BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg343262 Length=1134 Score E Sequences producing significant alignments: (Bits) Value AT2G19330.1 | Symbols: PIRL6 | plant intracellular ras group-re... 1742 0.0 AT2G19340.1 | Symbols: | Oligosaccharyltransferase complex/mag... 1092 0.0 AT4G29880.1 | Symbols: PIRL7 | plant intracellular ras group-re... 848 0.0 > AT2G19330.1 | Symbols: PIRL6 | plant intracellular ras group-related LRR 6 | chr2:8372947-8374453 FORWARD LENGTH=1143 Length=1143 Score = 1742 bits (943), Expect = 0.0 Identities = 1088/1153 (94%), Gaps = 29/1153 (3%) Strand=Plus/Plus Query 1 ATGATATGCGAAGAGGCATATCATCAGCAACCGCAAATACAAAAGGAACAAATGATGACT 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATATGCGAGGAGGCATATCATCAGCAACCGCAAATACAAAAGGAACAAATGATGAC- 59 Query 61 ATGATGATGATGGATCAACGTAGTAATCATCAACGG-A-A-A--A--A--A---TCA-C- 106 |||||||||||||| ||||||||||||| | | | | | | ||| | Sbjct 60 --------GATGGATCAACGTAATAATCATCAACGGAAGAGATCACCATTATCCTCACCA 111 Query 107 -CAT-T--ATCGTCGCCATCATCTCCATCATCACCAAAATCACCATCATTCAATAATAAT 162 ||| | ||| || ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 112 TCATCTCCATCATCACCATCGTCTCCATCATCACCAAAGTCACCATCATTCAATAATAAT 171 Query 163 GAGGAAGAGAGGCTAGAGGTTGTGAATTTGAGTGGGATGGCATTGGAGTCTCTCCCTAAT 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 GAGGAAGAGAGGCTAGAGGTTGTGAATTTGAGTGGGATGGCATTGGAGTCTCTCCCTAAT 231 Query 223 CCTTCACTCAATTTAGCTCAGATTTGCAAGCTTGATCTCTCCAACAATCATCTCCAGACT 282 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 232 CCTTCACTCAATTTAGCTCAGATTTGCAAGCTTGATCTCTCCAATAATCATCTTCAGACC 291 Query 283 ATACCAGAATCATTAACAGCGAGACTACTCAACTTGATAGCATTAGATGTTCACTCAAAT 342 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 ATACCAGAATCACTAACAGCGAGACTACTCAACTTGATAGCATTAGATGTTCACTCAAAT 351 Query 343 CAGATCAAAGCTCTTCCAAACTCCATTGGTTGTCTCTCTAAGCTCAAGACTCTCAATGTC 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 CAGATCAAAGCTCTTCCAAACTCCATTGGTTGTCTCTCTAAGCTCAAGACTCTCAATGTC 411 Query 403 TCCGGCAACTTTCTTGTATCCTTCCCCAAATCTATCCAACATTGCAGGTC-TCTGGAAGA 461 ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| Sbjct 412 TCCGGCAACTTTCTTGTATCCTTTCCCAAATCTATCCAACATTGCAGGTCAT-TGGAAGA 470 Query 462 ACTAAATGCAAACTTCAACAAACTCATCAGATTACCAGACTCCATTGGATTTGAACTCAC 521 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 471 ACTAAATGCAAACTTCAACAAACTAATCAGATTACCAGACTCCATTGGTTTTGAACTCAC 530 Query 522 CAATCTAAGGAAGCTCTCTATCAACTCCAACAAGCTAATTAGTCTTCCACTCTCCATTAC 581 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 531 CAATCTAAGGAAGCTCTCTATCAACTCCAACAAGCTAATTAGTCTTCCAATCTCCATTAC 590 Query 582 TCACCTCACATCTCTCCGTGTCCTCGACGCTCGTCTCAACTGCCTCATGATTCTCCCAGA 641 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || || Sbjct 591 TCACCTCACATCTCTCCGTGTCCTTGACGCCCGTCTCAACTGCCTCATGATTCTACCGGA 650 Query 642 TGATCTCGAGAATCTCATCAACCTCGAGATTCTCAATGTCAGCCAGAATTTCCAGTATCT 701 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 651 TGATCTCGAGAATCTCATCAACCTCGAGATCCTCAATGTCAGCCAGAATTTCCAGTATCT 710 Query 702 TTCCGCTCTTCCATCTTCCATTGGCCTTTTAATGAACCTCATTGAGCTCGATGTTAGCTA 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 711 TTCCGCTCTTCCATCTTCCATTGGCCTTTTAATGAACCTCATTGAGCTCGATGTTAGCTA 770 Query 762 CAACAAGATCACTGTATTACCTGAGTCCATTGGCTGCATGAGAAGGTTAAGGAAGCTGAG 821 ||||||||||||||| || || ||||||||||||||||||||| |||||||||||||||| Sbjct 771 CAACAAGATCACTGTCTTGCCAGAGTCCATTGGCTGCATGAGACGGTTAAGGAAGCTGAG 830 Query 822 TGTTGAAGGAAACCCGCTCGTGTCCCCGCCCATCGAGGTGATGGAGCAGAATCTGCAGGT 881 |||||||||||||||||| ||||| || ||||| |||||||||||||||||| ||||||| Sbjct 831 TGTTGAAGGAAACCCGCTTGTGTCGCCACCCATAGAGGTGATGGAGCAGAATTTGCAGGT 890 Query 882 GGTGAGAGAGTATCTGACACAAAAGATGAATGGAGGCTCACCAAGGAGTCCAAGCAAAAA 941 ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct 891 GGTGAGAGAGTATCTGACACAGAAGATGAATGGTGGCTCACCAAGGAGTCCCAGCAAAAA 950 Query 942 GAAGTCTTGGGGATTCGGTAAATTGGTGAAGTATGGGACGTTCAATGGCGGATCAAGAAG 1001 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 951 GAAGTCATGGGGATTCGGTAAATTGGTGAAGTATGGGACGTTCAATGGCGGATCAAGAAG 1010 Query 1002 CTGGAATAGAGAGGAGAGGGAAGGGTTTATCATGCCTGAGTACCGCGCCATCGACAGTCT 1061 |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| Sbjct 1011 CTGGAATAGAGAGGAGAGAGAAGGGTTCATCATGCCTGAGTACCGCTCCATCGACAGTCT 1070 Query 1062 TGCTTCGCCTAGGTATTCTGGAATGTTCTCTCCACGCCGTCTCTTTTCTCCAAGAACCTA 1121 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1071 TGCTTCGCCTAGGTATTCTGGAATGTTCTCTCCACGTCGTCTCTTTTCTCCAAGAACCTA 1130 Query 1122 TTTCAGCAGATAA 1134 ||||||||||||| Sbjct 1131 TTTCAGCAGATAA 1143 > AT2G19340.1 | Symbols: | Oligosaccharyltransferase complex/magnesium transporter family protein | chr2:8373766-8375809 REVERSE LENGTH=1164 Length=1164 Score = 1092 bits (591), Expect = 0.0 Identities = 646/673 (96%), Gaps = 2/673 (0%) Strand=Plus/Minus Query 447 CAGGTC-TCTGGAAGAACTAAATGCAAACTTCAACAAACTCATCAGATTACCAGACTCCA 505 |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1164 CAGGTCAT-TGGAAGAACTAAATGCAAACTTCAACAAACTAATCAGATTACCAGACTCCA 1106 Query 506 TTGGATTTGAACTCACCAATCTAAGGAAGCTCTCTATCAACTCCAACAAGCTAATTAGTC 565 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1105 TTGGTTTTGAACTCACCAATCTAAGGAAGCTCTCTATCAACTCCAACAAGCTAATTAGTC 1046 Query 566 TTCCACTCTCCATTACTCACCTCACATCTCTCCGTGTCCTCGACGCTCGTCTCAACTGCC 625 ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1045 TTCCAATCTCCATTACTCACCTCACATCTCTCCGTGTCCTTGACGCCCGTCTCAACTGCC 986 Query 626 TCATGATTCTCCCAGATGATCTCGAGAATCTCATCAACCTCGAGATTCTCAATGTCAGCC 685 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 985 TCATGATTCTACCGGATGATCTCGAGAATCTCATCAACCTCGAGATCCTCAATGTCAGCC 926 Query 686 AGAATTTCCAGTATCTTTCCGCTCTTCCATCTTCCATTGGCCTTTTAATGAACCTCATTG 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 AGAATTTCCAGTATCTTTCCGCTCTTCCATCTTCCATTGGCCTTTTAATGAACCTCATTG 866 Query 746 AGCTCGATGTTAGCTACAACAAGATCACTGTATTACCTGAGTCCATTGGCTGCATGAGAA 805 ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct 865 AGCTCGATGTTAGCTACAACAAGATCACTGTCTTGCCAGAGTCCATTGGCTGCATGAGAC 806 Query 806 GGTTAAGGAAGCTGAGTGTTGAAGGAAACCCGCTCGTGTCCCCGCCCATCGAGGTGATGG 865 |||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct 805 GGTTAAGGAAGCTGAGTGTTGAAGGAAACCCGCTTGTGTCGCCACCCATAGAGGTGATGG 746 Query 866 AGCAGAATCTGCAGGTGGTGAGAGAGTATCTGACACAAAAGATGAATGGAGGCTCACCAA 925 |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 745 AGCAGAATTTGCAGGTGGTGAGAGAGTATCTGACACAGAAGATGAATGGTGGCTCACCAA 686 Query 926 GGAGTCCAAGCAAAAAGAAGTCTTGGGGATTCGGTAAATTGGTGAAGTATGGGACGTTCA 985 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 685 GGAGTCCCAGCAAAAAGAAGTCATGGGGATTCGGTAAATTGGTGAAGTATGGGACGTTCA 626 Query 986 ATGGCGGATCAAGAAGCTGGAATAGAGAGGAGAGGGAAGGGTTTATCATGCCTGAGTACC 1045 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 625 ATGGCGGATCAAGAAGCTGGAATAGAGAGGAGAGAGAAGGGTTCATCATGCCTGAGTACC 566 Query 1046 GCGCCATCGACAGTCTTGCTTCGCCTAGGTATTCTGGAATGTTCTCTCCACGCCGTCTCT 1105 || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 565 GCTCCATCGACAGTCTTGCTTCGCCTAGGTATTCTGGAATGTTCTCTCCACGTCGTCTCT 506 Query 1106 TTTCTCCAAGAAC 1118 ||||||||||||| Sbjct 505 TTTCTCCAAGAAC 493 > AT4G29880.1 | Symbols: PIRL7 | plant intracellular ras group-related LRR 7 | chr4:14607078-14608379 REVERSE LENGTH=1122 Length=1122 Score = 848 bits (459), Expect = 0.0 Identities = 933/1156 (81%), Gaps = 56/1156 (5%) Strand=Plus/Plus Query 1 ATGATATGCGAAGAGGCATATC---ATCAGCAACCGCAAATACAAAAGGAACAAATGATG 57 |||||||||||||| ||||||| |||||||| || ||||||||| || |||||| Sbjct 1 ATGATATGCGAAGATGCATATCAGTATCAGCAATTACATGGACAAAAGGATCACATGATG 60 Query 58 ACTATGATGATGATGGATCAACGTAGTAATCATCAACGGA-AAAAATCACCATTATCGTC 116 || |||||||||||||| | | ||| | |||| || | | ||||||| | | || Sbjct 61 ACAATGATGATGATGGA-C-TTG-AGT-A-CATC-AC-CACCATCATCACCACT-T--TC 110 Query 117 GCCATCATCTCCATCATCACCAAAATCACCATCATTCAATAATAATGAGGAAGAGAGGCT 176 ||||| || | ||| ||||| |||||||||| |||||| || ||||||||||| || Sbjct 111 ACCATC--CT---T-ATCGCCAAAGTCACCATCATACAATAACAACGAGGAAGAGAGACT 164 Query 177 AGAGGTTGTGAATTTGAGTGGGATGGCATTGGAGTCTCTCCCTAATCCTTCACTCAATTT 236 ||||||||||||||||||||| |||||||| | |||||||| |||||||| |||||||| Sbjct 165 AGAGGTTGTGAATTTGAGTGGCATGGCATTACAATCTCTCCCAAATCCTTCCCTCAATTT 224 Query 237 AGCTCAGATTTGCAAGCTTGATCTCTCCAACAATCATCTCCAGACTATACCAGAATCAT- 295 || | |||||||||||||||||||||||||||||| || ||| ||||||||||| | Sbjct 225 GGCAAATATTTGCAAGCTTGATCTCTCCAACAATCATATCAAGAAAATACCAGAATC-TC 283 Query 296 TAACAGCGAGACTACTCAACTTGATAGCATTAGATGTTCACTCAAATCAGATCAAAGCTC 355 ||||||| ||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct 284 TAACAGCAAGATTACTCAACTTGATAGCATTGGATATTCACTCAAACCAGATCAAAGCTC 343 Query 356 TTCCAAACTCCATTGGTTGTCTCTCTAAGCTCAAGACTC-TCAATGTCTCCGGCAACTTT 414 |||||||||||||||||||||| ||||||||||||| || | |||||||||||||||||| Sbjct 344 TTCCAAACTCCATTGGTTGTCTTTCTAAGCTCAAGA-TCCTTAATGTCTCCGGCAACTTT 402 Query 415 CTTGTATCCTTCCCC-AAATCTATCCAACATTGCAGGTCTCTGGAAGAACTAAATGCAAA 473 || || ||| ||||| ||| |||| ||| |||||||||| || ||||||||||| || || Sbjct 403 CTCGTTTCCCTCCCCCAAA-CTATTCAAAATTGCAGGTCACTCGAAGAACTAAACGCCAA 461 Query 474 CTTCAACAAACTCATCAGATTACCAGACTCCATTGGATTTGAACTCACCAATCT-AAGGA 532 ||||||| | || || |||||||||||| ||| || || ||||| |||||||| || | Sbjct 462 CTTCAACGAGCTGATTAGATTACCAGACAACATAGGCTTAGAACTAACCAATCTGAAA-A 520 Query 533 AGCTCTCTATCAACTCCAACAAGCTAATTAGTCTTCCA-CTCTCCATTAC-TCACCTCAC 590 |||||| | ||||||| |||||||| ||||| || ||| | | |||| || | |||||| Sbjct 521 AGCTCTGTGTCAACTCAAACAAGCTCATTAGCCTACCAGC-CACCATCACCTG-CCTCAC 578 Query 591 ATCTCTCCGTGTCCTCGACGCTCGTCTCAACTGCCTCATGATTCTCCCAGATGATCTCGA 650 || || ||||||||||| ||||||||||| ||||| ||||| ||||| || || ||||| Sbjct 579 TTCCCTGCGTGTCCTCGATGCTCGTCTCAATTGCCTTATGATCCTCCCTGAGGACCTCGA 638 Query 651 GAATCTCATCAACCTCGAGATTCTCAATGTCAGCCAGAATTTCCAGTATCTTTCCGCTCT 710 ||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 639 GAACCTCATCAACCTCGAAATCCTCAATGTCAGTCAGAACTTCCAGTATCTTTCTGCTCT 698 Query 711 TCCATCTTCCATTGGCCTTTTAATGAACCTCATTGAGCTCGATGTTAGCTACAACAAGAT 770 ||||||||| || || ||| | |||||||| | || || ||| |||||||||||||||| Sbjct 699 TCCATCTTCTATCGGTCTTCTCCTGAACCTCCTCGAACTGGATATTAGCTACAACAAGAT 758 Query 771 CACTGTATTACCTGAGTCCATTGGCTGCATGAGAAGGTTAAGGAAGCTGAGTGTTGAAGG 830 || || || |||||||| ||||| |||||||| | || | || ||||| | ||||| Sbjct 759 AACAGTGTTGCCTGAGTCTATTGGATGCATGAGGCGCCTACGAAAACTGAGCGCGGAAGG 818 Query 831 AAACCCGCTCGTGTCCCCGCCCATCGAGGT-GATGGAGCAGAATCT-GCAGGTGGTGAGA 888 |||||| ||||| ||||| ||||| ||||| | |||| |||| || ||| | |||| || Sbjct 819 AAACCCACTCGTCTCCCCACCCATTGAGGTTG-TGGAACAGAG-CTTGCATGCGGTGCGA 876 Query 889 GAGTATCTGA-CACAAAAGATGAATGG-AGGCTCACCAAGGAGTC-CAAGCAAA-AAGAA 944 |||||||||| | |||||||||||||| | || || | | || ||||| ||||| Sbjct 877 GAGTATCTGAGC-CAAAAGATGAATGGTAAACTGGTGAAC-AC-CGCA-GCAAAGAAGAA 932 Query 945 GTCTTGGGGATTCGGTAAATTGGTGAAGTATGGGACGTTCAATGGCGGATCAAGAAGCT- 1003 | | ||||| ||| ||||| | || ||||| ||||| ||||||||| ||||||| | | Sbjct 933 GACATGGGGTTTCCGTAAACTAGTCAAGTACGGGACATTCAATGGCAGATCAAGG-GTTT 991 Query 1004 GGAATAGAGAGGAGAGGGAAGGGTTTATCATGCCTGAGTACCG-CGCCATCGACAGTCTT 1062 ||| || || ||| | |||||| | ||||||||||||||||| | |||| || | || | Sbjct 992 GGACCAGGGAAGAGCGAGAAGGGCTCATCATGCCTGAGTACCGTC-CCATTGATA-TCCT 1049 Query 1063 G-CTTCG-CCTAGGTATTC-TG-GAATGTTCTCTCCACGCCGTCTCTTTTCTCCAAGAAC 1118 |||| || || | ||| || || || ||| || || |||||||| || |||||||| Sbjct 1050 AACTTCCACCAAG-T-TTCCTGTGAC-GTGCTCACCTCGACGTCTCTTCTCCCCAAGAAC 1106 Query 1119 CTATTTCAGCAGATAA 1134 |||||||||||||||| Sbjct 1107 CTATTTCAGCAGATAA 1122 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55622203860 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5