BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343684
Length=1308
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 1327 0.0
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 1262 0.0
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 1003 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 568 6e-161
AT2G16220.1 | Symbols: | F-box and associated interaction doma... 348 9e-95
AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 291 2e-77
AT3G56890.1 | Symbols: | F-box associated ubiquitination effec... 135 8e-31
AT5G38810.1 | Symbols: | F-box and associated interaction doma... 73.1 6e-12
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 1327 bits (718), Expect = 0.0
Identities = 998/1128 (88%), Gaps = 40/1128 (4%)
Strand=Plus/Plus
Query 182 CTAACCCGCGCCTCTTATTCGCCACCGCAGA-AAACGGCAAGGAAA-ACGCAAA-ATCTT 238
|||| ||||||||||||||||||| |||||| ||| ||||| ||| | | ||| | |
Sbjct 155 CTAAGCCGCGCCTCTTATTCGCCATCGCAGAGAAA-GGCAA-CAAAGA-G-AAAGA-C-- 207
Query 239 GTGGTGTGTGGAGCTTCTTCTCGTCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGT 298
| |||||||||| |||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 208 -T-GTGTGTGGAGGTTCTTCTCGTCGCCACAGCTTGAGAATCCATATGAGAAATCCTCAT 265
Query 299 CGACTCTTGTAGCTGCCGCCGAATTTCATGTGAAG-TTCTCTCCAGACAATCTACGGATC 357
||||||||||||| |||| |||||||||||| || ||||||||||||||||||| ||||
Sbjct 266 CGACTCTTGTAGCAACCGCTGAATTTCATGTG-AGATTCTCTCCAGACAATCTACTGATC 324
Query 358 AATCATTATTATGACCTAAAATATTTTTCAATTGGCTATGCCTCTGGTTTGATCTATTTA 417
||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |
Sbjct 325 TGTCATTATTATGACCTAAAATATTTTTCAATTGGTTATGCCTTTGGCTTGATCTATATC 384
Query 418 TATGGTAATAGAGGCCAGGCTAGACCTGTGATATGTAACCCCATC-ACAGGACGGTATGC 476
||||||||| |||||| |||||||||| | ||||||||||||| | ||||||||||||||
Sbjct 385 TATGGTAATCGAGGCCGGGCTAGACCTCTAATATGTAACCCCA-CTACAGGACGGTATGC 443
Query 477 GATCTTACCTGATCGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCAT 536
||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| ||
Sbjct 444 CATCTTACCTAATCGGTATACTTACAGAAAGGCGTTTAGCTTTTTCGGGTTTGACCCAAT 503
Query 537 TGACAAGCAATACAAGGTATTGTCCATGGTCTATCGTCCATCTGGTCCTGGTGATAGTAA 596
||||||||||||||||| |||||||||||| | | |||||||||||||||| ||||||
Sbjct 504 TGACAAGCAATACAAGGCATTGTCCATGGT-T-T-ATCCATCTGGTCCTGGTCATAGTAG 560
Query 597 AATTCTTACATTTGGAGCTGGAGATATGATGACGTGGAGAAAGATAAATTGTCTC-TTAC 655
| || |||||||||||||||||||| ||| | |||||||| |||||| ||| || || |
Sbjct 561 AGTTATTACATTTGGAGCTGGAGATCTGA--A-GTGGAGAAGGATAAAATGT-TCATTGC 616
Query 656 GACATGATGTTAAGAGTGAAGGGGTATGCATCAATGGGGTTTTGTATTACTTAGGTGACA 715
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 617 GACATGATATTAAGAGTGAAGGGGTATGTATCAATGGGGTTTTGTATTACTTAGGTGACA 676
Query 716 CGTCGGATTGGGGTCACGTTAATGATGGTCATGATGTAACGTCTGATTATGTGATAGTTT 775
||||||||||| ||| |||||||| | | || | |||||||||| |||| |||||||||
Sbjct 677 CGTCGGATTGGAGTCGCGTTAATG--G-TAATCACGTAACGTCTGGTTATATGATAGTTT 733
Query 776 GCTTTGATGTTAGGTCTGAGACATTCACCTTTATTGACGTAGAAAGGTTTTGTCGATTGA 835
||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||
Sbjct 734 GCTTTGATGTTAGGTCTGAAAAATTCACCTTTATTGACGTAAAAAGGTTTTGTCGATTGA 793
Query 836 TCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGACGTCGACATTTATGAGC 895
| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct 794 TAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGACATTCAAGAGC 853
Query 896 TTTATTATGAGGAGGGTATAAATGTCGACAAATATATGGAAGA-TAATGTCGACGCTGAT 954
||||||| | |||||||| ||||||| ||||| |||| || ||||||| ||||||||
Sbjct 854 TTTATTACAAAAAGGGTATAGATGTCGAGGAATATGTGGA-GAATAATGTCAACGCTGAT 912
Query 955 GCCATTAATGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAATGGTCGAAA 1014
|||| |||||||||| || |||||||||||| ||||||||||||||||||||||||||||
Sbjct 913 GCCACTAATGAGTTGTGTGTGTGGATTCTAGCGGATGTTGAGAAACAGGAATGGTCGAAA 972
Query 1015 TATGCCTACACTTGGAGCGATGATAAA-TTCTTCCATCGTCTTGTT-TCCATTGGTGGAG 1072
||||||||||||||| |||||| ||| ||||||| |||| ||| | ||||| | |||||
Sbjct 973 CATGCCTACACTTGGACCGATGA-AAAGTTCTTCCGTCGT-TTGGTATCCATCGCTGGAG 1030
Query 1073 TGACTGCTTCGGGTGAGATAGTGTTTTCGATACGCAAGTATACA-CCTACACAACCGTTT 1131
|||||||||||||||| |||||||||||||| ||||||| || | |||| ||||||||||
Sbjct 1031 TGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTGTA-ATCCTAAACAACCGTTT 1089
Query 1132 TATGTTTTTTACTTCAATCCCGAAAGGAACACTCTGCAACGTGTTGAAATCCAAGGTTTT 1191
||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct 1090 TATGTGTTTTACTTCAATCCCGAAAGGAACAGTCTCCAACGTGTTGAAATTCAAGGTTTT 1149
Query 1192 GGTGAAGG-GTTTAAGAAAACTTGT-AGCGTTTGCACCTTTGCAAACCACGTAGAGGATC 1249
||||||| ||| | |||| ||||| | |||||||||||||| |||||||||||||||||
Sbjct 1150 GGTGAAGCCGTT-ACGAAATCTTGTGA-CGTTTGCACCTTTGTAAACCACGTAGAGGATC 1207
Query 1250 TTAATGTTAATGATTTAGAACAACTCAAGTCAGTCCATCCTCCACTTG 1297
| |||||| | |||||| |||||||||||||||||||||||||| |||
Sbjct 1208 TCAATGTTTACGATTTAAAACAACTCAAGTCAGTCCATCCTCCA-TTG 1254
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 1262 bits (683), Expect = 0.0
Identities = 993/1134 (88%), Gaps = 55/1134 (5%)
Strand=Plus/Plus
Query 182 CTAACCCGCGCCTCTTATTCGCCACCGCAGA-AAACGGCAAGGAAAACGCAAAATCTTGT 240
|||| ||||||||||||||||||| ||||| ||| | ||| ||| | | |||| | |
Sbjct 288 CTAAGCCGCGCCTCTTATTCGCCATGGCAGAGAAA-GTCAACGAAGA-G-AAAAAC---T 341
Query 241 GGTGTGTGGAGCTTCTTCTCGTCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGTCG 300
|||||||||| ||||||||| |||| |||||||||||||||||||||||||| || |||
Sbjct 342 -GTGTGTGGAGGTTCTTCTCGACGCCACAGCTTGAGAATCCATATGAGAAATCCTCATCG 400
Query 301 ACTCTTGTAGCTGCCGCCGAATTTCATGTGAAGTTCTCTCCAGACAATCTACGGATCAAT 360
||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| ||| |
Sbjct 401 ACTCTTGTAGCAGCCGCTGAATTTCATGTTAAGTTCTCTCCAGACAAGCTATATATCTGT 460
Query 361 CATTATTATGACCTAAAATATTTTTCAATTGGCTATGCCTCTGGTTTGATCTATTTATAT 420
|||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 461 CATTGTTATGACCTAAAATATTTTTCAATTGGCTACGCCTCGGGGTTGATCTATTTATAT 520
Query 421 GGTAATAGAGGCCAGGCTAGACCTGTGATATGTAACCCCA-TCACAGGACGGTATGCGAT 479
||| || ||||| |||||| |||| | ||||||||||||| | |||||||||||||| ||
Sbjct 521 GGTGATCGAGGCGAGGCTACACCTCTAATATGTAACCCCACT-ACAGGACGGTATGCCAT 579
Query 480 CTTACCTGATCGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCATTGA 539
||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 580 CTTACCTAATCGGTATACTTACAGAAAGGCGTATAGCTTTTTCGGATTTGACCCGATTGA 639
Query 540 CAAGCAATACAAGGTATTGTCCATGGTCTATCGTCCATCTGGTCCTGGTGATAGTAAAAT 599
|||||||||||||| ||||||||| | |||| | ||||||||||||| ||||||||||
Sbjct 640 CAAGCAATACAAGGCATTGTCCATATTTTATC--C-ATCTGGTCCTGGTCATAGTAAAAT 696
Query 600 TCTTACATTTGGAGCTGGAGATATGATGACGTGGAGAAAGATAAATTGTCTCTTACGACA 659
|||||||||||| |||||| |||||| | |||||||||||||||||||| ||||||| |
Sbjct 697 TCTTACATTTGGGGCTGGACATATGA--A-GTGGAGAAAGATAAATTGTCCCTTACGATA 753
Query 660 TGAT-G---T--TA--A-GAGTGAAGGGGTATGCATCAATGGGGTTTTGTATTACTTAGG 710
|||| | | || | |||||||||| ||||||||||||| |||||||||||||||||
Sbjct 754 TGATAGACATGATATTAAGAGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTAGG 813
Query 711 T-GACACGTCGGATTGGGGTCACGTTAATGATGGTCATG--AT-GTAACGTCTGATTATG 766
| | |||||||||||| | ||||| |||||||||| || ||| ||||||||||
Sbjct 814 TAG-CACGTCGGATTG---T---GTTAAGGATGGTCATGGCATAGTA---TCTGATTATG 863
Query 767 TGATAGTTTGCTTTGATGTTAGGTCTGAGACATTCACCTTTATTGACGTAGAAAGGTTTT 826
||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct 864 TGATAGTTTGCTTTGATATTAGGTCTGAGAAATTCACGTTTATTGACGTAGAAAGGTTTT 923
Query 827 GTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGACGTCGACA 886
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 924 GTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGATGTCGACA 983
Query 887 TTTATGAGCTTTATTATGAGGAGGGTATAAATGTCGACAAATATATGGAAG-ATAATGTC 945
||||| ||||||||||| ||| | |||||| ||||| |||| | ||||| |
Sbjct 984 TTTATAAGCTTTATTATTCGGA---T------GTCGACGAATATGTGGA-GTATAATATT 1033
Query 946 GACGCTGATGCCATTAATGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAA 1005
||| ||||| |||||||||||||||| ||||| |||||||||||||| |||||||| ||
Sbjct 1034 AACGATGATGACATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACAGCAA 1093
Query 1006 TGGTCGAAATATGCCTACACTTGGAGCGATGATAAATTCTTCCATCGTCTTGTTTCCATT 1065
||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||
Sbjct 1094 TGGTCGAAATATGCCTACACTTGGACCGATGATAGATTCTTCCGTCGTCGTGTTTCCATC 1153
Query 1066 GGTGGAGTGACTGCTTCGGGTGAGATAGTGTTTTCGATACGCAAGTATACACCTACA-CA 1124
| ||||| ||||||||||||||| |||||||||||||| | ||| |||||||||| | ||
Sbjct 1154 GCTGGAGGGACTGCTTCGGGTGAAATAGTGTTTTCGATGCTCAAATATACACCTA-AGCA 1212
Query 1125 ACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTGCAACGTGTTGAAATCCA 1184
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1213 ACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCA 1272
Query 1185 AGGTTTTGGTGAAGGGTTTAAGAAAACTTGTAGCGTTTGCACCTTTGCAAACCACGTAGA 1244
|||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1273 AGGTTTTGGTGAAGTGTTAAAGAAAACTTGTAGAGTTTGCACCTTTGTAAACCACGTAGA 1332
Query 1245 GGATCTTAATGTTAATGA-TTTAGAACAACTCAAGTCAGTCCATCCTCCACTTG 1297
||||||||||||| | || |||| |||||||||||||||||||||| ||| |||
Sbjct 1333 GGATCTTAATGTTCACGACTTTA-AACAACTCAAGTCAGTCCATCCCCCA-TTG 1384
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 1003 bits (543), Expect = 0.0
Identities = 896/1059 (85%), Gaps = 53/1059 (5%)
Strand=Plus/Plus
Query 253 TTCTTCTCGTCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGTCGACTCTTGTAGCT 312
|||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 175 TTCTTCTCATCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGCCAACTCTTGTAGCA 234
Query 313 GCCGCCGAATTTCATGTGAAGTTCTCTCCAGACAA--T-CTACGGATCAATCATTATTAT 369
||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |||
Sbjct 235 GCCGCTGAATTTCATGTGAAGTTCTCTCCAGACAAGTTAATACCAATCAATCATTCTTAC 294
Query 370 GACCTAAAATATTTTTCAATTGGCTATGCCTCTGGTTTGATCTATTTATATGGTAATAGA 429
|||| || |||||||||||||||||| |||||||| ||||| ||| | |||||| || ||
Sbjct 295 GACCCAAGATATTTTTCAATTGGCTACGCCTCTGGCTTGATATATATCTATGGTGATCGA 354
Query 430 GGCCAGGCTAGACCTGTGATATGTAACCCCATCACAGGACGGTATGCGATCTTACCTGAT 489
| |||||||||| | ||||||||||||| |||||||||||||| |||||||||| ||
Sbjct 355 TACGTGGCTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGTGATCTTACCTAAT 414
Query 490 CGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCATTGACAAGCAATAC 549
|||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 415 CGGTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGATTGGCAAGCAATAC 474
Query 550 AAGGTATTGTCCATGGTCTATCGTCCATCTGGTCCTGGT-GAT-AGTAAAATTCTTACAT 607
|||| ||||||||| | || | |||||||| ||||||| | | | |||||| |||||||
Sbjct 475 AAGGCATTGTCCATTG-CT-T-ATCCATCTGATCCTGGTCG-TCA-TAAAATACTTACAT 529
Query 608 TTGGAGCTGGAGATATGATGACGTGGAGAAAGAT-AAATTGTCTC-T--TACGACATGAT 663
| |||| ||||| || |||| ||||||||||| ||| |||| | | ||||| || |
Sbjct 530 TAGGAGATGGAG--AT-CTGACATGGAGAAAGATCAAA-TGTCCCGTACCACGACCTGGT 585
Query 664 GTTAAGAGTGAAGGGGTATGCATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGAT 723
||||| |||| ||| |||||||||||||||||||||||| |||| | | | ||
Sbjct 586 ATTAAGGGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTA---G---C-T--GA- 635
Query 724 TGGGGTCACGTTAATGATGGTCATGATGTAACGTCTGATTATGTGATAGTTTGCTTTGAT 783
| | | ||||| | | | | | | ||||||||||||||||||||||||||||
Sbjct 636 ----G--A-G-AAATGA--G-C-T-A-G--A-GTCTGATTATGTGATAGTTTGCTTTGAT 678
Query 784 GTTAGGTCTGAGACATTCACCTTTATTGACGTAGAAAGGTTTTGTCGATTGATCAACTAT 843
||||||||||||| |||||| | |||||||||||| ||| ||||||||||||| |||||
Sbjct 679 GTTAGGTCTGAGAAATTCACATATATTGACGTAGAGAGGATTTGTCGATTGATAAACTAC 738
Query 844 AAGGGAAAATTAGCTGTGATTTATTGGGAGGATGACGTCGACATTTATGAGCTTTATTAT 903
||||| ||||||||| ||||||||||||||||||| ||||||||||||||| || || ||
Sbjct 739 AAGGGCAAATTAGCTATGATTTATTGGGAGGATGATGTCGACATTTATGAGATTAATCAT 798
Query 904 GA-GGA-GGGTATAAATGTCGACAAATATATGGAAGATAATGTCGACGCTGATGCCATTA 961
| || ||| | || | | || || ||| |||| || ||| |||| | |||||||| ||
Sbjct 799 -ATGGCTGGGAAGAA-TCTTGATAAGTATTTGGAGGAAAATCTCGATGTTGATGCCACTA 856
Query 962 ATGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAATGGTCGAAATATGCCT 1021
||||||||| | ||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 857 ATGAGTTGCATGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTCTAAATATGCCT 916
Query 1022 ACACTTGGAGCGATGATAAATTCTTCCATCGTCTTGTTTCCATTGGTGGAGTGACTGCTT 1081
||||||||| |||||||| |||||||| ||||| ||||||||| ||||| |||| ||
Sbjct 917 ACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATTGCTGGAGCCACTGTTT 976
Query 1082 CGGGTGAGATAGTGTTTTCGATACGCAAGTATACACCTACACAACCGTTTTATGTTTTTT 1141
||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||| |
Sbjct 977 CGGGTGAAATAGTGTTTTCGATACGCAAGTACACATCTAAACAACCGTTTTATGTTTTCT 1036
Query 1142 ACTTCAATCCCGAAAGGAACACTCTGCAACGTGTTGAAATCCAAGGTTTTGGTGAAGGGT 1201
|||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||| |
Sbjct 1037 ACTTCAATCCCGAATCGAACACTCTCCAACGTGTAGAAACCCAAGGTTTTGGTGAAGCAT 1096
Query 1202 TTAAG--A-AAACTTGTAGCGTTTGCACCTTTGCAAACCACGTAGAGGATCTTAATGTTA 1258
||||| | |||||||||||||| ||||||||| ||||||||||||| ||||| ||||||
Sbjct 1097 TTAAGGCAGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGAGAATCTTGATGTTA 1156
Query 1259 ATGATTTAGAACAACTCAAGTCAGTCCATCCTCCACTTG 1297
| |||||| ||||||||||||||| |||||||||| |||
Sbjct 1157 ACGATTTAAAACAACTCAAGTCAGGCCATCCTCCA-TTG 1194
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 568 bits (307), Expect = 6e-161
Identities = 451/521 (87%), Gaps = 7/521 (1%)
Strand=Plus/Plus
Query 759 TGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGACATTCACCTTTATTGACGTAGA 818
||| ||||||||||||||||||||||| | |||||||| |||||||||| ||| |||| |
Sbjct 1059 TGAGTATGTGATAGTTTGCTTTGATGTGACGTCTGAGAAATTCACCTTTGTTGGCGTACA 1118
Query 819 AAGGTTTTGTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGA 878
|| |||||||| |||||||||||| ||||| || |||| |||||| ||||||||||||||
Sbjct 1119 AAAGTTTTGTCTATTGATCAACTACAAGGGCAAGTTAGATGTGATCTATTGGGAGGATGA 1178
Query 879 CGTCGACATTTATGAGCTTTATTA-TGAG-GAGGGTATAAATGTCGACAAATATATGGAA 936
||||||||| ||||| ||| ||| | | || || || |||| | ||| ||||
Sbjct 1179 TGTCGACATTCATGAGATTTGTTACTTTGCGAAGG-----ATCTCGATGAGTATTTGGAC 1233
Query 937 GATAATGTCGACGCTGATGCCATTAATGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAG 996
|| ||| | ||||||||||||| ||| ||||||| | ||||| ||||||| |||||||||
Sbjct 1234 GAAAATCTTGACGCTGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAG 1293
Query 997 AAACAGGAATGGTCGAAATATGCCTACACTTGGAGCGATGATAAATTCTTCCATCGTCTT 1056
|||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1294 AAACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCAC 1353
Query 1057 GTTTCCATTGGTGGAGTGACTGCTTCGGGTGAGATAGTGTTTTCGATACGCAAGTATACA 1116
||||||||| ||||| |||||||||||||| |||||||||||||| |||||||| |||
Sbjct 1354 CTTTCCATTGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACA 1413
Query 1117 CCTACACAACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTGCAACGTGTT 1176
||| |||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 1414 TCTAAACAACCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTT 1473
Query 1177 GAAATCCAAGGTTTTGGTGAAGGGTTTAAGAAAACTTGTAGCGTTTGCACCTTTGCAAAC 1236
|||||||||||||||||||||| ||||| || ||||||||| ||| ||||||||| ||||
Sbjct 1474 GAAATCCAAGGTTTTGGTGAAGCGTTTAGGACAACTTGTAGTGTTCGCACCTTTGTAAAC 1533
Query 1237 CACGTAGAGGATCTTAATGTTAATGATTTAGAACAACTCAA 1277
||| ||||||||||| ||||||| |||||||||||||||||
Sbjct 1534 CACATAGAGGATCTTGATGTTAACGATTTAGAACAACTCAA 1574
Score = 364 bits (197), Expect = 9e-100
Identities = 338/403 (84%), Gaps = 22/403 (5%)
Strand=Plus/Plus
Query 253 TTCTTCTCGTCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGTCGACTCTTGTAGCT 312
|||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||
Sbjct 637 TTCTTCTCATCGCCTCAGCTTGAGAATACATATGAGAAAACGTCGTCAACTCTTGTAGCA 696
Query 313 GCCGCCGAATTTCATGTGAAGTTCTCTCCAGACAA-TC--TACGGATCAATCAT-TATTA 368
||||| ||||||||||||||||||||||||||||| || ||| |||| ||| | | | |
Sbjct 697 GCCGCTGAATTTCATGTGAAGTTCTCTCCAGACAAGTCAATACCGATCTATC-TGTCTGA 755
Query 369 TGACCTAAAATATTTTTCAATTGGCTATGCCTCTGGTTTGATCTATTTA-TATGGTAATA 427
|||| || |||| ||||||||||||| |||||||| ||||||||| | ||| || |
Sbjct 756 AGACCCAAGATATGTTTCAATTGGCTACGCCTCTGGCTTGATCTATA-ACTATTGTGGTC 814
Query 428 GAGGCCAGGCTAGACCTGTGATATGTAACCCCATCACAGGACGGTATGCGATCTTACC-T 486
|| | || ||||||| | ||||||||||||| |||||||||||||||||||||||| |
Sbjct 815 GATACGTGGGTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGCGATCTTACCAT 874
Query 487 GATCGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCATTGACAAGCAA 546
|||| ||||| || |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 875 -ATCGTTATACTTATAGAAAGGCGTATAGTTTTTTCGGGTTTGACCCGATTGACAAGCAA 933
Query 547 TACAAGGTATTGTCCATGGTC-T-ATCGTCCATCTGGTCCTGGT-GATAGTAAAATTCTT 603
||||||| |||||| | || | || || || ||||||||| | ||||||| |||||
Sbjct 934 TACAAGGCCTTGTCCCT--TCCTTAT-GTAGAT--GGTCCTGGTCG-TAGTAAAGTTCTT 987
Query 604 ACATTTGGAGCTGGAGATATGATGACGTGGAGAAAGAT-AAAT 645
|||||||||||||||||| ||| | |||||||| || ||||
Sbjct 988 ACATTTGGAGCTGGAGATCTGAC-A--TGGAGAAATATTAAAT 1027
> AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7030155-7031378 REVERSE LENGTH=1224
Length=1224
Score = 348 bits (188), Expect = 9e-95
Identities = 297/348 (85%), Gaps = 13/348 (4%)
Strand=Plus/Plus
Query 951 TGATGCCATTAATGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAATGGTC 1010
|||||||||| ||||| ||| | ||||| ||||||||||||| |||||| ||||||||||
Sbjct 819 TGATGCCATTGATGAGATGCATGTGTGGGTTCTAGAGGATGTCGAGAAAAAGGAATGGTC 878
Query 1011 GAAATATGCCTACACTTGGAGCGATGATAAATTCTTCCAT-CGTCTTGTTTCCATTGGT- 1068
|||||||||||||||||||| ||| |||||||| | || | | || |||||| | |||
Sbjct 879 GAAATATGCCTACACTTGGACCGAGGATAAATTATACCGTTC-TCAGGTTTCCGT-GGTT 936
Query 1069 GGAGTGACTGCTTCGGGTGAGATAGTGTTTTCGATACGCAAGTATACACCT-ACACAACC 1127
||| |||||||||||||||| |||||||||||||| |||||||||||| || | ||||||
Sbjct 937 GGAATGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTATACATCTGA-ACAACC 995
Query 1128 GTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTGCAACGTGTTGAAATCCAAGG 1187
||||||||||| |||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct 996 GTTTTATGTTTACTACTTCAATCCCGAAAGGAACAATCTCCGACGTGTTGAAATCCAAGG 1055
Query 1188 TTTTGGTGAAGGGTTTAAGAAAACTTG-TAGC-GTTTGCACCTTTGCAAACCACGTAGAG 1245
||||| ||| ||||| ||| ||| || | |||| |||||||| | | |||||||||
Sbjct 1056 TTTTG---AAGCGTTTACTAAAT-TTGGTA-CAGTTTACACCTTTGTAGATCACGTAGAG 1110
Query 1246 GATCTTAATGTTAATGATTTAGAACAACTCAAGTCAGTCCATCCTCCA 1293
|||||||||||| | ||||| |||| ||||||||||||||||||||
Sbjct 1111 GATCTTAATGTTTACAATTTAAAACATTTCAAGTCAGTCCATCCTCCA 1158
> AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744
FORWARD LENGTH=1275
Length=1275
Score = 291 bits (157), Expect = 2e-77
Identities = 308/377 (82%), Gaps = 26/377 (7%)
Strand=Plus/Plus
Query 934 GAAG-ATAATGTCG-ACGCTGATGCCATTAATGAGTTGCGTTTGTGGATTCTAGAGGATG 991
|||| || |||| | || |||||||||||||| ||||| | ||||| ||||||||||||
Sbjct 846 GAAGAATTATGTAGAAC-CTGATGCCATTAATAAGTTGAATGTGTGGGTTCTAGAGGATG 904
Query 992 TTGAGAAACAGGAATGGTCGAAATATGCCTACACTTGGAGCGATGATAAATTCTTCCATC 1051
| |||||||||||||||| |||||||||||||||||||| |||||||| |||||| | ||
Sbjct 905 TAGAGAAACAGGAATGGTAGAAATATGCCTACACTTGGACCGATGATATATTCTTTCGTC 964
Query 1052 GTC-T--TGTTTCCATTGGT----GGAGTGACTGCTTCGGGTGAGATAGTGTTTTCGATA 1104
||| | |||||| ||| | || || |||||| |||||| ||||| ||||||||
Sbjct 965 GTCGTGAGGTTTCCGTTGCTCCAACGACTG-CTGCTTGGGGTGACATAGTCTTTTCGATG 1023
Query 1105 CGCAAGTATACACCTACACAACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACT 1164
| ||||||| ||| |||||| ||||||||||| |||||||||||||||| || ||||
Sbjct 1024 TGTGAGTATACTCCTGGACAACCATTTTATGTTTTCTACTTCAATCCCGAAAAGAGCACT 1083
Query 1165 CTGCAACGTGTTGAAATCCAAGGTTTTGGTGAAGG-GTTTAAGAAAACTTGTAGCGTTTG 1223
|| |||||||||||||||||||||||||||||||| |||| | | |||||||
Sbjct 1084 CTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGGCGTTT--G-----T---AGCGTTTA 1133
Query 1224 CACCTTTGCAAACCACGTAGAGGATCTTAATGTTAATGATTTAGAACA-ACTCAAGTCAG 1282
|||||||| | || ||||||| |||||||||||||| |||||| || | ||||||| ||
Sbjct 1134 CACCTTTGTAGACGACGTAGAAGATCTTAATGTTAAGGATTTAAAA-ATACTCAAGCCA- 1191
Query 1283 TCCA-TCCTCCACTTGA 1298
|||| | ||||| ||||
Sbjct 1192 TCCAATGCTCCATTTGA 1208
> AT3G56890.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:21062990-21063717 REVERSE LENGTH=660
Length=660
Score = 135 bits (73), Expect = 8e-31
Identities = 186/238 (78%), Gaps = 17/238 (7%)
Strand=Plus/Plus
Query 963 TGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAATGG-TCGAAATATGCCT 1021
||||||| |||||||| ||||||||||||||||||||||||||||| || || |||| ||
Sbjct 261 TGAGTTGTGTTTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGGTC-AAGTATGTCT 319
Query 1022 ACACTTGGAGCG-ATGA-TAAATTC-TTCCATCGT-CTTGTTTCCA-TTGGTGGAGTGAC 1076
|||||| | || | || | || || || || | | |||| || ||| |||||||||
Sbjct 320 ACACTTT-ACCGGA-GAATGAAGTCCTTGGTTCCTGCGAGTTTTCAGTTGCTGGAGTGAC 377
Query 1077 TGCTTCGGGTGAGATAGTGTTTTC-GATACGCAAGTATACACCTACACAACCGTTTTATG 1135
||| | | | |||| |||||| | || | ||||||||| || | | |||| ||||
Sbjct 378 TGCAA-GAG-GCGATATTGTTTTGTG-TATG-AAGTATACATGTA-A-A-CCGTACTATG 430
Query 1136 TTTTTTACTTCAATCCCGAAAGGAACACTCTGCAACGTGTTGAAATCCAAGGTTTTGG 1193
| || |||||| ||||||||| ||| || || ||| ||||||||||||||||||||||
Sbjct 431 TATTCTACTTCGATCCCGAAAAGAAAACCCTCCAAAGTGTTGAAATCCAAGGTTTTGG 488
> AT5G38810.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:15540484-15541540 REVERSE LENGTH=780
Length=780
Score = 73.1 bits (39), Expect = 6e-12
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 963 TGAGTTGCGTTTGTGGATTCTAGAGGATGTTGAGAAACAGGAATGGTC 1010
||||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct 582 TGAGTTGTGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTC 629
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64357098690
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5