BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343233
Length=1101
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19670.1 | Symbols: ATPRMT1A, PRMT1A | protein arginine meth... 1679 0.0
AT4G29510.1 | Symbols: ATPRMT11, PRMT11, ATPRMT1B, PRMT1B | arg... 1024 0.0
> AT2G19670.1 | Symbols: ATPRMT1A, PRMT1A | protein arginine methyltransferase
1A | chr2:8499086-8501181 REVERSE LENGTH=1360
Length=1360
Score = 1679 bits (909), Expect = 0.0
Identities = 1042/1106 (94%), Gaps = 10/1106 (1%)
Strand=Plus/Plus
Query 1 ATGACTAGTACGAAGAACAACAACAACGGCTCTGATGAAACTCAGAAGACGAAGTTACAC 60
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 68 ATGACTAGTACGGAGAACAACAACAACGGCTCTGATGAAACTCAGACGACGAAGTTACAC 127
Query 61 TTCGAAGATGCTGATGAATCAATGTACGATGGAGGTGACAACAATGCCGATGTTGCTGAT 120
||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 128 TTCGAGGATGCTGATGAATCAATGCACGATGGAGATGACAACAATGCCGATGTTGCTGAT 187
Query 121 GACATAACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTTGGTATTCATGAAGAA 180
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 188 GACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGTATTCATGAAGAA 247
Query 181 ATGTTAAAAGATGTAGTGAGGACAAAGTGTTATCAAGATGTTATTTACAAGAACAAGTTT 240
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 248 ATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATTTACAAGAACAAGTTT 307
Query 241 CTTATCAAAGACAAGATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTTTGTTT 300
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 308 CTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTCTCTTC 367
Query 301 TGTGCTAAAGCAGGAGCAGCTCACGTTTACGCAGTGGAATGTTCTCAAATGGCTGACACC 360
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 368 TGTGCTAAAGCAGGAGCAGCTCACGTTTACGCAGTTGAGTGTTCTCAAATGGCTGACACA 427
Query 361 GC-AAGAGAGATTGTTAAGTCAAATGGATTTTCGGATGTTATAACGGTTTTGAAAGGGAA 419
|| ||| |||||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct 428 GCAAAG-GAGATTGTTAAGTCGAATGGATTCTCAGATGTTATAACGGTTTTGAAAGGGAA 486
Query 420 GATTGAGGAAATCGAGCTTCCGA-TTCCTAAAGTGGATGTGATTATCTCTGAATGGATGG 478
||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 487 GATTGAGGAGATCGAACTTCC-AGTTCCTAAAGTGGATGTGATTATCTCTGAATGGATGG 545
Query 479 GTTACTTTTTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGC 538
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 546 GTTACTTTCTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGC 605
Query 539 TTGTTGATGGTGGAACTGTTTTACCGGATAAAGCTTCT-TTGTATCTTACAGCCATAGAG 597
||||||||||||||| |||| |||| |||||||||||| || ||| |||| ||||| |||
Sbjct 606 TTGTTGATGGTGGAATTGTTCTACCAGATAAAGCTTCTCTT-TATGTTACTGCCATTGAG 664
Query 598 GATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACGTGTATGGGTTTGACATG 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACGTGTATGGGTTTGACATG 724
Query 658 TCGTGCATCAAGAGAAAAGCGATTACGGAACCGCTTGTTGACACTGTGGACGGAAACCAA 717
|||||||||||||||| ||| ||||| ||||||||||||||||| || || || ||||||
Sbjct 725 TCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACCGTTGATGGTAACCAA 784
Query 718 ATCGTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTTCTGGAGAT 777
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 785 ATCGTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTGCTGGAGAT 844
Query 778 GCTTCCTTCACAGCTCCATTTAAGCTTGTCGCACAACGAAATGACCATATCCATGCCCTT 837
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 845 GCTTCCTTCACAGCTCCGTTTAAGCTCGTCGCACAACGAAATGACCATATCCATGCCCTT 904
Query 838 GTAGCCTACTTTGATGTATCATTCACCATGTGCCACAAGAAGATGGGTTTCTCAACAGGA 897
||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 905 GTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGATGGGTTTCTCAACAGGA 964
Query 898 CCAAAATCTCGGGCGACACACTGGAAACAAACAGTGCTGTACCTGGAAGATGTGTTGACC 957
|| ||||| ||||| || || ||||||||||| ||||||||||||||||||||||| |||
Sbjct 965 CCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTGGAAGATGTGTTAACC 1024
Query 958 ATATGCGAGGGTGAAACAATCACAGGAAGCATGACCATAT-CACAAAACAAAAAGAATCC 1016
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1025 ATATGCGAGGGTGAAACAATCACAGGAAGCATGACCAT-TGCACAAAACAAAAAGAATCC 1083
Query 1017 CAGAGACGTCGACATAAAGCTCAGCTATTCTTTGAACGGCCAACATTGCAAGATCTCAAG 1076
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1084 CAGAGACGTCGACATAAAGCTCAGCTATTCTTTGAACGGCCAACATTGCAATATCTCAAG 1143
Query 1077 GACGCAACT-CTACAAAATGCGCTAA 1101
||| || || ||| || |||||||||
Sbjct 1144 GACCCA-CTTCTATAAGATGCGCTAA 1168
> AT4G29510.1 | Symbols: ATPRMT11, PRMT11, ATPRMT1B, PRMT1B | arginine
methyltransferase 11 | chr4:14491625-14494001 FORWARD
LENGTH=1536
Length=1536
Score = 1024 bits (554), Expect = 0.0
Identities = 850/994 (86%), Gaps = 16/994 (2%)
Strand=Plus/Plus
Query 116 CTGATGACATAACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTTGGTATTCATG 175
||||||| | ||||| ||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 302 CTGATGATACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGAATCCATG 361
Query 176 AAGAAATGTTAAAAGATGTAGTGAGGACAAAGTGTTATCAAGA-TGTTATTTA-CAAGAA 233
|||| ||||| || ||||| ||||| |||||| |||||| || ||||||||| || |||
Sbjct 362 AAGAGATGTTGAAGGATGTTGTGAGAACAAAGACTTATCA-GAATGTTATTTATCA-GAA 419
Query 234 CAAGTTTCTTATCAAAGACAAGATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTC 293
||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 420 CAAGTTTCTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACCGGAATTTTGTC 479
Query 294 TTTGTTTTGTGCTAAAGCAGGAGCAGCTCACGTTTACGCAGTGGAATGTTCTCAAATGGC 353
| |||| ||||| || |||||||| ||||| || ||||| || || ||||||||||||||
Sbjct 480 TCTGTTCTGTGCCAAGGCAGGAGCTGCTCATGTCTACGCTGTTGAGTGTTCTCAAATGGC 539
Query 354 TGACACCGCAAGAG-AGATTGTTAA-GTCAAATGGATTTTCGGATGTTATAACGGTTTTG 411
||||| |||| || |||||||||| | | ||||||||||| |||||||| ||||| |||
Sbjct 540 TGACATGGCAA-AGGAGATTGTTAAAG-CTAATGGATTTTCTGATGTTATTACGGTATTG 597
Query 412 AAAGGGAAGATTGAGGAAATCGAGCTTCCGATTCCTAAAGTGGATGTGATTATCTCTGAA 471
||||||||||||||||| || |||||||| | ||||||||||||||||||||| || |||
Sbjct 598 AAAGGGAAGATTGAGGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCGGAA 657
Query 472 TGGATGGGTTACTTTTTGTTGTATGAAAATATGCTTG-ACACCGTCTTGTATGCTCGCAA 530
|||||||||||||||||||||| |||||||||| ||| ||| |||||||||||||| |
Sbjct 658 TGGATGGGTTACTTTTTGTTGTTTGAAAATATG-TTGGACAGTGTCTTGTATGCTCGTGA 716
Query 531 TAAATGGCTTGTTGATGGTGGAACTGTTTTACCGGATAAAGCTTCTTTGTATCTTACAGC 590
||||||||||||||| |||||| ||| |||| || ||||| ||| || ||||||||||
Sbjct 717 TAAATGGCTTGTTGAAGGTGGAGTTGTGCTACCAGACAAAGCCTCTCTGCATCTTACAGC 776
Query 591 CATAGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGAC-GACGTGTATGGGT 649
|||||||||| | | || ||||| |||||| | || |||||| || | |||||||| |
Sbjct 777 CATAGAGGATTCAGAGTACAAAGAAGACAAAATCGAATTTTGGAACAGT-GTGTATGGTT 835
Query 650 TTGACATGTCGTGCATCAAGAGAAAAGCGATTACGGAACCGCTTGTTGACACTGTGGACG 709
|||||||||| || || |||| |||||| || | |||||| ||||||||||| || |||
Sbjct 836 TTGACATGTCATGTATTAAGAAAAAAGCTATGATGGAACCACTTGTTGACACAGTCGACC 895
Query 710 GAAACCAAATCGTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTT 769
|||||||||||| || ||||| | ||| || ||||| ||||||||||| |||||| | |
Sbjct 896 AAAACCAAATCGTCACCGATAGTAGGCTTCTAAAGACGATGGATATCTCAAAGATGTCCT 955
Query 770 CTGGAGATGCTTCCTTCACAGCTCCATTTAAGCTTGTCGCACAACGAAATGACCATATCC 829
|||| |||||||||||||||||||| ||||||||||| |||||||| |||||| | ||||
Sbjct 956 CTGGTGATGCTTCCTTCACAGCTCCCTTTAAGCTTGTTGCACAACGCAATGACTACATCC 1015
Query 830 ATGCCCTTGTAGCCTACTTTGATGTATCATTCACCATGTGCCACAAGAAGATGGGTTTCT 889
| |||||||||||||||||||||||||| || ||||||||||||||| | |||| ||||
Sbjct 1016 ACGCCCTTGTAGCCTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTGGGCTTCT 1075
Query 890 CAACAGGACCAAAATCTCGGGCGACACACTGGAAACAAACAGTGCTGTACCTGGAAGATG 949
|||||||||| ||||| || || |||||||||||||||||||| ||||| || |||||||
Sbjct 1076 CAACAGGACCGAAATCCCGAGCTACACACTGGAAACAAACAGTTCTGTATCTAGAAGATG 1135
Query 950 TGTTGACCATATGCGAGGGTGAAACAATCACAGGAAGC-ATGACCATATCACAAAACAAA 1008
|||| |||||||| |||||||| |||||||| |||| | ||| || | || | |||||
Sbjct 1136 TGTTAACCATATGTGAGGGTGAGACAATCACTGGAA-CTATGTCCGTTTCTCCTAACAAG 1194
Query 1009 AAGAATCC-CAGAGACGTCGACATAAAGCTCAGCTATTCTTTGAACGGCCAACATTGCAA 1067
|||||||| | ||||| | ||||||||||| |||||||||||||| ||||| ||||||||
Sbjct 1195 AAGAATCCTC-GAGACATTGACATAAAGCTAAGCTATTCTTTGAATGGCCAGCATTGCAA 1253
Query 1068 GATCTCAAGGACGCAACTCTACAAAATGCGCTAA 1101
|||||||||||| |||| |||||||||||| |||
Sbjct 1254 GATCTCAAGGACCCAACACTACAAAATGCGTTAA 1287
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53965585875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5