BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg345267
Length=3078
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing prote... 2394 0.0
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prot... 1748 0.0
> AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein
| chr2:14872320-14879739 FORWARD LENGTH=3369
Length=3369
Score = 2394 bits (1296), Expect = 0.0
Identities = 1410/1467 (96%), Gaps = 0/1467 (0%)
Strand=Plus/Plus
Query 1439 AGGATATAGCCCGGGCTCGGCCTGATCTGAAGTTATTGATATCCAGTGCAACCATGGATG 1498
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 AGGATATAGCACGGGCTCGGCCTGATCTGAAGTTATTGATATCCAGTGCAACCATGGATG 1791
Query 1499 CAGAGAAGTTTTCTGAtttttttGACCAAGCCCCTATCTTCAGTTTCCCAGGAAGAAGGT 1558
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1792 CAGAGAAGTTTTCTGATTTTTTTGACCAAGCCCCTATCTTCAGGTTCCCAGGAAGAAGGT 1851
Query 1559 ATCCTGTTGACATTTGCTTTACTACTGCACCTGAAGCTGATTACATGGACGCAGCAATAG 1618
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1852 ATCCTGTTGACATTTGCTTTACTACTGCACCTGAAGCTGATTACATGGACGCAGCAATAA 1911
Query 1619 TTACTGTCCTTACGATCCATGTGAAGGAGCCACTTGGGGATGTTTTGGTCTTCCTCCCAG 1678
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1912 CTACTGTGCTTACGATACATGTGAAGGAGCCACTTGGGGATGTTTTGGTCTTCCTCCCAG 1971
Query 1679 GTCAAGAGGAAATTGAGGCCGTAGAAGAGAACTTGAAGCACAAAATTAGAGGTTTGGGTA 1738
|||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||
Sbjct 1972 GTCAAGAGGAAATTGAAGCCGTAGAAGAGAACTTGAAGCACAAGATAAGAGGTTTGGGTA 2031
Query 1739 CAAAGATCCGCGAACTCATTATATGCCCAATTTACGCTAACCTTCCAAGTGAGCTCCAAG 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032 CAAAGATCCGCGAACTCATTATATGCCCAATTTACGCTAACCTTCCAAGTGAGCTCCAAG 2091
Query 1799 CAAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAAGTGGTGCTAGCGACAAATATTG 1858
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 2092 CAAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAAGTCGTGCTAGCAACTAATATTG 2151
Query 1859 CTGAAACATCATTAACCATTGATGGTATAAAGTATGTTGTTGATCCAGGCTTTAGCAAGA 1918
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2152 CTGAAACATCATTGACCATCGATGGTATAAAGTATGTCGTTGATCCAGGCTTTAGCAAGA 2211
Query 1919 TGAAGTCCTATAACCCTAGAACAGGGATGGAGTCTTTGCTTGTAACGCCTATCTCTAAGG 1978
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2212 TGAAATCCTATAACCCTAGAACAGGGATGGAATCTTTGCTTGTAACGCCTATCTCTAAGG 2271
Query 1979 CTTCAGCGACTCAACGAGCTGGTCGAGCTGGAAGAACCAGTCCAGGGAAGTGTTACCGCT 2038
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2272 CTTCAGCGACTCAACGAACTGGTCGAGCTGGAAGAACCAGTCCAGGGAAGTGTTACCGCC 2331
Query 2039 TGTACACGGCGTATAATTACTACAATGACTTGGAGGACAATACCGTACCAGAAGTACAGA 2098
|||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |
Sbjct 2332 TGTACACGGCGTTTAATTACTACAATGACTTGGAGGACAATACCGTACCTGAAATACAAA 2391
Query 2099 GGACGAATCTTGCTAGTGTGGTGCTTGCTTTGAAGAGTCTTGGTATTCATAATCTGCTGA 2158
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2392 GGACTAATCTTGCTAGTGTGGTGCTTTCTTTGAAGAGTCTTGGTATTCATAATCTGCTGA 2451
Query 2159 ACTTTGACTTTATGGACCCTCCGCCTTCTGAAGCTCTTATAAAGTCTTTAGAACTGCTCT 2218
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 2452 ACTTTGACTTTATGGACCCTCCGCCTTCTGAAGCTCTTATAAAGTCCTTAGAGCTGCTCT 2511
Query 2219 TTGCTCTGGGTGCTCTCAATCAGCTCGGCGAATTGACTAAAGCTGGTAGACGGATGGCAG 2278
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2512 TTGCTCTGGGTGCTCTCAATCAGCTTGGCGAATTGACTAAAGCTGGTAGACGGATGGCAG 2571
Query 2279 AGTTTCCCCTTGATCCAATGCTGTCGAAGATGATTGTTGTTTCTGACAAGTATAAGTGCT 2338
||||||| |||||||||||| |||||||||||||||||||||||||||| || || ||||
Sbjct 2572 AGTTTCCTCTTGATCCAATGTTGTCGAAGATGATTGTTGTTTCTGACAAATACAAATGCT 2631
Query 2339 CCGATGAGATCATATCAATTGCTGGTATGTTGTCCATCGGGCCTTCCATCTTCTACCGTC 2398
|||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| |
Sbjct 2632 CCGATGAGATTATATCAATTGCTGCTATGTTGTCCATCGGGCCTTCTATCTTTTACCGCC 2691
Query 2399 CCAAGGACAAGCAAGTTCATGCTGACAATGCAATGATGAATTTTAACGTTGGAAATGTCG 2458
||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct 2692 CCAAGGACAAGCAAGTTCACGCTGACAATGCAATGAAGAATTTTCACGTTGGAAATGTCG 2751
Query 2459 GTGATCACATCGCTTTGCTCAAGATTTACAATTCCTGGAAGGAAACGAACTACTCAACAC 2518
|||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 2752 GTGATCACATTGCTTTCCTGAAGATTTACAATTCGTGGAAGGAAACGAACTACTCAACAC 2811
Query 2519 AATGGTGCTACGAGAACTACATTCAGGTCCGAAGCATGAAAAGAGCCAGAGATATCCGTG 2578
||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||
Sbjct 2812 AATGGTGCTACGAGAACTATATTCAGGTTCGGAGTATGAAAAGAGCCAGAGATATCCGTG 2871
Query 2579 ATCAATTGGAGGGACTTCTCGAGAGAGTCGAAATAGATGTTAGCTCAAACGCGAACGAGT 2638
|||| |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct 2872 ATCAGTTGGAGGGTCTTCTCGAGAGAGTTGAAATAGACGTTAGCTCAAACGCGAATGAGT 2931
Query 2639 TGGATTCAATAAGAAAATCCATAGTAGCTGGTTTCTTTCCACACACTGCCAAGCTACAGA 2698
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2932 TGGATTCAATAAGAAAATCCATTGTAGCTGGTTTCTTTCCACACACTGCGAAGCTACAGA 2991
Query 2699 AGAATGGATCATATCGAACAGTGAAGCATCCCCAAACCGTACACATACATCCAGCCTCTG 2758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2992 AGAATGGATCATATCGAACAGTGAAGCATCCCCAAACCGTACACATACATCCAGCCTCTG 3051
Query 2759 GCTTATCTCAGGTACTGCCGAGATGGGTTGTATATCATCAACTAGTCCTTACCTCTAAGG 2818
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3052 GCTTATCTCAGGTATTGCCGAGATGGGTTGTATATCATCAACTAGTCCTTACCTCTAAGG 3111
Query 2819 AATACATGCGACAGGTAACAGAGTTAAAACCCGAGTGGTTGATTGAGATAGCTCCACACT 2878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3112 AATACATGCGACAGGTAACAGAGTTAAAACCCGAGTGGTTGATTGAGATAGCTCCACACT 3171
Query 2879 ATTATCAGCTCAAGGACGTTGAAGATG 2905
|||||||||||||||||||||||||||
Sbjct 3172 ATTATCAGCTCAAGGACGTTGAAGATG 3198
Score = 2196 bits (1189), Expect = 0.0
Identities = 1364/1448 (94%), Gaps = 14/1448 (1%)
Strand=Plus/Plus
Query 1 ATGGGGAGCAATGATTTGAACACCTGGGTTTCGGACAAGTTGATGGTTCTGCTAGGCTTT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 ATGGGGAGCAATGATTTGAACACCTGGGTTTCGGACAAGTTGATGGTTCTGCTAGGCTTT 170
Query 61 TCACAAACTGCTGTCGTGCAGTATCTAATTGCAATGGCTAAAAAATCAAAATCACCAGAT 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 171 TCACAAACTGCTGTCGTGCAGTATCTAATTGCAATGGCTAAACAATCAAAATCACCAGGT 230
Query 121 GAACTCGTCCGTGAGTTGGTTGACTACGGTTTTTCTTTGTCTGGTGATACCCGTGCTTTT 180
|||||||||||||| ||||| || | ||| ||||||||||| ||||||||||| || ||
Sbjct 231 GAACTCGTCCGTGAATTGGTGGAATGCGGGTTTTCTTTGTCCGGTGATACCCGCGCGTTC 290
Query 181 GCGGAAGAAATTTACGCCAGAGCTCCCCGGAAAACCGCTGGTGTGAATCTCTACCAGCAA 240
|| ||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||
Sbjct 291 GCAGAAGAAATTTATGCTAGAGCTCCCCGGAAAACCCCTGGAGTGAATCTCTACCAGCAA 350
Query 241 CAGGAAGCAGAGGCAGCGATGCTGTTGAAGAAGCAGAAGACTTTTTCCCTTTTAGAGGCT 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 351 CAGGAAGCAGAGGCAGCGATGCTGTTGAAGAAGCAGAAAACTTTTTCCCTTTTAGAGGCT 410
Query 301 GATCGTGATGAAGATGAAGGCTATGTGGAGAAACAATCTGCCTT-GAAAACCGGAAAGTC 359
|||| ||||||||||||| | ||||| ||||||||||||| || |||||||||||||||
Sbjct 411 GATCATGATGAAGATGAAAACAATGTGAAGAAACAATCTGC-TTCGAAAACCGGAAAGTC 469
Query 360 AGATAAAAGCCGAAAGAGGTTCAGGAAGAAAATTGAGCAACTGGAAGACGACGATGATGA 419
||||||| ||| |||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 470 AGATAAAGGCCAAAAGAGGTTCAGGAAGAAAAGTGAGCAATTGGAAGACGACGATGATGA 529
Query 420 TGAGGCAAATTTGATTGTTAAAGAGGACAAAAGGAATGTTAGGAGTAAGGTTTCCGAAGG 479
| | | | |||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 530 -G-GT-AG-T--GATTGTTAGAGAGGACAAAAGGAATGTTAGGAGAAAGGTTTCCGAAGA 583
Query 480 CGAGGATGATGGCACTGAGTCTGAAGAGGAAAGATTACGTGACCAAAGGGAGAGAGAAGA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 CGAGGATGATGGCACTGAGTCTGAAGAGGAAAGATTACGTGACCAAAGGGAGAGAGAAGA 643
Query 540 ACTGGAGCAGCATTTAAAAGATCGTGATACTGCACGGACACGAAAGCTAACAGAGCCAAA 599
||| |||||||| ||| ||| || |||||||||||||||||||||||||| ||||||||
Sbjct 644 ACTAGAGCAGCACCTAAGAGAACGAGATACTGCACGGACACGAAAGCTAACCGAGCCAAA 703
Query 600 AATGTCAAAGAAAGAGCAAGAAGAGTTTGTTCGAAGAGACAGTGCTGTAGAGAAGGGTGA 659
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 704 AATGTCAAAGAAAGAGCAAGAAGAGTTTGTTCGAAGAGATAGTGCTGTAGACAAGGGTGA 763
Query 660 TATTGTATCCTTAAGGAACTTCTCACGGCAAGAATATTTGAAGAAAAGGGAACAGAAGAA 719
||||| |||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||
Sbjct 764 TATTGAATCCTTAAGGAAATTCTCATGGCAAGAATATATGAAGAAAAGGAAACAGAAGAA 823
Query 720 ACTGGAAGAGCTGAAGGATGATCTAGAAGATGAACAATACCTTTTTGGAGATGAAAAGGT 779
| | |||||| ||||||||| |||||||||||| |||||||||||||||||||||| |
Sbjct 824 AGTACTAGAGCTAAAGGATGATATAGAAGATGAACCATACCTTTTTGGAGATGAAAAGCT 883
Query 780 CACTGAAAAAGAAATTCATGAATTTAGATACAAGaaaaaaaTCTATGAGGTCATAAAGAG 839
|||||||| |||||||| ||||||||||||||||| | ||||||||||| |||||||||
Sbjct 884 CACTGAAAGAGAAATTCGTGAATTTAGATACAAGAGAGAAATCTATGAGCTCATAAAGAA 943
Query 840 AAGTACACAAGAAGAAGATAATGTAGAAGAGTATAGAATGCCGGATGCATATGATCAACA 899
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 944 AAGTACACAAGAAGAAGATAATGTAGGAGAGTATAGAATGCCGGATGCATATGATCAACA 1003
Query 900 GGGAAGTGTTGATCAGGAGAAGAGATTTGCTGTTTCTGTACAA----A--GGGACATGGG 953
|||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct 1004 GGGAAGTGTTGATCAGGAGAAGAGGTTTGCTGTTTCTGTACAACGGTACAGGGACATGGG 1063
Query 954 TTCCGCGGAGAAAATGAACCCCTTTGCAGAGCAAGAAGCTTGGGAGGACCATCAGATTGA 1013
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064 TTCCGCAGAGAAAATGAACCCCTTTGCAGAGCAAGAAGCTTGGGAGGACCATCAGATTGA 1123
Query 1014 AAACGCAACATTAAAATTTGGTGCAAAGAATAAGGAGGTCTCAGACAATTACGAGTTTGT 1073
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124 AAACGCAGCATTAAAATTTGGTGCAAAGAATAAGGAGGTCTCAGACAATTACGAGTTTGT 1183
Query 1074 ATTTGAAGACCAAATAGACTTCATAAAGGCATCTGTGTTGGCTGGTGAAAATTATGAAGA 1133
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1184 ATTTGAAGACCAAATAGACTTCATAAAGGCATCTGTGTTGGCTGGTGATAATTATGAAGA 1243
Query 1134 TGAAATGCATGCTAAACCATCTCAAGATTCTGCTGGGAAATCTGCTTTTCATATGCTTCA 1193
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1244 TGAAATGCATGCTAAACCATCTCAAGATTCTGCTGGGAAATCGGCTTTTCATATGCTTCA 1303
Query 1194 GGAGGATAGAAAAGCTCTGCCAATTTATTCATATCGTGATCGACTTCTTAATGCTGTGAA 1253
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1304 GGAGGATAGAAAAGCTCTGCCAATTTATACATATCGTGATCAACTTCTTAATGCTGTGAA 1363
Query 1254 AGACCATCAGGTTCTTATCATTGTGGGGGAAACGGGTTCTGGCAAGACTACACAAATACC 1313
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1364 AGATCATCAGGTTCTTATCATTGTGGGGGAAACGGGTTCTGGCAAGACTACACAGATACC 1423
Query 1314 CCAATATCTTCACGAAGCTGGTTACACAAAGCATGGAAAGGTTGGTTGTACGCAGCCTCG 1373
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1424 CCAATATCTTCACGAAGCTGGTTACACAAAGCTTGGAAAGGTTGGTTGTACGCAGCCTCG 1483
Query 1374 AAGAGTTGCGGCTATGAGTGTGGCTGCTCGTGTTGCTCAAGAGATGGGTGGTAAACTTGG 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1484 AAGAGTTGCGGCTATGAGTGTGGCTGCTCGTGTTGCTCAAGAGATGGGTGGTAAACTTGG 1543
Query 1434 GCATGAGG 1441
||||||||
Sbjct 1544 GCATGAGG 1551
Score = 115 bits (62), Expect = 2e-24
Identities = 62/62 (100%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 3011 GCTACATCCAAGAAAATGCCCAAAACCAGTGGCCGAGCTGTGGTGTAGCAACTTTGATCA 3070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3198 GCTACATCCAAGAAAATGCCCAAAACCAGTGGCCGAGCTGTGGTGTAGCAACTTTGATCA 3257
Query 3071 AA 3072
||
Sbjct 3258 AA 3259
> AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein
| chr1:11742054-11749775 REVERSE LENGTH=3652
Length=3652
Score = 1748 bits (946), Expect = 0.0
Identities = 1302/1475 (88%), Gaps = 20/1475 (1%)
Strand=Plus/Plus
Query 1439 AGGATATAGCCCGGGCTCGGCCTGATCTGAAGTTATTGATATCCAGTGCAACCATGGATG 1498
|||||||||| ||| ||| |||||| ||||||| |||||||| |||||||| |||||||
Sbjct 1837 AGGATATAGCGCGGTTTCGACCTGATTTGAAGTTGTTGATATCTAGTGCAACAATGGATG 1896
Query 1499 CAGAGAAGTTTTCTGAtttttttGACCA-AGCCCCTATCTTCAGTTTCCCAGGAAGAAGG 1557
|||| || |||||||||| |||||| | |||||| || || ||||| || |||||||||
Sbjct 1897 CAGAAAAATTTTCTGATTATTTTGA-TACAGCCCCGATTTTTAGTTTTCCTGGAAGAAGG 1955
Query 1558 TATCCTGTTGACATTTGCTTTACTACTGCACCTGAAGCTGATTACATGGACGCAGCAATA 1617
||||| ||||| || || ||| | |||||||||||||||||||||||||||||| |||
Sbjct 1956 TATCCAGTTGAAATCAACTATACAAGTGCACCTGAAGCTGATTACATGGACGCAGCCATA 2015
Query 1618 GTTACTGTCCTTACGATCCATGTGAAGGAGCCACTTGGGGATGTTTTGGTCTTCCTCCCA 1677
|||||| |||||||||||||||||| |||||||||||| ||| | ||||||||| || |
Sbjct 2016 GTTACTATCCTTACGATCCATGTGAGGGAGCCACTTGGAGATATATTGGTCTTCTTCACT 2075
Query 1678 GGTCAAGAGGAAATTGAGGCCGTAGAAGAGAACTTGAAGCACAAAATTAGAGGTTTGGGT 1737
||||||||||||||||| | | |||||||| ||||||||||| || ||||||||||||
Sbjct 2076 GGTCAAGAGGAAATTGAAACTGCAGAAGAGATCTTGAAGCACAGGATAAGAGGTTTGGGT 2135
Query 1738 ACAAAGATCCGCGAACTCATTATATGCCCAATTTACGCTAACCTTCCAAGTGAGCTCCAA 1797
||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||||||
Sbjct 2136 ACAAAGATCCGTGAATTAATCATATGCCCAATTTACGCAAATCTTCCAAGTGAACTCCAA 2195
Query 1798 GCAAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAAGTGGTGCTAGCGACAAATATT 1857
|||||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct 2196 GCAAAAATATTTGAGCCAACTCCAGAAGGGGCACGTAAAGTTGTCCTAGCAACAAATATC 2255
Query 1858 GCTGAAACATCATTAACCATTGATGGTATAAAGTATGTTGTTGATCCAGGCTTTAGCAAG 1917
|| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2256 GCCGAAACATCATTGACAATTGATGGTATAAAGTATGTTGTTGATCCAGGCTTTAGCAAG 2315
Query 1918 ATGAAGTCCTATAACCCTAGAACAGGGATGGAGTCTTTGCTTGTAACGCCTATCTCTAAG 1977
|||||||| |||||||| || ||||||||||| ||||||||| | || ||||||||||||
Sbjct 2316 ATGAAGTCATATAACCCGAGGACAGGGATGGAATCTTTGCTTATTACTCCTATCTCTAAG 2375
Query 1978 GCTTCAGCGACTCAACGAGCTGGTCGAGCTGGAAGAACCAGTCCAGGGAAGTGTTACCGC 2037
||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 2376 GCTTCTGCAACTCAACGAGCTGGTCGTGCTGGAAGAACAAGTCCAGGGAAGTGTTATCG- 2434
Query 2038 T-TGTACACGGCGTATAATTACTACAATGACTTGGAGGACAATACCGTACCAGAAGTACA 2096
| ||||||| |||| ||||||| |||||||||||||||| || || || |||||||||||
Sbjct 2435 TCTGTACACTGCGTTTAATTACAACAATGACTTGGAGGAAAACACGGTGCCAGAAGTACA 2494
Query 2097 GAGGACGAATCTTGCTAGTGTGGTGCTTGCTTTGAAGAGTCTTGGTATTCATAATCTGC- 2155
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct 2495 GAGGACGAATCTTGCTAGTGTGGTGCTTGCTTTGAAGAGTCTTGGAATTCATGATCT-CA 2553
Query 2156 TGAACTTTGACTTT-ATGGACCCTCCGCCTTCTGAAGCTCTTATAAAGTCTTTAGAACTG 2214
| ||||| || ||| ||||||||||| ||| ||||||| ||| |||||||||||||||||
Sbjct 2554 TAAACTTCGA-TTTCATGGACCCTCCACCTGCTGAAGCACTTGTAAAGTCTTTAGAACTG 2612
Query 2215 CTCTTTGCTCTGGGTGCTCTCAATCAGCTCGGCGAATTGACTAAAGCTGGTAGACGGATG 2274
|||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||
Sbjct 2613 CTCTTTGCTCTGGGTGCTCTAAATAAGCTCGGGGAATTGACTAAAGCTGGTAGAAGGATG 2672
Query 2275 GCAGAGTTTCCCCTTGATCCAATGCTGTCGAAGATGATTGTTGTTTCTGACAAGTATAAG 2334
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2673 GCAGAGTTCCCCCTTGATCCAATGCTGTCGAAAATGATTGTTGTTTCTGACAAGTATAAG 2732
Query 2335 TGCTCCGATGAGATCATATCAATTGCTGGTATGTTGTCCATCGG-GCCTTCCATCTTCTA 2393
|||||||||||||| |||||||| |||| ||||||||| || || | || | ||||||||
Sbjct 2733 TGCTCCGATGAGATAATATCAATCGCTGCTATGTTGTCAATTGGTGGCT-CTATCTTCTA 2791
Query 2394 CCGTCCCAAGGACAAGCAAGTTCATGCTGACAATGCAATGA-TGAATTTTAACGTTGGAA 2452
||||||||||||||| ||||||||||| ||||| |||| || ||||||| || || |
Sbjct 2792 CCGTCCCAAGGACAAACAAGTTCATGCGGACAACGCAA-GAATGAATTTCCACACCGGGA 2850
Query 2453 ATGTCGGTGATCACATCGCTTTGCTCAAGATTTACAATTCCTGGAAGGAAACGAACTACT 2512
|||||||||| || || |||||||| ||| |||||| ||| ||||||||||| |||| ||
Sbjct 2851 ATGTCGGTGACCATATTGCTTTGCTAAAGGTTTACAGTTCATGGAAGGAAACAAACTTCT 2910
Query 2513 CAACACAATGGTGCTACGAGAACTACATTCAGGTCCGAAGCATGAAAAGAGCCAGAGATA 2572
| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2911 CTACTCAGTGGTGCTACGAGAACTACATTCAGGTCCGGAGCATGAAAAGAGCCAGAGATA 2970
Query 2573 TCCGTGATCAATTGGAGGGACTTCTCGAGAGAGTCGAAATAGATGTTAGCTCAAACGC-G 2631
|||||||||||||||||||||||||||| || || ||||||||| | ||||||||| | |
Sbjct 2971 TCCGTGATCAATTGGAGGGACTTCTCGAAAGGGTGGAAATAGATATCAGCTCAAAC-CTG 3029
Query 2632 AACGAGTTGGATTCAATAAGAAAATCCATAGTAGCTGG-TTTCTTTCCACACACTGCCAA 2690
|| || ||||||||| | ||||||||||| ||||| || ||| ||||| |||||||| ||
Sbjct 3030 AATGAATTGGATTCAGTTAGAAAATCCATCGTAGCCGGGTTT-TTTCCGCACACTGCAAA 3088
Query 2691 GCTACAGAAGAATGGATCATATCGAACAGTGAAGCATCCCCAAACCGTACACATACATCC 2750
|||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||
Sbjct 3089 GCTACAGAAGAATGGATCGTACCGAACAGTGAAACATCCCCAGACAGTGCACATACATCC 3148
Query 2751 -AGCCTCTGGCTTATCTCAGGTACTGCCGAGATGGGTTGTATATCATC-AACTAGTCCTT 2808
| || ||||||||||||||| |||||||||||||||||||||| | ||||||| |||
Sbjct 3149 CAAT-TCGGGCTTATCTCAGGTATTGCCGAGATGGGTTGTATATCA-CGAACTAGTACTT 3206
Query 2809 ACCTCTAAGGAATACATGCGACAGGTAACAGAGTTAAAACCCGAGTGGTTGATTGAGATA 2868
|| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||
Sbjct 3207 ACGTCCAAGGAATACATGCGACAGGTAACAGAGTTGAAACCAGAGTGGTTGATTGAGTTA 3266
Query 2869 GCTCCACACTATTATCAGCTCAAGGACGTTGAAGA 2903
||||| ||||| || ||||||||||||||||||||
Sbjct 3267 GCTCCTCACTACTACCAGCTCAAGGACGTTGAAGA 3301
Score = 1177 bits (637), Expect = 0.0
Identities = 1205/1473 (82%), Gaps = 64/1473 (4%)
Strand=Plus/Plus
Query 1 ATGGGGAGCAATGATTTGAACACCTGGGTTTCGGACAAGTTGATGGTTCTGCTAGGCTTT 60
|||| ||||||||||||||| || ||||||||||| ||| ||||| | || || ||||
Sbjct 216 ATGGCGAGCAATGATTTGAAGACTTGGGTTTCGGATAAGCTGATGATGCTACTTGGCTAC 275
Query 61 TCACAAACTGCTGTCGTGCAGTATCTAATTGCAATGGCTAAAAAATCAAAATCACCAGA- 119
|| ||| | ||||| || | ||||| |||||||||||||||||| ||||||||||| |
Sbjct 276 TCTCAAGCGGCTGTTGTTAACTATCTCATTGCAATGGCTAAAAAAACAAAATCACCA-AC 334
Query 120 TGAACTCGTCCGTGAGTTGGTTGACTACGGTTTTTC-TTTGTCTGGTGATACCCGTGCTT 178
|||||| || | |||||||| || ||||| ||||| | | ||||||||||| ||| | |
Sbjct 335 TGAACTTGTGGGAGAGTTGGTGGATTACGGGTTTTCGTCT-TCTGGTGATACTCGTTCGT 393
Query 179 TTGCGGAAGAAATTTACGCCAGAGCTCCCCGGAAAACCGCTGGTGTGAATCTCTACCAGC 238
|||| |||||||||| ||||||| |||||| ||||| |||||||| |||||||||||
Sbjct 394 TTGCAGAAGAAATTTTTGCCAGAGTTCCCCGTAAAACTGCTGGTGTAAATCTCTACCAAA 453
Query 239 AACAGGAAGCAGAGGCAGCGATGCT-GTTGAAGAAGCAGAAGACTTTTTCCCTTTTAGAG 297
|||| |||||||||||||| ||||| | ||| ||||||||| || | | | ||||||||
Sbjct 454 AACATGAAGCAGAGGCAGCAATGCTAG-TGAGGAAGCAGAAAACATATGCTCTTTTAGAT 512
Query 298 GCTGATCG-TGATGAAGATGAAGGCT-ATGTGGAGAAACAATC-T--GCCT-TGAAAACC 351
|||||| | ||||||||| ||| | | |||||||||| |||| | | | || || |
Sbjct 513 GCTGAT-GATGATGAAGACGAA-GTTGTTGTGGAGAAAAAATCTTCAGTTTCTG-AATCT 569
Query 352 GGAAAGTCAGATAAAAGC-CGAAAGAGGTTCAGGAAGAAAATTGAGCAACTGGAAGACGA 410
|||| |||||||| || |||| ||||| || ||||||| || || | | ||| ||
Sbjct 570 AGAAAATCAGATAAGGGCAAGAAA-AGGTTTAGAAAGAAAAGTGGGC-A--GTCAGATGA 625
Query 411 CGATGATGATGAGGCAAATTTGATTGTTAAAGAGGACAAAAGGA-ATGTTAGGAGTAAGG 469
| | |||| ||| | || |||| |||||| | | || | ||||| || ||||
Sbjct 626 --AAG-TGAT--GGC-GAGGTGGCCGTTAGAGAGGATAGTA-GACACGTTAGAAGAAAGG 678
Query 470 TTTCCGAAGGCGAGGATGATGGCACTGAGTCTGAAGAGGAAAGATTACGTGACCAAAGGG 529
|||| ||| ||||||||||| ||||||| |||||||||||| | |||||||||| ||
Sbjct 679 TTTCTGAA---GAGGATGATGGTTCTGAGTCAGAAGAGGAAAGAGTGCGTGACCAAAAGG 735
Query 530 AGAGAGAAGAACTGGAGCAGCATTTAAAAGATCGTGATACTGCACGGACACGAAAGCTAA 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 AGAGAGAAGAACTGGAGCAGCATTTAAAAGATCGTGATACTGCACGGACACGAAAGCTAA 795
Query 590 CAGAGCCAAAAAT-GTCAAAGAAAGAGCAAGAAGAGTTTGTTCGAAGAG-ACAGTGCTGT 647
|||||| ||| | ||||||||||||| |||||||| ||||||||||| | | |||| |
Sbjct 796 CAGAGC-AAACGTTGTCAAAGAAAGAGAAAGAAGAGGCTGTTCGAAGAGCAAA-TGCTTT 853
Query 648 AGAGAAGGGTGATATTGTAT-CCTTAAGGAACTTCTC-ACGGCAAGAATATTTGAAGAAA 705
||||||| |||| || ||| |||||||||| |||| | | |||||||| || |||||
Sbjct 854 GGAGAAGGATGAT-TTATATTCCTTAAGGAAAGTCTCGA-GACAAGAATACTTAAAGAAG 911
Query 706 AGGGAACAGAAGAAACTGGAAGAGCTGAAGG-ATGATCTAGAAGATGAACAATACCTTTT 764
|| ||||| ||||||||||| || || |||| |||| |||||||||||||||| |||||
Sbjct 912 AGAGAACAAAAGAAACTGGATGAACT-AAGGGATGAGATAGAAGATGAACAATATCTTTT 970
Query 765 TGGAGATGAAAAGGTCACTGAAAAAGAAATTCATGAATTTAGATACAAGaaaaaaaTCTA 824
|||| ||||||| |||| |||| || ||| ||| ||||| ||||||||| | | ||
Sbjct 971 CGGAGGTGAAAAGCTCACAGAAACGGAGCTTCGTGAGTTTAGGTACAAGAAAGAGCTTTA 1030
Query 825 TGAGGTCATAAAGAGAAGTACACAAGAAGAAGATAATGTAGAAGAGTATAGAATGCCGGA 884
||| || | |||| ||| |||||||| |||||||| || || ||||||||||| || ||
Sbjct 1031 TGACCTCGTGAAGAAAAGAACACAAGATGAAGATAACGTCGAGGAGTATAGAATTCCAGA 1090
Query 885 TGCATATGATCAACAGGGAAGTGTTGATCAGGAGAAGAGATTTGCTGTTTCTGT--A-C- 940
||| ||||||||| ||||| ||||||||||||||||||| ||| ||||| |||| | |
Sbjct 1091 TGCTTATGATCAAGAGGGAGGTGTTGATCAGGAGAAGAGGTTTTCTGTTGCTGTTCAACG 1150
Query 941 A-A-AGGGACATGGGTTCCGCGGAGAAAATGAACCCCTTTGCAGAGCAAGAAGCTTGGGA 998
| | |||||| ||| ||| | ||||||||||| || || ||||||||||||||||||||
Sbjct 1151 ATACAGGGACCTGGATTCAACAGAGAAAATGAATCCATTCGCAGAGCAAGAAGCTTGGGA 1210
Query 999 GGACCATCAGATTG-AAAACGCAACATTAAAATTTGGTGCAAAGAATAAGGAGGTCTCAG 1057
|||||||||||||| |||| |||||||||||||||||||||||||||||| | | |||||
Sbjct 1211 GGACCATCAGATTGGAAAA-GCAACATTAAAATTTGGTGCAAAGAATAAGCAAGCCTCAG 1269
Query 1058 ACAATTA-CGAGTTTGTATTTGAAGACCAAATAGACTTCATAAAGGCATCTGTGTTGGCT 1116
|| |||| | ||||||| ||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1270 ACGATTATC-AGTTTGTGTTTGAAGACCAAATAAACTTCATAAAGGAATCTGTCATGGCT 1328
Query 1117 GGTGAAAATTATGAAGATGAAATGCATGCTAAACCA---TCTCAAGATTCTG-CTGGGAA 1172
||||||||||||||||||| ||| |||| |||| | |||||||||| || | | |||
Sbjct 1329 GGTGAAAATTATGAAGATGCTATGGATGCAAAACAAAAATCTCAAGATT-TGGCAGAGAA 1387
Query 1173 ATCTGCTTTTCAT-ATGCTTCAGGAGGAT-AGAA-AAGCTCTGCCAATTTATTCATATCG 1229
| | ||||| | | |||||||| | | |||| ||| |||||| |||||| | |||||
Sbjct 1388 AACAGCTTTAGAGGAA-CTTCAGGAAG-TCAGAAGAAG-TCTGCCGATTTATACGTATCG 1444
Query 1230 TGATCGACTTCTTAATGCTGTGAAAGACCATCAGGTTCTTATCATTGTGGGGGAAACGGG 1289
||||| ||| ||||| |||||| |||| |||||||||||| |||||||||| || || ||
Sbjct 1445 TGATCAACTGCTTAAGGCTGTGGAAGAGCATCAGGTTCTTGTCATTGTGGGAGACACTGG 1504
Query 1290 TTCTGGCAAGACTACACAAATACCCCAATATCTTCACGAAGCTGGTTACACAAAGCATGG 1349
||| || || || ||||||||||| |||||||| || ||||||||||||||||||| |||
Sbjct 1505 TTCAGGAAAAACGACACAAATACCACAATATCTCCATGAAGCTGGTTACACAAAGCGTGG 1564
Query 1350 AAAGGTTGGTTGTACGCAGCCTCGAAGAGTTGCGGCTATGAGTGTGGCTGCTCGTGTTGC 1409
||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 1565 AAAGGTTGGTTGTACGCAGCCCCGAAGAGTTGCAGCTATGAGTGTTGCTGCCCGTGTGGC 1624
Query 1410 TCAAGAGATGGGTGGT-AAACTTGGGCATGAGG 1441
|||||||||||||| | ||||| || |||||||
Sbjct 1625 TCAAGAGATGGGTG-TCAAACTCGGACATGAGG 1656
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 153059343093
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5