BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg343491 Length=558 Score E Sequences producing significant alignments: (Bits) Value AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family p... 876 0.0 > AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family protein | chr2:8073200-8074982 REVERSE LENGTH=846 Length=846 Score = 876 bits (474), Expect = 0.0 Identities = 532/560 (95%), Gaps = 4/560 (1%) Strand=Plus/Plus Query 1 ATGATTGGGTTATTCAAAGTGAAAGAGAAGCAAAGAGAAGAGTCTCAAAAT-ACTAACAG 59 ||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| | Sbjct 152 ATGATTGGGTTATTCAAAGTGAAAGAGAAGCAAAGAGAAGAGTCTCAAAGTAAC-AACGG 210 Query 60 AAGAGGAGCTTCTACTGTCAAGAAGCAATCTGCTGGTGAACTTCGTCTTCACAAAGATAT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211 AAGAGGAGCTTCTACTGTCAAGAAGCAATCTGCTGGTGAACTTCGTCTTCACAAAGATAT 270 Query 120 ATCGGAGCTGAACCTGCCAAAGTCTTGTAAGATATCCTTTCCGAACGGAAAGAATGACTT 179 ||||||||||||| | |||||||||||||||||||| |||||||| || ||||||||||| Sbjct 271 ATCGGAGCTGAACTTACCAAAGTCTTGTAAGATATCTTTTCCGAATGGGAAGAATGACTT 330 Query 180 GATGAACTTTGAAGTAACCATTAAACCTGATGAAGGATATTACATGAATGGTAAATTTGT 239 |||||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct 331 GATGAATTTTGAAGTAACCATTAAACCTGATGAAGGATATTACTTGAGTGGTAACTTTGT 390 Query 240 GTTCACATTCCAAGTCTCTAATGTGTATCCCCACGAAGCTCCCAAAGTGAAATGCAAGAC 299 |||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| Sbjct 391 GTTCTCATTCCAAGTCTCTAATATGTACCCCCACGAAGCTCCTAAAGTGAAATGCAAGAC 450 Query 300 CAAGGTGTATCATCCGAATATCGATCTAGAAGGAAACGTCTGTCTGAACATCTTGCGTGA 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 451 CAAGGTGTATCATCCGAATATCGATCTAGAAGGAAACGTCTGTCTGAACATCTTGCGTGA 510 Query 360 AGACTGGAAACCGGTTCTCAACATAAACACAGTTATCTACGGTCTTTTCCATCTCTTCAC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 511 AGACTGGAAACCGGTTCTCAACATAAACACAGTTATCTACGGTCTTTTCCATCTCTTCAC 570 Query 420 GGAACCCAATTACGAGGATCCTCTGAACCATGACGCAGCAGCGGTGTTAAGGGATAACCC 479 ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| Sbjct 571 GGAACCCAATTACGAGGATCCTCTGAACCATGAAGCAGCTGCAGTGTTGAGGGATAACCC 630 Query 480 AAAG-CTGTTCGAGAATAATGTCAAAAGGGCAATGATGGGTGGCCATGTTGGCGAAACCT 538 ||| | ||||||| ||||||||| ||||||||||||||||||||| |||||| |||||| Sbjct 631 GAAGAC-GTTCGAGTATAATGTCAGAAGGGCAATGATGGGTGGCCAAGTTGGCCAAACCT 689 Query 539 CATTTCCTCGCTGCATGTAG 558 |||||||||||||||||||| Sbjct 690 CATTTCCTCGCTGCATGTAG 709 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26774800351 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5