BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg344061 Length=1629 Score E Sequences producing significant alignments: (Bits) Value AT1G17770.1 | Symbols: SUVH7, SDG17 | SU(VAR)3-9 homolog 7 | ch... 1136 0.0 AT2G24740.1 | Symbols: SDG21, SUVH8 | SET domain group 21 | chr... 1129 0.0 > AT1G17770.1 | Symbols: SUVH7, SDG17 | SU(VAR)3-9 homolog 7 | chr1:6120741-6122822 FORWARD LENGTH=2082 Length=2082 Score = 1136 bits (615), Expect = 0.0 Identities = 886/1014 (87%), Gaps = 30/1014 (3%) Strand=Plus/Plus Query 631 GTGATAGGAAAATCTGGCTTTAAGGAGTTCAGATTCAAATTGGTGAGGAAACCAGACCAA 690 |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 1072 GTGACAGGAAAATCCGGCTTCAAGGAGTTCAGATTCAAATTGGTGAGGAAACCAAACCAA 1131 Query 691 CCAT-CTGGTTATGCAATCTGGAAATCAGTTGAAATTTTGAGGAACCATGACTTGATTGA 749 || | ||| |||||||||||||||| ||||||||| | |||||||||||||||||||||| Sbjct 1132 CC-TCCTGCTTATGCAATCTGGAAAACAGTTGAAAATCTGAGGAACCATGACTTGATTGA 1190 Query 750 TCCAA-GAAATGGTTCTATACTTGGAGATCTTTCTTTTGGAGCAGAGGTTTTACGAGTTC 808 | ||| | || |||| |||||||| |||||||||||||||||| ||| |||||||||||| Sbjct 1191 TTCAAGGCAA-GGTTTTATACTTGAAGATCTTTCTTTTGGAGCTGAGCTTTTACGAGTTC 1249 Query 809 CGCTCGTTAATGAAGTTGATGAAGATGACAAAACGATTCCTGAAGATTTTGACTACATTA 868 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1250 CGCTCGTTAATGAAGTTGATGAAGATGACAAAACGATTCCCGAAGATTTTGATTACATCC 1309 Query 869 GATCTCAGTGTTACTCAGGTATGATGTT---TGA-TCTTAATGTTGATATTCAATCACTT 924 ||||||||| |||| ||||||||| ||| | || || ||||| |||||||||| Sbjct 1310 CCTCTCAGTGTCACTCTGGTATGATGACGCATGAAT-TTCATTTTGATCGTCAATCACTT 1368 Query 925 GGATGCCAGAATTGT-GAG-TCA----TGCA-GTCATCAAAACTGCTCGTGCATGG-GTA 976 ||||||||||||||| || ||| |||| | |||||||||||| | ||| || | | Sbjct 1369 GGATGCCAGAATTGTCGACATCAGCCATGCATG-CATCAAAACTGCACCTGCGTGCAG-A 1426 Query 977 AAAACGGTGGCGAGCTACCATACCATAACAACATTTTGGTTTCTCGTAAACCATTGATTT 1036 |||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 1427 GAAACGGTGACCTGCTACCGTACCATAACAACATTTTGGTTTGTCGTAAACCATTGATTT 1486 Query 1037 ACGAGTGTGGTGGATCTTGTCCCTGCCCC-ATCGATTGCCCAAACCGATTGGTTCAAACC 1095 ||||||| |||||||||||||| |||||| | | ||||||||| ||| |||||||||||| Sbjct 1487 ACGAGTGCGGTGGATCTTGTCCTTGCCCCGACC-ATTGCCCAACCCGGTTGGTTCAAACC 1545 Query 1096 GGTTTGAAGCTCCACTTGGAAGTGTTCAAAACA-GCAAACTGTGGTTGGGGTTTACGTTC 1154 |||||||| ||||| |||||||||||||| ||| | |||||||||||||||||||||||| Sbjct 1546 GGTTTGAAACTCCATTTGGAAGTGTTCAAGACAAG-AAACTGTGGTTGGGGTTTACGTTC 1604 Query 1155 TTGGGATCCAATCCGAGCGGGAACTTTTATCTGCGAGTTTGCCGGTGTGAGCAAGACAAA 1214 |||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||| Sbjct 1605 TTGGGATCCAATCCGAGCCGGAACTTTTATCTGCGAGTTTGCTGGTTTGAGAAAGACAAA 1664 Query 1215 AGAAGAAGTAGAAGAGGATGACGATTACTTGTTCGACACATCTCGGATTTATCATACCTT 1274 ||||||||||||||||||||| ||||||||||||||||| || ||||||||| | || Sbjct 1665 AGAAGAAGTAGAAGAGGATGATGATTACTTGTTCGACACGTCAAAGATTTATCAGAGGTT 1724 Query 1275 CATATGGAACTATGAACCTCAGCTTTTGCGTGAAGAT-GCTTCAAAACAGGTCTCTGAAG 1333 || ||||||||| |||||| ||||||||| ||||||| | || |||| ||||||||| Sbjct 1725 CAGATGGAACTACGAACCTGAGCTTTTGCTTGAAGATAG-TTGGGAACAAGTCTCTGAAT 1783 Query 1334 TTATCAATCTTCCGACACAAGTCTTGATAAGTGCCAAGGAGAAAGGAAATGTAGGTCGGT 1393 ||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct 1784 TTATCAATCTTCCAACACAAGTCTTGATAAGTGCTAAGGAAAAAGGGAATGTTGGTCGGT 1843 Query 1394 TCATGAACCACAGCTGTTGGCCCAATGTTTTTTGGCAGCCTATTGAATATGAAAACA-AC 1452 ||||||| ||||| |||| || |||||||| |||||||||||||| |||||||||| | Sbjct 1844 TCATGAATCACAGTTGTTCACCGAATGTTTTCTGGCAGCCTATTGAGTATGAAAACAGA- 1902 Query 1453 GGTGTTACATATGTTCGCATTGGACTTTTTGCAATGAAGCATATTCCTCCAATGACAGAG 1512 |||| | |||| ||| || ||||||||||| ||||||||||||||||| ||||||||| Sbjct 1903 GGTGATGTATATCTTCTTATCGGACTTTTTGCTATGAAGCATATTCCTCCGATGACAGAG 1962 Query 1513 TTAACATATGACTATGGAGTTTCTTGTGTGGAGAAGAATGGAGAAGATGA-G-A-TACTT 1569 ||||||||||||||||||||||| |||||||||| || | ||||||||| | | | ||| Sbjct 1963 TTAACATATGACTATGGAGTTTCATGTGTGGAGAGGAGCGAAGAAGATGAAGTACTTCTT 2022 Query 1570 TATAAAGGCAAGAAGATTTGTCTATGTGGTTCAGTCAAATGTCGTGGCTCTTTT 1623 |||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 2023 TATAAAGGCAAGAAGACCTGTCTCTGTGGTTCAGTCAAATGTCGTGGCTCTTTT 2076 > AT2G24740.1 | Symbols: SDG21, SUVH8 | SET domain group 21 | chr2:10529690-10531957 REVERSE LENGTH=2268 Length=2268 Score = 1129 bits (611), Expect = 0.0 Identities = 889/1015 (88%), Gaps = 51/1015 (5%) Strand=Plus/Plus Query 627 GCATGTGATAGGAAAATCTGGCTTT-AAGGAGT-TCAGATTCAAATTGGTGAGGAAACCA 684 ||| |||| ||||||||| || ||| ||||||| | || |||||| || ||||||||||| Sbjct 1293 GCAAGTGACAGGAAAATCCGG-TTTCAAGGAGTAT-AGGTTCAAACTGCTGAGGAAACCA 1350 Query 685 GACCAACCAT-CTGGTTATGCAATCTGGAAATCAGTTGAAATTTTGAGGAACCATGACTT 743 | |||||| | ||||||||||||||||||||| |||||||| ||||||||| ||||| || Sbjct 1351 GGCCAACC-TCCTGGTTATGCAATCTGGAAATTAGTTGAAAATTTGAGGAATCATGAATT 1409 Query 744 GATTGATCCAAGA-AATGGTTCTATACTTGGAGATCTTTCTTTTGGAGCAGAGGTTTTAC 802 ||||||||||||| || |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct 1410 GATTGATCCAAGACAA-GGTTTTATACTTGGAGATCTTTCTTTTGGAGAAGAGGGTTTAC 1468 Query 803 GAGTTCCGCTCGTTAATGAAGTTGATGAAGATGACAAAACGATTCCTGAAGATTTTGACT 862 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 1469 GAGTTCCGCTCGTTAATGAAGTCGATGAAGAAGACAAAACGATTCCTGACGATTTTGACT 1528 Query 863 ACATTAGATCTCAGTGTTACTCAGGTATGATGTTTGATCTTAATGTTGATATTCAATCAC 922 |||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||| Sbjct 1529 ACATTAGATCTCAGTGTTACTCAGGTATGACGAATGATGTTAATGTTGATAGTCAATCAC 1588 Query 923 TTGGATGCCAGAATTGTGAGTCATGCAGTCATCAAAACTGCTCGTGCATGGGT-AAAAAC 981 | | | | | |||||| || ||||||||||||| | ||||| | |||||| Sbjct 1589 -T---T----G---T-TCAGTCATACATTCATCAAAACTGCACATGCAT-TCTAAAAAAC 1635 Query 982 GGTGG-CGAGCTACCATACCATAACAACATTTTGGTTTCTCGTAAACCATTGATTTACGA 1040 |||| | || ||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1636 TGTGGTC-AGTTACCATACCATGACAACATTTTGGTTTGTCGTAAACCATTGATTTACGA 1694 Query 1041 GTGTGGTGGATCTTGTCCCTGCCCCATCGATTGCCCAAACCGATTGGTTCAAACCGGTTT 1100 ||||||||||||||| | ||| | | |||| ||||| |||||||||| Sbjct 1695 GTGTGGTGGATCTTG----T---CCA---A-----C---CCGAATGGTTGAAACCGGTTT 1736 Query 1101 GAAGCTCCACTTGGAAGTGTTCAAAACAGCAAACTGTGGTTGGGGTTTACGTTCTTGGGA 1160 ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 1737 GAAGCTCCACTTGGAAGTGTTTAAGACATCAAACTGTGGTTGGGGTTTACGTTCTTGGGA 1796 Query 1161 TCCAATCCGAGCGGGAACTTTTATCTGCGAGTTTGCCGGTGTGAGCAAGACAAAAGAAGA 1220 |||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||| Sbjct 1797 TCCAATCCGAGCTGGAACTTTTATCTGCGAGTTTACTGGTGTGAGCAAGACGAAAGAAGA 1856 Query 1221 AGTAGAAGAGGATGACGATTACTTGTTCGACACATCTCGGATTTATCATACCTTCATATG 1280 ||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||| ||| Sbjct 1857 AGTAGAAGAAGATGACGACTACTTGTTCGATACATCTCGGATTTATCATAGCTTCAGATG 1916 Query 1281 GAACTATGAACCTCAGCTTTTGCGTGAAGATGCTT-CAAAACAGGTCTCTGAAGTTA-TC 1338 |||||||||||| |||||||| |||||||||||| | || || |||||||||| | | Sbjct 1917 GAACTATGAACCGGAGCTTTTGTGTGAAGATGCTTGCGAA-CAAGTCTCTGAAGATGCT- 1974 Query 1339 AATCTTCCGACACAAGTCTTGATAAGTGCCAAGGAGAAAGGAAATGTAGGTCGGTTCATG 1398 |||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 1975 AATCTTCCAACGCAAGTCTTGATAAGCGCCAAGGAGAAAGGAAATGTTGGTCGGTTCATG 2034 Query 1399 AACCACAGCTGTTGGCCCAATGTTTTTTGGCAGCCTATTGAATATGA--A-AACAACGGT 1455 ||||||| ||||||||| |||||||| ||||||||||| || ||||| | ||||||||| Sbjct 2035 AACCACAACTGTTGGCCTAATGTTTTCTGGCAGCCTATAGAGTATGATGATAACAACGGT 2094 Query 1456 GTTACATATGTTCGCATTGGACTTTTTGCAATGAAGCATATTCCTCCAATGACAGAGTTA 1515 | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 2095 CACATATATGTTCGCATTGGACTTTTTGCGATGAAGCACATTCCTCCAATGACAGAGTTA 2154 Query 1516 ACATATGACTATGGAGTTTCTTGTGTGGAGAAGAATGGAGAAGATGA-GATACTTTATAA 1574 ||||||||||||||| |||||||||||||||||| ||||||||| || | || ||||||| Sbjct 2155 ACATATGACTATGGAATTTCTTGTGTGGAGAAGACTGGAGAAGACGAAG-TAATTTATAA 2213 Query 1575 AGGCAAGAAGATTTGTCTATGTGGTTCAGTCAAATGTCGTGGCTCTTTTGGCTGA 1629 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2214 AGGAAAGAAGATTTGTCTCTGTGGTTCAGTCAAATGTCGTGGCTCTTTTGGCTGA 2268 Score = 579 bits (313), Expect = 4e-164 Identities = 479/557 (86%), Gaps = 20/557 (4%) Strand=Plus/Plus Query 44 ACAACAACTCTTA-TGATGGGGGTGCTGGTCCTAGTACTGGTCCAAGAAAACGAGGACGT 102 |||||||||| || ||||| | |||||||||||||| |||||| | |||||||| || || Sbjct 590 ACAACAACTC-TACTGATGCGAGTGCTGGTCCTAGTTCTGGTCTAGGAAAACGAAGATGT 648 Query 103 GGCCGACCAAAGGG-TTCAAAAACCGGAACGAGAAAGCCAAAGAAGCCAAAAGCATATGA 161 |||||||||||||| || |||||| || |||||||||||||||||||||||||| |||| Sbjct 649 GGCCGACCAAAGGGTTTAAAAAACAGG-TCGAGAAAGCCAAAGAAGCCAAAAGCAGATGA 707 Query 162 TCCTAATAGCAAACTGATTAAATCTTGTCCAAAATTTGATTCAGGGATAACCAAAGCAGA 221 ||||||||||||| || ||| |||||||| | ||||||||| |||||||| ||||||| Sbjct 708 TCCTAATAGCAAAATGGTTATCTCTTGTCCGGATTTTGATTCAAGGATAACCGAAGCAGA 767 Query 222 GAGAGAAAGCGGAAACCTTGAGATTGTTGCTTCGGTGTTGATGCGGTTTGACGCGATTAG 281 ||||||||||||||||| ||||| |||| |||| | |||||||||||||||||| |||| Sbjct 768 GAGAGAAAGCGGAAACCAGGAGATAGTTGATTCGATTTTGATGCGGTTTGACGCGGTTAG 827 Query 282 ACGGCGATTACACCAAGTAAACCAGCC-AAAAGAC---ATCCTTACAACAGCGTCAACTA 337 |||||| ||| |||| ||||| | || |||||| |||||| ||||||||||||| Sbjct 828 ACGGCGGTTATGCCAACTAAACTA-CCGGAAAGACAAGATCCTT---ACAGCGTCAACTA 883 Query 338 ATTGCATGAGA-TTGGGAGTCCGGACAAATATGACGAGAAGAATTGGTCCAATTCCTGGA 396 ||||||||| | ||||| ||||||||||| |||||||| |||||||| || ||||| ||| Sbjct 884 ATTGCATGA-ATTTGGGGGTCCGGACAAACATGACGAGGAGAATTGGACCCATTCCCGGA 942 Query 397 GTACAAGTAGGCGATATATTCTACTACTGGGGTGAAATGTGCTTAGTCGGTCTTCACAGA 456 ||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||||||| Sbjct 943 GTACAAGTAGGTGATATATTCTATTACTGGTGTGAAATGTGTTTAGTCGGGCTTCACAGA 1002 Query 457 GACATGGCCGCG-GGCATTGATTA-TCTGTCAGCTAAAAG-GAGTGGAGTGGATGGTCAT 513 ||| ||| | | |||||||| || ||| | ||| |||| ||||||||||||||||| | Sbjct 1003 AACACGGCTG-GAGGCATTGA-TAGTCTATTGGCT-AAAGAGAGTGGAGTGGATGGTCCT 1059 Query 514 GCTGCTACGAGTGTGGTAACATCAGGACAGTACGATGATGAAACCGAGGAGCTTGACACT 573 ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| || Sbjct 1060 GCTGCTACGAGTGTGGTAACATCAGGAAAGTACGACAATGAAACCGAGGATCTTGAAACG 1119 Query 574 TTGATCTATATCGGACA 590 |||||||||| |||||| Sbjct 1120 TTGATCTATAGCGGACA 1136 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80471473635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5