BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg343889
Length=2310
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23300.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3489 0.0
AT4G37250.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1264 0.0
AT5G67280.1 | Symbols: RLK | receptor-like kinase | chr5:268422... 246 6e-64
> AT2G23300.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:9914608-9917130 FORWARD LENGTH=2322
Length=2322
Score = 3489 bits (1889), Expect = 0.0
Identities = 2159/2289 (94%), Gaps = 20/2289 (1%)
Strand=Plus/Plus
Query 26 tcttcttcttcttctcttctctgtttcttgtttcctctgctttaaactctgatggagttc 85
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 50 TCTTCTTCTTCTTCTCTTCTCTGTTTCTTCTCTCCTCTGCTTTAAACTCTGATGGAGTTC 109
Query 86 tcttAATGAGTTTCAAATACTCTGTTCTTCTTGATCCTCTCTCTTTATTACAGTCATGGA 145
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 110 TCTTACTGAGTTTCAAATACTCTGTTCTTCTTGATCCTCTCTCTTTATTACAATCATGGA 169
Query 146 ACTACGACCACGACAATCCTTGTTCTTGGCGAGGTGTGTTATGTAATAACGATTCAAGAG 205
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 170 ACTACGACCACGACAATCCTTGTTCATGGCGAGGTGTGTTGTGTAATAACGATTCAAGAG 229
Query 206 TTGTTACTTTATCTCTACCAAACTCTAACCTCGTTGGTTCGATTCCTTCCGATCTGGGTT 265
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 TTGTTACTTTATCTCTCCCAAACTCTAACCTCGTTGGTTCGATTCCTTCCGATCTGGGTT 289
Query 266 TCCTCCAAAACCTTCAAAGTCTTAATCTTTCCAACAATTCACTCAATGGGTCATTACCGG 325
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 290 TCCTCCAAAACCTCCAAAGTCTTAATCTTTCCAATAATTCACTCAATGGGTCATTACCGG 349
Query 326 TTGAGTTTTTCGCCGCCGATAAGCTCCGGTTTCTTGATTTATCAAACAACTTGATCTCCG 385
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 350 TTGAGTTTTTCGCCGCCGATAAGCTCCGGTTTCTTGATTTATCAAATAACTTGATCTCCG 409
Query 386 GCGAGATCCCTGTGTCAATCGGAGATTTGCACAACCTCCAGACGTTAAATCTCTCCGATA 445
||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 410 GCGAGATCCCTGTATCAATCGGAGGTTTACACAACCTCCAGACGTTAAATCTCTCCGATA 469
Query 446 ACATCTTTACCGGAAAATTACCAACCAATTTAGCGTCTCTTGGAAGCTTAA-GAGAGGTT 504
||||||| ||||| ||| ||||| | || |||||||||||||||||||||| | ||||||
Sbjct 470 ACATCTTCACCGGGAAACTACCAGCTAACTTAGCGTCTCTTGGAAGCTTAACG-GAGGTT 528
Query 505 TCTCTGAAGAACAACTACTTCTCCGGCGAGTTTCCCGGCGGCGGATGGAGATCGGTTCAG 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 TCTCTGAAGAACAACTACTTCTCCGGCGAGTTTCCCGGCGGCGGATGGAGATCGGTTCAG 588
Query 565 TTTCTTGACATTTCCTCGAATCTAATCAATGGATCACTCCCACCTGATTTCTCCAGCGAT 624
| ||| |||||||| || ||||||||||| || ||||||||||||||||||||| ||||
Sbjct 589 TATCTAGACATTTCTTCAAATCTAATCAACGGTTCACTCCCACCTGATTTCTCCGGCGAC 648
Query 625 AATCTCCGGTACCTGAATGTCTCGTATAACCAAATCTCCGGCGAGATCCCTCCGAATGTC 684
|||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 649 AATCTCCGATACCTGAATGTCTCGTATAACCAAATCTCCGGAGAGATTCCTCCGAATGTT 708
Query 685 GGTGCCGGTTTTCCTCAAAACGCTACCGTTGATTTCTCCTTCAACAATTTAACCGGTTCA 744
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 709 GGTGCCGGTTTTCCTCAAAACGCCACCGTTGATTTCTCCTTCAACAATTTAACCGGTTCA 768
Query 745 ATCCCAGATTCTCCGGTTTTCCTTAACCAGAAATCAATTTCGTTTTCCGGAAACCCGGGT 804
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 769 ATCCCAGATTCTCCGGTTTACCTTAACCAGAAATCAATTTCGTTTTCCGGAAACCCGGGT 828
Query 805 TTATGCGGTGGTCCGACCCGAAACCCGTGTCCCATTCCTTCCTCTCCAGCCACCGTCTCC 864
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct 829 TTATGCGGAGGTCCGACCCGAAACCCGTGTCCCATTCCTTCATCTCCGGCCACCG--T-- 884
Query 865 GGCGCCGTCGCTCCACCTACGTCTACGCCTGCACTAGCAGCCATACCAAAATCAATCGGG 924
| ||| ||||| || ||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 885 -----C-TCG--CCACCAACCTCTACACCTGCACTCGCAGCTATACCTAAATCAATCGGG 936
Query 925 TCAAATTC-AGAAACCGAACCGGACAACAACTCAAATCCTCGAACAGGATTAAGACCAGG 983
|| || || ||||||||||||| |||||||||||||||||||||| || |||||||||||
Sbjct 937 TCTAA-TCGAGAAACCGAACCGAACAACAACTCAAATCCTCGAACCGGGTTAAGACCAGG 995
Query 984 AGTTATAATCGGAATCATAGTCGGAGATATCGCCGGAATCGGAATCCTCGCTCTTATCTT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 AGTTATAATCGGAATCATAGTCGGAGATATCGCCGGAATCGGAATCCTCGCTCTTATCTT 1055
Query 1044 CCTCTACGTTTACAAATACAAGAAGAACAAAACCGTGGAGAAGAAGAACGATCAAAGTCT 1103
| |||||||||| |||||||| || ||||| || ||||||||||||||| |||| || ||
Sbjct 1056 CTTCTACGTTTATAAATACAAAAACAACAAGACAGTGGAGAAGAAGAACAATCATAGCCT 1115
Query 1104 AGAAGCTCACGAAGCTAAAGACACAACTTCGTTATCACCATCATCATCAACAACTACATC 1163
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 AGAAGCTCATGAAGCTAAAGACACAACTTCGTTATCACCATCATCATCAACAACTACATC 1175
Query 1164 TTCTTCATCACCAGAACAATCAAGTAGATTCGGAAAATGGTCATGTCTCCGTAAGAATCA 1223
||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct 1176 TTCTTCATCTCCAGAACAATCAAGCAGATTTGCAAAATGGTCATGTCTCCGTAAGAATCA 1235
Query 1224 AGAAACCGATGAAACCGAAGAAGAAGACGACGAAAATCAACGATCAGGAGAGTTTGGAGA 1283
|||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||
Sbjct 1236 AGAAACCGATGAAACCGAAGAAGAAGACGAAGAAAATCAACGGTCAGGAGAGATTGGAGA 1295
Query 1284 GAACAAGAAAGGGACTTTAGTAACCATTGATGGAGGAGAGAAAGAACTTGAAGTTGAAAC 1343
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1296 GAATAAGAAAGGGACTTTAGTAACCATTGATGGAGGAGAGAAAGAGCTTGAAGTTGAAAC 1355
Query 1344 TTTGCTTAAAGCTTCTGCTTACATTTTGGGAGCCACCGGTTCGAGTATAATGTACAAGAC 1403
||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1356 TTTGCTTAAGGCTTCTGCTTACATTTTAGGAGCCACTGGTTCGAGTATAATGTACAAGAC 1415
Query 1404 GGTTCTTGAGGATGGGACGGTTCTTGCGGTTCGTCGGTTAGGTGAGAACGGTTTAAGTCA 1463
||||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 1416 TGTTCTTGAGGACGGTACGGTTCTCGCGGTTCGTCGGTTAGGTGAGAATGGTTTGAGTCA 1475
Query 1464 ACAACGCCGGTTTAAGGACTTTGAGGCACATATTCGAGCTATTGGTAAACTGGTTCACCC 1523
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1476 ACAACGCCGGTTTAAAGACTTTGAGGCACATATTCGAGCTATTGGTAAATTGGTTCACCC 1535
Query 1524 GAATTTGGTTCGTCTCCGTGGATTCTATTGGGGCACCGACGAGAAATTGGTCATTTACGA 1583
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1536 GAATTTGGTACGTCTTCGTGGATTCTATTGGGGCACCGACGAGAAATTGGTCATTTACGA 1595
Query 1584 TTTTGTCCCTAACGGCAGTCTCGTCAACGCCCGTTACAGGAAAGGAGGGTCGTCGCCGTG 1643
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1596 TTTTGTTCCTAACGGCAGTCTCGTCAACGCCCGTTACAGGAAAGGAGGGTCTTCGCCGTG 1655
Query 1644 CCATTTACCATGGGAGACTCGGCTCAAGATAGCGAAAGGTTTGGCTCGTGGGCTTGCTTA 1703
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1656 CCATTTACCGTGGGAGACTCGGCTCAAGATAGTAAAAGGTTTGGCTCGTGGGCTTGCTTA 1715
Query 1704 CCTCCACGACAAGAAACATGTGCACGGTAACTTGAAACCTAGTAACATACTTTTGGGCCA 1763
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1716 CCTCCACGACAAGAAACATGTGCACGGTAACTTGAAGCCTAGTAACATACTCTTGGGCCA 1775
Query 1764 AGATATGGAGCCCAAGATCGGCGATTTTGGGCTCGAAAGGCTTCTCGCCGGAGATACAAG 1823
||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1776 AGATATGGAGCCCAAGATCGGAGATTTCGGGCTCGAAAGGCTTCTCGCCGGGGATACTAG 1835
Query 1824 CTATAACCGAGCTAGTGGATCATCTCGGATTTTCAGTAGCAAGAGATTGACAGCGTCCTC 1883
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1836 CTATAACCGAGCTAGTGGATCATCTCGGATTTTCAGTAGCAAGCGATTGACAGCATCCTC 1895
Query 1884 GCGTGAATTTGG-ATCGATCGGGCCCACACCGAGCCCAAGTCCAAGCTCCGTTGGGCCTA 1942
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1896 GCGTGAATTTGGTACC-ATCGGGCCCACACCGAGCCCAAGTCCAAGCTCCGTTGGGCCCA 1954
Query 1943 TATCTCCATATTGCGCACCCGAGTCGCTCCGCAATCTCAAACCAAACCCAAAATGGGATG 2002
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1955 TATCTCCCTATTGCGCACCCGAGTCGCTCCGCAATCTCAAACCAAACCCGAAATGGGATG 2014
Query 2003 TGTTTGGGTTTGGAGTGATCCTCCTTGAGCTGCTCACAGGAAAAATTGTGTCGATAGACG 2062
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 2015 TGTTTGGGTTTGGAGTGATCCTCCTCGAGCTGCTCACGGGAAAAATAGTGTCGATAGACG 2074
Query 2063 AGGTCGGGGTAGGAAATGGGTTGACGGTAGAAGACGGGAACCGGGCGCTGATAATGGCTG 2122
|||| ||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||
Sbjct 2075 AGGTGGGGGTAGGAAATGGGCTGACCGTAGAGGACGGGAACCGGGCGCTAATAATGGCTG 2134
Query 2123 ATGTAGCGATTCGCTCTGAATTGGAAGGCAAAGAGGACTTTTTACTTGGCCTTTTCAAGT 2182
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2135 ATGTAGCGATCCGCTCCGAATTGGAAGGCAAAGAGGACTTTTTACTTGGCCTTTTCAAAT 2194
Query 2183 TGGGATATAGTTGTGCATCTCAAGTTCCACAAAAGAGACCGACCATGAAAGAGGCATTAG 2242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 2195 TGGGATATAGTTGTGCATCTCAAATTCCACAAAAGAGACCGACCATGAAAGAGGCGTTAG 2254
Query 2243 TAGTGTTTGAAAGAT-TCCCTATTAGCTCATCGGCTAAGTCTCCATCGTACCATTACGGA 2301
||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 2255 TAGTGTTTGAAAGATATCC-TATTAGCTCATCGGCTAAGAGTCCATCGTACCATTACGGA 2313
Query 2302 CACTATTAA 2310
|||||||||
Sbjct 2314 CACTATTAA 2322
> AT4G37250.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr4:17527650-17530506 REVERSE LENGTH=2761
Length=2761
Score = 1264 bits (684), Expect = 0.0
Identities = 1835/2365 (78%), Gaps = 181/2365 (8%)
Strand=Plus/Plus
Query 31 ttcttcttctctt-ctctgtttcttg-tttcctctgctttaaactctgatggagtt-ctc 87
|||||||||| || ||||| || ||| |||||||||||||||||||||||| ||| |
Sbjct 343 TTCTTCTTCTTTTGCTCTG-TT-TTGAGTTCCTCTGCTTTAAACTCTGATGG-GTTGGTT 399
Query 88 ttAATG-AGTTTCAAATACTCTGTTCTTCTTGATCCTCTCTCTTTATTACAGTCATGGAA 146
|| ||| ||||| |||| |||||||||| |||||||||| |||||||||||| |||||||
Sbjct 400 TTGATGAAGTTT-AAATCCTCTGTTCTTGTTGATCCTCTGTCTTTATTACAGACATGGAA 458
Query 147 CTACGACCACGACAA-TCCTTGTTCTTGGCGAGGTGTGT-TATGTAATAACGATTC-AAG 203
||| | ||||| || ||| ||||||||| |||| | | | |||||||||||||| ||
Sbjct 459 TTACAAACACGA-AAGTCCATGTTCTTGGAGAGGAATCTCT-TGTAATAACGATTCTAA- 515
Query 204 AGTTGTT-ACTTTATCTCTACCAAACTCT-AACCTCGTTGGTTCGATTCCTTCCGATCTG 261
|| | || ||||| ||||| || || ||| | | || |||||||||||||||| ||| ||
Sbjct 516 AG-TCTTAACTTTGTCTCTTCCCAATTCTCAGCTTC-TTGGTTCGATTCCTTCTGATTTG 573
Query 262 GGTTTCCTC-CAAAAC-CTTCAAAGTCTTAATCTTTCCAACAATTCAC-TCAATGGGTCA 318
|| || ||| | ||| ||||||||||| |||||||||| ||||| | |||||||| ||
Sbjct 574 GG-TT-CTCTCTTAACACTTCAAAGTCTCGATCTTTCCAATAATTC-CTTCAATGGGCCA 630
Query 319 TTACCGGTTGAGTTT-TTCGCCGCCGATA-AGCTCCGGTTT-CTTGATTTATCAAACAAC 375
||||||||| ||| ||| || | | | |||| | |||| |||||| | || | |||
Sbjct 631 TTACCGGTT-TCTTTCTTCAACG-CTAGAGAGCTTC-GTTTCCTTGATCTCTCTAGTAAC 687
Query 376 TTGATCTCCGGCGAGATCCC-TGTGTCAATCGGAGAT-TTGCACAA-CCTCCAGACGTTA 432
||||||||||||| ||||| | | |||| || ||| || ||||| | || | || ||
Sbjct 688 ATGATCTCCGGCGAAATCCCTTCCG-CAATTGGTGATCTT-CACAATCTTCTA-ACCCTA 744
Query 433 AATCTCTCCGATAACATCTTTACCGGAAAATTACCAACCAATTTAGCGTCTCTTG-GAAG 491
|||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||| |||
Sbjct 745 AATCTCTCTGATAATGCCTTGGCGGGAAAGTTACCTACAAATTTGGCGTC-GTTGAGAAA 803
Query 492 CTTAA-GAGAGGTTTCTCTGAAGAACAACTACTTCTCCGGCGAGTTTCCCGGCGGCGGAT 550
||||| | | ||||||| || |||| || ||||| ||||||||| || || |||||| |
Sbjct 804 CTTAACG-GTGGTTTCTTTGGAGAATAATTACTTTTCCGGCGAGATT-CC--CGGCGGTT 859
Query 551 GGAGA-TCGGTTCAGTTTCTT-GACATTTCCTCGAATCTAATCAATGGATCACTCCCACC 608
||||| | ||| || ||||| ||| | || |||||||| |||||||| || || || ||
Sbjct 860 GGAGAGT-TGTTGAG-TTCTTAGACCTGTCGTCGAATCTGATCAATGGCTCGCTTCCTCC 917
Query 609 TGATTTCTCCAGC-GATA-A-TCTCCGGTACCTGAATGTCTCGTATAACCAAATCTCCGG 665
||||| | || |||| | ||||| |||| | |||||||||| |||||||||||||||
Sbjct 918 GGATTT-T--GGCGGATATAGTCTCCAGTACTTAAATGTCTCGTTTAACCAAATCTCCGG 974
Query 666 CGAGATCCCTCCGAATG-TCGGTGCCGGTTTTCCTC-A-AAACGCT-ACCGTTGATTTCT 721
||| || || ||| | | |||| | | ||||| | | ||||| | ||||||||| |||
Sbjct 975 CGAAATTCCACCGGA-GATCGGAGTC-AATTTCC-CAAGAAACG-TCACCGTTGATCTCT 1030
Query 722 CCTTCAACAATTTAACCGGTTCAATCCCAGATTCTCCGGTTTTCCTT-AACCAGAAATC- 779
|||||||||||||||||||| ||||||| |||||||||||||| ||| |||||| ||||
Sbjct 1031 CCTTCAACAATTTAACCGGTCCAATCCCTGATTCTCCGGTTTT-CTTAAACCAGGAATCA 1089
Query 780 AATTTCGTTTTCCGGAAACCCGGGTTTATGCGGTGGTCCGACCCGAAACCCGTGTCCCAT 839
|||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct 1090 AATTTC-TTTTCAGGAAACCCGGGTCTATGCGGTGAACCGACCCGAAACCCGTGTCTTAT 1148
Query 840 TCCTTCCTCTCCAG-CCACCGTCTCCGGCGCCGTCGCTCCACCTACGTCTACGCCTGCAC 898
|||||||| || | | | |||||||| |||| || | ||| |||||||| || |||
Sbjct 1149 CCCTTCCTCGCC-GTCTATCGTCTCCGAAGCCGACG-T--ACCGACGTCTACACCAGCAA 1204
Query 899 TAGCAGCCATACC-AAAATCAATCGGGTCAAATTCAGAAACCGAACC----GGACAAC-- 951
| || || ||||| || | ||||||| ||||| | | ||||| || |||||
Sbjct 1205 TCGCCGCAATACCGAACA-CAATCGGTTCAAACCCGGTTACCGATCCAAATTCACAACAA 1263
Query 952 A---ACTCAAATCCTCGAACAGGATTAAGACCAGGAGTTATAATCGGAATCATAGTCGGA 1008
| || ||||||| ||||| || ||| |||| ||||||||||| || ||| ||||||||
Sbjct 1264 ACCGACCCAAATCCCCGAACCGGGTTACGACCCGGAGTTATAATAGGGATCGTAGTCGGA 1323
Query 1009 GATATCGCCGGAATCGGAATCCTCGCTC-TTATCTTCCTCTACGTTTACAAATACAAGAA 1067
|||||||| ||||||||||||||||| | | || ||||||||| | |||| || ||||||
Sbjct 1324 GATATCGCTGGAATCGGAATCCTCGC-CGTGATTTTCCTCTACATCTACAGATGCAAGAA 1382
Query 1068 GAACAAAACCGTGGAGAAGAAGAACGATC-A-AAGTCTAGAAGCTCACGAAGCTAAAGAC 1125
|||||| | ||||| || || ||| | | | ||| | | ||| || ||| | ||||
Sbjct 1383 GAACAAGATAGTGGATAACAACAAC-AACGACAAG-C-A-AAGAACA-GAA---ACAGAC 1434
Query 1126 ACAACTT-CGTTATCACCATCATCATCAACAACTACATCTTCTTCATCACCAGAACAATC 1184
|||| || |||||||| | ||| | | | | | |||||||| ||||||||| | ||
Sbjct 1435 ACAA-TTACGTTATCA--A-CAT--T-TTC-A-T-CTTCTTCTTCTTCACCAGAAGAGTC 1484
Query 1185 AAGTAGATTC-GGAAAATGGTCATGTCTCCGTAAGA-AT-C---AA-GAAACCG-ATGAA 1236
||| |||||| || |||||||| ||||| || || | || | || || |||| ||||
Sbjct 1485 AAGAAGATTCAGG-AAATGGTCGTGTCTACG-AAAAGATCCTGAAACGACACCGTCTGAA 1542
Query 1237 -ACCGAAGAAGAAGACGACGAAAATC-AACGATCAGGAGAGTTTGGA-G-AGAA-CAA-- 1289
| ||||| ||||| || ||| | | || || | | | ||| | | | || |||
Sbjct 1543 GA-AGAAGATGAAGATGATGAAGA-CGAA-GA--AAGCG-GTTACAATGCA-AATCAACG 1595
Query 1290 GAAAGG-G---AC--TTTAGTAACCATTGATGGAGGAGAGAAAGAACTTGAAG-TTGAAA 1342
| ||| | || ||||| ||| ||||| |||||| ||| | || || |||| |
Sbjct 1596 GTCAGGAGATAACAAGTTAGTGACCGTTGAT---GGAGAG-AAGGAGATGGAGATTGAGA 1651
Query 1343 CTTTGCTTAAAGCTTCTGCTTACATTTTGGGAGCCACCGGTTCGAGTATAATGTA-CAAG 1401
|| ||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| |||
Sbjct 1652 CTCTGCTTAAGGCTTCAGCTTATATTTTAGGAGCCACAGGTTCGAGTATAATGTATAAAG 1711
Query 1402 ACGGTTCTTGAGGATGGGACGGTTCTT-GCGGTTCGTCGGTTAGGTGAGAACGGTTTAAG 1460
| |||||||| || || | |||| || ||||||||||| | ||||| |||||||| |
Sbjct 1712 -CCGTTCTTGAAGACGGTAGGGTT-TTCGCGGTTCGTCGACTCGGTGAAAACGGTTT-A- 1767
Query 1461 TCAACAACGCCGGTTTAAGGACTTTGAGGCACATATTCGAGCTATTGGTAAACTGGTTCA 1520
|| || |||||||||||||| |||||| | || |||||||| ||||| ||| |||||||
Sbjct 1768 TC-TCAGCGCCGGTTTAAGGATTTTGAGCCGCACATTCGAGCCATTGGGAAATTGGTTCA 1826
Query 1521 CCCGAATTTGGTTCGTCTCCGTGGATTCTATTGGGGCACCGACGAGAAATTGGTCATTTA 1580
||||||||||||| | || |||| ||||||||||| |||||||||||| | ||||||||
Sbjct 1827 CCCGAATTTGGTTAGACTTTGTGGGTTCTATTGGGGTACCGACGAGAAACTAGTCATTTA 1886
Query 1581 CGATTTTGTCCCTAACGGCAGTCTCGTCAACGCCCGTTACAGGAAAGGAGG-G--TCGTC 1637
||||||||||||||||||||| ||||||||| |||||||| | |||||||| | || ||
Sbjct 1887 CGATTTTGTCCCTAACGGCAGCCTCGTCAACCCCCGTTACCGAAAAGGAGGAGGGTCTTC 1946
Query 1638 G-C-C-GTGCCATTTACCATGGGAGACTCGGCTCAAGATAGCGAAAGGT--TTGGCTCGT 1692
| | || || |||| ||||| ||||||||||||||||| ||||| ||| | |||
Sbjct 1947 TTCACCGTATCACCTACCGTGGGAAACTCGGCTCAAGATAGC-AAAGGGCATTG-CACGT 2004
Query 1693 GGGCTTGCTTACCTCCACGACAAGAAACATGTGCACGGTAACTTGAAACCTAGTAACATA 1752
||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||| ||||||
Sbjct 2005 GGGCTGGCTTATCTCCACGAGAAGAAGCATGTGCATGGAAACTTGAAGCCTAGCAACATA 2064
Query 1753 CTTTTGGGCCAAGATATGGAGCCCAAGATCGGCGATTTTGGGCTCGAAAGGCTTCTCGCC 1812
||||||||||| || ||||| ||||| || |||||||| || |||||||||||||| |
Sbjct 2065 CTTTTGGGCCATGACATGGAACCCAAAATAGGCGATTTCGGACTCGAAAGGCTTCTTACA 2124
Query 1813 GGAGATACAAGCTATAACCGAGCTAGTGGATCATCTCGGATTTTCAGTAGCAAGAGATTG 1872
|| || |||||||| | |||||| ||||||| ||| ||||||||||||| ||| | ||
Sbjct 2125 GGCGAAACAAGCTACATTCGAGCTGGTGGATCTTCTAGGATTTTCAGTAGTAAGCG-TTA 2183
Query 1873 -ACAGCGTCCTCGCGTGAATT-TGGATCGATCGGGCCCACACCGAGCCCAAGTCCAAGCT 1930
||| | |||||||| ||||| | | || |||||||| ||||| ||||| ||||| ||||
Sbjct 2184 CACAACTTCCTCGCGAGAATTCTCG-TCTATCGGGCCTACACCAAGCCCGAGTCCGAGCT 2242
Query 1931 CCGTTGGGCCTATATCTCCATATTGCGCACCCGAGTCGCTCCGCAATC-TCAAACCAAAC 1989
| || ||| | || || || || |||||||| ||||| |||| || | | ||||| |
Sbjct 2243 CGGTGGGGGCGATGTCACCCTACTGCGCACCAGAGTCTTTCCG-AAGCCTAAAACCGAGT 2301
Query 1990 CCAAAATGGGATGTGTTTGGG-TTTGGAGTGATCCTCCTTGAGCTGCTCACAGGAAAAAT 2048
|| |||||||| || || || |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 2302 CCGAAATGGGACGT-TTACGGCTTTGGAGTGATCCTTCTCGAGCTTCTCACGGGAAAGAT 2360
Query 2049 TGTGTC-GATAGACGAGGTCGGGGTAGGAAATGGG-TTGACGGTAGAAGACGGGAACCGG 2106
|||||| | | || ||| | | | ||||||| || || ||||| || |||||| ||||
Sbjct 2361 TGTGTCTGTT-GAAGAGATTGTGCTAGGAAACGGACTT-ACGGTTGAGGACGGGCACCGC 2418
Query 2107 GC-GCTGATAATGGCTGATGTAGCGATTCGCT-CTGAATTGGAAGGCAAAGAGGACTTTT 2164
|| | ||| |||||||||||| ||||| ||| | || || || |||||| | || ||||
Sbjct 2419 GCAG-TGAGAATGGCTGATGTGGCGATCCGCGGC-GAGTTAGATGGCAAACAAGAGTTTT 2476
Query 2165 TACTTGGCCT-TTTCAAGTTGGGATATAGTTGTGCATCTCAAGTTCCACAAAAGAGACCG 2223
|||| | | ||||||||| || ||||| ||||| |||| ||||| |||||||| ||
Sbjct 2477 TACTCGAT-TGTTTCAAGTTAGGCTATAGCTGTGCGTCTCCTGTTCCTCAAAAGAGGCCA 2535
Query 2224 ACCATGAAAGAGGCATTAG-TAGTGT-TTGAAAGATTCCCTATTAGCTCATCGGCTA--A 2279
|| |||||||| | || | | || | |||||||||||| | || ||| || | || |
Sbjct 2536 ACGATGAAAGAATCTTTGGCT-GT-TCTTGAAAGATTCCATCCTAACTCCTCTGTTATTA 2593
Query 2280 -GTCTCCATCGTACCATTACGGACA 2303
|||| |||||| ||||||||||||
Sbjct 2594 AGTCTTCATCGTTCCATTACGGACA 2618
> AT5G67280.1 | Symbols: RLK | receptor-like kinase | chr5:26842270-26845190
REVERSE LENGTH=2480
Length=2480
Score = 246 bits (133), Expect = 6e-64
Identities = 361/467 (77%), Gaps = 31/467 (7%)
Strand=Plus/Plus
Query 1320 AGAGAAAGAACTTGAAGTTGAAAC-TTTGCTTAAAGCTTCTGCTTACATTTTGGGAGCCA 1378
||||||||| |||||| | ||||| || || ||||| || ||||| |||||||||||||
Sbjct 1387 AGAGAAAGAGCTTGAAATCGAAACGCTT-CTCAAAGCATCAGCTTATATTTTGGGAGCCA 1445
Query 1379 CCGGTTCGAGTATAATGTA-CAAGACGGTTCTTGAGGATGGGACGGTTCTTGCGGTTCGT 1437
|||||||||| |||||||| ||| |||| ||| | || || || | | | ||||||||
Sbjct 1446 CCGGTTCGAGCATAATGTATAAAG-CGGTGCTTCAAGACGGAACAGCTGTGGCGGTTCGA 1504
Query 1438 CGGTTAGGTGAGA-ACGGTTTAAGTCAACAACGCCGGTTTAAG-GACTTT-GAGGCACAT 1494
|| ||| ||| | |||||| || | ||||||| || || ||| || || ||
Sbjct 1505 CGAATAGCTGA-ATGCGGTTT-AG------A--CCGGTTT-AGAGA-TTTCGAAGCTCAG 1552
Query 1495 ATTCGAGCTATTGG-TAAACTGGTTCACCCGAATTTGGTTCGTCTCCGTGGATTCTATTG 1553
||||||| ||| ||| | | || || || |||| || | || || ||||||||
Sbjct 1553 GTTCGAGC-CGTGGCTAAGTTAATACATCCAAACCTGGTACGAATTCGCGGTTTCTATTG 1611
Query 1554 GGGCA-CCGACGAGAAA-TTGGTCATTTACGATTTTGTCCCTAACGGCAGTCTCG-TCAA 1610
||| | ||||||||||| || ||||||||||||||||||||||||||||| |||| | ||
Sbjct 1612 GGG-ATCCGACGAGAAACTT-GTCATTTACGATTTTGTCCCTAACGGCAGCCTCGCT-AA 1668
Query 1611 CGCCCGTTACAGGAAAGGAGGG-TCGTCGCCGTGCCATTTACCATGGGA-GACTCGGCTC 1668
|||||||||| |||||| ||| || || || || |||||||| ||||| | ||||||||
Sbjct 1669 CGCCCGTTACCGGAAAGT-GGGCTCCTCTCCTTGTCATTTACCTTGGGACG-CTCGGCTC 1726
Query 1669 AAGATAGCGAAAGGTTTGGCTCGTGGGCTTGCTTACCTCCACGACAAGAAACATGTGCAC 1728
|||||||| ||||| | ||||| ||||| | ||| | ||||||||||| | |||||
Sbjct 1727 AAGATAGCAAAAGGCATAGCTCGCGGGCTAACATACGTACACGACAAGAAGTACGTGCAT 1786
Query 1729 GGTAACTTGAAACCTAGTAACATACTTTTGGGCCAAGATATGGAGCC 1775
|||||| | || ||||| || || ||||||||| ||||||||||||
Sbjct 1787 GGTAACCTCAAGCCTAGCAATATCCTTTTGGGCTTAGATATGGAGCC 1833
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114658044780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5