BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343817
Length=2763
Score E
Sequences producing significant alignments: (Bits) Value
AT2G22660.2 | Symbols: | Protein of unknown function (duplicat... 3618 0.0
AT4G37900.1 | Symbols: | Protein of unknown function (duplicat... 1162 0.0
AT2G22640.1 | Symbols: HSPC300, BRK1, ATBRK1 | BRICK1, putative... 348 2e-94
> AT2G22660.2 | Symbols: | Protein of unknown function (duplicated
DUF1399) | chr2:9627408-9631081 FORWARD LENGTH=2789
Length=2789
Score = 3618 bits (1959), Expect = 0.0
Identities = 2322/2493 (93%), Gaps = 41/2493 (2%)
Strand=Plus/Plus
Query 220 ATGGATAAGGAGAAAGATCATGAAGTGGAGTGGCTTGAAGCTCAGAAGATTGAGATAAGC 279
|||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 89 ATGGATAAGGAGAAGGATCATGAAGTGGAGTGGCTTGAAGCTCAGAAGATAGAAATAAGC 148
Query 280 GTTGACTTACTAGCTGCAGCTAAACAACAGCTTTTGTTCCTCGCTACTGTTGATAGGAAT 339
||||||||| |||||||||| |||||||| ||||||||||| | |||||||||||||||
Sbjct 149 GTTGACTTATTAGCTGCAGCGAAACAACACCTTTTGTTCCTTGAAACTGTTGATAGGAAT 208
Query 340 CGATGGCTCTACGATGGTCCTGCGCTCGAAAAAGCCATCTACAGGTACAATGCTTGTTGG 399
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 209 CGATGGCTCTACGATGGTCCTGCGCTTGAAAAAGCCATCTACAGGTACAATGCTTGTTGG 268
Query 400 CTTCCTTTGCTTGCCAAATACTATGAGTCATCATCGGTTAGTGAAGGGTCTTTGGTCCCT 459
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 269 CTTCCTTTGCTTGTTAAATACTCTGAGTCATCATCGGTTAGTGAAGGGTCTTTGGTCCCT 328
Query 460 CCTCTTGATTGTGAATGGATTTGGCATTGCCACAGGCTTAATCCGGTGAGGTATAAGTT- 518
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 329 CCTCTTGATTGTGAATGGATTTGGCATTGTCACAGGCTTAATCCGGTGAGGTATAA-TTC 387
Query 519 TGACTGTGAGAAATTTTACGGGAGAGTTCTCGACAATTCTGGTGTTGTATCTTCTGTTAA 578
|||||||||| ||||||||||||||||||||||||||||||| ||| | ||||||||| |
Sbjct 388 TGACTGTGAGCAATTTTACGGGAGAGTTCTCGACAATTCTGGAGTTCTTTCTTCTGTTGA 447
Query 579 TGGGAACTGCAAATTGCAAACTGAAGATTTGTGGAAAAGATTGTATCCTGAGGAACCTTA 638
|||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 448 TGGGAACTGCAAATTGAAAACTGAAGATTTGTGGAAAAGATTGTACCCTGATGAACCTTA 507
Query 639 TGAGCTAGACTTGAATAAGGTAGACTCGGAGGACATCTCTAAGAAATCTTCAGATCTTGA 698
|||||| |||||| |||| |||||| |||||||||||| |||||||||||| ||||||
Sbjct 508 TGAGCTTGACTTGGATAACATAGACTTAGAGGACATCTCTGAGAAATCTTCAGCTCTTGA 567
Query 699 GAAATGCACCAATTATGATCTAGTTTCAGCGGTTAAGAGGCAGAGCCCATTTTACTACCA 758
|||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 568 GAAATGCACCAAATATGATCTTGTTTCAGCTGTTAAGAGGCAGAGCCCATTTTACTACCA 627
Query 759 GGTTTCGAGATCCCATGTAAACAATGA-AGTTTTTCTACAAGAAGCTGTTGCTAGATATA 817
||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 628 GGTTTCGAGGTCCCATGTAAACAGTGACA-TTTTTCTACAAGAAGCTGTTGCTAGATATA 686
Query 818 AGGGGTTTCTCTATCTGATTAAGACGAACAGAGAAAGGTCTTTAAAACGGTTTTGTGTTC 877
||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||
Sbjct 687 AGGGGTTTCTCTATCTGATAAAGATGAACAGAGAAAGGTCTTTAAAAAGGTTTTGTGTTC 746
Query 878 CGACTTATGATGTTGACCTTATCTGGCACACACATCAGCTGCATCCAGTTTCTTACTGTG 937
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 747 CGACTTACGATGTTGACCTTATCTGGCACACACATCAGCTGCACCCAGTTTCTTACTGTG 806
Query 938 ATGATATGGAGAAGCTCATTGGTAAGGTGTTGGAGCATGATGACACAGATTCTGACCGAG 997
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 807 ATGATATGGTGAAGCTCATTGGTAAAGTGTTGGAGCATGATGACACAGATTCTGACCGAG 866
Query 998 GCAAAGGTAAGAAACTCGATACCGGTTTTTCTAAGACTACTGCACAATGGGAGGAGATGT 1057
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 867 GCAAAGGTAAGAAGCTCGATACCGGTTTTTCTAAGACTACTGCACAATGGGAAGAGACAT 926
Query 1058 TTGGTACAAGGTACTGGAAAGCCGGTGCAATGCATAGAGGCAAGACACCTGCACCTGTCA 1117
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 927 TCGGTACAAGGTACTGGAAAGCCGGTGCAATGCATAGAGGCAAGACACCTGTACCTGTCA 986
Query 1118 CAACTTCTCCTTATGCTTCTGATGTTTTGGTCAAAGAACCAACTGCAAAAGAGGATATCC 1177
||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||
Sbjct 987 CAAATTCTCCTTATGCTTCTGATGTTTTGGTCAAAGACCCAACTGCAAAAGACGATTTCC 1046
Query 1178 AGAATTTAATCCAATTTCCAGAGGTGGAAGTTGTTGAGGTTCTCTTGGAGATTATCGGGG 1237
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 AGAATTTAATCCAATTCCCAGAGGTGGAAGTTGTTGAGGTTCTCTTGGAGATTATCGGGG 1106
Query 1238 TTAGAAACTTACCAGATGGACATAAGGGAAAGATCTCGGTTATGTTCAGTAAAACTCGGC 1297
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 1107 TTAGAAACTTACCAGATGGACATAAGGGAAAGGTCTCGGTTATGTTCAGTAAAACTCAGC 1166
Query 1298 CTGATTCTCTTTTCAATGCTGAACGTAGACTGACCATTTTATCCGAGGTTGGGGAAAAGC 1357
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 CGGATTCTCTTTTCAATGCTGAACGTAGACTGACCATTTTATCCGAGGTTGGGGAAAAGC 1226
Query 1358 AAGTAGCTACTTTCCAGTGTGAACCTACAGGAGAGCTTGTTTTCAAACTTATTTCCTCTT 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1227 AAGTAGCTACTTTCCAGTGTGAACCTACAGGAGAGCTTGTTTTCAAACTTATTTCCTGTT 1286
Query 1418 CACCGTCTAAGATACCAGTTTCAAGAGAGCCTAAAAACTTGGGTTTTGCTTCTTTATCAC 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287 CACCGTCTAAGATACCAGTTTCAAGAGAGCCTAAAAACTTGGGTTTTGCTTCTTTATCAC 1346
Query 1478 TAAAGGAGTTTCTATTTCCAGTTATTACTCAACTCTCTGTTGAGAAGTGGTTGGAGTTAA 1537
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347 TAAAGGAGTTTCTGTTTCCAGTTATTACTCAACTCTCTGTTGAGAAGTGGTTGGAGTTAA 1406
Query 1538 CACCCAGTAAAGGTAG-CAAAGCAGAT-CAAAAACCTATAAGCCTGCGAGTCGCTGTCTC 1595
|||||||||||||||| |||| ||||| | ||| || |||||||||||||||||||||||
Sbjct 1407 CACCCAGTAAAGGTAGTCAAA-CAGATACGAAACCC-ATAAGCCTGCGAGTCGCTGTCTC 1464
Query 1596 GTTTACTCCACCAATACGCAGTCCATCAGTCTTACACATGGTTCAATCAAGACCACCGTG 1655
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1465 GTTTACTCCACCAGTACGCAGTCCATCAGTCTTACACATGGTTCAATCAAGACCATCGTG 1524
Query 1656 GAAAGGCTCTTGCTTCTTTCCAATTATGGGAAAGTCCCGTCTTGCTAAGAGTTCAACACA 1715
||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct 1525 CAAAGGCTCTTGCTTCTTTCCAATCATTGGAAAGTCCCGTCTTGCTAAAAGTTCAACACA 1584
Query 1716 CATTGTTGATGAAACCCAAACAGAGGTGATCACACTTCAAATTAGGAACTCCATTGATGG 1775
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1585 CATTGTTGATGAAACCCAAACAGAGGTGATCACACTTCAAATTAGGAACTCCGCTGATGG 1644
Query 1776 AGCAAAACTTAAAGATGATCAAAGACAAGTTATTGGTGTGATAGACTCTGGTGAAACTCG 1835
|| || ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||
Sbjct 1645 AGGAATACTTAAAGATGATCAGAGACAAGTTATGGGTGTGACAGACTCTGGTGAAACTCG 1704
Query 1836 AGTGCTTGCGGATTATGCTGGTAGTTTCTGGTCTTTATTGGACTCGAAATGGTCACTTAA 1895
|||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1705 CGTGCTTGCGGTTTATACTGGTAGTTTCTGGTCTTTGCTGGACTCGAAATGGTCACTTAA 1764
Query 1896 GCAAACAAATGCCTCCACTGCAGATAATCCTCTCTTTGAGCTTTTGGGTCCTCGAGTGGT 1955
||||| ||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||
Sbjct 1765 GCAAATAAACGCCTCCACTGCAGATAATCCGCTCTTTGAGATTTTGGGCCCTCGAGTGGT 1824
Query 1956 GAACATTTTCTCGGGTAGGAAGCTGGATTATGAACCAAAACACTGCGCAAACCTTAGAAG 2015
||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1825 GAAAATTTTCTCGGGGAGAAAGCTGGATTATGAACCAAAACACTGCGCAAACCTTAGAAG 1884
Query 2016 TGATCAAGATTTCATGACTCTTGTGGAATTTTCCAAGCAACATCCATATGGGAAAGCTGT 2075
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1885 TGATCTAGATTTCATGACTCTTGTGGAATTTTCCAAGCAACATCCATATGGAAAAACTGT 1944
Query 2076 AGGATTGGTTGATATGAGATTTGGTTCCATTGAGGCAAGTGTGAAAGAGAATTGGTTGGT 2135
||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
Sbjct 1945 GGGATTGGTTGATATGAGATTTGGTTCCATTGAGGC--G----AAAGAGAATTGGTTGCT 1998
Query 2136 TTTGCCCGGAATCGTATCTGCTTTCATACTCCATACTGTTCTGAAGAAAGGAGTTTTTGA 2195
||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1999 TTTACCCGGAATCGTATCTGCTTTCATACTCCATACTGTTCTGAAGAAAGGAGGTTCTGA 2058
Query 2196 TGGCTTCAATGTCACAACCAAAGAAATAAAAGAGGAAAGCAAACCGACTAAACTTGTTAC 2255
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
Sbjct 2059 AGGCTTCAATGTCACAACCAAAGATATAAAAGAGGAAAGCAAACAGACTAAACTTGTTGC 2118
Query 2256 TGCGACAGAAAATAAAT-TGAATGCAAAATCTACGAATGTGGAGACTGCAG-CTGCTATC 2313
||||||||||||||| | |||||||||| ||||||||||||||||| || |||||||
Sbjct 2119 TGCGACAGAAAATAA-TGTGAATGCAAACTCTACGAATGTGGAGACC-CAAACTGCTATT 2176
Query 2314 ACAGCTCCTAAAAAAGGCAGCGGTTGCGGTGGTGGCTGTAGTGGTGAATGCGGAAACATG 2373
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2177 ACAGCCCCTAAAAAAGGCAGCGGTTGCGGCGGTGGCTGTAGTGGTGAATGCGGAAACATG 2236
Query 2374 GTGAAAGCAGCTAATGCTAGCGGTTGTGGGAGTAGTTGTAGTGGAGAATGCGGAGACATG 2433
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 2237 GTGAAAGCAGCTAATGCTAGCGGTTGCGGCAGTAGTTGTAGTGGAGAATGCGGAGACATG 2296
Query 2434 GTGAAATCAG-ATGCAACTGCTAGTGGCTGTGGTAGTGGCTGTAGCGGTGAATGTGGAAA 2492
|||||||||| | |||| |||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 2297 GTGAAATCAGCA-GCAAATGCTAGCGGCTGCGGTAGTGGTTGTAGCGGTGAATGTGGAAA 2355
Query 2493 TATGGTGAAAGCAGCGAACGCTAGCGGTTGTGGCAGTGGTTGCAGTGGAGAATGCGGAGA 2552
||||||||||||||| |||||||| ||| | | ||||| | ||| | || |||
Sbjct 2356 TATGGTGAAAGCAGCTAACGCTAGTGGT-G-G----TGGTT--A-TGG-G---GCT-AGA 2401
Query 2553 CATGGTGAAAGCAGCGAAAGCTAGCGGTTGCGGCAgtggttgtggtggtggttgtggtgg 2612
|| |||||||| ||||||||||||||||| ||||||| |||||||| || || ||
Sbjct 2402 --TGC--AAAGCAGCTAAAGCTAGCGGTTGCGGGGGTGGTTGCGGTGGTGGCTGCGGCGG 2457
Query 2613 tggATGCGGAGACATGGTGAAAGCAGCTAAA-GCTAGCGGTTGCGGCAGTGGTTGTGGCG 2671
||| |||||||||||||||||| ||| |||| |||||||| || ||| |||||||| ||
Sbjct 2458 TGGTTGCGGAGACATGGTGAAATCAG-TAAATGCTAGCGGCTGTGGCGGTGGTTGTAACG 2516
Query 2672 GTGGATGCGGAGACATGGTGAAAGCAGCA-AAT 2703
||| ||||||| ||||||||||||||||| |||
Sbjct 2517 GTGAATGCGGAAACATGGTGAAAGCAGCATAAT 2549
Score = 195 bits (105), Expect = 3e-48
Identities = 294/380 (77%), Gaps = 34/380 (9%)
Strand=Plus/Plus
Query 2392 AGCGGTTGTGG-GAGTAGTTGTAGTGGAGAATGCGGAGACATGGTGAAATCAGATGCAAC 2450
|||||||| || | || | |||||||| ||||||||| ||||||||||| ||| | ||
Sbjct 2195 AGCGGTTGCGGCG-GTGGCTGTAGTGGTGAATGCGGAAACATGGTGAAAGCAGCT--AA- 2250
Query 2451 TGCTAGTGGCTGTGGTAGTGGCTGTAGCGGTGAATGTGGAAATATGGTG-AA--AGCAGC 2507
|||||| || || || ||| | ||||| || ||||| ||| | |||||| || ||||||
Sbjct 2251 TGCTAGCGGTTGCGGCAGTAGTTGTAGTGGAGAATGCGGAGACATGGTGAAATCAGCAGC 2310
Query 2508 GAACGCTAGCGGTTGTGGCAGTGGTTGCAGTGGAGAATGCGGAGACATGGTGAAAGCAGC 2567
|| |||||||| || || |||||||| || || ||||| ||| | ||||||||||||||
Sbjct 2311 AAATGCTAGCGGCTGCGGTAGTGGTTGTAGCGGTGAATGTGGAAATATGGTGAAAGCAGC 2370
Query 2568 GAAAGCTAGCGGTTGCGGCAgtggttgtggtggtggttgtggtgg-tggATGCGGAGACA 2626
|| | || | | |||||||||||| ||| || | ||||| || ||
Sbjct 2371 -TAA-C--GC---T-----A------GTGGTGGTGGTTATGG-GGCTAGATGCAAAG-CA 2410
Query 2627 TGGTGAAAGC-AGC--TAAAGCTAGCGGTTGCGGCAGTGGTTGTGGCGGTGGATGCGGAG 2683
| | ||||| ||| | | | |||||||| |||| || |||||||| |||||||
Sbjct 2411 -GCT-AAAGCTAGCGGTTGCGGGGGTGGTTGCGGTGGTGGCTGCGGCGGTGGTTGCGGAG 2468
Query 2684 ACATGGTGAAAGCAGCAAATGCTAGCGGCTGCGGCGGTGGTTGTAGCGGTGAATGCGGAA 2743
||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 2469 ACATGGTGAAATCAGTAAATGCTAGCGGCTGTGGCGGTGGTTGTAACGGTGAATGCGGAA 2528
Query 2744 ACATGGTGAAAGCAGCCTAA 2763
|||||||||||||||| |||
Sbjct 2529 ACATGGTGAAAGCAGCATAA 2548
Score = 84.2 bits (45), Expect = 6e-15
Identities = 58/64 (91%), Gaps = 2/64 (3%)
Strand=Plus/Plus
Query 2700 AAATGCTAGCGGCTGCGGCGGTGGTTGTAGCGGTGAATGCGGAAACATGGTGAAAGCAGC 2759
||| || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2189 AAAGGC-AGCGGTTGCGGCGGTGGCTGTAGTGGTGAATGCGGAAACATGGTGAAAGCAGC 2247
Query 2760 CTAA 2763
|||
Sbjct 2248 -TAA 2250
Score = 76.8 bits (41), Expect = 1e-12
Identities = 92/116 (79%), Gaps = 6/116 (5%)
Strand=Plus/Plus
Query 2326 AAAGGC-AGCGGTTGCGGTGGTGGCTGTAGTGGTGAATGCGGAAACATGGTGAAAGCAGC 2384
||| || ||||| || || ||||| |||| |||||||||||||||||||||||||||||
Sbjct 2485 AAATGCTAGCGGCTGTGGCGGTGGTTGTAACGGTGAATGCGGAAACATGGTGAAAGCAGC 2544
Query 2385 -TAATGCTAGCGGTTGTGG-GAGTAGTTGTAGTGGAGAATGCGGAGACATGGTGAA 2438
|||| || | ||||||| | || | |||| ||||||||| | | |||||||
Sbjct 2545 ATAAT-CTGGTAGTTGTGGTG-GT-GACCTAGTAGAGAATGCGAAAATGTGGTGAA 2597
> AT4G37900.1 | Symbols: | Protein of unknown function (duplicated
DUF1399) | chr4:17821737-17824627 REVERSE LENGTH=2428
Length=2428
Score = 1162 bits (629), Expect = 0.0
Identities = 1552/1976 (79%), Gaps = 150/1976 (8%)
Strand=Plus/Plus
Query 245 TGGAGTGGCTTGAAGCTCAGAAGATTGAGATAAGCGTTGA-CTTACTAGCTGCAGCTAA- 302
|||||||| ||||| |||||||| || ||||||||||| ||| | |||||||| ||
Sbjct 90 TGGAGTGGAACGAAGCACAGAAGATAGATATAAGCGTTGACCTT-TTGGCTGCAGCCAAG 148
Query 303 ACAACAGCTTTTGTTCCTCGCTA-CTGTTGATAGGAATCGATGGCTCTACGATGGTCCTG 361
| |||| ||| | ||||||| | |||||||| |||| || || ||||||||||| ||||
Sbjct 149 A-AACACCTTCTCTTCCTCG-GAGCTGTTGATCGGAACCGTTGTCTCTACGATGGCCCTG 206
Query 362 CGCTCGAAAAAGCCATCTACAGGTACAATGCTTGTTGGCTTCCTTTGCTTGC-CAAATAC 420
| ||| ||| |||||||||||| |||||||||| ||||||||| |||||||| | |||||
Sbjct 207 CACTCCAAAGAGCCATCTACAGATACAATGCTTATTGGCTTCCCTTGCTTGCTC-AATAC 265
Query 421 TA-TGAGTCATCATCGGT-TAGTGAAGGGTCTTTGGTCCCTCCTCTTGATTGTGAATGGA 478
| ||||| || || | | || |||| | || |||||||||||||| |||||||||
Sbjct 266 -ACCGAGTCTTCTTCTATCT-GTCAAGGACCATTAGTCCCTCCTCTTGACTGTGAATGGG 323
Query 479 TTTGGCATTGCCACAGGCTTAATCCGGTGAGGTATAAGTTTGACTGTGAGAAATTTTACG 538
|||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || |
Sbjct 324 TTTGGCATTGCCACAGGCTTAATCCGGTGAGGTATAAGACTGATTGTGAGCAATTCTATG 383
Query 539 GGAGAGTTCTCGACAATTCTGGTGTTGTATCTTCTGTTAATGGGAACTGCAAATTGCAAA 598
|||||||||| ||||||||||| ||||||||||| || ||||| |||||||||| ||||
Sbjct 384 GGAGAGTTCTGGACAATTCTGGCGTTGTATCTTCCGTAAATGGAAACTGCAAATCACAAA 443
Query 599 CTGAAGATT-TGTGGAAAAGATTGTATCCTGA-GGAACCTTATGAGCTAGACTT-GAATA 655
||||| | | | |||||||||||||||||| | ||| |||||||| || || || | |
Sbjct 444 CTGAA-ACTCTATGGAAAAGATTGTATCCT-ACGGAGCCTTATGACCTTGATTTTGCC-A 500
Query 656 AGGTAGA-CTCGGAGGACATCTCTAAGAAATCTTCAGATCTTGAGAAATGCACCAATTAT 714
| | | | ||| ||| || | | || ||| ||| |||||||||||| |||| ||||
Sbjct 501 ATGCA-ATCTCAGAGC-CAGC---A-GATGTCT-CAGCTCTTGAGAAATGTACCACTTAT 553
Query 715 GATCTAGTTTCAGCGGTTAAGAGGCAGAGCCCATTTTACTACCAGGTTTCGAGATCCCAT 774
||||| |||| ||| || ||||| || |||||||||| |||||||||||| ||| | |||
Sbjct 554 GATCTTGTTTTAGCTGTCAAGAGACAAAGCCCATTTTTCTACCAGGTTTCAAGAGCTCAT 613
Query 775 GTAAACAATGAAGTTTTTCTACAAGAAGCTGTTGCTAGATATAAGGGGTTTCTCTATCT- 833
||| | ||||| || ||||| ||||||||||| |||||||| || | |||||||| ||
Sbjct 614 GTAGATAATGACGTCTTTCTGCAAGAAGCTGTGGCTAGATACAAAGCATTTCTCTA-CTT 672
Query 834 GATTAAGACG-AACAGAGAAAGGTCTTTAAAACGGTTT-TGTGTTCCGACTTATGATGTT 891
||| ||| | ||| ||||||| || | |||| ||| |||||||||||||| ||| ||
Sbjct 673 GATCAAGG-GTAACCGAGAAAGATCGATCAAACT-TTTCTGTGTTCCGACTTACGATATT 730
Query 892 GACCTTATCTGGCACACACATCAGCTGCATCC-AGTTTCTTACTGTGATGATATGGAG-A 949
|| ||||||||||||||||||||||| ||| | | | ||||| || ||||| || | |
Sbjct 731 GATCTTATCTGGCACACACATCAGCTTCATGCTA-TCTCTTATTGCAATGATTTG-ACTA 788
Query 950 AGCTCATTGGTAAGGTGTTGGAGCATGATGACACAGATTCTGACCG-AGGCAAAGGTAAG 1008
|| | ||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||
Sbjct 789 AGATGATTGGTAAGGTCTTGGAGCATGATGATACAGACTCTGACCGTAG-CAAAGGTAAG 847
Query 1009 AAACTCGATACCGGTTTTTCTAAGA-CTACTGCACAATGGGAGGAGATGTTTGGTAC-AA 1066
|| || ||||| ||||| ||| || ||||||| |||||||| || | |||||| | ||
Sbjct 848 AAGCTTGATACTGGTTTCTCTG-GAACTACTGCTCAATGGGAAGAAACATTTGGT-CGAA 905
Query 1067 GGTACTGGAAAGCCGGTGCAATGCATAGAGGCAAGACACCTGCA-CCTGTCACAACTTCT 1125
|||| |||||||||||||| ||| | | || || || || | || ||||||||||||
Sbjct 906 GGTATTGGAAAGCCGGTGCTATGAACCGTGGTAATACCCCAA-AGCCAGTCACAACTTCT 964
Query 1126 CCTTATGCTTCTGATGTTTTGGTCAAAGAAC-CAACTGCAAAAGAGGAT-A-TCC-AGAA 1181
||||||| || || | | | || |||||| ||| ||| |||||||| | ||| ||||
Sbjct 965 CCTTATG-TT-TG-T-TCT-GG--AAAGAAATCAATTGCGAAAGAGGAAGAGTCCCAGAA 1017
Query 1182 TTTAATCCAATTTCCAGAGGTGGAAGTTGTTGAGGTTCTCTTGGAGATTATCGGGGTTA- 1240
| ||||||||| |||||||||| |||| |||| ||| ||||||||||| | |||||||
Sbjct 1018 TGTAATCCAATATCCAGAGGTGAAAGTCATTGAAGTTATCTTGGAGATTGTTGGGGTTAA 1077
Query 1241 GAAACTTACCAGATGGACATAAGGGAAAGATCTCGGTTATGTTCAGTAAAACTCGGCCTG 1300
||| ||||||||||| || || |||||| ||| ||| ||||||| ||||||| || |
Sbjct 1078 GAA-CTTACCAGATGCTCACAAAGGAAAGGTCTTTGTTCTGTTCAGCAAAACTCAACCAG 1136
Query 1301 ATTCTCT-TTTCAATGCTGAACGTAGACTGACCATTTTATCCGAGG-TTG-GGG-AAAAG 1356
||||||| ||| || ||||| ||||| || ||| ||||||| ||| ||| ||| |||||
Sbjct 1137 ATTCTCTGTTT-AACGCTGAGCGTAGGCTTACCGTTTTATCTGAGTCTTGTGGGGAAAAG 1195
Query 1357 CAAGTAGCTACT-TTCCAGTGTGAACCTACAGGAGAGCTT-GTTTTCAAACTTATTTCCT 1414
||||| ||| | ||||||||||| ||||||||||||||| |||| ||| || || || |
Sbjct 1196 CAAGTTGCTT-TGTTCCAGTGTGAGCCTACAGGAGAGCTTAGTTTCCAA-CTAATGTC-T 1252
Query 1415 CTTCACCGTCTAAGATACCAGTTTCAAGAGAGCCTAAAAACTTGGGTTTTGCTTCTTTAT 1474
| | | ||| | | | ||||| | || || ||| |||||||||
Sbjct 1253 -T-C-C-----AAG-T-C---T---AAGAG--CTTA-------GG-TTTCACTTCTTTAT 1286
Query 1475 CACTAAAGGAGTTTCTATT-TCCAGTTATTACTCAACTCTCTGTTGAGAAGTGGTTGGAG 1533
| | ||||||||| || |||||| | ||| ||||||||||||||||||||||||||
Sbjct 1287 CGTTTTCGGAGTTTCT-TTCTCCAGT-A--ACTAAACTCTCTGTTGAGAAGTGGTTGGAG 1342
Query 1534 TTAACACCCAGTAAA-GGTAGCAAAG-CAGATCAAA--AA-CCTATAAGCCT-GCGAGTC 1587
|||||||| | |||| || | |||| ||||| | || || || | | | |||||
Sbjct 1343 TTAACACCAACTAAAAGGG-G-AAAGGCAGATGATCCGAATCCCATCT-CTTTGAGAGTC 1399
Query 1588 GCTGTCTCGTTTACTCCACCAA-TACGCAGTCCATCAGT-CTTACACATGGTTCAATCAA 1645
||||||||||| || || |||| | || |||||| | || || ||| |||||||| |||
Sbjct 1400 GCTGTCTCGTTCACCCCGCCAACT-CGAAGTCCAACTGTTCT-ACATTTGGTTCAAGCAA 1457
Query 1646 GACCA-C-CGTGGAAAGGCTCTTGCTTCTTTCCAATTATGGGAAAG-TCCCGTCTTGCTA 1702
||||| | | || ||||||||||| ||| |||| || | ||||| | | |||||||||
Sbjct 1458 GACCATCAC-TG-AAAGGCTCTTGTTTCCTTCCTATGCTCCGAAAGGTAC-GTCTTGCTA 1514
Query 1703 AGAGTTCAACACACATTGTTGATGAAACCCAAACAGAGGTGATCACACTTC-AAATTAGG 1761
|||||| |||| | |||||||||||||| ||||||||||||||| || || |||| |||
Sbjct 1515 AGAGTTTTACACGCGTTGTTGATGAAACCGAAACAGAGGTGATCA-ACCTCCAAATGAGG 1573
Query 1762 AACTCCATTGATGGAGCAAAACTTAAAGATGATCA-AAGACAAGTTATTGGTGTGATAGA 1820
||||||| ||| | |||| | |||| |||| | |||||||||||||||||| | |||
Sbjct 1574 AACTCCAATGACGCAGCACCA---AAAGGTGAT-AGAAGACAAGTTATTGGTGTAAAAGA 1629
Query 1821 CTCTGGTGAAACTCGAGTGCTT-G-CGGATTATGCTGGTAGTTTCTGGTCTTTATTGGAC 1878
| |||||||||| | || || | | || |||| ||| | |||||||||| | | |||
Sbjct 1630 GTGTGGTGAAACTT-A-TGTTTTGGCAGAGTATGATGGCACTTTCTGGTCTCTGCTCGAC 1687
Query 1879 TCGAAATGGTCACTTAAGCAAACA---AATGCCT-CCACTGCAGATAATCCTCTCTTTGA 1934
|| ||||||||||||||||| ||| ||| ||| |||| |||| |||||| |||||
Sbjct 1688 TCAAAATGGTCACTTAAGCAGACATGCAAT-CCTGCCAC---AGATGGTCCTCTGTTTGA 1743
Query 1935 GCTTTTGGGTCCTCGAGTGGTGAACATTTT-CTC-GGGTAGGAAGCTGGATTATGAACCA 1992
||||| ||| ||||| ||||||| | ||| ||| ||| || |||||||| ||||| |||
Sbjct 1744 GCTTTCCGGTACTCGAATGGTGAA-AGTTTACTCCGGG-AGAAAGCTGGAGTATGAGCCA 1801
Query 1993 AAACACTGCGCAAACCTTAGAAGTGATCAAGATTTCATGACT-CTTGTGGAATTTTCCAA 2051
||||| ||| |||| || ||||| || ||||||||||||||| || || ||||| || ||
Sbjct 1802 AAACATTGCTCAAAGCTAAGAAGCGAGCAAGATTTCATGACTGCT-GTTGAATTCTCAAA 1860
Query 2052 GCAACATCCATATGGGAAAGCTGTAGGATTGGTTGATATGAGATTT-GGTTCCATTGAGG 2110
||||||||| ||||| |||||||| || || | ||| ||| | || ||||| |||||||
Sbjct 1861 GCAACATCCTTATGGTAAAGCTGTGGGGTTACTCGATTTGA-AGTTCGGTTCTATTGAGG 1919
Query 2111 CAAGTGTGAAAGAGAATTGGTTGGTTTTGCCCGGAATCGTATCTGCTTTCATACTC 2166
||| || | || ||| || |||||||||| ||||| |||||| |||||||||||
Sbjct 1920 CAAATG--A--GA-AAT-GGCTGGTTTTGCCTGGAATGGTATCTTCTTTCATACTC 1969
> AT2G22640.1 | Symbols: HSPC300, BRK1, ATBRK1 | BRICK1, putative
| chr2:9623068-9624218 FORWARD LENGTH=753
Length=753
Score = 348 bits (188), Expect = 2e-94
Identities = 208/218 (95%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAAAGCAGGAGGGATCACGAACGCAGTGAACGTAGGTATCGCTGTTCAAGCTGAT 60
||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct 216 ATGGCGAAAGCTGGAGGGATCACGAACGCAGTAAACGTAGGAATCGCTGTTCAAGCAGAT 275
Query 61 TGGGAGAATCGAGAATTCATTTCACATATCTCTCTTAATGTTCGTCGTCTCTTCGAATTC 120
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 276 TGGGAGAATCGAGAATTTATCTCACATATCTCTCTTAATGTTCGTCGTCTCTTCGAATTC 335
Query 121 CTTGTCCAATTTGAATCGACCACAAAGAGCAAGTTGGCTTCTTTGAATGAGAAGTTGGAT 180
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CTTGTTCAATTTGAATCAACCACAAAGAGCAAGTTGGCTTCTTTGAATGAGAAGTTGGAT 395
Query 181 CTGTTGGAACGTCGCTTGGAGATGCTGGAAGTGCAAGT 218
|||||||||||||||||||| |||||||| ||||||||
Sbjct 396 CTGTTGGAACGTCGCTTGGAAATGCTGGAGGTGCAAGT 433
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137256756048
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5