BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg344375
Length=903
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26740.1 | Symbols: ATSEH, SEH | soluble epoxide hydrolase |... 1171 0.0
AT2G26750.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1151 0.0
> AT2G26740.1 | Symbols: ATSEH, SEH | soluble epoxide hydrolase
| chr2:11392965-11394279 REVERSE LENGTH=1171
Length=1171
Score = 1171 bits (634), Expect = 0.0
Identities = 751/806 (93%), Gaps = 14/806 (2%)
Strand=Plus/Plus
Query 108 TCCTGACCTACGTGGTTACGGTGATTCCGATGCTCCCGCTGAGATCTCTTCCTACACATG 167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 187 TCCTGACCTACGTGGTTACGGTGACTCCGATGCTCCCGCTGAGATCTCTTCCTACACATG 246
Query 168 CTTCAACATCGTAGGTGACTTAGTCGCCGTCATATCCGCCTTAACCG----AGGATAAGG 223
|||||||||||| ||||||||| |||||||||||||||||||||||| | || | |
Sbjct 247 CTTCAACATCGTTGGTGACTTAATCGCCGTCATATCCGCCTTAACCGCCTCA-GAGGATG 305
Query 224 AGAAGGTGTTTGTGGTTGGACATGACTGGGGAGCTCTCATCGCTTGGTACCTT-TGTCTC 282
||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct 306 AGAAGGTCTTTGTGGTTGGACATGATTGGGGAGCTCTCATCGCTTGGTA-TTTATGTCTC 364
Query 283 TTCCGACCAGATAAG-GTTAAAGCTTTGATCAACCTTAGTGTCCCG-T-TC-TTACGTCC 338
|||||||||||| || || |||||| || ||||||| ||||| ||| | || || || ||
Sbjct 365 TTCCGACCAGAT-AGAGTCAAAGCTCTGGTCAACCTCAGTGTTCCGTTCTCTTTCCGGCC 423
Query 339 AACCGATCCATCCACGAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTACTA 398
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424 AACCGATCCATCGGTGAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTACTA 483
Query 399 TGTCTGCAGGTTTCAGGAAGTTGGAGTTATAGAAGCTGAGATTGCAGAGGTTGGAACAGA 458
| ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 484 TATCTGCAGGTTTCAGGAATTTGGAGATGTAGAAGCTGAGATTGCAGAGGTTGGAACAGA 543
Query 459 GAGAGTCATGAAGAGACTACTCACTTATAGAACTCATGGACCGGTTATTATACCGAAGGA 518
||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||
Sbjct 544 GAGAGTCATGAAGAGACTACTCACTTATAGAACTCCTGGACCGGTAATTATCCCGAAGGA 603
Query 519 CAAAAGCTTTTGGGGATCCAAAGGCGAAACTATACCTCTACC-TACTTGGCTAACTGAGG 577
|||||| ||||||||||||||||||||||||||||| || || | |||||||||| ||||
Sbjct 604 CAAAAGTTTTTGGGGATCCAAAGGCGAAACTATACCACTCCCGT-CTTGGCTAACGGAGG 662
Query 578 AAGATGTTGCTTACTTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAATT 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 AAGATGTTGCTTACTTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAATT 722
Query 638 ACTACCGTAACTTTAACCGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAATCC 697
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 ACTACCGTAACTTCAACAGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAATCC 782
Query 698 AGGTTCCTACAAAGTTTGTGATAGGGGAGCTTGATTTGGTCTACGCTATGCCTGGTGTCA 757
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 783 AGGTTCCTACAAAGTTTGTGATAGGGGAGCTTGATCTGGTCTACTATATGCCTGGTGTGA 842
Query 758 AAGAATATATACATGGTCCCAAGTTTAAGGAAGATGTGCCTTTTCTTGAAGAGCCTGTGG 817
| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 843 AGGAATATATACATGGTCCCCAGTTTAAGGAAGATGTGCCTTTGCTTGAAGAGCCTGTGG 902
Query 818 TCATGGAAGGAGTGGCTCACTTCATTAACCAAGAGAAGCCTCAAGAGATTCTCCAAATTA 877
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 903 TCATGGAAGGAGTGGCTCACTTCATTAACCAAGAAAAGCCTCAGGAGATTCTCCAAATTA 962
Query 878 TCCTTGATTTCATCTCCAAATTCTAA 903
||||||||||||||||||||||||||
Sbjct 963 TCCTTGATTTCATCTCCAAATTCTAA 988
Score = 148 bits (80), Expect = 7e-35
Identities = 100/109 (92%), Gaps = 4/109 (4%)
Strand=Plus/Plus
Query 1 ATGGAGCACATG-AAGGTAAGAGGGAACGGCATAGATATCCACGTAGCAATCCAAGGTCC 59
||||| |||| | ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 23 ATGGAACACA-GAAAGGTAAGAGGGAACGGCATAGACATTCACGTAGCAATCCAAGGTCC 81
Query 60 CTCCGATGGTCCGATAGTCCTTCTCCTCCATGGCTTTCC-TGAGCTTTG 107
|||||||||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct 82 CTCCGATGGTCCTATAGTCCTCCTCCTCCATGG-TTTCCCTGAGCTTTG 129
> AT2G26750.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:11395896-11397092 REVERSE LENGTH=1045
Length=1045
Score = 1151 bits (623), Expect = 0.0
Identities = 743/801 (93%), Gaps = 7/801 (1%)
Strand=Plus/Plus
Query 108 TCCTGACCTACGTGGTTACGGTGATTCCGATGCTCCCGCTGAGATCTCTTCCTACACATG 167
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||
Sbjct 172 TCCTGACCTACGTGGTTACGGTGACTCCGATGCTCCGGCTGAGATTTCTTCCTTTACATG 231
Query 168 CTTCAACATCGTAGGTGACTTAGTCGCCGTCATATCCGCCTTAACCGAGGATAAGGAGAA 227
||| ||||| ||||||||||||||||||||||||||| |||||| | |||| | ||||
Sbjct 232 CTTTAACATAGTAGGTGACTTAGTCGCCGTCATATCCACCTTAATCAAGGAGGATAAGAA 291
Query 228 GGTGTTTGTGGTTGGACATGACTGGGGAGCTCTCATCGCTTGGTACCTTTGTCTCTTCCG 287
||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 292 GGTGTTTGTGGTTGGACATGATTGGGGAGCTCTCATCGCTTGGTACCTTTGTCTTTTTAG 351
Query 288 ACCAGATAAGGTTAAAGCTTTGATCAACCTTAGTGTCCCG-T-TCTTAC-GTCCAACCGA 344
||||||||| || ||||||||| | ||||||||||| ||| | |||| | | ||||||||
Sbjct 352 ACCAGATAAAGTCAAAGCTTTGGTTAACCTTAGTGTTCCGTTGTCTTTCTGGCCAACCGA 411
Query 345 TCCATCCACGAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTACTATGTCTG 404
|||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||
Sbjct 412 TCCATCGGTGAAGCCCGTTGATCGCATGCGTGCTGTATACGGCAATGATTACTATGTCTG 471
Query 405 CAGGTTTCAGGAAGTTGGAGTTATAGAAGCTGAGATTGCAGAGGTTGGAACAGAGAGAGT 464
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 472 CAGGTTTCAGGAAGTTGGAGATATAGAAGCTGAGATTGCAGAGGTTGGAACAGAGAGAGT 531
Query 465 CATGAAGAGACTACTCACTTATAGAACTCATGGACCGGTTATTATACCGAAGGACAAAAG 524
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 532 CATGAAGAGACTACTCACTTATAGAACTCCTGGACCGCTTATTATACCGAAGGACAAAAG 591
Query 525 CTTTTGGGGATCCAAAGGCGAAACTATACCTCTACC-TACTTGGCTAACTGAGGAAGATG 583
||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||
Sbjct 592 TTTTTGGGGATCCAAAGGCGAAACTATACCACTACCGT-CTTGGCTAACGGAGGAAGATG 650
Query 584 TTGCTTACTTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAATTACTACC 643
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 651 TTGCTTACTTCGTCAGCAAGTTTAAAGAGAAAGGCTTCTGTGGTCCAGTCAATTACTACC 710
Query 644 GTAACTTTAACCGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAATCCAGGTTC 703
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 GTAACTTCAACAGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAATCCAGGTTC 770
Query 704 CTACAAAGTTTGTGATAGGGGAGCTTGATTTGGTCTACGCTATGCCTGGTGTCAAAGAAT 763
||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||||
Sbjct 771 CTACAAAGTTTGTGATAGGGGAGCTTGATCTGGTCTACTATATGCCTGGTGTGAAGGAAT 830
Query 764 ATATACATGGTCCCAAGTTTAAGGAAGATGTGCCTTTTCTTGAAGAGCCTGTGGTCATGG 823
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 831 ATATACATGGTCCCCAGTTTAAGGAAGATGTGCCTTTGATTGAAGAGCCTGTGGTCATGG 890
Query 824 AAGGAGTGGCTCACTT-CATTAACCAAGAGAAGCCTCAAGAGATTCTCCAAATTATCCTT 882
|||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||
Sbjct 891 AAGGAGTGGCTCACTTTC-TTAACCAAGAGAAGCCTCAAGAGATTCTCCAAATAATCCTT 949
Query 883 GATTTCATCTCCAAATTCTAA 903
||||||||||||| |||||||
Sbjct 950 GATTTCATCTCCACATTCTAA 970
Score = 148 bits (80), Expect = 7e-35
Identities = 100/109 (92%), Gaps = 4/109 (4%)
Strand=Plus/Plus
Query 1 ATGGAGCACATG-AAGGTAAGAGGGAACGGCATAGATATCCACGTAGCAATCCAAGGTCC 59
|||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 8 ATGGAGCACA-GAAATGTAAGAGGGAACGGCATAGACATCCACGTAGCAATCCAAGGTCC 66
Query 60 CTCCGATGGTCCGATAGTCCTTCTCCTCCATGGCTTTCC-TGAGCTTTG 107
|||||||||| | |||||||| ||||||||||| ||||| |||||||||
Sbjct 67 CTCCGATGGTACTATAGTCCTCCTCCTCCATGG-TTTCCCTGAGCTTTG 114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44105581066
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5