BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg345321 Length=1581 Score E Sequences producing significant alignments: (Bits) Value AT2G35890.1 | Symbols: CPK25 | calcium-dependent protein kinase... 2344 0.0 > AT2G35890.1 | Symbols: CPK25 | calcium-dependent protein kinase 25 | chr2:15067175-15069136 REVERSE LENGTH=1563 Length=1563 Score = 2344 bits (1269), Expect = 0.0 Identities = 1484/1585 (94%), Gaps = 26/1585 (2%) Strand=Plus/Plus Query 1 ATGGGGAATGTATGTGTTCATATGGTCAACAATTGTGTGGATACGAAATCAAATTCATGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 ATGGGGAATGTATGTGTTCATATGGTCAACAATTGTGTGGATACGAAATCGAATTCATGG 60 Query 61 GTTCGTCCCACAGATCTCATCATGGATCATCCCTTGAAGCCACAACTCCAAGACAAGCCT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 GTTCGTCCCACAGATCTCATCATGGATCATCCCTTGAAGCCACAACTCCAGGACAAGCCT 120 Query 121 CCTCGGCCAATGCTAATGTACAAGGATGATGATAAACCCAAGCTTAATGAAACTCATGGA 180 |||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| Sbjct 121 CCTCAGCCAATGCTAATGAACAAGGATGATGATAAAACCAAGCTTAATGACACTCATGGT 180 Query 181 GACCCTAAATTACTTGAAGAGAAGGCA-AAACCTGCGCAGAAGCAAACGAGTTGGGAACA 239 ||||||||||||||||| | ||| | | ||||||||||||||||||||||| | | Sbjct 181 GACCCTAAATTACTTGAGGGGAAAG-AGAAACCTGCGCAGAAGCAAACGAG-T-----C- 232 Query 240 AGAAGGA-AGGGTGAGTGAAACAACAAAGAAGTGCAGTGAAGAAGAGAATAAGAAGCGTG 298 || ||| | | ||| | || |||||||||||| |||||| |||||||||| | Sbjct 233 AG--GGACA-AG-GAG-G-------AAGGAAGTGCAGTGACGAAGAGTATAAGAAGCGAG 280 Query 299 CGATTGCGTGTGGTAACAGCAAAAGAAAAGCTCACAACGTAAGGAGACTGATGAGTGCAG 358 |||||||||||| |||||| |||||||| |||||||| || ||||||||||||||||||| Sbjct 281 CGATTGCGTGTGCTAACAGTAAAAGAAAGGCTCACAATGTGAGGAGACTGATGAGTGCAG 340 Query 359 GGCTTCAAGCAGAGTCAGTATTGAAGACCAAGACGGGGCATTTGAAAGAGTATTATAACT 418 |||| |||||||||||||| ||||||||||| || ||||||||||| || |||||||||| Sbjct 341 GGCTACAAGCAGAGTCAGTGTTGAAGACCAAAACAGGGCATTTGAAGGAATATTATAACT 400 Query 419 TGGGAAGCAAGTTAGGTCATGGACAGTTTGGGACGACGTTCGTGTGTGTTGAGAAAGGAA 478 |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 401 TGGGTAGCAAGTTAGGTCATGGACAGTTTGGGACTACGTTTGTGTGTGTTGAGAAAGGAA 460 Query 479 CAGGGGAGGAATACGCGTGCAAGTCTATACCGAAGAGGAAGCTAGAGAACGAAGAAGACG 538 ||||||||||||| || |||||||| || ||||||||||||||||||||||||||||||| Sbjct 461 CAGGGGAGGAATATGCATGCAAGTCGATTCCGAAGAGGAAGCTAGAGAACGAAGAAGACG 520 Query 539 TGGAGGATGTAAGAAGAGAGATTGAGATAATGAAACATCTCTTGGGGCAACCAAATGTGA 598 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 521 TGGAGGATGTGAGAAGAGAGATTGAGATAATGAAACATCTCTTGGGGCAACCAAATGTGA 580 Query 599 TCTCCATCAAAGGAGCTTATGAGGACTCAGTGGCTGTTCACATGGTGATGGAGCTGTGTA 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 581 TCTCCATCAAAGGAGCTTATGAGGACTCAGTGGCTGTTCACATGGTGATGGAGCTGTGTA 640 Query 659 GAGGAGGTGAGCTGTTTGATAGAATAGTGGAGAGAGGGCATTACTCTGAGAGAAAAGCAG 718 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 641 GAGGAGGTGAGCTGTTTGATAGGATAGTGGAGAGAGGGCATTACTCTGAGAGAAAAGCTG 700 Query 719 CTCATTTGGCTAAGGTCATACTTGGTGTGGTCCAGACTTGTCATTCTTTAGGTGTGATGC 778 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 701 CTCATTTGGCTAAAGTCATACTTGGTGTGGTTCAGACTTGTCATTCTTTAGGTGTGATGC 760 Query 779 ATAGAGATCTTAAACCTGAGAACTTTCTCTTTGTCAACGATCACGAGGATTCGCCTCTTA 838 | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 761 ACAGAGATCTTAAACCTGAGAACTTTCTCTTTGTCAACGATGACGAGGATTCGCCTCTTA 820 Query 839 AGGCTATTGATTTTGGGTTATCTATGTT-CGTCAAGCCTGGAGAAAACTTTACGGATGTG 897 ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 821 AGGCTATTGATTTCGGGTTATCTATGTTTC-TCAAGCCTGGAGAAAACTTTACGGATGTG 879 Query 898 GTTGGAAGTCCCTACTACATTGCGCCTGAAGTTCTCAACAAGAATTACGGTCCAGAAGCA 957 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 880 GTTGGAAGTCCCTACTACATTGCGCCTGAAGTTCTGAACAAGAATTACGGTCCAGAAGCA 939 Query 958 GATATTTGGAGCGCCGGTGTTG-TGATTTATGTGCTACTGTCTGGTTCAGCTCCATTTTG 1016 ||||| |||||||| ||||| | ||||||| ||| ||||||||||||||||||| ||||| Sbjct 940 GATATATGGAGCGCAGGTGT-GATGATTTACGTGTTACTGTCTGGTTCAGCTCCGTTTTG 998 Query 1017 GGGAGAGACGGAAGAAGAAATCTTCAATGAGGTTCTGGACGGTGAGCTTGATTTGTCATC 1076 |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 999 GGGAGAAACGGAAGAAGAAATCTTCAATGAGGTTCTGGAGGGTGAGCTTGATTTGACATC 1058 Query 1077 AGATCCTTGGCCACAAGTTTCTGAAAGCGCAAAAGATTTGATCAGAAAGATGCTCGAACG 1136 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct 1059 AGATCCTTGGCCACAAGTCTCTGAAAGCGCAAAAGATTTGATCAGAAAGATGCTTGAAAG 1118 Query 1137 AAATCCCAAACAAAGACTCACTGCTCAACAAGTCTTGTGCCATCCATGGATTAGGGATGA 1196 |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1119 AAATCCCATACAAAGACTCACTGCTCAACAAGTATTATGCCATCCATGGATTAGGGATGA 1178 Query 1197 AGGAACTGCACCAGATACACCGCTTGACACGACTGTTTTGAGTCGCTTGAAGAAGTTTTC 1256 ||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 1179 AGGAAATGCACCAGATACACCACTTGACACAACTGTGTTGAGTCGCTTGAAGAAGTTTTC 1238 Query 1257 AGCTACAGACAAGCTCAAGAAGATGGCTTTAAGGGTGATTGCAGAAAGGCTTTCCGAACA 1316 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 1239 AGCAACAGACAAGCTTAAGAAGATGGCTTTAAGGGTGATTGCAGAAAGGCTTTCCGAAGA 1298 Query 1317 AGAGATTCACGAGCTTAGAGAAACCTTCAAGATTATAGACAGTGAAAAGAGCGGGCGAGT 1376 ||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct 1299 AGAGATTCACGAGCTCAGAGAAACATTCAAGACTATAGACAGTGGAAAGAGCGGGCGAGT 1358 Query 1377 AACTTATAAAGAACTCAAAAGTGGTCTTGAAAGATTTAACACAAATCTTGACGACTCTGA 1436 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1359 AACTTATAAAGAACTCAAAAACGGTCTTGAAAGATTTAACACAAATCTTGACAACTCTGA 1418 Query 1437 CATCAATAGTCTTATGCAAATGCCAACGGATGTGCACTTGGAAGACACAGTAGACTACGA 1496 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 1419 CATCAATAGTCTTATGCAAATACCAACGGATGTGCACTTGGAAGACACAGTAGACTACAA 1478 Query 1497 GGAATTCATAGAGGCGATTGTAAGACTGAGACAAATACAAGAAGAGGAACCAAAGGATCG 1556 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1479 CGAATTCATAGAGGCGATTGTAAGACTGAGACAAATACAAGAAGAGGAAGCAAATGATCG 1538 Query 1557 TTTAGAATCATCAACAAAAGTGTAA 1581 ||||||||||||||||||||||||| Sbjct 1539 TTTAGAATCATCAACAAAAGTGTAA 1563 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78061847475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5