BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343373
Length=3171
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 2756 0.0
AT2G17530.1 | Symbols: | Protein kinase superfamily protein | ... 2265 0.0
AT4G35500.2 | Symbols: | Protein kinase superfamily protein | ... 1245 0.0
> AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr2:7623826-7626186 FORWARD LENGTH=2290
Length=2290
Score = 2756 bits (1492), Expect = 0.0
Identities = 1682/1776 (95%), Gaps = 4/1776 (0%)
Strand=Plus/Plus
Query 67 TCTTCTTTGCTTTCTGTACCCAGCGATGATCATATCGTCCGTCTCATTCTAGACCAGAAA 126
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TCTTCTTTGCTTTCTGTGCCCAGCGATGATCATATCGTCCGTCTCATTCTAGACCAGAAA 443
Query 127 TCAGCTTCTGGAGCTTTGGAAACTTTTCGATGGGCTTCAACTTTTCCTGGGTTTATCCAT 186
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 444 TCAGCTTCTGGAGCTTTGGAAACTTTTCGATGGGCTTCGACTTTTCCTGGGTTTATCCAT 503
Query 187 TCTCGTTCCACTTACCGTGCTCTGTTTTATAAACTTTGTGTTTTCCGTCGTTTTGATACT 246
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 504 TCTCGTTCCACTTACCGTGCTCTGTTTCATAAACTTTGTGTTTTCCGACGTTTTGATACT 563
Query 247 GTCTACCAACTGCTCGACGAAATGCCTGAGTCAACCGGTTTGCCTCCGGATGATGCTATC 306
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 564 GTCTACCAACTGCTCGACGAAATGCCTGACTCAATTGGTTTGCCTCCGGATGATGCTATT 623
Query 307 TTTGTAACTATCATTAGAGGGTTTGGGCGTGCTCGATTGACCAAACGTGTGATTAGTGTT 366
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 624 TTTGTAACTATCATTAGAGGGTTTGGGCGTGCTCGGTTGATCAAACGTGTGATTAGTGTT 683
Query 367 GTTGATCTGGTTTCGAAATTTGGGATCAAACCATCTTTGAAAGTTTTCAATTCGAT-CTT 425
|||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 684 GTTGATCTAGTTTCGAAATTTGGGATCAAACCATCTCTGAAAGTTTTCAATTCGATTCT- 742
Query 426 GGATGTTTTGGTTAAGGAAGACATTGACATAGCTAGAGAGTTTTTCAGAAGGAAGATGAT 485
||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 743 GGATGTTTTGGTTAAAGAAGACATTGACATAGCTAGAGAGTTTTTTACAAGGAAGATGAT 802
Query 486 GGCTAGTGGGATTCATGGTGATGAGTACACATATGGGATTTTGATGAAAGGGCTTTGTTT 545
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||
Sbjct 803 GGCTAGTGGGATTCATGGTGATGTGTATACATATGGGATTTTGATGAAAGGGCTTTCTTT 862
Query 546 AACGAATAGGATTGGTGATGGTTTTAAGCTCCTTCAGATCATGAAGACAAGCGGTGTGGC 605
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 863 AACGAATAGGATTGGTGATGGTTTTAAGCTTCTTCAGATCATGAAGACAAGTGGTGTGGC 922
Query 606 TCCAAACACTGTGGTTTATAACACCTTGCTTCATGCTCTTTGTAAGAATGGGAAAGTTGG 665
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 923 TCCAAACGCTGTGGTTTATAACACTTTGCTTCATGCTCTTTGTAAGAATGGGAAAGTCGG 982
Query 666 GAGAGCTAGGAGTTTAATGAGTGAAATGAAGGAACCAAATGATGTAACTTTCAACATCTT 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 983 GAGAGCTAGGAGTTTAATGAGTGAAATGAAGGAACCAAATGATGTAACTTTCAACATTTT 1042
Query 726 GATATCTGCTTACTGCAACGAGCAGAAGTTGATTCAGTCGATGGTGTTGCTGGAGAAATG 785
||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1043 GATTTCTGCGTACTGCAATGAGCAGAAGTTGATTCAGTCAATGGTGTTGTTGGAGAAATG 1102
Query 786 TTTTAGTTTGGGTCTTGTTCCGGATGTTGTGACGGTAACTAAGGTGATGGAAGTGCTCTG 845
||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1103 TTTTAGTTTGGGTTTTGTTCCGGATGTTGTGACGGTAACTAAGGTGATGGAGGTTCTCTG 1162
Query 846 CAATGAAGGCCGTGTGTCTGAGGCACTCGAGGTTTTAGAGAGAGTGGAAAGCAAAGGAGG 905
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1163 CAATGAAGGCCGTGTGTCTGAGGCACTCGAGGTTTTGGAGAGAGTGGAAAGCAAAGGAGG 1222
Query 906 TAAAGTCGATGTTGTAGCTTGTAACACCTTGGTTAAAGGGTATTGTGCGGTAGGGAAAAT 965
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1223 TAAAGTCGATGTTGTAGCTTGTAACACTTTGGTTAAAGGGTATTGTGCGCTAGGGAAAAT 1282
Query 966 GAGAGTTGCTCAACGGTTCTTCAAAGAGATGGAGAGAAAAGGTTACTTGCCGAATGTGGA 1025
||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct 1283 GAGAGTTGCTCAACGGTTCTTTATAGAGATGGAGAGAAAAGGTTACTTGCCTAATGTGGA 1342
Query 1026 AACATATAGTTTGTTGATTGCTGGATTTTGCGATGTTGGAATGTTGGATTCAGCTCTGGA 1085
|||||| | |||||||| ||||| | ||| |||||||||||||||||||||||||| ||
Sbjct 1343 AACATACAACTTGTTGATAGCTGGGTATTGTGATGTTGGAATGTTGGATTCAGCTCTTGA 1402
Query 1086 CACTTTCAATGATATGAAAACAGATGCGATTAGATGGAACTTTGCTACATTTAACACGTT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 CACTTTCAATGATATGAAAACAGATGCGATTAGATGGAACTTTGCTACATTTAACACGTT 1462
Query 1146 GATCAGAGGGCTTTCAGTAAGAGGGAGGACAGACGATGGTATAAAGATATTAGAACTGAT 1205
|||||||||||||||| || | |||||||||||||||||| |||||||||||||| ||||
Sbjct 1463 GATCAGAGGGCTTTCAATAGGGGGGAGGACAGACGATGGTTTAAAGATATTAGAAATGAT 1522
Query 1206 GCAGGACAGCGAAACCGTTCATGGGGCCAGAATCGATCCGTACAACAGTGTTATTTATGG 1265
|||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 1523 GCAGGACAGCGATACCGTTCATGGGGCCAGAATCGACCCTTACAATTGTGTTATTTATGG 1582
Query 1266 CTTTTACAAGGAAAACCGGTGGGAGGACGCTCTCGAATTCCTGTTAAAGATGGAGAAACT 1325
|||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct 1583 CTTTTACAAGGAAAACCGTTGGGAGGACGCCCTGGAATTCCTCTTAAAGATGGAGAAACT 1642
Query 1326 TTTTCCAAGGGCAGTTGACAGGAGCTTCAAGTTGATTAGTTTATGCGAGAAAGGCGGTAT 1385
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1643 TTTTCCGAGGGCAGTTGACAGGAGCTTCAAGTTGATAAGTTTATGCGAGAAAGGCGGTAT 1702
Query 1386 GGATGATGTAAAGACGGCCTATGATCAGATGACTGGAGAAGGAGGAGTTCCTAGTGTTAT 1445
||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1703 GGATGATTTAAAGACGGCCTATGATCAGATGATTGGAGAAGGAGGAGTTCCTAGCATTAT 1762
Query 1446 AGTTTCCCATTGCTTGATTCATAGATACAGCCAAGAAGG-ATACATGGAAGAAACACTTG 1504
||| |||||||||||||||||||||||||||||| | || | | || |||||| ||||||
Sbjct 1763 AGTATCCCATTGCTTGATTCATAGATACAGCCAACATGGCAAA-ATAGAAGAATCACTTG 1821
Query 1505 AGCTTATTAACGACATGGTCACCAGAGGCTATTTGCCTCGATCATCAACATTCAATGCTG 1564
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1822 AGCTTATTAACGACATGGTGACCAGAGGCTATTTGCCTCGATCATCAACATTCAATGCTG 1881
Query 1565 TGATTATCGGGTTCTGTAAGGAAGATAAAGTCATGAATGGTATCAAGTTTGTGGAAGACA 1624
|||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||
Sbjct 1882 TGATTATCGGGTTCTGTAAGCAAGACAAAGTCATGAATGGTATTAAGTTCGTGGAAGACA 1941
Query 1625 TGGCTGAGAGAGGTTGCGTTCCTGATAGAGAGAGCTACAATCCGTTGCTCGAAGAATTGT 1684
||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||
Sbjct 1942 TGGCTGAAAGAGGTTGCGTTCCTGATACAGAGAGCTACAATCCATTGCTCGAAGAGTTGT 2001
Query 1685 GCGTGAAGGGTGATTTTCAGAAGGCTTGGTTGCTTTTGTCACTAATGGTGGAGAAGAGTA 1744
|||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 2002 GCGTGAAGGGTGATATTCAGAAGGCTTGGTTGCTTTTCTCACGAATGGTGGAGAAGAGTA 2061
Query 1745 TTGTACCTGATTCTTCTATGTGGAGTTCACTGATGTTTTGTCTCAGCCAGAAAACCGCAA 1804
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2062 TTGTCCCTGATCCTTCTATGTGGAGTTCACTGATGTTTTGTCTCAGCCAGAAAACCGCAA 2121
Query 1805 TCCACTTGAACACCTCATTGCAGGACATAATCGAAA 1840
||||| | ||| |||||||||||||||||||| |||
Sbjct 2122 TCCACGTAAACTCCTCATTGCAGGACATAATCCAAA 2157
> AT2G17530.1 | Symbols: | Protein kinase superfamily protein
| chr2:7626359-7629149 FORWARD LENGTH=2007
Length=2007
Score = 2265 bits (1226), Expect = 0.0
Identities = 1296/1331 (97%), Gaps = 0/1331 (0%)
Strand=Plus/Plus
Query 1841 ACAGAGATATGTCGTGTTCATCCTCATCTGGATCAGATGAAGACGATGAGGGTTTCGATG 1900
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 152 ACAGAGATATGTCGTGTTCATCCTCATCTGGATCAGAGGAAGACGATGAGGGTTTCGATG 211
Query 1901 CTTACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGACCAGTTTGCCGGTGGCCGTT 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 CTTACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGACCAGTTTGCCGGTGGCCGTT 271
Query 1961 ACATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATGATA 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 272 ACATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATGATA 331
Query 2021 CTCGCACCTCTAATTATGTTGCTTTGAAGATTCAGAAGAGCGCTTTACAATTTGCTCAAG 2080
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 332 CTCGCACTTCTAATTATGTTGCTTTGAAGATTCAGAAGAGCGCCTTACAATTTGCTCAAG 391
Query 2081 CTGCACTTCACGAAATCGAACTTCTTCAAGCTGCTGCTGATGGGGATCCTGGAAATACCA 2140
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 392 CTGCACTTCATGAAATCGAACTTCTTCAAGCTGCTGCTGATGGGGATCCTGAAAATACCA 451
Query 2141 AATGTGTTGTTCGTCTTATTGATGACTTCAAGCACGCAGGTCCCAATGGGCAGCATTTAT 2200
| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 452 AGTGTGTTATTCGTCTTATTGATGACTTCAAGCACGCAGGTCCCAACGGGCAGCATTTAT 511
Query 2201 GCATGGTGCTTGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATCAAATACAACCGTTATA 2260
|||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 512 GCATGGTGCTCGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATTAAATATAACCGTTATA 571
Query 2261 AAGGGATGGAGTTGAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTGGTCTAGATT 2320
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 AAGGGATGGAGTTAAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTGGTCTAGATT 631
Query 2321 ATTTGCACCGTGAACTTGGTATGATTCACTCCGACTTAAAACCCGAAAACATTCTTCTTT 2380
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 ATTTGCACCGTGAACTCGGTATGATTCACTCCGACTTAAAACCCGAAAACATTCTTCTTT 691
Query 2381 GTTCCACCATTGACCCTGCCAAGGATCCCATCAGATCCGGACTAACACCAATACTAGAAA 2440
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 692 GTTCCACCATTGACCCTGCCAAGGATCCTATCAGATCCGGACTAACACCGATACTAGAAA 751
Query 2441 AGCCTGAGGGTAACCAAAACGGTACATCAACAATGAATCTGATTGAGAAGAAGTTGAAGA 2500
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 AGCCCGAGGGGAACCAAAACGGTACATCAACAATGAATCTGATTGAGAAGAAGTTGAAGA 811
Query 2501 GGAGAGCGAAAAAGGCGGCTGCTAAAATATCAGGAAGAAGAGTTTCGATAGTAGGTTTAA 2560
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GGAGAGCAAAAAAAGCGGCTGCTAAAATATCAGGAAGAAGAGTTTCGATAGTAGGTTTAA 871
Query 2561 GTGAAACACCGACAAAGAACAAGAGAAATTTGGATGGGATTGATATGAGATGCAAAGTTG 2620
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 872 GTGAAACACCGAAAAAGAACAAGAGAAACTTGGATGGGATTGATATGAGATGCAAAGTTG 931
Query 2621 TCGACTTTGGGAACGGGTGTTGGGCTGATAAGAAATTTGCAGAAGAAATACAAACAAGAC 2680
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 932 TCGACTTCGGGAACGGGTGTTGGGCTGATAACAAATTTGCAGAAGAAATACAAACAAGAC 991
Query 2681 AGTACAGAGCTCCTGAAGTAATACTTCAGTCAGGTTACTCTTACTCTGTTGATATGTGGT 2740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 AGTACAGAGCTCCTGAAGTAATACTTCAGTCAGGTTACTCTTACTCTGTTGATATGTGGT 1051
Query 2741 CTTTCGCGTGTACTGCTTTCGAGCTTGCTACAGGTGATATGCTTTTCGCTCCAAAAGAGG 2800
||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1052 CTTTCGCTTGTACTGCTTTTGAGCTTGCTACAGGCGATATGCTTTTCGCTCCAAAAGAGG 1111
Query 2801 GTAATGGTTACGGAGAAGACGAGGACCACCTTGCTCTTATGATGGAACTCTTAGGAAAAA 2860
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 GAAATGGTTACGGAGAAGACGAGGACCACCTTGCTCTTATGATGGAACTCTTAGGAAAAA 1171
Query 2861 TGCCTCGAAAGATTGCCATTGGAGGTGCGAGATCAAAGGATTACTTTGACAGACACGGCG 2920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 TGCCTCGAAAGATTGCCATTGGAGGTGCGAGATCAAAGGATTACTTTGACAGACACGGCG 1231
Query 2921 ACTTGAAGAGGATCCGGAGATTAAAATACTGGCCACTCGACCGTTTACTGATTGATAAAT 2980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 ACTTGAAGAGGATCCGGAGATTAAAATACTGGCCACTCGACCGTTTACTGATTGATAAAT 1291
Query 2981 ACAAGCTTCCAGAAGCAGAATCACGGGAATTTGCGGAATTTCTCTGCCCGATTATGGATT 3040
|||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||||||
Sbjct 1292 ACAAGCTTCCAGAAGCAGAAGCACGAGAATTTGCGGATTTTCTCTGCCCGATAATGGATT 1351
Query 3041 TTGCACCTGAGAAACGACCAACTGCTCAACAATGTCTGCAACATCCATGGTTGAATCTCA 3100
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1352 TTGCACCTGAGAAACGACCAACTGCACAACAATGTCTGCAACATCCATGGTTGAATCTAA 1411
Query 3101 GGACACAGAACAATGAAGATCAAATAGAAGGTCAGATGAGTAACATGCAGATCAAAGGTT 3160
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1412 GGACACAGAACAATGAAGATGATATAGAAGGTCAGATGAGTAACATGCAGATCAAAGGTT 1471
Query 3161 CATGTTCTTGA 3171
|||||||||||
Sbjct 1472 CATGTTCTTGA 1482
> AT4G35500.2 | Symbols: | Protein kinase superfamily protein
| chr4:16857353-16859603 FORWARD LENGTH=1638
Length=1638
Score = 1245 bits (674), Expect = 0.0
Identities = 1134/1349 (84%), Gaps = 60/1349 (4%)
Strand=Plus/Plus
Query 1843 AGAGATATGTCGTGTTCATCCTCATCTGGATCAGATGAAGACGATGAGGGTTTCGATGCT 1902
||||||||||| |||||||| || || |||||||| | ||| || |||||||||||||||
Sbjct 117 AGAGATATGTCTTGTTCATCTTCTTCCGGATCAGAAGGAGAAGAAGAGGGTTTCGATGCT 176
Query 1903 TACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGA-CCAGTTTGCCGGTGGCCGTTA 1961
|||||||||||||| ||||||||||| || ||||| || || ||| ||||||| |||||
Sbjct 177 TACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGCGATCC-TTTTTCCGGTGGTCGTTA 235
Query 1962 CATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATGATAC 2021
||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 236 CATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCCTACGATAC 295
Query 2022 TCGCACCTCTAATTATGTTGCTTTG-AAGATTCAGAAGAGCGCTTT-----ACAATTTGC 2075
| ||||||||| | | |||||||| | | || | | | |||| |||||||||
Sbjct 296 GCTCACCTCTAA-TGTTTTGCTTTGTATG-TTTTTATG-TCTCTTTGCACAACAATTTGC 352
Query 2076 TCAAGCTGCACTTCACGAAATCGAACTTC-TTCAAGCTGCTGCTGATGGGGATCCTGGA- 2133
||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| || ||
Sbjct 353 TCAAGCTGCACTTCACGAAATCGAATTTCTTTC-AGCTGCTGCTGATGGGGAT-CTCGAC 410
Query 2134 AATACCAAATGTGTTGTTCGTCTTATTGATGACTTCAAGCA-CGCAGGTCCCAATGGGCA 2192
|| || ||||||||||||||||||||||| | |||||||| | ||||| ||||||||
Sbjct 411 AAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCAAGCATAG-TGGTCCAAATGGGCA 469
Query 2193 GCATTTATGCATGGTGCTTGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATCAAATACAA 2252
||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||
Sbjct 470 GCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCTTGCTCCGTTTAATCAGATACAA 529
Query 2253 CC-GTTATAAAGGGATGGAGTTGAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTG 2311
|| | || ||||| || | ||| |||||| |||||||| |||| ||||||||||||||
Sbjct 530 CCAG-TACAAAGGTCTGAAACTGAATAAAGTCCGGGAGATTTGCAGATGTATACTGACTG 588
Query 2312 GTCTAGATTATTTGCACCGTGAACTTGGTATGATTCACTCCGACTTAAAACCCGAAAACA 2371
|| ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||
Sbjct 589 GTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTCCGACTTAAAACCTGAAAACA 648
Query 2372 TTCTTCTTTGTTCCACCATTGACCCTGCCAAGGATCCCATCAGATCCGGACTAACACCAA 2431
||||||||||||||||||||||||||||||| |||||| | ||||| ||||| || |||
Sbjct 649 TTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGTTAGATCTGGACTCACCCCAC 708
Query 2432 TACTAGAAAAGCCTGAGGGTAAC-CAAAACGGTA-C--ATCAACAATGAATCTGATTGAG 2487
|| ||||||| || ||||| ||| |||| |||| | ||||||||||||||||||||||
Sbjct 709 TATTAGAAAAACCAGAGGGAAACGCAAA-CGGTGGCGCATCAACAATGAATCTGATTGAG 767
Query 2488 AAGAAGTTGAAGAGGAGAGCGAAAA-AGGCGGCTGCTAAAATATCAGGAAGAAGAGTTTC 2546
||||| | ||||| |||||||||| || ||| |||||||||||||| ||||||||| ||
Sbjct 768 AAGAAACTAAAGAGAAGAGCGAAAAGAG-CGGTTGCTAAAATATCAGAAAGAAGAGTCTC 826
Query 2547 GATAGT-A--GGTTTAAGT-GAAACACCGACAAA-GAACAAGAGAAATTTGGATGGGATT 2601
|| || | ||| ||| | | || ||| ||| | | || | || | | |||||||||
Sbjct 827 AATGGTTACAGGTG-AAGAAGCATCATCGA-AAACGGA-AA-A-AAGTCTAGATGGGATT 881
Query 2602 GATATGAGATGCAAAGTTGTCGACTTTGGGAACGGGTGTTGGGCTGATAAGAAA-TTTGC 2660
||||||||||||||||| || |||||||| |||| |||||||||||||| | | |||||
Sbjct 882 GATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTGGGCTGATAA-ACAGTTTGC 940
Query 2661 AGAAGAAATACAAACAAGACAGTA-CAGAGCTCCTGAAGTAATACTTCAGTCAGGTTACT 2719
||||| ||||||||||||||||| | ||||||||||||||||||| ||||||| ||||
Sbjct 941 TGAAGAGATACAAACAAGACAGTATC-GAGCTCCTGAAGTAATACTAAAGTCAGGATACT 999
Query 2720 CTTACTCTGTTGATATGTGGTCTTTCGCGT-GTACTGCTTTCGAGCTTG-CTACAGGTGA 2777
||| ||||||||||||||||||||| | || |||| ||||||||||||| | ||||| ||
Sbjct 1000 CTTTCTCTGTTGATATGTGGTCTTTTG-GTTGTACGGCTTTCGAGCTTGTC-ACAGGAGA 1057
Query 2778 TATGCT-TTTCGCTCCAAAAGAGGGTAATGGTTACGGAGAAGACGAGGACCACCTTGCTC 2836
|||||| ||| || || ||||| || |||||||| || ||||||||||| ||||||||||
Sbjct 1058 TATGCTATTT-GCACCTAAAGATGGAAATGGTTATGGGGAAGACGAGGATCACCTTGCTC 1116
Query 2837 TTATGATGGAACTCTTAGGAAAAATGCCTCGAAAGATTGCCATTGGAGGTGCGAGATC-A 2895
|||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||| |
Sbjct 1117 TTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTGGAGGGGCGAAATCGA 1176
Query 2896 AAGGATTACTTTGACAGACACGGCGACTTGAAGAGGATCCGGA-GATTAAAATACTGGCC 2954
||| | ||||||||||||||||| ||||| ||||| ||||| | | || ||||| |||||
Sbjct 1177 AAG-ACTACTTTGACAGACACGGGGACTTAAAGAGAATCCG-ACGGTTGAAATATTGGCC 1234
Query 2955 ACTCGACCGTTTACTGATTGATAAATACAAGCTTCCAGAAGCAGAATCACGGGAATTTGC 3014
||| || || || |||||||||||||| |||||||| ||||||||| || ||| |||||
Sbjct 1235 ACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGCAAAGGAGTTTGC 1294
Query 3015 GGAATTTCT--CTGCCCGATTATGGATTTTGCACCTGAGAAACGACCAACTGCTCAACAA 3072
|| ||||| || || |||| | || ||||| || |||||||||||||||||||||||
Sbjct 1295 TGAGTTTCTGACT-CC-GATTCTTGAGTTTGCGCCGGAGAAACGACCAACTGCTCAACAG 1352
Query 3073 TGTCT-GCAACATCCATGGTTGAATCTCAGGACACAGAACAATGAAGATCAAAT--AGAA 3129
|| || | | ||||||||| ||||| | | ||||||||| ||| ||| |||| |||
Sbjct 1353 TG-CTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGA--AAATGTAGAT 1409
Query 3130 GGTCAGATGAGTAACATGCAGATCAAAGG 3158
| || |||| ||| |||| ||||||||
Sbjct 1410 GACCAAATGAACAACTTGCATATCAAAGG 1438
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157724868792
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5