BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg343166 Length=477 Score E Sequences producing significant alignments: (Bits) Value AT1G25550.1 | Symbols: | myb-like transcription factor family ... 300 9e-81 AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN ... 193 2e-48 AT5G56010.1 | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 |... 187 7e-47 AT5G56030.2 | Symbols: HSP81-2 | heat shock protein 81-2 | chr5... 182 3e-45 AT1G68670.1 | Symbols: | myb-like transcription factor family ... 106 2e-22 AT1G13300.1 | Symbols: HRS1 | myb-like transcription factor fam... 99.0 4e-20 > AT1G25550.1 | Symbols: | myb-like transcription factor family protein | chr1:8976434-8978093 FORWARD LENGTH=1396 Length=1396 Score = 300 bits (162), Expect = 9e-81 Identities = 275/325 (85%), Gaps = 26/325 (8%) Strand=Plus/Plus Query 132 TGTTGCTACACCTAAACAGATTAGAGATCTCATGAAGGTGAAGGTCGATGGTTTAACTAA 191 ||||||||| ||||| |||||||||||||| | | |||||||||||||||||||||| Sbjct 909 TGTTGCTACGCCTAAGCAGATTAGAGATCT--T--A--TGAAGGTCGATGGTTTAACTAA 962 Query 192 TGACGAAGTTAAAAGCCATTTACAGAAATATAGATTGCACACAAGAAGACCAGCTACTCC 251 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 963 TGACGAAGTTAAAAGTCATTTACAGAAATATAGATTGCATACAAGAAGACCAGCTACTCC 1022 Query 252 GGTAGTAACAAACGGTGGAGAAAATCCACAACAACTACAATTCATGGTGGTGGAAGGAAT 311 |||||||| | |||||| |||||||||||||||| || || |||||| ||||||| || Sbjct 1023 GGTAGTAAGGACCGGTGGTGAAAATCCACAACAACGGCAGTTTATGGTGATGGAAGGCAT 1082 Query 312 TTGGGTGC-TGTCGCACGATACAACGAATAATAGAGTTTACGCTC-TGGTGGCG------ 363 |||||| | | || ||||||||||| ||||||||||||||||||| || ||||| Sbjct 1083 TTGGGTACCT-TCACACGATACAACTAATAATAGAGTTTACGCTCCTG-TGGCGACACAA 1140 Query 364 --GTT-CAATCTTCACCGTCGGGAGAGAGAAGTAGA-CGGCGCTGCAAATCGCC-GACAA 418 | ||||||||| |||||||||||||||| | | ||| | |||||||| || | ||| Sbjct 1141 CCGCCGCAATCTTCAACGTCGGGAGAGAGAAGCA-ATCGGGGTTGCAAATCTCCCG-CAA 1198 Query 419 CATCTTCTAC-AC-ACAC-CACACC 440 |||||||||| || |||| |||||| Sbjct 1199 CATCTTCTACTACTACACACACACC 1223 > AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN 81.4 | chr5:22677451-22680152 REVERSE LENGTH=2336 Length=2336 Score = 193 bits (104), Expect = 2e-48 Identities = 122/131 (93%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 3 GATTAGGTTTGAGTCGTTGACGGACAAGAGCAAGCTCGATGGTCAGCCTGAGCTATTCCT 62 ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| | Sbjct 220 GATTAGGTTCGAGTCCTTGACGGATAAGAGCAAGCTCGATGGTCAGCCTGAGCTTTTCAT 279 Query 63 TCATATCATTCCCGACAAGACTAACAACACCTTGAACATTATCGATAGTGGGATTGGGAT 122 |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 280 TCATATCATTCCGGACAAGACTAACAACACCTTGACCATTATCGATAGTGGTATTGGGAT 339 Query 123 GACTAAGGCTG 133 ||| ||||||| Sbjct 340 GACCAAGGCTG 350 > AT5G56010.1 | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 | heat shock protein 81-3 | chr5:22681305-22684129 FORWARD LENGTH=2423 Length=2423 Score = 187 bits (101), Expect = 7e-47 Identities = 122/132 (92%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 3 GATTAGGTTTGAGTCGTTGACGGACAAGAGCAAGCTCGATGGTCAGCCTGAGCTATTCCT 62 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct 240 GATTAGGTTTGAGTCCTTGACAGACAAGAGCAAGCTCGATGGTCAGCCAGAGCTCTTCAT 299 Query 63 TCATATCATTCCCGACAAGACTAACAACACCTTGAAC-ATTATCGATAGTGGGATTGGGA 121 ||| ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| Sbjct 300 TCACATCATTCCCGACAAGACTAACAACACCTTGA-CGATTATCGATAGTGGTATTGGGA 358 Query 122 TGACTAAGGCTG 133 |||| ||||||| Sbjct 359 TGACCAAGGCTG 370 > AT5G56030.2 | Symbols: HSP81-2 | heat shock protein 81-2 | chr5:22686832-22689471 FORWARD LENGTH=2316 Length=2316 Score = 182 bits (98), Expect = 3e-45 Identities = 120/131 (92%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 3 GATTAGGTTTGAGTCGTTGACGGACAAGAGCAAGCTCGATGGTCAGCCTGAGCTATTCCT 62 |||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||| | Sbjct 313 GATTAGATTCGAGTCCTTGACGGACAAGAGCAAGCTCGATGGTCAGCCTGAGCTCTTCAT 372 Query 63 TCATATCATTCCCGACAAGACTAACAACACCTTGAACATTATCGATAGTGGGATTGGGAT 122 ||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||| || Sbjct 373 TCACATCATTCCCGACAAGACTAACAACACCTTGACCATTATTGATAGTGGTATTGGCAT 432 Query 123 GACTAAGGCTG 133 ||| ||||||| Sbjct 433 GACCAAGGCTG 443 > AT1G68670.1 | Symbols: | myb-like transcription factor family protein | chr1:25782029-25784076 FORWARD LENGTH=1583 Length=1583 Score = 106 bits (57), Expect = 2e-22 Identities = 98/116 (84%), Gaps = 10/116 (9%) Strand=Plus/Plus Query 132 TGTTGCTACACCTAAA-CAGATTAGAGATCTCATGAAGGTGAAGGTCGATGGTTTAACTA 190 |||||||||||| ||| || || || |||| ||||||||| | ||||| ||||| | Sbjct 1032 TGTTGCTACACC-AAAGCAAATCAGGGATCACATGAAGGT-----T-GATGGATTAACAA 1084 Query 191 ATGACGAAGTTAAAAGCCATTTACAGAAATATAGA-TTGCACACAAGAAGACCAGC 245 | ||||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct 1085 ACGACGAAGTTAAAAGCCATTTACAGAAATATAGACTT-CACACAAGAAGGCCAGC 1139 > AT1G13300.1 | Symbols: HRS1 | myb-like transcription factor family protein | chr1:4556892-4558708 FORWARD LENGTH=1237 Length=1237 Score = 99.0 bits (53), Expect = 4e-20 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 170 TGAAGGTCGATGGTTTAACTAATGACGAAGTTAAAAGCCATTTACAGAAATATAGATTGC 229 ||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||| Sbjct 732 TGAAGGTTGATGGGTTAACCAATGATGAAGTTAAAAGCCATTTACAGAAATATAGACTGC 791 Query 230 ACACAAGAAGACCA 243 | |||||||| ||| Sbjct 792 ATACAAGAAGGCCA 805 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22705834444 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5