BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg342752
Length=1428
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04090.1 | Symbols: | MATE efflux family protein | chr2:136... 2185 0.0
AT2G04100.1 | Symbols: | MATE efflux family protein | chr2:137... 1960 0.0
AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:133... 708 0.0
AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein... 702 0.0
> AT2G04090.1 | Symbols: | MATE efflux family protein | chr2:1362653-1364690
REVERSE LENGTH=1434
Length=1434
Score = 2185 bits (1183), Expect = 0.0
Identities = 1352/1433 (94%), Gaps = 14/1433 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTAAAGTCAACG 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTCAAGTCAACG 60
Query 61 CCGACATGGAGGATGGATTTTACGGCGGAGCTGAAGAACGTCAGCCGC-ATGGCAGCGTC 119
||||||||| ||||| |||||||||||||||||||||||||||| | | ||||| ||| |
Sbjct 61 CCGACATGGTGGATGAATTTTACGGCGGAGCTGAAGAACGTCAG-CTCTATGGCGGCGCC 119
Query 120 TATGGCCACAGTGACCGTGGCTCAATATCTATTGCCCGTTATCTCGGTCATGGTCGCCGG 179
||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 120 TATGGCCACCGTGACAGTGTCTCAATATCTATTGCCCGTGATCTCGGTCATGGTCGCCGG 179
Query 180 CCACCGCGGTGAACTCCAGCTGTCTGGTGTCGCTCTTGCCACTGCTTTCGCTAACGTCTC 239
|||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 180 CCACTGCGGTGAACTCCAGCTGTCTGGTGTCACTCTTGCCACTGCTTTCGCAAACGTCTC 239
Query 240 AGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299
Query 300 TGGAGCAAAACAATACGA-TAAAATAGGAACTTACACTTACTCTGCAATAGTCTCAAACG 358
|||||||||||||||| | |||||| ||||||||||||| ||||||||||||||||||||
Sbjct 300 TGGAGCAAAACAATAC-ACTAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACG 358
Query 359 TACCCATTTG-TCTTCTCATATCTATCCTCTGGTTTTACATGGACAAACTC-TTGATTTC 416
|||| | | | | |||||||||| || |||||||||||||||||||||||| ||| ||||
Sbjct 359 TACCTA-TAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTC 416
Query 417 AATCGGACAAGACCCTGACATCTCCAAGGTAGCTGGTTCCTATGCGGTTTGTCTTATACC 476
| | |||||||| |||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 417 ACTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACC 476
Query 477 GGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTT 536
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GGCATTGTTAGCTCAAGCAGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTT 536
Query 537 GGTTCTTCCTCTTCTCTACTGTGCCATAACTACCCTTTTGTTCCATATACCCGTTTGTTT 596
|||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 537 GGTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTATTCCATATACCAGTTTGTTT 596
Query 597 GACTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTCTC 656
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 597 GATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTC 656
Query 657 TTACTGGTTTAATGTCTTAATTCTTGCTTTATATGTGAGATTTTCAAGATCTTGCGAGAA 716
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 657 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAGAA 716
Query 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGCGTCAAGCAGTTTTTTCAGTATGG 776
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 776
Query 777 GATACCATCAGCAGCAATGACTACCATCGAATGGTCGTTGTTTGAGCTCCTTATATTGTC 836
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||
Sbjct 777 GATACCATCAGCAGCAATGACAACCATAGAATGGTCGTTGTTTGAGCTCCTTATCTTATC 836
Query 837 CTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 TTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896
Query 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956
Query 957 AAACGAATTGGGAGCGGGGAATCCCGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTTT 1016
|||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct 957 AAACGAATTGGGAGCGGGAAATCCGGAGGTTGCTAGGCTGGCAGTGTTTGCCGGTATTTT 1016
Query 1017 CCTGTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCACGTGCAAAAATATCTT 1076
||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 1017 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTGTTCACTTGCAAAAATATTTT 1076
Query 1077 CGGGTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCTCT 1136
|| || || ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1077 TGGCTACGCGTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCGCT 1136
Query 1137 GCTTTGTCTCTCATTTATGGTTGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1137 GCTTTGTCTTTCATTTATGGTCGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196
Query 1197 AAGTGGGTGGCAAAATATTGGCGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1197 AAGTGGGTGGCAAAATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256
Query 1257 TCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATTGG 1316
||| |||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||
Sbjct 1257 TCCTGTTGGATTTTTCTTAGGATTTTGGGGTCATATGAACGGCAAAGGGCTATGGATTGG 1316
Query 1317 TGTGGTCGTTGGGTCTA-TGGCTCAAGGCATCATACTAGCTATAGTTACTGCTTGCATGA 1375
|||| |||||||||| | || ||||||| ||||||||||||||||| ||||||||| |||
Sbjct 1317 TGTGATCGTTGGGTCCACTG-CTCAAGGGATCATACTAGCTATAGTCACTGCTTGCCTGA 1375
Query 1376 GTTGGGAGGAGCAGGCTGCCAAGGC-A-AGAATACGGATAGTTGGAAGAACAT 1426
||||||||||||||||||||||||| | |||| | | ||||||||||||||||
Sbjct 1376 GTTGGGAGGAGCAGGCTGCCAAGGCCAGAGAA-A-GAATAGTTGGAAGAACAT 1426
> AT2G04100.1 | Symbols: | MATE efflux family protein | chr2:1376890-1379130
REVERSE LENGTH=1661
Length=1661
Score = 1960 bits (1061), Expect = 0.0
Identities = 1307/1428 (92%), Gaps = 8/1428 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTAAAGTCAACG 60
|||||||||||||||||||||||||| ||||| ||||||| ||| || ||| | |||
Sbjct 80 ATGGAAGATCCACTTTTATTGGGAGACAATCAGATAATCACCGGAAGTCTTAAGCCGACG 139
Query 61 CCGACATGGAGGATGGATTTTACGGCGGAGCTGAAGAACGTCAGCCGCATGGCAGC-GTC 119
||||||||||||||| |||| ||||||||||| |||||| ||||||||||||| || | |
Sbjct 140 CCGACATGGAGGATGAATTTCACGGCGGAGCTCAAGAACCTCAGCCGCATGGC-GCTGCC 198
Query 120 TATGGCCACAGTGACCGTGGCTCAATATCTATTGCCCGTTATCTCGGTCATGGTCGCCGG 179
||||||||| ||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 199 TATGGCCACCGTGACTGTTGCTCAATATCTATTACCCGTTATCTCAGTCATGGTCGCCGG 258
Query 180 CCACCGCGGTGAACTCCAGCTGTCTGGTGTCGCTCTTGCCACTGCTTTCGCTAACGTCTC 239
||||||| | ||||||||||| || || || |||||||||||| |||| | ||||| ||
Sbjct 259 CCACCGCAGCGAACTCCAGCTCTCAGGCGTTGCTCTTGCCACTTCTTTTACAAACGTATC 318
Query 240 AGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299
|||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 319 CGGCTTCAGTGTCATGTTTGGTTTAGCGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 378
Query 300 TGGAGCAAAACAATACGATAAAATAGGAACTTACACTTACTCTGCAATAGTCTCAAACGT 359
||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct 379 TGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACGT 438
Query 360 ACCCATTTG-TCTTCTCATATCTATCCTCTGGTTTTACATGGACAAACTC-TTGATTTCA 417
||| | | | | |||||||||| || |||||||||||||||||||||||| ||| |||||
Sbjct 439 ACCTA-TAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTCA 496
Query 418 ATCGGACAAGACCCTGACATCTCCAAGGTAGCTGGTTCCTATGCGGTTTGTCTTATACCG 477
| |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 497 CTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACCG 556
Query 478 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 616
Query 538 GTTCTTCCTCTTCTCTACTGTGCCATAACTACCCTTTTGTTCCATATACCCGTTTGTTTG 597
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 617 GTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTGTTCCATATACCAGTTTGTTTG 676
Query 598 ACTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTCTCT 657
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 677 ATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTCT 736
Query 658 TACTGGTTTAATGTCTTAATTCTTGCTTTATATGTGAGATTTTCAAGATCTTGCGAGAAG 717
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 737 TACTGGTTTAACGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGTTCTTGCGAGAAG 796
Query 718 ACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGCGTCAAGCAGTTTTTTCAGTATGGG 777
|||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 797 ACTCGCGGCTTTGTGTCTGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGGA 856
Query 778 ATACCATCAGCAGCAATGACTACCATCGAATGGTCGTTGTTTGAGCTCCTTATATTGTCC 837
||||| || ||||||||||| ||||| || ||||| ||||||||| |||||||||| ||
Sbjct 857 ATACCTTCGGCAGCAATGACAACCATAGAGTGGTCATTGTTTGAGTTCCTTATATTATCT 916
Query 838 TCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACA 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 917 TCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACC 976
Query 898 TCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTCA 957
||||||||||||| |||||||||||||||||| ||||| |||||||| | |||| |||||
Sbjct 977 TCATCTCTCCACTATGTCATTCCAATGGGTATTGGGGCGGCTGGAAGTATACGGGTTTCA 1036
Query 958 AACGAATTGGGAGCGGGGAATCCCGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTTTC 1017
||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||
Sbjct 1037 AACGAATTGGGAGCGGGTAATCCCGAGGTTGCGAGGCTGGCAGTGTTTGCCGGTATATTC 1096
Query 1018 CTGTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCACGTGCAAAAATATCTTC 1077
|| |||||||||||||||||||||||||||||||||||||||| || | | ||||||||
Sbjct 1097 CTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCATTTGTAGAGATATCTTC 1156
Query 1078 GGGTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCTCTG 1137
|| || ||||| |||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct 1157 GGCTACGCCTTTAGCAATAGCAAAGAAGTTGTGGACTATGTCACAGAGCTATCTCCTTTG 1216
Query 1138 CTTTGTCTCTCATTTATGGTTGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGGA 1197
|||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1217 CTTTGTATCTCATTTTTGGTTGATGGATTTTCTGCAGTGCTTGGTGGGGTTGCTAGGGGA 1276
Query 1198 AGTGGGTGGCAAAATATTGGCGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGCT 1257
||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1277 AGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGCT 1336
Query 1258 CCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATTGGT 1317
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1337 CCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAATGGTAAAGGGCTATGGATCGGT 1396
Query 1318 GTGGTCGTTGGGTCTATGGCTCAAGGCATCATACTAGCTATAGTTACTGCTTGCATGAGT 1377
||||| |||||||||| ||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct 1397 GTGGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATAGTCACTGCTTGCATGAGT 1456
Query 1378 TGGGAGGAGCAGGCTGCCAAGGCAAGA-ATACGGATAGTTGGAAGAAC 1424
||| | ||||||||||||||||||||| | | | ||||||| ||||||
Sbjct 1457 TGGAACGAGCAGGCTGCCAAGGCAAGACAGA-GAATAGTTGTAAGAAC 1503
> AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:1337386-1339270
REVERSE LENGTH=1431
Length=1431
Score = 708 bits (383), Expect = 0.0
Identities = 1042/1352 (77%), Gaps = 78/1352 (6%)
Strand=Plus/Plus
Query 88 GAGCTGAAGAACGTCAGCCGCATGGCAGCGT-CTATGGCCACAGTGACCGTGGCTCAATA 146
||||||||||| || ||| || |||| || | |||||||| | |||||| | ||||| ||
Sbjct 79 GAGCTGAAGAAAGTGAGCAGCTTGGCCGC-TCCTATGGCCGCCGTGACCATTGCTCAGTA 137
Query 147 TC-TATTGCCCGTTATCTCGGTCATGGTCGCCGGCCACCGCGGTGAACTCCAGCTGTCTG 205
| ||||||| || || || ||||||||||| |||||| ||||| |||||||| || |
Sbjct 138 -CTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATGGTGAGCTCCAGCTCTCCG 196
Query 206 GTGTCGCTCTTGCCA-CTGCTTTCGCTAACGTCTCAGGCTTCGGCATCATGTATGGTTTA 264
| ||||||||||| | || | ||| | ||||| || || ||| | || ||| ||| |||
Sbjct 197 GCGTCGCTCTTGCAACCT-CCTTCACAAACGTTTCCGGGTTCAGTATTTTGTTTGGGTTA 255
Query 265 GTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATACGATAAAATA 324
| ||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 256 GCGGGTGCACTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATACGAAAAAATC 315
Query 325 GGAACTTACACTTACTCTGCAA-TAGTCTCAAACGTACCC-ATTTGTCTTCTCATATCTA 382
||||| ||||| |||||||||| | | ||| ||| | ||| || ||| | |||||||| |
Sbjct 316 GGAACCTACACATACTCTGCAACT-GCCTCTAACAT-CCCTATATGTGTCCTCATATC-A 372
Query 383 -TCCTCTGGTTTTACATGGACAAA-CTCTTGATTTCAATCGGACAAGACCCTGACATCTC 440
| |||||| ||||||| || ||| ||||| || || |||| ||||||||||||||||
Sbjct 373 GTTCTCTGGATTTACATCGA-AAAGCTCTTAATCTCTCTCGGTCAAGACCCTGACATCT- 430
Query 441 CAAG-GTAGCTGGTTCCTATGCGGTT-TGTCTTATACCGGCATTGTTAGCTCAAGCGGTG 498
| || || ||||| |||||||| || || || |||||||| ||||| || || || ||
Sbjct 431 CTAGAGTCGCTGGCTCCTATGC-CTTGTGGCTCATACCGGCTTTGTTCGCCCATGC-GTT 488
Query 499 CAACA-ACCTTTGACTCGGTTTCT-CCAGACTC-AGGGTTTGGTTCTTCCTCTTCTCTAC 555
|| || ||||||||||||| | || | | |||| ||||||||||| || ||||||
Sbjct 489 TTTCATCCCACTGACTCGGTTTCTGCTAG-CACAAGGG-TTGGTTCTTCCACTGCTCTAC 546
Query 556 TGTGCCATAACTACCCTTTTGTTCCATATACCC-GTTTGTTTGACTCTGGTTTACGCGTT 614
||| || | || || ||||||||||| || ||| ||||| | | || | |||||||||||
Sbjct 547 TGTACCCTGACCACTCTTTTGTTCCACAT-CCCTGTTTGCTGGGCTTTTGTTTACGCGTT 605
Query 615 TGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTCTCTTACTGGTT-TAATGTCT 673
|||||| |||||||||||||| ||| |||||||| || | |||| |||||| | |||| |
Sbjct 606 TGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTCTTTCTGGTTCT-ATGT-T 663
Query 674 -TAATTCT-TGC-TTTATATGTGAGATTTTCAAGATCTTGCGAGAAGACTCGCGGCTTTG 730
| ||||| | | | | |||||||| | || || || ||||| |||||||||| ||||
Sbjct 664 GTGATTCTCT-CATGT-TATGTGAGGTACTCCAGCTCCTGCGACAAGACTCGCGTATTTG 721
Query 731 TATCCGA-TGATTTCGTGT-TGAGCGTCAAGCAGTTTTTTCAGTATGGGA-TACCATCAG 787
||||| | ||||||||||| | | |||||||||| || || | | ||| | |||||||
Sbjct 722 TATCC-AGTGATTTCGTGTCT-TGTATCAAGCAGTTCTTCCACT-TCGGAGTCCCATCAG 778
Query 788 CAGCAAT-GACTACCATCGAATGGTCGTTGTTTGAGCTCCTTATA-T-TGTCCTCAGGAC 844
| ||||| | | || | ||||||| | | |||||||| || ||| | ||| ||||| |
Sbjct 779 CGGCAATGGTTTGCC-TAGAATGGTGGCTATTTGAGCTACTCATACTCTGT--TCAGGTC 835
Query 845 TCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACATCATCTC 904
| ||||||||||||||||||||||||||||||||||| ||||||||||||||| || |
Sbjct 836 TTCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAGTT 895
Query 905 TCCACTGTGTCATTCCAA-TGG-GTATCGG-GGCTGCTGGAAGCACACG-GATTTCAAAC 960
| |||| ||| |||||| ||| || ||| ||||| || | ||||||| | | ||||||
Sbjct 896 TGCACTATGTGATTCCAGGTGGAGTCGCGGCGGCTG-TG-A-GCACACGCG-TGTCAAAC 951
Query 961 GAATTGGGAGCGGGGAATCC-CGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTT-TCC 1018
|||||||||| |||| ||| | || |||||||| | |||| || || || ||| ||
Sbjct 952 AAATTGGGAGCTGGGATTCCTCAAG-TTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTC- 1009
Query 1019 TGTGG-TTCCTAGAGGCTACCATT-TGTAGCACACTTCTCTTCACGTGCAAAAATATCT- 1075
| ||| || ||||| | | | || | |||||||||||||||||| ||| ||| || |
Sbjct 1010 TCTGGCTTG-TAGAGTC-AGCTTTCTTTAGCACACTTCTCTTCACATGCCGAAACAT-TA 1066
Query 1076 TCGGGTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCTC 1135
| || || || |||||||| ||||||||||||||||||||||| | | ||| || ||
Sbjct 1067 TAGGCTACGCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTAACCTAACTCCTT 1126
Query 1136 TGCTTTGTCTCTCATTTATGGTTGATGGATTTT-CTTCAGTGCTTGA-TGGGGTTGCTAG 1193
|||| || ||||| ||||| | || || ||| | |||| || || ||||||||| ||
Sbjct 1127 TGCTCTGCCTCTCCTTTATCCTCGACGG-TTTCACAGCAGTTCT-GAATGGGGTTGCAAG 1184
Query 1194 GGGAAGTGGGTGGCAAAATATTGGCGCTTGGG-CAAATGTGGTGGCTTACTATCTCCTAG 1252
||||||||| |||||| | ||||| |||| | ||| ||||| ||||| ||||| |||
Sbjct 1185 GGGAAGTGGTTGGCAACACATTGGAGCTTTGAACAAC-GTGGTAGCTTATTATCTTGTAG 1243
Query 1253 GAGCTCCGGTTGGACTTTTCTTAGGATTTTGGT-GTCACATGAACGGTAAAGGGCTATGG 1311
||||||| |||||| | | ||||| ||| | || | ||||||| ||||| || |||
Sbjct 1244 GAGCTCCTGTTGGAGTATACTTAGC-TTTCAATCGTGAGTTGAACGGAAAAGGACTTTGG 1302
Query 1312 AT-TGGTGTGGTCGTTGGGTCTA-TG-GCTCAAGGCATCATACTAGCTATAGTTACTGCT 1368
| |||||| || || || || || || ||| ||| ||| | ||| | || || |||
Sbjct 1303 -TGTGGTGTTGTGGTCGGATCCGCTGTGC--AAGCCATAATATTGGCTTTTGTCACAGCT 1359
Query 1369 TGCATGAGTTGGGAGGAGCAGGCTGCCAAGGC 1400
| ||| | |||| |||| ||||||| |||||
Sbjct 1360 TCCATAAATTGGAAGGAACAGGCTGAGAAGGC 1391
> AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein
| chr2:1334512-1336489 REVERSE LENGTH=1542
Length=1542
Score = 702 bits (380), Expect = 0.0
Identities = 1041/1353 (77%), Gaps = 74/1353 (5%)
Strand=Plus/Plus
Query 88 GAGCTGAAGA-ACGTCAGCCGCATGGCAGCGT-CTATGGCCACAGTGACCGTGGCTCAAT 145
||||| |||| | || |||||| |||| || | |||||||||| |||||| | ||||| |
Sbjct 88 GAGCTAAAGAGA-GTGAGCCGCTTGGCCGC-TCCTATGGCCACTGTGACCATTGCTCAGT 145
Query 146 ATC-TATTGCCCGTTATCTCGGTCATGGTCGCCGGCCACCGCGGTGAACTCCAGCTGTCT 204
| | ||||||| || ||||||||||||||||| |||||| ||| || |||||||| ||
Sbjct 146 A-CTTATTGCCTGTCATCTCGGTCATGGTCGCTGGCCACAACGGCGAGCTCCAGCTCTCC 204
Query 205 GGTGTCGCTCTTGC-CACTGCTTTCGCTAACGTCTCAGGCTTCGGCATCATGTATGGTTT 263
|||||||||||||| ||| | ||| | |||||| | || || |||| |||| ||| ||
Sbjct 205 GGTGTCGCTCTTGCAAACT-CCTTCACAAACGTCACCGGTTTTAGCATTATGTGTGGATT 263
Query 264 AGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATACGATAAAAT 323
||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct 264 AGTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATATGAAAAAAT 323
Query 324 AGGAACTTACACTTACTCTGCAATAGTC-TCAAACGTACCCATTTGTCTT-CTCATATCT 381
||||||||| | |||||||| || | | || ||| |||| |||||| || ||||||||
Sbjct 324 CGGAACTTACGCATACTCTGCTATTG-CTTCCAACATACCAATTTGT-TTCCTCATATCA 381
Query 382 ATCCTCTGGTTTTACATGGACAAA-CTCTTGATTTCAATCGGACAAGACCCTGACATCTC 440
|| |||||| ||||||| || ||| |||||||||| |||||||||||||||| || |
Sbjct 382 ATTCTCTGGCTTTACATCGA-AAAGATCTTGATTTCTCTCGGACAAGACCCTGAAAT-TT 439
Query 441 CAAG-GTAGCTGGTTCCTATGCGGTTTGTCTTATACCGGCATT-GTTAGCTCAAGCG-GT 497
|||| | ||||| ||||| || |||| ||||||||||| || || || |||||| |
Sbjct 440 CAAGAATCGCTGGCTCCTACGCCTTTTGGCTTATACCGGCTTTATTTGGC-CAAGCGATT 498
Query 498 GCAACA-ACCTTTGACTCGGTTTCT-CCAGACTC-AGGGTTTGGTTCTTCCTCTTCTCTA 554
| || ||| || | |||||||| | | || | |||| |||||| ||||||| ||||
Sbjct 499 G--TCATACCACTGTCCCGGTTTCTGCTA-ACACAAGGG-TTGGTTATTCCTCTGCTCTT 554
Query 555 CTGTGCCATAACTACCCTTTTGTTCCATATACCCGTTTGTTTGACTCTGGTTTACGCGTT 614
| |||| | || |||||||||||||| | ||||||| |||| |||||| | |||
Sbjct 555 CACTGCCGTGACCACCCTTTTGTTCCACGTTTTGGTTTGTTGGACTTTGGTTTTCTTGTT 614
Query 615 TGGTCTTGGAAGCAATGGAGCC-GCCTTGGCTATTGGTTTCTCTTACTGGTTTAATGTCT 673
|||||| ||| | |||||| || ||| |||||| || | |||| ||||||| | | ||
Sbjct 615 TGGTCTGGGATGTAATGGA-CCTGCCATGGCTACAAGTGTGTCTTTCTGGTTTTACG-CT 672
Query 674 -TAATTCT-TGC-TTTATATGTGAGATTTTCAAGATCTTGCGAGAAGACTCGCGGCTTTG 730
| || || | | | | ||||||||||| || || |||||||||||||||||||| ||||
Sbjct 673 GTGATACTCT-CATGT-TATGTGAGATTCTCCAGCTCTTGCGAGAAGACTCGCGGATTTG 730
Query 731 TAT-CCGATGATTTCGTGTTGAGC-GTCAAGCAGTTTTTTCAGTATGGGATACCATCAGC 788
||| |||| ||||| ||| | | |||||||||| || || || || || ||||||||
Sbjct 731 TATCCCGA-GATTTTGTG-TCTTCTATCAAGCAGTTCTTCCAATACGGAATCCCATCAGC 788
Query 789 AGCAATGA-CTACCATCGAATGGTCGTTGTTTGAGCTCCTTATATTGTCCTCAGGACTCC 847
||||||| | | | ||||||| | | |||||| | || ||| | | |||||| || |
Sbjct 789 TGCAATGATTTGTC-TAGAATGGTGGCTATTTGAGATACTCATACTCTGCTCAGGTCTTC 847
Query 848 TCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACATCATCTCTCC 907
|||| ||||||||||||||||||||||||||||| ||||||||||||| | | || | |
Sbjct 848 TCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAATAGAAACTTTGC 907
Query 908 ACTGTGTCATTCCAA-TGG-GTATCGG-GGCTGCTGGAAGCACACG-GATTTCAAACGAA 963
||| ||| ||| || ||| || | | ||||| || | ||||||| | | |||||| ||
Sbjct 908 ACTATGTGATTTCAGCTGGAGTCGCCGCGGCTG-TG-A-GCACACGTG-TATCAAAC-AA 962
Query 964 TT-GGGAGCGGGGAATCC-CGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTT-TCCTG 1020
|| |||||| |||||||| | || |||||||| | |||| || || || ||| || |
Sbjct 963 TTTGGGAGCTGGGAATCCTCAAG-TTGCTAGGGTTTCAGTATTAGCAGGGCTTTGTC-TC 1020
Query 1021 TGGTTCCTAGAGGCTACCATT-TGTAGCACACTTCTCTTCACGTGCAAAAATATCTTCGG 1079
||| | ||||| | | | || | ||||| |||||| ||||| |||| || ||| | ||
Sbjct 1021 TGGATAGTAGAGTC-AGCTTTCTTTAGCATACTTCTATTCACCTGCAGGAACATCATAGG 1079
Query 1080 GTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCA-CGGAGCTATCTTCTCTGC 1138
|| || |||||||| |||||||||||| |||||||||| | | || ||| || || |||
Sbjct 1080 ATACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGT-AGCTGACCTAACTCCTTTGC 1138
Query 1139 TTTGTCTCTCATTTATGGTTGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGGAA 1198
| || ||||| ||||| | || || || | |||| || |||| |||||||||||||
Sbjct 1139 TCTGCCTCTCCTTTATCCTCGACGGCTTCACAGCAGTTCTAAATGGAGTTGCTAGGGGAA 1198
Query 1199 GTGGGTGGCAAAATATTGGCGCTTGGG-CAA-A-TGTGGTGGCTTACTATCTCCTAGGAG 1255
|||| |||||| | ||||| |||||| ||| | ||| | |||| ||||| ||||||
Sbjct 1199 GTGGTTGGCAACACATTGGAGCTTGGAACAATACTGTT-T--CTTATTATCTTGTAGGAG 1255
Query 1256 CTCCGGTTGGACTTTTCTTAGGATTTTGGT-GTCACATGAACGGTAAAGGGCTATGGATT 1314
|||| |||||| ||| ||||| ||| || || | ||||||| ||||| || ||| |
Sbjct 1256 CTCCTGTTGGAATTTACTTAGC-TTTCAGTCGTGAGTTGAACGGAAAAGGACTGTGG-TG 1313
Query 1315 -GGTGTGGTCGTTGGGTCTA-TG-GCTCAAGGCA-TCATACTAGCTATAGTTACTGCTTG 1370
||||| || ||||| |||| || || ||| || | ||||| ||||| || || ||||
Sbjct 1314 CGGTGTTGTGGTTGGATCTACTGTGC--AAGCCACT-ATACTGGCTATTGTCACAGCTTC 1370
Query 1371 CATGAGTTGGGAGGAGCAGGCTGCCAAGGCAAG 1403
||| | |||| |||| ||||||| ||||||||
Sbjct 1371 CATAAATTGGAAGGAACAGGCTGAGAAGGCAAG 1403
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70381164090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5