BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg345096 Length=672 Score E Sequences producing significant alignments: (Bits) Value AT2G33460.1 | Symbols: RIC1 | ROP-interactive CRIB motif-contai... 1033 0.0 > AT2G33460.1 | Symbols: RIC1 | ROP-interactive CRIB motif-containing protein 1 | chr2:14174590-14175838 REVERSE LENGTH=851 Length=851 Score = 1033 bits (559), Expect = 0.0 Identities = 638/676 (94%), Gaps = 5/676 (1%) Strand=Plus/Plus Query 1 ATGGCGACGACAATGAAGGGTCTTCTTAAGGGCCTTCGTTACATTACTCAGATTTTTGAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 ATGGCGACGACAATGAAGGGTCTTCTTAAGGGCCTTCGTTACATTACTCAGATTTTTGAT 236 Query 61 GAAGAGAAAGAGCAGGAGATGCAGATAGGATTTCCGACCGATGTAAAGCATGTTGCCCAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 237 GAAGAGAAAGAGCAGGAGATGCAGATAGGATTTCCGACCGATGTAAAGCATGTTGCCCAC 296 Query 121 ATTGGCTCCGACGGTCCAACCAACAACACGCCAAGCTGGATGAATGACTTTAAACCTCAA 180 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| Sbjct 297 ATTGGCTCCGACGGTCCAACCAACACCACACCAAGCTGGATGAATGACTTTAAAACTCAA 356 Query 181 GAACATGAGAAAGGTCAAGTCGTTTCCAGGGGAAATTCAAACAAATACAACCCGCAAGGG 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 357 GAACATGAGAAAGGTCAAGTCGTTTCCAGGGGAAATTCCAACAAATACAACCCGCAAGGG 416 Query 241 ATGAACCAACGTGGAGCCGGGCTAAAAGAGTTACTGCCTTCGAACACCAACGAGAAACCA 300 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 417 ACGAACCAACGTGGAGCCGGGCTAAAAGAGTTACTGCCTTCGAACACAAACGAGAAACCG 476 Query 301 AAACATAAAACAAGGCGGAAACCCGGGGGAGCAGCTTCTCCAAATC-TAAACGGGTCTCC 359 ||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct 477 AAACAGAAAACAAGGCGGAAACCCGGAGGAGCAGCTTCTCCAAATCATAA-CGGGTCTCC 535 Query 360 GCCTAGAAGAAGTAGCGGAAGTGCTGCATCATCAGATGAACCATCAAAGCATTCAAGACA 419 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 536 GCCTAGAAAAAGTAGCGGAAATGCTGCATCATCAGATGAACCATCAAAGCATTCAAGACA 595 Query 420 TAACCGAAGCGCACACGGGTCAATGGACTCATCGAATGATCAAGAACCTTCAGTTCGTAG 479 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || Sbjct 596 TAACCGAAGCGCACACGGGTCAACAGACTCATCGAATGATCAAGAACCATCAGTTCGCAG 655 Query 480 GAGGCATTGTGGTATCCCGGCTCCTGACACGGAAGTTTCTAATCATCTTGCTGATGGTTC 539 |||| | |||||||||||||||| ||||| |||||| ||||||| | |||||||||| Sbjct 656 AAGGCGTGGTGGTATCCCGGCTCCAGACACAGAAGTTCCTAATCAAATACCTGATGGTTC 715 Query 540 AGCTCCTCCACGGAAGGCTACATCGCGTCCAAGGAAACTAAAAGGATCATCAGCAGGAGG 599 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 716 AGCTCCTCCACGGAAGGCTACATCGCGTCCTAGGAAACTAAAAGGATCATCAGCAGGAGG 775 Query 600 AGAAGGTTCGGTTAAAAAATCAGCGAAAGGAAAACCCGAGAATTCAGTTGATACT---TG 656 |||||||||| |||| || || | ||||||||||||||||||||||||||||| || Sbjct 776 AGAAGGTTCGATTAAGAAGTCTTCAAAAGGAAAACCCGAGAATTCAGTTGATACAACCTG 835 Query 657 TAACGATATTATCTGA 672 |||||||||||||||| Sbjct 836 TAACGATATTATCTGA 851 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32501493109 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5