BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg342754 Length=357 Score E Sequences producing significant alignments: (Bits) Value AT2G04115.1 | Symbols: | Plant self-incompatibility protein S1... 189 2e-47 > AT2G04115.1 | Symbols: | Plant self-incompatibility protein S1 family | chr2:1385449-1386071 FORWARD LENGTH=623 Length=623 Score = 189 bits (102), Expect = 2e-47 Identities = 121/130 (93%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 1 ATGGAGTTTTATTTTAATCTTCAAGTATACAGAGCAGCTGGTACTGAACGATGTGATCAG 60 ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 307 ATGGAGTTTCATTTTAATCTTCAAGTATACAGAGCAGCTGCAACTGAACGATGTAATCAG 366 Query 61 TATCGCTCATGGACTGCTAAACCTGATGGAATTTGGTTTACAAGAGATCGTTCA-AAACC 119 |||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||| Sbjct 367 TATCGCTCATGGACTGCTAAGCCTGATGGAATTTGGTTTAGAAGAGATCGTA-ATAAACC 425 Query 120 GTCGGGACAT 129 |||||||||| Sbjct 426 GTCGGGACAT 435 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16739160417 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5