BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg342698 Length=1110 Score E Sequences producing significant alignments: (Bits) Value AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | ch... 924 0.0 AT3G22770.1 | Symbols: | F-box associated ubiquitination effec... 582 2e-165 AT3G19470.1 | Symbols: | F-box and associated interaction doma... 536 2e-151 AT3G24580.1 | Symbols: | F-box and associated interaction doma... 455 4e-127 AT3G17400.1 | Symbols: | F-box family protein | chr3:5954887-5... 202 6e-51 AT5G36200.1 | Symbols: | F-box and associated interaction doma... 135 7e-31 AT4G10740.1 | Symbols: | F-box and associated interaction doma... 75.0 1e-12 AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 73.1 5e-12 AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 73.1 5e-12 AT5G60560.1 | Symbols: | F-box and associated interaction doma... 67.6 2e-10 AT3G25090.1 | Symbols: | F-box associated ubiquitination effec... 67.6 2e-10 AT2G28280.1 | Symbols: | pseudogene, hypothetical protein | ch... 67.6 2e-10 AT1G67455.1 | Symbols: | F-box and associated interaction doma... 58.4 1e-07 > AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | chr3:9184970-9186171 FORWARD LENGTH=1202 Length=1202 Score = 924 bits (500), Expect = 0.0 Identities = 705/800 (88%), Gaps = 29/800 (4%) Strand=Plus/Plus Query 1 ATGACGAAGATATCCAATCTTCCTAGAGATTTGGCGGAGGAGGTGCTCTGTAAG-ATTCC 59 ||||| ||||||||||||||||| || ||||||||||| |||||||||||| || ||||| Sbjct 42 ATGACTAAGATATCCAATCTTCCAAGGGATTTGGCGGAAGAGGTGCTCTGT-AGAATTCC 100 Query 60 GTTGACATCTCTGCGAACTATCCGATCCACTTGCAAAAAGTGGAACACTTTATCCAAATA 119 |||||| |||||| ||||| | |||| ||||||||| ||||||||| ||||||||||| Sbjct 101 GTTGACGTCTCTGAGAACTGTTTGATCTTCTTGCAAAACGTGGAACACGTTATCCAAATA 160 Query 120 TGAGAGTTTTGCAAAGAAGTACCTTGGTGATCAAGCAAAAGTAGCAG-AAAGGGAAAGAG 178 |||||| ||||||||||||||||||||||||||||||||| |||| | ||||| |||||| Sbjct 161 TGAGAGCTTTGCAAAGAAGTACCTTGGTGATCAAGCAAAATTAGCTGCAAAGG-AAAGAG 219 Query 179 AGTTTATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTTAATCTTCAAA 238 |||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 220 AGTTTATGATGGTCGTGATGATGAATTTTAGGGTTTAATTGATGAGAGTCAATCTTCAAA 279 Query 239 ACAATGTTGAATCATCATGTATAAAGCGTGAAGCTGAACTTATTAGCTTAGGTGATGAAG 298 |||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||| Sbjct 280 ACAAGGTTGAATCATCATGTATAAAACGTGAAGCTAAACTTATTAGTTTAGGCGATGAAG 339 Query 299 TTGATATATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCAGCATCACCAAAG 358 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 340 TTGATATATCTCAAGTCTTTCACTGCAACGGTTTATTGTTATTCATCAGCATCACCAAAG 399 Query 359 ACAAGACTAGGCTCGTGGTTTGGAACCCGTAT--T-GGGGACATACCCGGACGATCGAAC 415 ||||||||||||| |||||||||||||||||| | ||||||||||||| |||||||||| Sbjct 400 ACAAGACTAGGCTAGTGGTTTGGAACCCGTATGATTGGGGACATACCCGTACGATCGAAC 459 Query 416 TCACACATAACTTACAGATAATCGATAG--ATA-TAT--GTATGCTCTCGGATACAACAA 470 ||||||||||| || ||| || |||| ||| ||| ||||||||||||||||||||| Sbjct 460 CCACACATAACTGCCACATATTCAATAGGTATAATATATGTATGCTCTCGGATACAACAA 519 Query 471 GAGC-AGCA---AATCCCACAAAATCTTGAGGTTCATTACTTACTGGGATCCCAATTTTG 526 |||| |||| |||||||||||||||||||||| ||||||||||| || || || Sbjct 520 GAGCTAGCAGCTAATCCCACAAAATCTTGAGGTTTGTTACTTACTGG-ATGAGGGTTATG 578 Query 527 AA-GAGTTCAAAATCTACGATTTGAACTCTAATTCATGGAGGGTTCTTGATGTCACTCCA 585 | ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 579 GATGAGTTCATAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCA 638 Query 586 GACTGGACGATAAGTCATATTAACCATGGCGTGTCTCTCAAGGGAAATGCGTACTGGTTT 645 || |||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||| Sbjct 639 GATTGGACGATAAGTTATATGAACCTTGGCGTGTCTCTCAAGGGAAATGCATACTGGTTT 698 Query 646 GCTAATGAGA-AGTATTCTGAAACAAGAAGAACCGACCATTTTTTCTTAGTCTGTTTTGA 704 |||| ||||| | ||||| |||||| || | || || |||||||||||||||||| Sbjct 699 GCTACTGAGAGA-TATTCCGAAACA-GA----C-GA---TTATTTCTTAGTCTGTTTTGA 748 Query 705 TTTCACAAGAGAGACATTTGGACCGCTTTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGA 764 ||||||||||||||||||||| || |||||| |||||||||||| ||||| | ||||| Sbjct 749 TTTCACAAGAGAGACATTTGGGCCTCTTTTGACTCTTCCGTTTGTGTTTGTTAAATCTGA 808 Query 765 AGATGCTATGAGTGTATCTA 784 ||||| |||| ||||||||| Sbjct 809 AGATGTTATGTGTGTATCTA 828 Score = 411 bits (222), Expect = 1e-113 Identities = 290/321 (90%), Gaps = 12/321 (4%) Strand=Plus/Plus Query 779 TATCTAGTCCGTGGGATACATTAAAGATGGAGATCTGGATTACGTCTAAGATTGAGCCCA 838 |||| || |||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 858 TATC-AG-CCGTGGGATAAATAAAAGATGGAGATCTGGATTACGTCTACGATTGAGCCCA 915 Query 839 ACGTGGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTATaaaaaaaCTCATTGCCC 898 ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 916 ACGCGGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAAAACTCATTGGCC 975 Query 899 CTCAGTTTCAGTTTTACTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGG 958 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 976 CTCCGTTTCAGTTTTGTTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGG 1035 Query 959 TTTTTGATAAATACTACAACGATCGGCGCAGCATAGCTTACATCATTGGAG--T--GGA- 1013 ||||||||||| ||||||| ||| ||||| |||||||||||||||||||| | ||| Sbjct 1036 TTTTTGATAAAGACTACAAAGATAAGCGCAACATAGCTTACATCATTGGAGACTTTGGAG 1095 Query 1014 T-G--G-ATCCTTCAAAGCAGTGGATCTCGGAGAATCGGCATACGCAATGTGTTACCCAC 1069 | | | |||||| |||| || ||||||||||||||| || ||||||||||||||||||| Sbjct 1096 TCGATGGATCCTTTAAAGAAG-GGATCTCGGAGAATCAGCCTACGCAATGTGTTACCCAC 1154 Query 1070 TTGTGTGCTCTTATGTTCCAA 1090 || |||||||||||||||||| Sbjct 1155 TTATGTGCTCTTATGTTCCAA 1175 > AT3G22770.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:8047684-8048667 REVERSE LENGTH=984 Length=984 Score = 582 bits (315), Expect = 2e-165 Identities = 536/635 (84%), Gaps = 45/635 (7%) Strand=Plus/Plus Query 184 ATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTTAATC-T--T--CAA- 237 |||||||||||||||||||||||||||||||||||||||||||| |||| | | ||| Sbjct 1 ATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTGATAACAAC 60 Query 238 -------AA-CA--AT-GT--TGA--ATCATCATGTATAAAGCGTGAAGCTGAACTTATT 282 || || || | | | ||||||||||||||| ||||||||| || ||||| Sbjct 61 GTCGTTGAATCATCATCATCATCATCATCATCATGTATAAAACGTGAAGCTAAAGTTATT 120 Query 283 AGCTTAGGTGATGAAG-T--TGATATATCTCAAGTCTTTCACTGTGACGGTTTATTGTTA 339 |||||||| || |||| | |||||||||||||||||||||||| ||||||||||||||| Sbjct 121 AGCTTAGGCGACGAAGTTGATGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTA 180 Query 340 TGCATCAGCATCACCAAAGACAAGACTAGGCTCGTGGTTTGGAACCCGTATTGGGGACAT 399 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 181 TGCATCAGCATCACCCAAGCCAAGACTAGGCTCGTGGTTTGGAACCCGTATTGGGGGCAT 240 Query 400 ACCCGGACGATCGAACTCACACATAACTTACAGATAA-T-CGATAGATATATGT-ATGCT 456 |||||| | ||||| | ||||||| | || || | || | ||| || ||| | | ||||| Sbjct 241 ACCCGGTCAATCGAGCCCACACATCAGTT-CA-ACAAATTCGACAGCTAT-TCTTATGCT 297 Query 457 CTCGGATACAACAAGAGCAGCAAATCCCACAAAATCTTGAGGT-TCATTACTTACTGG-G 514 ||||||||| ||||||||||||||||||||||||||||||||| | ||||||| | | | Sbjct 298 CTCGGATACGACAAGAGCAGCAAATCCCACAAAATCTTGAGGTGT-ATTACTTGTTTGAG 356 Query 515 ATCCCAATTTTGAAGAGTTCAAAATCTACGATTTGAACTCTAATTCATGGAGGGTTCTTG 574 | |||| |||| | ||||||| |||||||||||| ||||||||||||||||||||| || Sbjct 357 ACCCCA-TTTTCATGAGTTCATAATCTACGATTTTAACTCTAATTCATGGAGGGTTTTTC 415 Query 575 ATGTCACTCCAGACTGGACGATAAGTCA-TATTAACCA-TGGCGTGTCTCTCAAGGGAAA 632 ||||||||||||||||| | || || | |||||| | ||||||||||||||||||||| Sbjct 416 ATGTCACTCCAGACTGG-CAATTAGGGACTATTAAT-AGTGGCGTGTCTCTCAAGGGAAA 473 Query 633 TGCGTACTGGTTTGCT-AATGAGAAGTATT-CTGAAACAAG--AAG-AACCGACCATTTT 687 ||| | |||| ||||| || |||||||||| | |||||||| || || ||| | ||| Sbjct 474 TGCCTTCTGGGTTGCTGAA-GAGAAGTATTAC-GAAACAAGTGAAACAAACGAAGAGTTT 531 Query 688 TTCTTAGTCTGTTTTGATTTCACAAGAGAGACATTTGGACCGCTTTTGCCTCTTCCGTTT 747 |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 532 TTCTTACTCTCTTTTGATTTCACAAGAGAGACATTTGGACCACTTTTGCCTCTTCCGTTT 591 Query 748 GAGTTTGCTGTTTCTGAAGATGCTATGAGTGTATC 782 |||||| || |||||||||||| |||||||||| Sbjct 592 CAGTTTGTTGAATCTGAAGATGCTTTGAGTGTATC 626 Score = 420 bits (227), Expect = 2e-116 Identities = 300/334 (90%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 779 TATCTAGTCCGTGGGATACATTAAAGATGGAGATCTGGATTACGTCTAAGATTGAGCCCA 838 |||| || |||||||||||||||| ||||||||||||| | ||||||||||||||||||| Sbjct 658 TATC-AG-CCGTGGGATACATTAATGATGGAGATCTGGGTCACGTCTAAGATTGAGCCCA 715 Query 839 ACGTGGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTATaaaaaaaCTCATTGCCC 898 ||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 716 ACGCGGTGTCTTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAAAACTCATTGGCC 775 Query 899 CTCAGTTTCAGTTTTACTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGG 958 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 776 CTCAGTTTCAGTTTTGTTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTG 835 Query 959 TTTTTGATAAATACTACA-ACGATCGGCGC-AGCATAGCTTACATCATTGGAGTGGATGG 1016 ||||||||||| ||||| | | | |||| | ||||||||||||||||||||||||||| Sbjct 836 TTTTTGATAAAGGCTACAGAATA-CAGCGCTA-CATAGCTTACATCATTGGAGTGGATGG 893 Query 1017 ATCCTTCAAAGCAGTGGATCTCGGAGAATCGGCATACGCAATGTGTTACCCACTTGTGTG 1076 |||| | |||| ||||||||| |||||||| | | | | || |||||||||| ||||||| Sbjct 894 ATCCATGAAAGAAGTGGATCTTGGAGAATCAG-ACA-G-AAGGTGTTACCCAATTGTGTG 950 Query 1077 CTCTTATGTTCCAAGTATAGTGCAACTTAATTAG 1110 ||||||||||||||| ||||||||||||||||| Sbjct 951 GTCTTATGTTCCAAGTCTAGTGCAACTTAATTAG 984 > AT3G19470.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:6749524-6751014 FORWARD LENGTH=1388 Length=1388 Score = 536 bits (290), Expect = 2e-151 Identities = 470/551 (85%), Gaps = 35/551 (6%) Strand=Plus/Plus Query 249 ATCATCATGTATAAAGCGTGAAGCTGAACTTATTAGCTTA-G-G-TGATGAAGTTGATAT 305 ||||||||||||||| ||||||||| |||||||||||||| | | ||| |||| |||||| Sbjct 406 ATCATCATGTATAAAACGTGAAGCTAAACTTATTAGCTTAGGCGATGAAGAAGCTGATAT 465 Query 306 ATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAGAC 365 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 466 ATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCAGCATCACCGAATCCAAGAC 525 Query 366 TAGGCTCGTGGTTTGGAACCCGTATTGGGGACATACCCGGACGAT-CGAACTCACACAT- 423 ||||||||| |||||||||||||||||||| ||||||||| || ||| | ||||||| Sbjct 526 TAGGCTCGTTGTTTGGAACCCGTATTGGGGGCATACCCGGTT-ATTCGAGCCCACACATC 584 Query 424 AACTTACAGATAA-T-CGATAGATATAT-GTATGCTCTCGGATACAACAAGAGCAGCAAA 480 || || || | || | |||||| ||| | |||||||||||||||| |||||||| ||||| Sbjct 585 AA-TT-CA-ACAAATTCGATAGCTAT-TCGTATGCTCTCGGATACGACAAGAGCCGCAAA 640 Query 481 TCCCACAAAATCTTGAGGT-TCATTACTTACTGGGATCCCAATTTTGAAGAGTTCAAAAT 539 |||||||||||||||||| | ||||||| | ||||||| || |||||| Sbjct 641 TCCCACAAAATCTTGAGGGGT-ATTACTTGTTTGGATCCC--TT----------CAAAAT 687 Query 540 CTACGATTTGAACTCTAA-TTCATGGAGGGTTCTTGATGTCACTCCAGACTGG-ACGATA 597 ||||||||| |||||| | || |||||||| ||||||||| ||||| || ||| || || Sbjct 688 CTACGATTTTAACTCTGACTT-ATGGAGGGATCTTGATGTAACTCCGGAGTGGCACT-TA 745 Query 598 AGTCATATTAACCATGGCGTGTCTCTCAAGGGAAATGCGTACTGGTTTGCTA-ATGAGAA 656 | || || ||||||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 746 TGGCAAATGCTCCATGGCGTGTCTCTCAAGGGAAATGCCTACTGGTTTGCTAGA-GAGAA 804 Query 657 GTATTCTGAAACAA-GAAGAACCGACCATTTTTTCTTAGTCTGTTTTGATTTCACAAGAG 715 ||| | ||||||| | | | | ||||||||||||||| ||||||||||||||||||| | Sbjct 805 TTATACCGAAACAATGGACA-CAGACCATTTTTTCTTACTCTGTTTTGATTTCACAAGCG 863 Query 716 AGACATTTGGACCGCTTTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGAAGATGCTATGA 775 |||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 864 AGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGAAGATACTATGA 923 Query 776 GTGTATCTAGT 786 ||||||||||| Sbjct 924 GTGTATCTAGT 934 Score = 370 bits (200), Expect = 2e-101 Identities = 293/336 (87%), Gaps = 13/336 (4%) Strand=Plus/Plus Query 779 TATCTAGTCCGTGGGA-TACATTAAAGATGGAGATCTGGATTACGTCTAAGATTGAGCCC 837 |||| || |||||||| || ||| || |||| |||||| | |||||||||||||||||| Sbjct 962 TATC-AG-CCGTGGGATTA-TTTACAGTTGGACATCTGGGTGACGTCTAAGATTGAGCCC 1018 Query 838 AACG-TGGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTATaaaaaaaCTCATT-G 895 |||| | |||||||||||||||||||||||||||||||||||| ||||| ||||| | | Sbjct 1019 AACGCT-GTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGAGTTTAAAACAACTCGTCAG 1077 Query 896 CCCCTCAGTTTCAGTTTTACTTG-GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCT 954 ||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||| Sbjct 1078 CCC-TCAGTTTCAGTTA-ACTTTTGGGAGTTTCTTCATCGACGAGGAGAAGAAAGTCGCT 1135 Query 955 GTGGTTTTTGATAAATACTACAACGATCGGCGCAGCATAGCTTACATCATTGGAGTGGAT 1014 ||||||||||||||| ||||| | || ||||| ||||||||||||| ||||||||||| Sbjct 1136 GTGGTTTTTGATAAAGACTACGATAATAAGCGCAACATAGCTTACATCTTTGGAGTGGAT 1195 Query 1015 GGATCCTTCAAAGCAGTGGATCTCGGAGAATCGGCATACGCAATGTGTTACCCACTTGTG 1074 |||||||| |||||||| ||||||||||| || | | || || ||||| ||||||||| Sbjct 1196 GGATCCTTTAAAGCAGTTGATCTCGGAGATTCAG-AC-CGAAA-GTGTTTTCCACTTGTG 1252 Query 1075 TGCTCTTATGTTCCAAGTATAGTGCAACTTAATTAG 1110 |||||||||||||||||| ||||||||||||||||| Sbjct 1253 TGCTCTTATGTTCCAAGTCTAGTGCAACTTAATTAG 1288 Score = 285 bits (154), Expect = 6e-76 Identities = 224/256 (88%), Gaps = 12/256 (5%) Strand=Plus/Plus Query 7 AAGATATCCAATCTTCCTAGAGATTTGGCGGAGGAGGTGCTCTGTAAG-ATTCCGTTGAC 65 ||||| | ||||||||| ||||||||| ||||||||||||||||| || ||||||||||| Sbjct 137 AAGATGTACAATCTTCCAAGAGATTTGCCGGAGGAGGTGCTCTGT-AGAATTCCGTTGAC 195 Query 66 ATCTCTGCGAACTATCCGATCCACTTGCAAAAAGTGGAACACTTTATCCAAATATGAGAG 125 ||||||| | || ||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct 196 ATCTCTGAGGCCTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAG 255 Query 126 TTTTGCAAAGAAGTACCTTGGTGATCAAGCAAAAGTAGC-AG-AAAGGGAAAGAGAGTTT 183 |||||||||||| ||| | || ||||||||||||| | || | | | |||| |||||| Sbjct 256 CTTTGCAAAGAAGCACC-T--TGCTCAAGCAAAAGTA-CTAGCAGACGCAAAG-GAGTTT 310 Query 184 ATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTTAATCTTCAAAACAA- 242 ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 311 ATGGTGGTCTTGATGATGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTCAAAACAAC 370 Query 243 -T-GTTGAATCATCAT 256 | ||||||||||||| Sbjct 371 GTTGTTGAATCATCAT 386 > AT3G24580.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8969162-8970298 FORWARD LENGTH=1137 Length=1137 Score = 455 bits (246), Expect = 4e-127 Identities = 609/774 (79%), Gaps = 66/774 (9%) Strand=Plus/Plus Query 1 ATGACGAAGATATCCAATCTTCCTAGA-GATTTGGCGGAGGAGGTGCTCTGTAAGATTCC 59 ||||||||||| || ||||| |||| | ||||||||||| |||||||||| || | || | Sbjct 1 ATGACGAAGATGTCTAATCTCCCTA-ATGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTC 59 Query 60 GTTGACATCTCTGCG-AACTATCCGATC-CACTTGCAAAAAGTGGAACACTTTATCCAAA 117 ||| ||||||||| | ||| ||||| | ||||| ||| | ||||| |||||||| ||| Sbjct 60 GTTAACATCTCTGAGAAAC-GTCCGA-CTTACTTGTAAAGATTGGAATACTTTATCTAAA 117 Query 118 TATGAGAGTTTTGCAAAGAAGT-ACCTTGGTGATCAAGCAAAAGTAGCAG-AAAGGGAAA 175 |||||| ||||||||||| | |||||||| ||||||||| |||||||| || ||||| Sbjct 118 GGTGAGAGCTTTGCAAAGAA-TCACCTTGGTTATCAAGCAATAGTAGCAGCGAA-GGAAA 175 Query 176 GAGAGTTTATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTTAATC-TT 234 |||||||||| ||||| |||||||| ||||||||||||||||||| |||| || | || Sbjct 176 AAGAGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTT 234 Query 235 CAAAACAATGTTGAATCA-TCATGTATAAAGCGTGAAGCTGAACTTATTAGCTTAGGTGA 293 | |||||| | | | || ||||| |||| ||||| ||| ||||||||||| || || Sbjct 235 C---ACAATG-ACATTGAGTCGTGTATTAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGA 290 Query 294 TGAAGTTGATATATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCA--G--CA 349 |||||| ||| ||||||||||||||||||| |||||||||||| ||||||||| | | Sbjct 291 TGAAGTCGATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGA 350 Query 350 TCACCAAAGACAA-GACT-AGGCTCGTGGTTTGGAACCCGTATTGGGGACATACCCGGAC 407 | | | |||| || | || ||| |||| ||||||||||||||||||| || || ||| Sbjct 351 T-AACGAAGATAACG-CTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTG 407 Query 408 GATCGAACTC-ACACATAACTTACAGATAA-TCGATA-GATATATGTATGCTCTCGGATA 464 ||||| | || ||| |||| || || | || | || | | |||| ||||||||||||||| Sbjct 408 GATCG-AGTCTACAAATAATTTCCACA-AATTGGACATG-TATACGTATGCTCTCGGATA 464 Query 465 CAACAAGAGCAGCAAAT-----C-C--C-ACAAAATCTTGAGGTTCATT-ACTTACTGGG 514 ||| ||||||||||||| | | | ||||||||||||| || ||| | || | Sbjct 465 CAAGAAGAGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGA-TT--T-TT 520 Query 515 ATCCCAATT-TTGAAGAGTTCAAAATCTACGATTTGAACTCTAATTCATGGAGGGTTCTT 573 ||||| || || ||||||||||||||| || | |||||| ||||||||| ||||||| Sbjct 521 CTCCCACTTGTT-CTGAGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTT 579 Query 574 GATGTCACTCCAGACTGGACGATA-AGTCATATTAACCATGGCGTGTCTCTCAAGGGAAA 632 ||||| |||||||||||| |||| | || || || | ||||||||||||||||||||| Sbjct 580 GATGTGTCTCCAGACTGGAAGATAGATTCTTA-TATTCGTGGCGTGTCTCTCAAGGGAAA 638 Query 633 TGCGTACTGGTTTGCTAATGAGAAGTATTCTGAAACAAGAAGA-ACCGACCATTTTTTCT 691 | | |||||| ||||| | ||| || | | || | || | || |||| ||||| Sbjct 639 TACATACTGGATTGCT-A-GAG-AG-A----G--GCACG--GATA-CGGCCATACTTTCT 685 Query 692 TAGTCTGTTTTGATTTCACAAGAGAGACATTT-GGACCGCTTTTGCCTCTTCCG 744 ||||||||||||||||||||||||||| |||| || | || ||| ||||| ||| Sbjct 686 TAGTCTGTTTTGATTTCACAAGAGAGAGATTTAGGTC-GCGTTTACCTCTGCCG 738 Score = 139 bits (75), Expect = 5e-32 Identities = 244/322 (76%), Gaps = 26/322 (8%) Strand=Plus/Plus Query 795 TACATTAAAGATGGAGATCTGGATTACGTCTAAGATTGAGCCCAACGTGGTGTCGTGGAA 854 |||||| ||||| |||||||| | || | || ||||||||||| | ||||| |||||| Sbjct 819 TACATTGGAGATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGTTGTGGAA 878 Query 855 CAGCAAGGTGTTCTTATCAGTGAGTATaaaaaaaCTCA-TTGCCCCTCAGTTTC-AGTTT 912 |||||||||||||||| | ||| | || | ||||| || |||||||| |||| Sbjct 879 CAGCAAGGTGTTCTTAGCTGTG-G-AT--ATGCACTCACTTAAGTTTCAGTTTCAAGTTA 934 Query 913 TA-CTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT----A 967 | ||| ||||||||| || ||||||||||||| ||| | ||| ||||||||| | Sbjct 935 GAGCTT--CGAGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAAGA 992 Query 968 AATAC--TA--CAACGAT-C-GGCGCAGCATAGCTTACATCATTGGAGTGGATGGATCCT 1021 || || || | || | | |||| || |||||||||| |||||||||||||| ||| Sbjct 993 AAAACGTTATTTAGCG-TCCTCTCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCT 1051 Query 1022 TCAAAGC-AGTGGATCTCGGAGA-ATCGGCATACGCAATGTG-TTACCCACTTGTGTGCT 1078 || | |||||| || ||| | || | | || ||| || ||||||||||||||||| Sbjct 1052 GGGAA-CAAGTGGACCTTGGA-ATGTCTGTAGAC-AAATTTGTTTACCCACTTGTGTGCT 1108 Query 1079 CTTATGTTCCAAGTATAGTGCA 1100 |||||||||||||| ||||||| Sbjct 1109 CTTATGTTCCAAGTTTAGTGCA 1130 > AT3G17400.1 | Symbols: | F-box family protein | chr3:5954887-5955444 FORWARD LENGTH=558 Length=558 Score = 202 bits (109), Expect = 6e-51 Identities = 309/401 (77%), Gaps = 31/401 (8%) Strand=Plus/Plus Query 13 TCCAATCTTCCTAGAGATTTGGCGGAGGAGGTGCTCTGTAAGATTCCGTTGACATCTCTG 72 ||| ||||||| || |||||||| |||||||| || | |||||||||| ||||||||||| Sbjct 13 TCCGATCTTCCAAGTGATTTGGCAGAGGAGGTTCTGTCTAAGATTCCGGTGACATCTCTG 72 Query 73 CGAACTATCCGATCCACTTGCAAAAAGTGGAACACTTTATCCAAATAT-GAGAGTTTTGC 131 || || || | |||||||||||||||||||||||||||||| || | ||| ||| | Sbjct 73 AGAGGGGTCAGAGCTACTTGCAAAAAGTGGAACACTTTATCCAAAGATCG-GAGCTTTAC 131 Query 132 AAAGAAGTACCTTGGTGATCAAGCAAAAGTAGCAGAAAGGGAAAGAGAGTTTATGGTGGT 191 || ||| |||||| | ||||| |||| ||| | | | || | |||||||||||||| Sbjct 132 AAGGAAACACCTTGCT---CAAGCCAAAGCAGCGGCA-GC-AAGG-GAGTTTATGGTGGT 185 Query 192 CATGATGATGAATTTT-AGGGTTTATTTGATGAG-AGTTAATCTTCAAAACAATGTTGAA 249 |||| ||||| ||||| ||| ||||||||||| | | | ||||| || || | ||||| Sbjct 186 CATGGTGATGGATTTTCAGG-TTTATTTGATGGGCA-TCAATCTCCATAAGGACGTTGAC 243 Query 250 TCATCATGTATAAAGCG-TGAAGCTGAACTTATTAGCTTAG--G-TG--A-TGAAGTTGA 302 || | | ||||| || | ||| | ||||||||||||||| | | | | |||| || Sbjct 244 GCAAC-T--ATAAA-CGGTCAAGGTAAACTTATTAGCTTAGACGATTCCAATCAAGTCGA 299 Query 303 TATATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAA 362 ||||||| | |||| |||||| ||| ||||| | ||||||||| | || |||||| Sbjct 300 TATATCTTACGTCTATCACTGCGACAGTTTAGTCTTATGCATC--C--CA--AAAGACTG 353 Query 363 -GACTAGGCTCGTGGTTTGGAACCCGTATTGGGGACATACC 402 | ||||||| || |||||||| ||||||||||| || ||| Sbjct 354 CG-CTAGGCTTGTTGTTTGGAATCCGTATTGGGGCCAAACC 393 > AT5G36200.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:14244106-14246296 REVERSE LENGTH=1416 Length=1416 Score = 135 bits (73), Expect = 7e-31 Identities = 235/309 (76%), Gaps = 28/309 (9%) Strand=Plus/Plus Query 804 GATGGAGATCTGGATTACGTCTAAGATTGAGCCCAACGTGGTGTCGTGGAACAGCAAGGT 863 ||||||||| ||| ||||| ||||||||||||| || | ||| || ||| | | |||| | Sbjct 870 GATGGAGATTTGGGTTACGACTAAGATTGAGCCTAAGGAGGTCTCATGG-A-A-CAAGTT 926 Query 864 GTTCTTATCAG-TGAGTATaaaaaaaCTCATTGCCCCT-CAGTTTCAG-TTT-TACTTGG 919 ||||||| | | ||| ||| | | ||| | | | || | |||||| ||| || | | Sbjct 927 GTTCTTAGCGGTTGA-TATGATACCACTGA-T--CACTGC-TTTTCAGTTTTGTA-AT-G 979 Query 920 GGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCT-GTGGTTTTTGATAAATACTACAAC 978 |||||| |||||||||||| ||||||| |||| | |||||| ||| |||| | | Sbjct 980 TGAGTTTTTTCATTGACGAGAAGAAGAATGTCG-TCGTGGTTCTTGGTAAAGA-TGTGTT 1037 Query 979 G-AT-CGGCGCAGCATAGCTTACATCATTGG-AGTGGATGGATCCTTCAAAGC-AGTGGA 1034 | || | || | ||||||| | || ||||| | | ||||||| ||| ||| | |||||| Sbjct 1038 GAATAC-ACGAAACATAGCTAATATTATTGGAAAT-GATGGATACTTTAAA-CAAGTGGA 1094 Query 1035 TCTCGGAGAATCGGCATACGCAAT-GTGTTACCCACTTGTGTGCTCTTATGTTCCAAGTA 1093 ||| |||||||| || || ||| ||||||||||||||||||||||||||||||||| Sbjct 1095 TCTTGGAGAATCTACAAAC-AAATATTGTTACCCACTTGTGTGCTCTTATGTTCCAAGT- 1152 Query 1094 T-AGTGCAA 1101 | ||||||| Sbjct 1153 TCAGTGCAA 1161 > AT4G10740.1 | Symbols: | F-box and associated interaction domains-containing protein | chr4:6617143-6618426 REVERSE LENGTH=1284 Length=1284 Score = 75.0 bits (40), Expect = 1e-12 Identities = 145/193 (75%), Gaps = 18/193 (9%) Strand=Plus/Plus Query 921 GAGTTTCTTCATTGACGA-GGAGAAGAAAGTCGCTGTGGTTTTTGAT----AAATACTAC 975 |||||||||||||||| | |||||||||||| ||| ||||||||||| ||| | | Sbjct 1002 GAGTTTCTTCATTGAC-ATGGAGAAGAAAGTTGCTATGGTTTTTGATAAAGAAAAAGGAA 1060 Query 976 AACGA-TCG-GCGCAGCA-TAGCTT-ACATCATTGGAGTGGATGGATCCTTCAAAG-CAG 1030 || | ||| | || || || || | |||||||||| || ||||| | | | | | Sbjct 1061 AAAAAGTCGCTCACAACATTA--TTAATATCATTGGAGAGGCTGGATGCGT-GAGGAAAT 1117 Query 1031 TGGATCTCGGAGAATC-GGCATACGCAATG-TGTTACCCACTTGTGTGCTCTTATGTTCC 1088 ||| ||| |||||| || | || || | |||| ||||||||||||||||||||||| Sbjct 1118 TGGTTCTTAAAGAATCTGG-AGAC-AAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCC 1175 Query 1089 AAGTATAGTGCAA 1101 ||||| ||||||| Sbjct 1176 AAGTACAGTGCAA 1188 > AT3G23680.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:8526366-8527173 REVERSE LENGTH=708 Length=708 Score = 73.1 bits (39), Expect = 5e-12 Identities = 142/188 (76%), Gaps = 22/188 (12%) Strand=Plus/Plus Query 922 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGT-GGTTTTTGATAAATACTACAACGA 980 |||||||||||||||||||||||||||||||| | |||||| || | || | | || Sbjct 430 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT-GA-AGATGGGA-ATCG- 485 Query 981 TCGGCGCAGCATAGCTTA-CATCATTGGAGTGGATGGATCCTTCAAAGCAGTGGATCTCG 1039 | | || || | ||| ||||||||||| || ||||| ||| | ||| ||||||||| Sbjct 486 -C--CACA-CA-A--TTAACATCATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCG 538 Query 1040 --G-AGA--ATCGGCATACGCAATG-TGTTACCCACTTGTGTGCTCTTATGTTCCAAGTA 1093 | ||| || || | || ||| | ||| | || | |||||||||||||||||||| Sbjct 539 TTGGAGATTAT-GG-AGAC-CAAAGATGTAAGACAGATCTGTGCTCTTATGTTCCAAGTT 595 Query 1094 TAGTGCAA 1101 |||||||| Sbjct 596 TAGTGCAA 603 > AT3G04250.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:1121950-1122828 FORWARD LENGTH=879 Length=879 Score = 73.1 bits (39), Expect = 5e-12 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 919 GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT 966 ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 538 GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCTCCATGGTTTTTGAT 585 > AT5G60560.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:24345949-24347172 FORWARD LENGTH=1125 Length=1125 Score = 67.6 bits (36), Expect = 2e-10 Identities = 38/39 (97%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 922 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTT 960 |||||||||||||||||||||||||||||||| |||||| Sbjct 934 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCGTGGTT 972 > AT3G25090.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:9140039-9141094 REVERSE LENGTH=978 Length=978 Score = 67.6 bits (36), Expect = 2e-10 Identities = 43/46 (93%), Gaps = 2/46 (4%) Strand=Plus/Plus Query 922 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGC-TGTGGTTTTTGAT 966 |||||||||||||||||||||||||||||||| | ||||||| ||| Sbjct 742 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCTTTGGTTTT-GAT 786 > AT2G28280.1 | Symbols: | pseudogene, hypothetical protein | chr2:12054736-12056452 REVERSE LENGTH=1717 Length=1717 Score = 67.6 bits (36), Expect = 2e-10 Identities = 154/205 (75%), Gaps = 31/205 (15%) Strand=Plus/Plus Query 920 GGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT--A-A-ATACT-- 973 ||||||||||| |||||||||||||||| ||||| || ||| ||||| | | ||| | Sbjct 1365 GGAGTTTCTTCGTTGACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGAGATAATAG 1424 Query 974 AC-AACG--A---T--CG-GCGCAGCATAGCTTACATCATTGG-AGTGGATGG-ATCCTT 1022 || || | | | || |||| || |||||||||||||| | | |||| || ||| Sbjct 1425 ACAAATGTCACCTTCCCGCTCGCAATATTGCTTACATCATTGGAAAT-AATGGAAT-CTT 1482 Query 1023 CA--AAGCAGTGGATCTCGGAGAATCGGCATACG-CAA--TGTGTTACCCACTTGTGTGC 1077 | || ||||||||| || ||||| | | | ||| | |||||||||||||||||| Sbjct 1483 GAGTAA--AGTGGATCTTGGCGAATC--TAGA-GACAAGTTTTGTTACCCACTTGTGTGC 1537 Query 1078 TCTTATGTTCCAAG-TATAGTGCAA 1101 |||||||||||||| | ||||||| Sbjct 1538 TCTTATGTTCCAAGCTC-AGTGCAA 1561 > AT1G67455.1 | Symbols: | F-box and associated interaction domains-containing protein | chr1:25268145-25269475 FORWARD LENGTH=651 Length=651 Score = 58.4 bits (31), Expect = 1e-07 Identities = 36/38 (95%), Gaps = 1/38 (3%) Strand=Plus/Plus Query 360 CAAGACTAGGCTCGTGGTTTGGAACCCGTATT-GGGGA 396 ||| |||||||||||||||||||||||||||| ||||| Sbjct 174 CAACACTAGGCTCGTGGTTTGGAACCCGTATTTGGGGA 211 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54417390780 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5