACAGCT-ATTCTTATGCTCTCGGATACGA-CAAGAGCAGCAAATC----C 324 Query 479 GCAGCTACAAAATCTTGAGATTTATTGA-TT-TTTCTCG-CACT-TGTTT--TGAATTCA 532 || | | ||| ||||||| | |||| | || ||| | | | | ||| ||| |||| Sbjct 325 -CA-C-A-AAA-TCTTGAGGTGTATT-ACTTGTTTGA-GACCCCAT-TTTCATGAGTTCA 376 Query 533 AAATCTACAATATAAACTCTGATTCATGGAAGGTTCTTGATGTCTCTCCAGATTGGAAGA 592 ||||||| || | |||||| ||||||||| |||| || ||||| ||||||| ||| | | Sbjct 377 TAATCTACGATTTTAACTCTAATTCATGGAGGGTTTTTCATGTCACTCCAGACTGGCA-A 435 Query 593 T-AG--ATTCTTATAGTCGTGGCGTGTCTCTCAAGGGAAATACGTACTGGTTTGCT-A-G 647 | || | | ||| | | ||||||||||||||||||||||| | | |||| ||||| | | Sbjct 436 TTAGGGACTATTA-A-TAGTGGCGTGTCTCTCAAGGGAAATGCCTTCTGGGTTGCTGAAG 493 Query 648 AGA-G-AG---G---CAAG-GAAGCA---GTAC--TTT--CTTAGTCTGTTTTGATTTCA 691 ||| | | | |||| ||| || | | ||| |||| ||| ||||||||||| Sbjct 494 AGAAGTATTACGAAACAAGTGAAACAAACGAAGAGTTTTTCTTACTCTCTTTTGATTTCA 553 Query 692 CAAGAGAGAGATTTAGATCACGTTTT-CCTCTGCCGATTCAGCC-GTAT-ATTTT-A-GA 746 ||||||||| |||| || ||| |||| ||||| ||| ||||| || | | | | | || Sbjct 554 CAAGAGAGACATTTGGACCAC-TTTTGCCTCTTCCGTTTCAGTTTGT-TGAATCTGAAGA 611 Query 747 TACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTCAGC-GCTCAA 805 | | ||||| |||| | ||||||||| |||||||| || ||||||| ||||| | | Sbjct 612 TGCTTTGAGTGTATCCAATGTTAGAGACGAGCAGCTTGCTGTTTTATATCAGCCG-TGG- 669 Query 806 GATTATCAG-AGATGGAGATGGAGATCTGGATAACCACGAA-ACTTGAGCCCAACGCGGT 863 ||| | || | ||| | ||||||||||| | || | || | |||||||||||||||| Sbjct 670 GAT-A-CATTA-ATG-A--TGGAGATCTGGGTCACGTCTAAGA-TTGAGCCCAACGCGGT 722 Query 864 GTCGTGGAACAGCAAGGTGTTCTTAGCAATG-G-ATA-------T--T-GGCCTTCAATT 911 ||| ||||||||||||||||||||| || || | ||| | | |||| ||| || Sbjct 723 GTCTTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAAAACTCATTGGCCCTCAGTT 782 Query 912 TCAGTTTCAAGTTAGAGCTGCAAGTTTCTTTATCGATGAGGAGAAGAAAGTTGTTGTGGT 971 ||||||| ||| | | | | ||||||| || || |||||||||||||| | ||| || Sbjct 783 TCAGTTTT--GTTTGGG--G-A-GTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTGT 836 Query 972 TTTTGATAAAGAGAAA-A-AATATTTAGTGTCCACTCACAACATAGCTTACATCTTTGGA 1029 ||||||||||| | | | |||| || | | | ||| ||||||||||| ||||| Sbjct 837 TTTTGATAAAG-GCTACAGAATAC--AGCG-C---T-ACA---TAGCTTACATCATTGGA 885 Query 1030 GAGGATGGAACCTTGGAACAAGTGGATCTTGGATTATCTGCAGACA-AATTTTGTTATCC 1088 | ||||||| || || || |||||||||||||| ||| ||||| || | |||| || Sbjct 886 GTGGATGGATCCATGAAAGAAGTGGATCTTGGAGAATC---AGACAGAAGGT-GTTACCC 941 Query 1089 ACTTGTGTGCTGTTATGTTCCAAGTTTAGTGCAGCTT 1125 | ||||||| | ||||||||||||| ||||||| ||| Sbjct 942 AATTGTGTGGTCTTATGTTCCAAGTCTAGTGCAACTT 978 > AT5G28527.1 | Symbols: | pseudogene, hypothetical protein | chr5:10513366-10514577 FORWARD LENGTH=1212 Length=1212 Score = 279 bits (151), Expect = 3e-74 Identities = 705/954 (74%), Gaps = 112/954 (12%) Strand=Plus/Plus Query 242 ACGTTGAGTCATGTATAAAGCCTGAAGGTGAACTTATTTGCTTAGACG----A-A-GAAG 295 ||||||| |||||||| ||| ||||| | |||||||| || |||||| | | |||| Sbjct 294 ACGTTGAATCATGTATCGAGCATGAAGCTAAACTTATTAGCCTAGACGATTCATATGAAG 353 Query 296 ACGATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATTATGGAAGATAACA 355 | | |||||| |||| ||||||||||||||||||||||||||||||| |||| | | Sbjct 354 TCCAAGTATCTAAAGTTTTTCACTGCGACGGTTTATTGTTATGCATTACAAAAGACCATA 413 Query 356 CTAGGATTGTGGTTTGGAACCCGTATTGGGGGCATACCTGGTGGATCGTGCCTACACATA 415 ||| | | | |||||||||||||||||||| || ||| |||||||| || | ||||| Sbjct 414 CTAAGCTCCTAGTTTGGAACCCGTATTGGGGTCAAACCAAGTGGATCGAACCCATACATA 473 Query 416 ATTTCC-ACAAATTGGACGTT-TATACGTATGCTCTTGGATACAAGCAGAGCAGCAAATC 473 || | || || |||| || ||| ||||||| |||||||| | || || |||| | Sbjct 474 CTT-CATACCAACTGGAA-TTGTATTCGTATGCGATTGGATACGA-CA-AG-AGCAG--C 526 Query 474 ATGTCGCAGCTACAAAATCTTGAGATTTA-TTGATT--T-TT-CTCG-C-ACTTGTT-TT 525 |||||||||||||||||||| ||| |||||| | || | | | || | || || Sbjct 527 ----CGCAGCTACAAAATCTTGAG-TTTCCTTGATTCATATTACCCAACTACCT-TTGTT 580 Query 526 GA-ATTCAAAATCTACAA-TATAAACTCTGATTCATGGAAGGTTCTTGATGTC--T-CTC 580 || || |||||||||| | | ||| ||||| |||||||| ||| ||||||||| | ||| Sbjct 581 GATAT-CAAAATCTACGAGTGTAA-CTCTGGTTCATGGAGGGTACTTGATGTCGCTGCTC 638 Query 581 CAGATTGGAAGATAGATTCTTAT-AGTCGTGGCGTGTCTCTCAAGGGAAATACGTACTGG 639 |||| || || ||||| |||| || |||| || ||||||||||||||||| |||||| Sbjct 639 CAGACGGGCAGGTAGATGATTATGAGG-GTGGAGTCTCTCTCAAGGGAAATACTTACTGG 697 Query 640 TTTGCTAGAGAGAGGCA---AGGAAG--CAGTA--------C---T-TT-CTTAGTCTGT 681 |||| || ||||| || || || ||||| | | || |||||| ||| Sbjct 698 TTTGTTAAAGAGAAGCCTTCAGAAACAACAGTAGGTGAGGACGACTCTTTCTTAGTATGT 757 Query 682 TTTGATTTCACAAGAGAGAGATTTAGATCACGTTTT-CCTCTGCCGATTCAGCCGTATAT 740 ||||||||||||| |||||||||| | | | |||| ||||| ||| || || |||| Sbjct 758 TTTGATTTCACAAAAGAGAGATTTGGGCCGC-TTTTGCCTCTACCGTTTGAGTGGTATCC 816 Query 741 TTTAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTCAGCG 800 | |||||||| | |||||||||||||||||| |||||||| |||||||||||| |||| Sbjct 817 TGAAGATACCGCCACTCTATCTAGTGTTAGAGAGGAGCAGCTTGCGGTTTTATTTTAGCG 876 Query 801 CTCAAGATTATCAGAGATGGAGATGGAGAT-CTGGATAACCACGAA-ACTTGAGCCCAAC 858 | || | || |||| | |||||| | ||||||| || || | ||||||||||| Sbjct 877 ATGG-GAC-A-CATCGATGT-G--GGAGATAC-GGATAACTACTAAGA-TTGAGCCCAAC 928 Query 859 GCGGTGTCGTGGAA--CAG--C--AAG-GTGTTCTTAG--CA---A-TGGATATTGGCCT 905 ||||||||||||| | | | || ||| | || || | | | | ||||| | Sbjct 929 GCGGTGTCGTGGAGGTC-GTTCTTAACAGTGAA-TGAGAACACTCACTTGCT-TTGGCTT 985 Query 906 TCAATTTCAGTTT-CAAGTTAGAGCTGCAAGTTTCTTTATCGATGAGGAGAAGAAAGTTG 964 | ||||| ||| | |||| || || |||||||||||| || ||||||||| |||| | Sbjct 986 TGGCTTTCAATTTGCG-GTTACAGGTGGAAGTTTCTTTATTGACGAGGAGAAGGAAGTCG 1044 Query 965 TTGTGGTTTTTGATAAAG---AGAAA-A--AATAT--TTAGTGT---CCAC---TCACAA 1010 |||||||||| ||||| | ||| | || || ||| | |||| || || Sbjct 1045 CGGTGGTTTTTGGTAAAGTCTACAAAGACGAAAATGGTTA-TACAAACCACCGCTCTCA- 1102 Query 1011 CATAGCTTA-CATCTTTGGAGAGGATGGAACCTTGGAACAAGTGGATCTTGGATTATCTG 1069 || | |||| || || |||| |||||| ||||| || ||||| || ||||| |||| Sbjct 1103 CA-A-CTTAGCAG-TT-GGAGTGGATGGTTCCTTGAAAAAAGTGTATGTTGGAGAATCTC 1158 Query 1070 CAGAC--AAATTTTGTTATCCACTTGTGTGCTGTTATGTTCCAAGTTTAGTGCA 1121 ||||| ||||| ||||||||||||| |||| ||||||||||||||||||||| Sbjct 1159 CAGACTGAAATT--GTTATCCACTTGT-TGCTCTTATGTTCCAAGTTTAGTGCA 1209 > AT5G36730.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:14436317-14437549 FORWARD LENGTH=1233 Length=1233 Score = 143 bits (77), Expect = 5e-33 Identities = 344/464 (74%), Gaps = 54/464 (12%) Strand=Plus/Plus Query 679 TGTTTTGATTTCACAAGAGAGAGATTTAGATCACGTTTTCCTCTGCCGATTCAG-C-CGT 736 ||||||||||| |||| |||||||||| || | ||| ||| ||||||| |||| | ||| Sbjct 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTTCATCTGCCGTTTCACTCTCGT 774 Query 737 ATATTTTAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTC 796 | | || ||||| |||| ||| |||||||||||||||||||||| ||||| ||||||| Sbjct 775 -TGTGTT-GATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTTATTTC 832 Query 797 AGCG-CTCAAGATTATCAGA-GATGG-AGATGGAGATCTGGATAACCACGAA-ACTTGAG 852 || | ||||| | | | | ||| ||| || || ||||||| || || | ||||| Sbjct 833 AG-GACTCAAAA--A-C-GTTGATCCTAGA-GGT-AT--GGATAACGACTAAGA-TTGAG 882 Query 853 CCCAACGCGGTGTCGTGGAACAGCAAGGTGTTCTTAGCAA-TGGATATTG-G-CCT-TCA 908 || || ||||| || |||| ||||||||||||||||| || || |||| | | || ||| Sbjct 883 CCTAATGCGGTCTCATGGAGCAGCAAGGTGTTCTTAG-AAGTGAATAT-GAGTCCACTCA 940 Query 909 AT--TT--CAGTTTCAAGTTAG-AGCT--GCAAGTTTCTTTATCGATGAGGAGAAGAAA- 960 | || |||||| || | | |||| | |||||||| || | ||||||||| ||| Sbjct 941 CTGGTTTTCAGTTT-AA-TC-GTAGCTTTGGGAGTTTCTTCATTGTTGAGGAGAA-AAAT 996 Query 961 GTTGTTGTGGTTTTTGAT-AAAGAGAAAAAATATTTAGTGTCCACTCACAACATAGCTTA 1019 || ||||||||| | || |||| || || || | || | ||| ||||||| Sbjct 997 GTCGTTGTGGTTCCT-ATTAAAG-GAGGGCAT-TTCAA-----ACG-A-AACCTAGCTTA 1046 Query 1020 CATCTTTGGAGAGGATGGA-ACCTTGGAACAAGTGGATCTTGGATTATCT-G--CAGACA 1075 |||| ||||| |||||| | || || || |||||||||||||| | | | || | | Sbjct 1047 CATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATATA 1105 Query 1076 AAT-TTTGTTATCCACTTGTGTGCTGTTATGTTCCAAGTTTAGT 1118 || ||| || |||| |||||||| |||||||||||||||||| Sbjct 1106 TATATTT-TTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGT 1148 > AT5G36820.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:14495617-14496849 FORWARD LENGTH=1233 Length=1233 Score = 143 bits (77), Expect = 5e-33 Identities = 344/464 (74%), Gaps = 54/464 (12%) Strand=Plus/Plus Query 679 TGTTTTGATTTCACAAGAGAGAGATTTAGATCACGTTTTCCTCTGCCGATTCAG-C-CGT 736 ||||||||||| |||| |||||||||| || | ||| ||| ||||||| |||| | ||| Sbjct 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTTCATCTGCCGTTTCACTCTCGT 774 Query 737 ATATTTTAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTC 796 | | || ||||| |||| ||| |||||||||||||||||||||| ||||| ||||||| Sbjct 775 -TGTGTT-GATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTTATTTC 832 Query 797 AGCG-CTCAAGATTATCAGA-GATGG-AGATGGAGATCTGGATAACCACGAA-ACTTGAG 852 || | ||||| | | | | ||| ||| || || ||||||| || || | ||||| Sbjct 833 AG-GACTCAAAA--A-C-GTTGATCCTAGA-GGT-AT--GGATAACGACTAAGA-TTGAG 882 Query 853 CCCAACGCGGTGTCGTGGAACAGCAAGGTGTTCTTAGCAA-TGGATATTG-G-CCT-TCA 908 || || ||||| || |||| ||||||||||||||||| || || |||| | | || ||| Sbjct 883 CCTAATGCGGTCTCATGGAGCAGCAAGGTGTTCTTAG-AAGTGAATAT-GAGTCCACTCA 940 Query 909 AT--TT--CAGTTTCAAGTTAG-AGCT--GCAAGTTTCTTTATCGATGAGGAGAAGAAA- 960 | || |||||| || | | |||| | |||||||| || | ||||||||| ||| Sbjct 941 CTGGTTTTCAGTTT-AA-TC-GTAGCTTTGGGAGTTTCTTCATTGTTGAGGAGAA-AAAT 996 Query 961 GTTGTTGTGGTTTTTGAT-AAAGAGAAAAAATATTTAGTGTCCACTCACAACATAGCTTA 1019 || ||||||||| | || |||| || || || | || | ||| ||||||| Sbjct 997 GTCGTTGTGGTTCCT-ATTAAAG-GAGGGCAT-TTCAA-----ACG-A-AACCTAGCTTA 1046 Query 1020 CATCTTTGGAGAGGATGGA-ACCTTGGAACAAGTGGATCTTGGATTATCT-G--CAGACA 1075 |||| ||||| |||||| | || || || |||||||||||||| | | | || | | Sbjct 1047 CATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATATA 1105 Query 1076 AAT-TTTGTTATCCACTTGTGTGCTGTTATGTTCCAAGTTTAGT 1118 || ||| || |||| |||||||| |||||||||||||||||| Sbjct 1106 TATATTT-TTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGT 1148 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65411310135 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5