BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg343054

Length=336
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G14210.1 | Symbols: ANR1, AGL44 | AGAMOUS-like 44 | chr2:601...   534    2e-151


> AT2G14210.1 | Symbols: ANR1, AGL44 | AGAMOUS-like 44 | chr2:6018558-6023863 
FORWARD LENGTH=1096
Length=1096

 Score =  534 bits (289),  Expect = 2e-151
 Identities = 321/336 (96%), Gaps = 3/336 (1%)
 Strand=Plus/Plus

Query  1    ATGAATGCTAATGACCTACAAAATCTTGAAGACCAGCTAGTATCAAGTCTAAAAGGTGTT  60
            ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct  468  ATGAATGCTAACGACCTACAAAACCTTGAAGACCAGCTAGTAACAAGTCTAAAAGGTGTT  527

Query  61   CGTCTCAAAAAGGATCAACTTATGACAGATGAAATCAGAGAACTCAATCGTAAGGGGCAA  120
            ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct  528  CGTCTCAAAAAGGATCAACTTATGACAAATGAAATCAGAGAACTTAATCGTAAGGGACAA  587

Query  121  ATCATCCAAAAAGAGAATCACGAGCTACAAAATATTGTAGATATAATGCGTAAGGAAAAT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  588  ATCATCCAAAAAGAGAATCACGAGCTACAAAATATTGTAGATATAATGCGTAAGGAAAAT  647

Query  181  ATTAAATTGCAAAAGAAGGTTCATGGAAGAACAAATGCGATTGAAGGCAGTTCAAGTGTA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  648  ATTAAATTGCAAAAGAAGGTTCATGGAAGAACAAATGCGATTGAAGGCAATTCAAGTGTA  707

Query  241  GCTCCAATAAGCAATGGAACCGCAACATATGCACCACCGCAACTTCAACTTATACAAGTA  300
            | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||
Sbjct  708  GATCCAATAAGCAATGGAACCACAACATATGCACCACCGCAACTTCAACTCATACAACTA  767

Query  301  CAACC---TCCAAGAGAAAAATCAATCAGACTAGGG  333
            |||||   ||| ||||||||||||||||||||||||
Sbjct  768  CAACCAGCTCCTAGAGAAAAATCAATCAGACTAGGG  803



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 15683537688


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5