BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343503
Length=1398
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18720.1 | Symbols: | Translation elongation factor EF1A/in... 2156 0.0
AT4G18330.2 | Symbols: | Translation elongation factor EF1A/in... 1406 0.0
AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation init... 1024 0.0
> AT2G18720.1 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr2:8114920-8116811
REVERSE LENGTH=1465
Length=1465
Score = 2156 bits (1167), Expect = 0.0
Identities = 1321/1398 (94%), Gaps = 0/1398 (0%)
Strand=Plus/Plus
Query 1 ATGTCGAAGAACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTA 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 ATGTCGAAGAACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTG 127
Query 61 CATCCTCTCTCTCCTGAGGTCATCTCTCGACAAGCCACAATTAATATAGGGACTATTGGC 120
||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||||||
Sbjct 128 CATCCTCTCTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCATTGGC 187
Query 121 CATGTTGCTCACGGGAAATCGACAATCGTGAAAGCTATTTCCGGTGTGCATACTGTTAAA 180
||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||
Sbjct 188 CATGTCGCTCACGGGAAATCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTGTCAAA 247
Query 181 TTTAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAACGCAAAGATT 240
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 248 TTCAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAAAGATT 307
Query 241 TACAAATGTGAAAAATGCCCTAGACCAGTAGCCTACAAGTCTTTCGGGAGTGGCAAAGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 TACAAATGTGAAAAATGCCCTAGACCAGTAGCCTACAAGTCTTTCGGGAGTGGCAAAGAA 367
Query 301 GACAATCCAACTTGTGATGTCTCTGGACATGAGATGTGCAAGATGAAACTACTGAGACAT 360
||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 368 GACAACCCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGAAACTACTAAGACAT 427
Query 361 GTCTCATTTGTCGATTGTCCGGGACACGATATTCTGATGGCGACAATGTTGAATGGAGCA 420
||||||||||| ||||| |||||||||||||| || |||||||||||| |||||||||||
Sbjct 428 GTCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAATGCTGAATGGAGCA 487
Query 421 GCGATTATGGATGGTGCTCTACTAATCATTGCTGCAAATGAGACATGTCCGCAACCACAA 480
|||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 488 GCGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGACATGTCCACAACCACAA 547
Query 481 ACTGCAGAACATCTTGCTTCTGTTGATATGATGCACCTTAAAGATATCATAATCATTCAG 540
|| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 548 ACAGCTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAGATATCATAATCATTCAG 607
Query 541 AACAAGATTGATCTCATCCAAGAAAACGAGGCTAGGAGACAGCACGAGGACATTCAGAGA 600
|||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct 608 AACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCACGAGGACATCCAGAGA 667
Query 601 TTTATAACGAACACAAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCACAACTGAAA 660
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 668 TTTATAACGAACACGAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCGCAACTGAAA 727
Query 661 TACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATTCCAATCCCTGAGAGGGAT 720
||||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||||
Sbjct 728 TACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATTCCACTCCCTGTGAGGGAT 787
Query 721 TTTGTGTCACCTCCAAGAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGGCTCT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 TTTGTGTCACCTCCAAGAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGGCTCT 847
Query 781 GACTATAATGATATGAAAGGTGGAGTCGCAGGTGGAAGTATCCTCCAGGGTGTTTTGAAA 840
|| ||| ||| ||||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct 848 GATTATGATGGTATGAAAGGTGGAGTTGCAGGTGGGAGTATCCTTCAGGGTGTTTTGAAG 907
Query 841 GTGGGGCATATAATAGAGATTCGACCTGGAATTACTGGCAAAGATGAGCATGGAGACACT 900
|||||||||||||||||||| |||||||||| ||| | ||||||||| |||||||||||
Sbjct 908 GTGGGGCATATAATAGAGATAAGACCTGGAATCACTAGAAAAGATGAGAATGGAGACACT 967
Query 901 AAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAACGAGCTTCAG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 AAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAACGAGCTTCAG 1027
Query 961 TTTGCTGTCCCGGGAGGTTTAATTGGGATTGGGACAAGCATGGATCCTACGCTTACGCGT 1020
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1028 TTTGCTGTCCCGGGAGGTTTGATTGGAATTGGGACAAGCATGGATCCTACGCTTACGCGT 1087
Query 1021 GGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTGATGTCTATGTT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 GGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTGATGTCTATGTT 1147
Query 1081 GAGCTTGAAGTAAGTTTCCAGCTTCTGACACGTCTCATTGGAGTAAAGACAAAGGAAACA 1140
|| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1148 GAACTTGAAGTGAGTTTCCAGCTTCTGACACGTCTCATTGGAGTGAAGACAAAGGAAACA 1207
Query 1141 GAGAGGCAAATGAGAGTGTCAAAGCTAATCAAGGGAGAGGTACTGATGTTGAATATCGGA 1200
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1208 GAGAGGCAAATGAGAGTGTCAAAGCTAGTCAAGGGAGAGATACTGATGTTGAATATCGGA 1267
Query 1201 TCAATGTCGACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGATGAAAGTGAAACTG 1260
|| ||||| |||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 1268 TCGATGTCTACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGGTGAAAGTTAATCTG 1327
Query 1261 ACGCTCCCTGTATGCACCAACATAGGAGAGAAAGTGGCTATAAGTCGCCGTGTTGATAGG 1320
|| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1328 ACACTCCCTGTGTGCACCAGCATTGGAGAGAAAGTGGCTATAAGTCGCCGTGTGGATAGG 1387
Query 1321 CATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCATTCCCATACCTGAT 1380
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 1388 CATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCATTTTTATCCCTTCT 1447
Query 1381 CCTCCTTCTTTGCCATGA 1398
|||||||||||| |||||
Sbjct 1448 CCTCCTTCTTTGGCATGA 1465
> AT4G18330.2 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr4:10126579-10128734
FORWARD LENGTH=1659
Length=1659
Score = 1406 bits (761), Expect = 0.0
Identities = 1181/1381 (86%), Gaps = 40/1381 (3%)
Strand=Plus/Plus
Query 10 AACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTACATCCTCTC 69
|||||||| || || || |||||||||| ||| ||||||||| | || ||||||||||
Sbjct 124 AACAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACAAAGTTACATCCTCTG 183
Query 70 TCTCCTGAGGTCATCTCTCGACAAGCCACAATTAATATAGGGACTATTGGCCATGTTGCT 129
| |||||| ||||| ||||| ||||| || || ||||| || || ||||| ||||| |||
Sbjct 184 TTTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATGTCGCT 243
Query 130 CACGGGAAATCGACAATCGTGAAAGCTATTTCCGGTGTGCATACTGTTAAATTTAAGAGT 189
||||| |||||||| || ||||||||||| || ||||| || ||||| ||||||| |
Sbjct 244 CACGGTAAATCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAAGAAT 303
Query 190 GAATTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAACGCAAAGATTTACAAATGT 249
||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct 304 GAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTACAAGTGT 363
Query 250 GA--A--A-AA-TGCCCTAGACC-A-GTAGCCTACAAGTC-TTTCGGGAGTGGCAAAGAA 300
|| | | || ||||||||||| | || | ||||||||| | | |||||||| ||||||
Sbjct 364 GAGGATGACAAGTGCCCTAGACCAATGT-G-CTACAAGTCATAT-GGGAGTGGAAAAGAA 420
Query 301 GACAATCCAACTTGTGATGTCTCTGGACATGAG-ATGTGCAAGATGAAACTACTGAGACA 359
||||| ||||||||||||||| | ||| |||| || |||||||||| ||||| ||||||
Sbjct 421 GACAACCCAACTTGTGATGTCCCCGGATTTGAGAAT-TGCAAGATGACACTACGGAGACA 479
Query 360 TGTCTCATTTGTCGATTGTCCGGGACACGATATTCTGATGGCGACAATGTTGAATGGAGC 419
|||||||| |||||||||||||||||| |||||||| |||||||||||| | ||||||||
Sbjct 480 TGTCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAGC 539
Query 420 AGCGATTATGGATGGTGCTCTACTAATCATTGCTGCAAATGAGACATGTCCGCAACCACA 479
||| || ||||||||||| |||| | |||||||| || |||| ||||| ||||||||
Sbjct 540 AGCAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGTTGTCCACAACCACA 599
Query 480 AACTGCAGAACATCTTGCTTCTGTTGATATGATGCACCTTAAAG-ATATCATAATCATTC 538
||| || |||||||||||||||||||||||||||| |||| ||| ||||||||||| |||
Sbjct 600 AACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTT-AAGCATATCATAATCCTTC 658
Query 539 AGAACAAGATTGATCTCATCCAA-GA-AAACGAGGCTA-GGAGACAGCACGAGGAC-ATT 594
||||||||||||||||||| || || ||| | || | || ||||||||||| | |||
Sbjct 659 AGAACAAGATTGATCTCAT-TAATGAGAAA-GCCGCCACTGA-ACAGCACGAGG-CTATT 714
Query 595 CAGAGATTTATAACGAACACAAATGCGGAAGG-TGCTCCTATAGTTCCTGTCTCAGCACA 653
|||| ||||||||||||||| ||||| | ||| ||| |||||||||||||||||||||||
Sbjct 715 CAGAAATTTATAACGAACACGAATGCTG-AGGATGCACCTATAGTTCCTGTCTCAGCACA 773
Query 654 ACTGAAATACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATTCCAATCCCTGA 713
||||||||||||||| ||||||||| | || ||||| ||||||||||||||||||||||
Sbjct 774 ACTGAAATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCTGT 833
Query 714 GAGGGATTTTGTGTCACCTCCAA-GAATGATTGTGATTCGTTCTTTTGATGTCAATAAAC 772
||| || ||||||||||| |||| || ||||||||||||||||||| |||||||||||||
Sbjct 834 GAGAGACTTTGTGTCACCACCAAAGA-TGATTGTGATTCGTTCTTTCGATGTCAATAAAC 892
Query 773 CTGGCTCTGACTA-TAATGATATGAAAGGTGGAGTCGCAGGTGGAAGTATCCTCCAGGGT 831
||||||| | | | |||| ||||||||||| || || |||||||||||||||||||||
Sbjct 893 CTGGCTCGG-CGGGTCATGAAATGAAAGGTGGTGTTGCTGGTGGAAGTATCCTCCAGGGT 951
Query 832 GTTTTGAAAGTGGGGCATA-TAATAGAGATTCGACCTGGAATTACTGGCAAAGATGAGCA 890
|||||||||||| || | | || || ||| ||||||| || |||||||||||||||||
Sbjct 952 GTTTTGAAAGTGAACCA-ACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAGCA 1010
Query 891 TGGAGACACTAAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAA 950
|||| || | ||||||||||| |||||| |||||||||||||| | ||||||||||||||
Sbjct 1011 TGGAAACTCAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAGAA 1070
Query 951 CGAGCTTCAGTTTGCTGTCCCGGGAGGTTTAATTGG-GATTGGGACAAGCATGGATCCTA 1009
|||||||||||||||||| ||||||||| |||| || | |||| |||| |||||| ||||
Sbjct 1071 CGAGCTTCAGTTTGCTGTACCGGGAGGTCTAATCGGAG-TTGGAACAACCATGGACCCTA 1129
Query 1010 CGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTG 1069
|||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1130 CGCTTACGCGTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCTG 1189
Query 1070 ATGTCTATGTTGAGCTTGAAGTAAGTTTCCAGCTTCTGACACGTCTCATTGGAGTAAAGA 1129
| |||| |||||||||||||||||||| |||||||||||| |||||||||||||| | ||
Sbjct 1190 ACGTCTTTGTTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGGA 1249
Query 1130 CAAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTAATCAAGGGAGAGGTACTGATGT 1189
||||||||| ||||| |||||||| |||||||||||||| ||| | |||| || |||||
Sbjct 1250 CAAAGGAAAAAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATGG 1309
Query 1190 TGAATATCGGATCAATGTCGACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGATGA 1249
|||| ||||| || ||||| |||||||||| |||||||||||| |||||||||||| |||
Sbjct 1310 TGAACATCGGGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTGA 1369
Query 1250 AAGTGAAACTGACG-CTCCCTGTATGCACCAACATAGGAGAGAAAGTGGCTATAAGTCGC 1308
|| | |||||||| |||| || || |||| |||||||||||| || ||| |||| ||
Sbjct 1370 AACTCCAACTGACGTCTCCG-GTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGA 1428
Query 1309 CGTGTTGATAGGCATTGGCGTTTGATCGGTC-GCGGTCAGATTGA-GGCTGGAACCACCA 1366
||||| ||||||||||||||| | || ||| | ||||||||| | ||||||||||||||
Sbjct 1429 CGTGTCGATAGGCATTGGCGTCTAATTGGTAAG-GGTCAGATT-ATGGCTGGAACCACCA 1486
Query 1367 T 1367
|
Sbjct 1487 T 1487
> AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation initiation
factor 2 gamma subunit | chr1:1096946-1099898 FORWARD
LENGTH=1793
Length=1793
Score = 1024 bits (554), Expect = 0.0
Identities = 1128/1400 (81%), Gaps = 60/1400 (4%)
Strand=Plus/Plus
Query 1 ATGTCGAAGAACAAGGGCTTAGCTGAACAAGATC-TAAGTAAACTT-GATGTAGCTCAGC 58
||||||| ||||||||| || ||||| ||||||| ||| ||| || |||||| || ||
Sbjct 200 ATGTCGAGGAACAAGGGTTTGGCTGAGCAAGATCTTAA--AAAATTGGATGTAACTGTGC 257
Query 59 TACATCCTCTCTCTCCTGAGGTCATCTCTCGACAAGCCACAATTAATATAGGGACTATTG 118
|||||||||| |||||||||||||| ||||| || ||||| ||||||||||| || ||||
Sbjct 258 TACATCCTCTGTCTCCTGAGGTCATTTCTCGCCAGGCCACTATTAATATAGGAACCATTG 317
Query 119 GCCATGTTGCTCACGGGAAA-TCGACAATCGTGAAAGCTATTTCCGGTGTGCATACTGTT 177
| ||||| ||||| ||||| || || | || ||||||||||| ||||| || |||||
Sbjct 318 GTCATGTCGCTCA-TGGAAAGTCCACTGTTGTTAAAGCTATTTCTGGTGTCCAGACTGTC 376
Query 178 AAATTTAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAACGCAAAG 237
||||| | ||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct 377 CGTTTTAAAAATGAATTGGAGCGTAACATTACCATTAAGCTTGGATATGCAAACGCCAAG 436
Query 238 ATTTACAAATGT---GA--A-AAATGCCCTAGACC-A-GTAGCCTACAAGTCTTTCGGGA 289
|||||||||||| || | |||||||||||||| | || | ||||||| | | ||| |
Sbjct 437 ATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATGT-G-CTACAAGGCCTACGGAA 494
Query 290 GTGGCAAA-GAAGACAAT-CCAACTTGTGATGTCTCTGGACATGAGATGTGCAAGATGAA 347
|||| ||| ||||||| | |||| |||||||||| | ||| ||| | | |||||||||
Sbjct 495 GTGG-AAAGGAAGACACTCCCAA-TTGTGATGTCCCCGGATTTGAAAACTCCAAGATGAA 552
Query 348 ACTACTGAGACATGTCTCATTTGTCGATTGTCCGGGACACGATATTCTGATGGCGACAAT 407
|||| |||| ||||||||||| || ||||| ||||| ||||||||||| ||||| |||||
Sbjct 553 ACTATTGAGGCATGTCTCATTCGTTGATTGCCCGGGTCACGATATTCTCATGGCAACAAT 612
Query 408 G-TTGAATGGAGCAGCGATTATGGATGGTGCTCTACTAATCATTGCTGCAAATGAGACAT 466
| || ||||||||||| || ||||||||||| ||||| | || ||||||||||| || |
Sbjct 613 GCTT-AATGGAGCAGCCATCATGGATGGTGCACTACTTTTAATCGCTGCAAATGAAACTT 671
Query 467 GTCCGCAACCACAAACTG-CAGAACATCTTGCTTCTGTTGATATGATGCACCTTAAAG-A 524
|||| ||||||||||| | | |||||||||||| | ||||| || ||||| ||| ||| |
Sbjct 672 GTCCACAACCACAAAC-GTCTGAACATCTTGCTGCCGTTGAGATTATGCAACTT-AAGCA 729
Query 525 TATCATAATCATTCAGAACAAGATTGATCTCATCCAAGAAAACGAGGCTAGGAGA-CAGC 583
|||||| ||| ||||||||||||||||||| || ||||| || | || | | | ||||
Sbjct 730 TATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAATGTTGCCATTA-ATCAGC 788
Query 584 ACGAGGAC-ATTCAGAGATTTATAACGAACACAAATGCGGAAGGTGCTCCTATAGTTCCT 642
|||||| | ||||||| |||||||| |||||| ||| || | |||||| || || |||
Sbjct 789 ACGAGG-CAATTCAGAAATTTATAATGAACACTGTTGCTGATGCTGCTCCGATCGTCCCT 847
Query 643 GTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATT 702
|||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct 848 GTCTCAGCACAACTGAAATACAACATTGATGTGGTGTGCGAGTACATTGTCAAGAAGATC 907
Query 703 CCAATCCCTGAGAGGGATTTTGTGTCACCTCCAAGA-ATGATTGTGATTCGTTCTTTTGA 761
||||||||||||||| ||||||||||||| |||| | ||||| |||||||| ||||||||
Sbjct 908 CCAATCCCTGAGAGGAATTTTGTGTCACCCCCAA-ATATGATAGTGATTCGGTCTTTTGA 966
Query 762 TGTCAATAAACCTGGCTCTGA-CTATAATGATATGAAAGGTGGAGTCGCAGGTGGAAGTA 820
|||||| |||||||| | ||| | | |||| || ||||||||||| |||||||||||||
Sbjct 967 TGTCAACAAACCTGGTTATGAGGT-TGATGAGATCAAAGGTGGAGTTGCAGGTGGAAGTA 1025
Query 821 TCCTCCAGGGTGTTTTGAAAGTGGGGC-ATATAATAGAGATTCGACCTGGAATTACTGGC 879
|||| | ||||||||||| ||| | || |||| || || |||||||| || | |
Sbjct 1026 TCCTACGGGGTGTTTTGAGAGTCAACCAAT-TAATCGAAATCCGACCTGGTATCGTTACC 1084
Query 880 AAAGATGAGCATGG-AGACACTAAATGCACTCCCATTTACACGCGTATAACTTCATTGTA 938
||||| |||| ||| | || | ||||||||||| |||||| | || || | |||| | ||
Sbjct 1085 AAAGACGAGCGTGGCA-ACTCAAAATGCACTCCAATTTACTCTCGCATCATTTCACTCTA 1143
Query 939 CGCGGAACAGAACGAGCTTCAGTTTGCTGTCCCGGGAGGTTTAATTGG-GATTGGGACAA 997
|||||||||||||||||||||||||||||| || |||||| |||| || | |||| ||||
Sbjct 1144 CGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGAGGTCTAATAGGAG-TTGGAACAA 1202
Query 998 GCA-TGGATCCTACGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATA 1056
|| |||| || || || || |||| ||| | ||||||||||||||||||||||||||
Sbjct 1203 -CAATGGACCCAACTCTCACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGGTGAAATC 1261
Query 1057 GGTACTCTCCCTGATGTCTATGTTGAGCTTGAAGT-AAGTTTCCAGCTTCTGAC-ACGTC 1114
||| | || |||||||| | |||||| || || || || || | ||||| || ||||
Sbjct 1262 GGTTCACTTCCTGATGTATTTGTTGAACTCGAGGTGAACTT-CTTTCTTCT-ACGACGTT 1319
Query 1115 TCATTGG-AGTAAAGA-CAAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTAATC-A 1171
| |||| ||| | || |||||| | |||||| ||| || |||||||||||||| | |
Sbjct 1320 TG-TTGGGAGTGA-GAACAAAGGGATCAGAGAAACAAGGGAAAGTGTCAAAGCTAA-CGA 1376
Query 1172 AGGGAGAGGTACTGATGTTGAATATCGGATCAATGTCGACGGGAGCTATGGTTATTGGAG 1231
| |||||| | |||||| | || || || || ||||| || ||||| | ||| | ||||
Sbjct 1377 AAGGAGAGATTCTGATGCTCAACATTGGTTCGATGTCCACTGGAGCCAAAGTTGTAGGAG 1436
Query 1232 T-AAAGAAAGATATGA-TGAAAGTGAAACTGAC-GCTCCCTGTATGCACCAACATAGGAG 1288
| |||| ||| || | ||| || ||||||| || || ||| || |||| || |||||
Sbjct 1437 TTAAAGTC-GATCTGGCT-AAACTGCAACTGACTGCGCC-TGTTTGTACCAGCAAAGGAG 1493
Query 1289 AGAAAGTGGCTATAAGTC-GCCGTGTTGATAGGCATTGGCGTTTGATCGGTCGCGGTCAG 1347
||||||||||| |||| | | ||||| || | ||||||||||||||| ||| | ||||||
Sbjct 1494 AGAAAGTGGCTCTAAG-CAGACGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGTCAG 1552
Query 1348 ATTGAGGCTGGAACCACCAT 1367
||| | ||||||||||||||
Sbjct 1553 ATTCAAGCTGGAACCACCAT 1572
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68875147740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5