BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg344858
Length=5562
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49340.2 | Symbols: ATPI4K ALPHA | Phosphatidylinositol 3- a... 2867 0.0
AT1G51040.1 | Symbols: | Protein kinase superfamily protein | ... 826 0.0
> AT1G49340.2 | Symbols: ATPI4K ALPHA | Phosphatidylinositol 3-
and 4-kinase family protein | chr1:18252355-18264462 FORWARD
LENGTH=6582
Length=6582
Score = 2867 bits (1552), Expect = 0.0
Identities = 2333/2711 (86%), Gaps = 49/2711 (2%)
Strand=Plus/Plus
Query 2869 CTTCAACAATTTGTTAATACTGCTGAGAAA-GGAGGAGAGGTGGACAAATTGCAATTTCG 2927
||||| |||||||| ||||||||||| ||| || ||||||||||| || | |||||| ||
Sbjct 3409 CTTCAGCAATTTGTAAATACTGCTGA-AAAGGGTGGAGAGGTGGAGAAGTCGCAATTCCG 3467
Query 2928 AGAAACTTGTTCTCATGCAACTTCATTACTTTTGTCAAATCTGCAGGCTGGTGAGCCCAA 2987
|||||||||||| || |||||| |||||||| ||||||| ||| || ||||||| | ||
Sbjct 3468 AGAAACTTGTTCCCAAGCAACTGCATTACTTCTGTCAAACCTG--GG-TGGTGAGTCGAA 3524
Query 2988 AACAGATATCAAGGCCGGCTTTTCTCGTTTACTGCGTCTCCTTTGTTGGTGCCCAGCTTA 3047
|||| || || | |||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 3525 AACAAATGTC---GAAGGCTTTTCTCAATTACTGCGTCTCCTTTGTTGGTGTCCAGCATA 3581
Query 3048 TATAT-TAACTTCAGATGCTATGGAAACTGGAGTATTCATTTGGACCTGGTTGGTTTCCG 3106
||||| | ||| |||| ||||||||||||||| | || || ||||||||||||||||| |
Sbjct 3582 TATATCT-ACTCCAGACGCTATGGAAACTGGAATTTTTATATGGACCTGGTTGGTTTCTG 3640
Query 3107 CAGCTCCACAACTGGGATCTATTGTCCTTTCCGAACTTGTCGATGCATGGACATGGACAA 3166
| ||||| ||||||| |||| |||||||| |||| ||||| |||||||||| ||||||||
Sbjct 3641 CTGCTCCTCAACTGGTATCTCTTGTCCTTGCCGAGCTTGTTGATGCATGGATATGGACAA 3700
Query 3167 TTGACT-CAAAACGAGGACTGTTTGCATCTGATGTGCGATACTATGGCCCAGCTGCAAAA 3225
|||| | ||||||| || || |||||||||||||| ||||||| ||||||||||||||||
Sbjct 3701 TTGA-TACAAAACGTGGTCTCTTTGCATCTGATGTACGATACTCTGGCCCAGCTGCAAAA 3759
Query 3226 TTAAGGCCCCAGATTTCCCCTGGAGAACCAGAAGGTCCACCTGATAGTGACCCTGTTGAT 3285
||||| ||||| ||||||| || |||||||||| ||||||||| ||||||||||||||
Sbjct 3760 TTAAGACCCCATCTTTCCCCAGGGGAACCAGAAGATCCACCTGAAAGTGACCCTGTTGAC 3819
Query 3286 CAAATAGTCGCTCACAGACTATGGCTTGGATTTTTGATAGATCGCTTTGAGGTTGTTCGA 3345
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 3820 CAGATAGTTGCTCACAGACTGTGGCTTGGATTTTTGATAGATCGTTTTGAGGTTGTTCGA 3879
Query 3346 CATAATAGCGTGGAGCAACTCTTGCTGTTTGGTCGGTTGTTTCAACGGAGTACAAATCTT 3405
|||||||| | ||||||||| |||||| | |||||| |||| |||||||||||| | |||
Sbjct 3880 CATAATAGTGCGGAGCAACTGTTGCTGCTAGGTCGGATGTTACAACGGAGTACAGACCTT 3939
Query 3406 GACTGGTGCTTTACCCACCACCCGGCAGCAGCTGGTACttttttttCCTTGATGCTCCTT 3465
|| ||||||||||| | |||||| ||||| |||||||| |||||||| ||||||||||||
Sbjct 3940 GAATGGTGCTTTACTCGCCACCCTGCAGCTGCTGGTACCTTTTTTTCTTTGATGCTCCTT 3999
Query 3466 GGACTGAAGTTCTGCTCATGCCAAAGAAAAGGCAGTATGCATAAATTTAGA-CGTGGACT 3524
|||||||| |||||||||||||||| | |||||| ||||| |||||| || | ||||||
Sbjct 4000 GGACTGAAATTCTGCTCATGCCAAACACAAGGCAACATGCAGAAATTTCGATC-TGGACT 4058
Query 3525 TGAACTGTTGGAAGATCGAATCTACAGGACTTCTTTAGGCTGGTTTTCTCGTCAGCCAGA 3584
| || || |||||||||||||| ||||| ||||||||||||||| ||| |||||||||
Sbjct 4059 CCAGCTTTTAGAAGATCGAATCTATAGGACGTCTTTAGGCTGGTTTGCTCATCAGCCAGA 4118
Query 3585 GTGGTACGATGTAGGCATTCCGAATTTTTGTCAGAGTGAGGCTCAATCTGTTTCAATTTT 3644
|||||| |||||| ||||| ||||||||||| || ||||||| |||||||||| ||||
Sbjct 4119 GTGGTATGATGTAAATATTCCAAATTTTTGTCATAGCGAGGCTCTATCTGTTTCAGTTTT 4178
Query 3645 TGCTCAGTTTTTGTTAAACGAGCGATCAGATTTTAGCCAATTTGATTCCAAAGGAAGAGC 3704
|| ||| ||||| | |||||||| |||||| | || |||| |||||||||||||| | |
Sbjct 4179 TGTTCACTTTTTATCAAACGAGCTATCAGAATCAAGTCAATCTGATTCCAAAGGAAAACC 4238
Query 3705 TCATGAAAACGGGCAATTAACTGAATTGATGGatcatcatcatca-tcatcatcCTGTCT 3763
|| ||||| ||| |||| || |||||| | | | | | |||| | ||||||| ||||
Sbjct 4239 TCGTGAAAGTGGG-AATT---TG-ATTGAT-G-TGA-C-TGATCAGT-ATCATCCCGTCT 4288
Query 3764 GGGGTAAAATGGACAGCTATGCAGTGGGAAAGGAGAAGAGGAAGCAACTGCTTCTGATTC 3823
||||| | ||||||| ||| | ||||||| || || |||||||| ||||| | || |
Sbjct 4289 GGGGTGAGATGGACAACTACACTCTGGGAAAAGAAAAAAGGAAGCAGTTGCTTTTAATGC 4348
Query 3824 TTTGCCAACATGAATCTGATAGGCTTGATGTTTGGGCACAACCTATTAGTTCAAAGAACA 3883
| ||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| |||
Sbjct 4349 TCTGCCAGCATGAAGCTGACAGGCTTGACGTTTGGGCACAACCTATTAGTTCAAAGGACA 4408
Query 3884 GTCCATATTCACGGCTAAAAATAAGCTCTGGGAAATGGACTGAACATGCTAAAACTGCCT 3943
|||| ||||| ||||| ||||||||||||| ||||||||| ||| |||||||||| ||||
Sbjct 4409 GTCCGTATTCGCGGCTGAAAATAAGCTCTGAGAAATGGACCGAATATGCTAAAACGGCCT 4468
Query 3944 TTTCAGTGGATCCAAGGATTGCTCTATCA-TTAGCTTCAAGATTTCCAGCAAAT-ATTGC 4001
||||||||||||| | |||||| ||||| || || ||||||||||| |||||| || |
Sbjct 4469 TTTCAGTGGATCCTCGCATTGCTTTATCAGTT-GCCTCAAGATTTCCGGCAAATGCTT-C 4526
Query 4002 TGTGAAATCCCAAGTCACTCAGCTAGTTCAGGCTCATATAGTAGATCTTCGTACAATTCC 4061
||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||
Sbjct 4527 TGTGAAATCTGAAGTCACTCAGCTGGTTCAGACAAATATAGTAGATCTTCGTACAATTCC 4586
Query 4062 TGAGGCGTTGCCATATTTTGTCACACCTAAAAGCGTTGAAGAGAACTCAGTGCTGTTGCG 4121
|||||| ||||| |||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct 4587 TGAGGCATTGCCGTATTTTGTTACACCGAAAAATGTTGAAGAGAACTCAGTGCTGTTGC- 4645
Query 4122 A-CAGCTGCCTCATTGGGCTGCTTGTTCAATTACACAGGCTCTTGAGTTCCTCACTCCTA 4180
| ||||| || || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 4646 AGCAGCTACCGCACTGGGCTGCTTGTTCAATTACACAGGCTCTTGAGTTCCTCACGCCTG 4705
Query 4181 CTTATAAGGGACATCCTCGTGTCATGGCATATGTCCTGCGAGTTTTAGAGTCCTACCCCC 4240
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct 4706 CTTATAAGGGACATCCACGTGTCATGGCATATGTCCTACGAGTTTTAGAGTCCTACCCTC 4765
Query 4241 CTGAGCGAGTCACTTTCTTCATGCCACAGTTAGTGCAGTCTCTGCGCTATGATGAAGGGA 4300
|||| ||||| ||||| |||||||| ||||| ||||||||| ||||||||||||| ||||
Sbjct 4766 CTGAACGAGTTACTTTTTTCATGCCGCAGTTGGTGCAGTCTTTGCGCTATGATGATGGGA 4825
Query 4301 GGCTGGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACATATTTGCTCATATCC 4360
|||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 4826 GGCTAGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACATATTTGCCCACATTC 4885
Query 4361 TCACGTGGCATTTGCAGGGTGAGTCTGTTCAGGAAACTGTGAAAGATGGTGCTTTCGATA 4420
||| ||||||||||| |||||| ||| ||||||||| ||| |||||| || ||||||
Sbjct 4886 TCATTTGGCATTTGCAAGGTGAGGATGTGCAGGAAACTCCGAAGGATGGTTCTATCGATA 4945
Query 4421 AGAATACATCATTCCAAGCAATCTTGTCAGAGGTTCGACAGCATATCATTGATGGTTTTA 4480
||||| | ||||||||| ||| ||| || ||||||| |||||||||||||||||||| |
Sbjct 4946 AGAATGCGGCATTCCAAGAAATTTTGCCACAGGTTCGGCAGCATATCATTGATGGTTTCA 5005
Query 4481 GTCCAAAGGCCTTGGACATGTTCAAAAGAGAGTTTGACTTCTTTGAAAAGGTTACATCTA 4540
| || || |||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct 5006 GCCCCAACGCCTTGGACATGTTCACTAGAGAGTTTGACTTCTTTGACAAGGTTACTTCTA 5065
Query 4541 TTTCTGGGGCATTGTTTCCTCTTCCAAAGGAAGAACGAAGAGCTGGTATCAGGAGGGAGT 4600
| ||||||| || || |||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 5066 TATCTGGGGTGTTATTCCCTCTTCCAAAGGAAGAACGCAGAGCCGGTATTAGGAGGGAGT 5125
Query 4601 TGGAGAAAATCAAAATGCAAGGAGAAGACCTTTATTTGCCTACGGCTCCTAACAAGCTTG 4660
|||||||||| ||||||| ||||| |||||||||||||| || ||||||||||||||||
Sbjct 5126 TGGAGAAAATTGAAATGCAGGGAGATGACCTTTATTTGCCAACTGCTCCTAACAAGCTTG 5185
Query 4661 TTAAGGGTATCCAG-ATAGACAGTGGCATAACCCTT-CAATCAGCTGCCAAAGTCCCTAT 4718
||| |||||||| | |||||||||| || |||||| |||||||||||||||||||||||
Sbjct 5186 TTAGGGGTATCC-GTGTAGACAGTGGAAT-ACCCTTACAATCAGCTGCCAAAGTCCCTAT 5243
Query 4719 CATGATAACCTTTAACGTTGTTGATCGTGATGGTAACCAGAATGATGCGAAACCACAGGC 4778
||||||||| ||||||||| |||||||||||||| |||| | ||||| |||||||||||
Sbjct 5244 CATGATAACTTTTAACGTTATTGATCGTGATGGTGACCACAGTGATGTAAAACCACAGGC 5303
Query 4779 TTGTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGCCCTTCAAGTGATATC 4838
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 5304 TTGCATTTTCAAGGTTGGAGATGATTGCCGGCAAGATGTTCTTGCCCTTCAAGTGATATC 5363
Query 4839 TCTTCTTAGAGACATATTTCAAGCGGTTGGTCTTAATCTTTATCTTTTTCCTTATGGAGT 4898
|||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||
Sbjct 5364 TCTTCTTAGAGACATATTTCAAGCAGCTGGTCTTAACCTTTATCTTTTTCCATATGGAGT 5423
Query 4899 ACTTCCAACTGGGGCAGGGAGGGGG-ATAATCGAGGTAGTGCCAAATACACGAAGCAGAA 4957
||| |||||||| || || | |||| ||||| ||||| ||||| |||||| |||||||||
Sbjct 5424 ACTCCCAACTGGTGC-GGAAAGGGGCATAATTGAGGTGGTGCCTAATACAAGAAGCAGAA 5482
Query 4958 GTCAAATGGGTGA-ATCAACCGATGGTGGCTTGTATGAGATCTTTCAAGAGGAGTTTGGA 5016
||||||||||||| | | || || || || ||||||||||| |||||| | || | ||||
Sbjct 5483 GTCAAATGGGTGAGA-CTACTGACGGGGGTTTGTATGAGATTTTTCAACAAGACTATGGA 5541
Query 5017 CCCGTTGGCTCACCCTCCTTTGAAACGGCAAGGG-GTAACTTCCTCACCAGCAGTGCTGG 5075
||||| |||||| || |||||||||| ||| ||| | |||||||||| ||| ||||| ||
Sbjct 5542 CCCGTCGGCTCAACCACCTTTGAAACAGCACGGGAG-AACTTCCTCATCAGTAGTGCCGG 5600
Query 5076 TTACGCGGTGGCGAGTCTTTTACTCCAGTCCAAAGACAGACACAACGGCAATCTCCTCTA 5135
||| || ||||| ||||||||||||||| |||||||||||||||| || ||||||||||
Sbjct 5601 TTATGCAGTGGCTAGTCTTTTACTCCAGCCCAAAGACAGACACAATGGAAATCTCCTCTT 5660
Query 5136 CGACAACATGGGAAGGCTTGTTCACATTGATTTTGGTTTCATTTTTGAAACCTCCCCTGG 5195
||| || ||||||| ||||| ||||| || |||||||||||||| ||||| || |||||
Sbjct 5661 CGATGACGTGGGAAGACTTGTCCACATCGACTTTGGTTTCATTTTGGAAACTTCGCCTGG 5720
Query 5196 TGGAAACATGCGTTTTGAGAGCGCACATTTCAAACTGAGCCACGAAATGACACAGTTGCT 5255
||| |||||||| || ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct 5721 TGGGAACATGCGATTCGAGAGTGCTCATTTCAAACTGAGCCACGAAATGACTCAGTTGCT 5780
Query 5256 TGATCCATCAGGGAAT-ATGAAGAGCGAATCTTGGCATCAGTTTGTGAGCTTGTGCGTGA 5314
||||| || ||| | ||||| ||| || | |||||||||||||||||||||||||| |
Sbjct 5781 AGATCCCTC-GGGTGTTATGAAAAGCAAAACATGGCATCAGTTTGTGAGCTTGTGCGTCA 5839
Query 5315 AGGGTTACTTGGCTGCTCGCCGGTACATGGAGGGGATCATCAGTACAGTGGAAATGATGG 5374
|||| ||||| |||||||| ||| | ||||| || |||||||| || ||| ||||||||
Sbjct 5840 AGGGGTACTTAGCTGCTCGGCGGCAGATGGATGGAATCATCAGCACGGTGCAAATGATGC 5899
Query 5375 TGGAAAGTGGATTGCCTTGCTTCAGCAGAGGAGATCCAATTGAGAAA-CTTCGCAAGAGA 5433
| |||||||| ||||||||||| ||||||||||||||||||| | || ||| | || |||
Sbjct 5900 TAGAAAGTGGGTTGCCTTGCTTTAGCAGAGGAGATCCAATTG-GTAATCTTAGGAAAAGA 5958
Query 5434 TTTCATCCC-GAGATGAGTGAGCGTGAAGCCGCACACTTCATGATCCATGTCTGTACCGA 5492
||||| ||| || ||||| || |||||||| |||||||||||||| ||||| ||||| ||
Sbjct 5959 TTTCA-CCCAGAAATGAGCGAACGTGAAGCTGCACACTTCATGATTCATGTATGTACGGA 6017
Query 5493 TGCCTACAACAAATGGACCAC-GTATGGGTACGACTTGATACAGTATCTGCAACAAGGCA 5551
|| || ||||| ||||| || | ||| ||||||||||| |||||| ||||||||||||
Sbjct 6018 CGCATATAACAAGTGGACTACTGC-TGGATACGACTTGATTCAGTATTTGCAACAAGGCA 6076
Query 5552 TCGAGAAATAA 5562
||||||| |||
Sbjct 6077 TCGAGAAGTAA 6087
Score = 1134 bits (614), Expect = 0.0
Identities = 950/1109 (86%), Gaps = 35/1109 (3%)
Strand=Plus/Plus
Query 1748 CTGTAGGAGGGCCTTACATGTGGAACACTCAGTGGTCTCTTGCTGTTCAGAGGATTTCTC 1807
|||| || || |||||||||||| ||| ||||||| |||| ||||||||| | ||| |||
Sbjct 2177 CTGTGGGCGGTCCTTACATGTGGGACAATCAGTGGGCTCTAGCTGTTCAGCGAATTGCTC 2236
Query 1808 AAGGCACTCCTCCCCTTGTCGTCAGTTCTGTAAAATGGCTTGAAGACGAACTAGAGCTCA 1867
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 2237 AAGGCACTCCTCCCCTTGTCGTCAGTTCTGTAAAATGGCTTGAAGACGAATTAGAACTCA 2296
Query 1868 ATGCGCTTCATAATTCTGATAGTTC-CCGAGGAACTGGCAATAAGATAGTAGCTTCAACC 1926
| || ||||| ||| ||| ||| | |||||||| ||| ||| ||| |||||||||||||
Sbjct 2297 ACGCACTTCACAATCCTGGTAGC-CGCCGAGGAAATGGAAATGAGAAAGTAGCTTCAACC 2355
Query 1927 CAAAGAAATGCTCTTTCAATTGCCTTGGGTGGTCA-AGTTGACGTTTCAACAATGAACAC 1985
|| ||| ||||||||||| |||||| ||||| || |||||||||| || ||||||||||
Sbjct 2356 CAGAGACTTGCTCTTTCAACTGCCTTAGGTGG-CAGAGTTGACGTTGCAGCAATGAACAC 2414
Query 1986 TATCTCAGGGGTGAACGCTACCTATCTACTTGCAGTAGCCCTTTTGGAGATCATACGTTT 2045
||||||||||||||| ||||||||| | ||||| || || |||||||||||||||||||
Sbjct 2415 TATCTCAGGGGTGAAGGCTACCTATTTGCTTGCTGTGGCTTTTTTGGAGATCATACGTTT 2474
Query 2046 TACTAGCAATGGGGGTATCCTTAATGGAGGCTTAAGTGTGTCTGACTCTCGAAGTGCCTT 2105
|| |||||| ||||||||||||||||| | | ||| || |||| |||| ||||||||||
Sbjct 2475 TATTAGCAACGGGGGTATCCTTAATGGTGAATCAAGCGTTTCTGCCTCTAGAAGTGCCTT 2534
Query 2106 CAGTTGCGTCTTTGAATACCTCAAACCTCCAAATCTCT-CTCCTGCTGTTTCCCAGTGTT 2164
|||||| || || ||||| || ||| |||||||||| | |||||||||||||||||||||
Sbjct 2535 CAGTTGTGTGTTCGAATATCTGAAAACTCCAAATCT-TACTCCTGCTGTTTCCCAGTGTT 2593
Query 2165 TGACAGCAATTGTGCATAGAGCCTTTGAAGCAGCAGTGTCATGGCTGGAAGATCGGATAT 2224
|||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||
Sbjct 2594 TGACGGCAATTGTGCATAGAGCCTTTGAAACAGCAGTCTCATGGCTGGAAGATCGAATAT 2653
Query 2225 CTCTCACTGGGAAAGATGCTAGTATTA-AGGAA-TCGACTATGTACGCACATGCATGCTT 2282
|||| ||||||||||||||| ||| || || || | ||| | ||| ||||||||||| ||
Sbjct 2654 CTCTTACTGGGAAAGATGCTCGTAATAGAG-AACT-GACAACGTATGCACATGCATGTTT 2711
Query 2283 CCTCATAAAGAATATGTCACAGAGAGATGAACACATACGACATATCTCAGTGAACCTGTT 2342
||||||||||| |||||||||||||||||| ||| | ||| ||||||| |||||||||||
Sbjct 2712 CCTCATAAAGAGTATGTCACAGAGAGATGAGCACGTCCGAGATATCTCTGTGAACCTGTT 2771
Query 2343 GATTCAGATCAGG-GACAAGTTTCCCCAGGTCCTCTGG-AGCTCCTCTTGTCTGGATAGT 2400
|| |||| | | | ||||| ||||| |||||||||||| | || || ||||||||||||
Sbjct 2772 GACTCAGCT-ACGAGACAAATTTCCTCAGGTCCTCTGGCAT-TCGTCATGTCTGGATAGT 2829
Query 2401 TTGCTATTCTCTGTTCCCCACAATACACCTTCAG-TGGCTG-CGAACGATCCTGCTTGGA 2458
||||| || || |||| |||||||||||||| || || | || |||||||||||||
Sbjct 2830 TTGCTGTTTTCAGTTCATGACAATACACCTTCAACTGT-TGTC-AATGATCCTGCTTGGA 2887
Query 2459 CTGCTGCCGTTAGATCTTTATACCAGAAAGTTGTTCGAGAATGGATCATAATATCACTTT 2518
||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 2888 CTGCTGCTGTTCGATCCTTATACCAGAAAGTTGTACGAGAATGGATCATAATATCGCTTT 2947
Query 2519 CATATGCTCCATGCACTAGTCAGGGTTTGCTTCAGGATAAACTGTGTAAGGCAAACACAC 2578
|||||||||||||||| ||||||||| ||||||||||||| ||||| || |||||||||
Sbjct 2948 CATATGCTCCATGCACCAGTCAGGGTCTGCTTCAGGATAAGCTGTGCAAAGCAAACACA- 3006
Query 2579 TG-CAGCGAACACAGACTACAACTGATGTGGTTTCTCTTCTAACTGAGATAAAGGTTGGA 2637
|| |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 3007 TGGCAGCGAGCACAAACTACAACTGATGTGGTTTCTCTTCTATCTGAGATAAAAATTGGA 3066
Query 2638 ACTG-AAA---T----TT-GGTCTGGAATAAAAACAGCAAATATTCCAGCTGTGATGGCT 2688
|||| ||| | || ||||||| |||| ||| || ||||| |||||||||||||||
Sbjct 3067 ACTGGAAAAAATGAACTTTGGTCTGGGATAAGAACTGCTAATATCCCAGCTGTGATGGCT 3126
Query 2689 GCAGCAGTTTCAGCGTCTGGGGCAAAATTAAAAGCTTCTGAAGCCTTTAACTTGGACA-T 2747
||||||| | ||||||| |||||||| ||||||| ||||||||||||||||||||| | |
Sbjct 3127 GCAGCAGCTGCAGCGTCAGGGGCAAACTTAAAAGTTTCTGAAGCCTTTAACTTGGA-AGT 3185
Query 2748 ACTTGGTACTAGTGTAGTTAATGCAATGTTAAAGTGCAACCATA-TCGGACACATTGCTG 2806
|||||||||| ||||||| | ||||| | |||||||||||||| | ||| | |||||||
Sbjct 3186 ACTTGGTACTGGTGTAGTCAGTGCAACGGTAAAGTGCAACCATGCT-GGAGAAATTGCTG 3244
Query 2807 GCTTG-GTAAGATTGGATAACAGTTTTGG 2834
|| || | ||| ||| | |||||| ||||
Sbjct 3245 GCATGCG-AAGGTTGTACAACAGTATTGG 3272
> AT1G51040.1 | Symbols: | Protein kinase superfamily protein
| chr1:18920658-18923314 FORWARD LENGTH=1578
Length=1578
Score = 826 bits (447), Expect = 0.0
Identities = 556/609 (91%), Gaps = 6/609 (1%)
Strand=Plus/Plus
Query 4304 TGGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACATATTTGCTCATATCCTCA 4363
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 344 TGGTTGAAGGGTATCTTCTTAGAGCTGCCCAAAGAAGTGACATATTTGCTCATACCCTCA 403
Query 4364 CGTGGCATTTGCAGGGTGAGTCTGTTCAGGAAACT-GTGAAAGATGGTGCTTTCGATAAG 4422
|||||||| ||||||||||||||| |||||| | ||||||||||||||||||||||||
Sbjct 404 TTTGGCATTTACAGGGTGAGTCTGTTGAGGAAA-TAGTGAAAGATGGTGCTTTCGATAAG 462
Query 4423 AATACATCATTCCAAGCAATCTTGTCAGAGGTTCGACAGCATATCATTGATGGTTTTAGT 4482
||| |||||||||||| |||||||||||| ||||| ||||||||| |||||||||| | |
Sbjct 463 AATGCATCATTCCAAGAAATCTTGTCAGACGTTCGGCAGCATATCGTTGATGGTTTCACT 522
Query 4483 CCAAAGGCCTTGGACATGTTCAAAAGAGAGTTTGACTTCTTTGAAAAGGTTACATCTATT 4542
|| ||||||||| | | |||| |||||||||||||||||||||||||| |||||||||
Sbjct 523 CCCAAGGCCTTGAATTTTTTCAGTAGAGAGTTTGACTTCTTTGAAAAGGTCACATCTATT 582
Query 4543 TCTGGGGCATTGTTTCCTCTTCCAAAGGAAGAACGAAG-AGCTGGTATCAGGAGGGAGTT 4601
||||||||||| |||||||||||||||||||||| || ||||||||| |||||||| ||
Sbjct 583 TCTGGGGCATTACTTCCTCTTCCAAAGGAAGAACG-AGTAGCTGGTATTAGGAGGGAATT 641
Query 4602 GGAGAAAATCAAAATGCAAGGAGAAGACCTTTATTTGCCTACGGCTCCTAACAAGCTTGT 4661
||||||||||||||||||||||||||| |||||| |||| || |||||||||||||| |
Sbjct 642 GGAGAAAATCAAAATGCAAGGAGAAGATCTTTATCTGCCGACTGCTCCTAACAAGCTCG- 700
Query 4662 TAAGGG-TATCCAGATAGACAGTGGCATAACCCTTCAATCAGCTGCCAAAGTCCCTATCA 4720
| |||| ||| ||| |||||||||| ||| |||| |||||||||||||||||||||||||
Sbjct 701 TCAGGGTTATTCAGGTAGACAGTGGAATACCCCTACAATCAGCTGCCAAAGTCCCTATCA 760
Query 4721 TGATAACCTTTAACGTTGTTGATCGTGATGGTAACCAGAATGATGCGAAACCACAGGCTT 4780
|||||||||||||||||||||||| ||||||| |||| ||||||| |||||| || ||||
Sbjct 761 TGATAACCTTTAACGTTGTTGATCTTGATGGTGACCACAATGATGTGAAACCTCAAGCTT 820
Query 4781 GTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGCCCTTCAAGTGATATCTC 4840
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 821 GTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGCCCTGCAAGTGATATCTC 880
Query 4841 TTCTTAGAGACATATTTCAAGCGGTTGGTCTTAATCTTTATCTTTTTCCTTATGGAGTAC 4900
||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct 881 TTCTTGGAGACATATTTCAAGCTGTTGGTCTTAATCTCTATCTTTTTCCATATGGAGTAC 940
Query 4901 TTCCAACTG 4909
|||||||||
Sbjct 941 TTCCAACTG 949
Score = 593 bits (321), Expect = 5e-168
Identities = 530/632 (84%), Gaps = 10/632 (2%)
Strand=Plus/Plus
Query 4936 GTGCCAAATACACGAAGCAGAAGTCAAATGGGTGAATCAACCGATGGTGGCTTGTATGAG 4995
|||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||
Sbjct 952 GTGCCAAATACACGAAGCAGAAGTCAAATGGGTGAAACAACCGACGGGGGTTTGTATGAG 1011
Query 4996 ATCTTTCAAGAGGAGTTTGGACCCGTTGGCTCACCCTCCTTTGAAACGGCAAGGG-GTAA 5054
|| |||||| | | | ||||| |||||||||| || |||||||||| ||| | | | ||
Sbjct 1012 ATTTTTCAACAAAACTATGGACTCGTTGGCTCAACCACCTTTGAAACAGCACGAGCG-AA 1070
Query 5055 CTTCCTCACCAGCAGTGCTGGTTACGCGGTGGCGAGTCTTTTACTCCAGTCCAAAGACAG 5114
|||||||| |||||||| || || || ||||| ||||||||||||||| ||||||| ||
Sbjct 1071 CTTCCTCATAAGCAGTGCCGGGTATGCTGTGGCTAGTCTTTTACTCCAGCCCAAAGATAG 1130
Query 5115 ACACAACGGCAATCTCCTCTACGACAACATGGGAAGGCTTGTTCACATTGATTTTGGTTT 5174
||||||||| |||||||| | ||| || ||||||| ||||| ||||| || ||||||||
Sbjct 1131 ACACAACGGAAATCTCCTTTTCGATGACGTGGGAAGACTTGTCCACATCGACTTTGGTTT 1190
Query 5175 CATTTTTGAAACCTCCCCTGGTGGAAACATGCGTTTTGAGAGCGCACATTTCAAACTGAG 5234
|||||| ||||| || ||||||||||||||| | || || | || ||||||||||||||
Sbjct 1191 CATTTTGGAAACTTCACCTGGTGGAAACATGAGGTTCGAAAATGCTCATTTCAAACTGAG 1250
Query 5235 CCACGAAATGACACAGTTGCTTGATCCATCAGG-GAATATGAAGAGCGAATCTTGGCATC 5293
|||||||||||| |||||||| ||||| ||||| | |||||| ||| || | |||||||
Sbjct 1251 CCACGAAATGACCCAGTTGCTAGATCCTTCAGGTGT-TATGAAAAGCAAAACATGGCATC 1309
Query 5294 AGTTTGTGAGCTTGTGCGTGAAGGGTTACTTGGCTGCTCGCCGGTACATGGAGGGGATCA 5353
||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||
Sbjct 1310 AGTTTGTGAGCTTGTGCGTCAAGGGATACTTAGCTGCTCGCCGGTACATGGACGAAATCA 1369
Query 5354 TCAGTACAGTGGAAATGATGGTGGAAAGTGGATTGCCTTGCTTCAGCAGAGGAGATCCAA 5413
| || || ||| |||||||| | |||||||||||||||||||| ||||||||||||||||
Sbjct 1370 TTAGCACGGTGCAAATGATGCTAGAAAGTGGATTGCCTTGCTTTAGCAGAGGAGATCCAA 1429
Query 5414 TTGAGAAA-CTTCGCAAGAGATTTCATCCC-GAGATGAGTGAGCGTGAAGCCGCACACTT 5471
| | | || ||| | || ||||| || ||| || ||||| || |||||||| |||| |||
Sbjct 1430 TAG-GTAATCTTAGGAAAAGATTCCA-CCCAGAAATGAGCGAACGTGAAGCTGCACTCTT 1487
Query 5472 CATGATCCATGTCTGTACCGATGCCTACAACAAATGGACCAC-GTATGGGTACGACTTGA 5530
||||| |||| ||||||||||| || ||||||||||| || | ||| || |||||||
Sbjct 1488 TATGATTAATGTATGTACCGATGCTTATAACAAATGGACTACTGC-TGGATATGACTTGA 1546
Query 5531 TACAGTATCTGCAACAAGGCATCGAGAAATAA 5562
| |||||| ||||||||||| | ||||| |||
Sbjct 1547 TTCAGTATTTGCAACAAGGCGTTGAGAAGTAA 1578
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 277674029505
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5