BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg345328 Length=630 Score E Sequences producing significant alignments: (Bits) Value AT2G35950.1 | Symbols: EDA12 | embryo sac development arrest 12... 893 0.0 > AT2G35950.1 | Symbols: EDA12 | embryo sac development arrest 12 | chr2:15104761-15106088 FORWARD LENGTH=967 Length=967 Score = 893 bits (483), Expect = 0.0 Identities = 577/622 (93%), Gaps = 8/622 (1%) Strand=Plus/Plus Query 11 GTTCTCGTTCTCGTTCTCATCTGTTCCTCAACGAGTTCGAAACGTCTGTCGGAGGATTCT 70 ||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 117 GTT-TCGTTCTCGTTCTCATCTGTTCCTCAACGAGTTCGAAACGTCTGCCGGAAGATTCA 175 Query 71 ACTCT-CTCCGCCGTAACCACCGTGACCATCCGTACGTTTCCGACGCTGTGGACACACTC 129 ||| | ||| |||||||||||||||| |||| |||||||||||||| |||||| |||||| Sbjct 176 ACT-TGCTCAGCCGTAACCACCGTGATCATCTGTACGTTTCCGACGTTGTGGATACACTC 234 Query 130 TCTGATCAGTTCTCTTCCATGTCTCTTCTCCGTCCTAAACCCAGACCGATTCCTGCTTTA 189 ||||| ||||||||||| ||||||||||||| |||||||||||||| | ||||| |||| Sbjct 235 TCTGAACAGTTCTCTTCGATGTCTCTTCTCCATCCTAAACCCAGACTGGTTCCTACTTTG 294 Query 190 TCTTCGAGTCTTCAGTCTTCTTTAAGGCTTAATGGTGTTAAAGCTGATCAGAGATTGTAC 249 |||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 295 CCTTCGAGTCTCCAGTCTTCTTTAAGGCCTAATGGTGTTAAAGCTTATCAGAGATTGTAC 354 Query 250 CGAGAAAGGCTCAAGCTTGAACCGTTTTATGAACTTCATCTTTCAAGGATCCGCAAAAAC 309 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 355 CGAGAAAGGCTCAAGCTTGAACCTTTTTATGAACTTCATCTTTCAAGGATCCGC--AAA- 411 Query 310 GAGTCACAACAAGACAGAGCTAAGGTTTTACAGAGACAAGAGGCACGGCTAAACAAGAGA 369 |||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||| Sbjct 412 GAGTCACAGCAAGATAGAGCTAAGGTTTTACAGAGACAAGAGGCACGGCTACAGAAGAGA 471 Query 370 GGTTTGGCTCATCGAAACGGTAACGTTTTGAAGGAATCTGTAGGAACCGGCGTTTTCCAC 429 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 472 GGTTTGGTTCACCGAAACGGTAACGTTTTGAAGGAATCTGTAGGAACCGGCGTTTTTCAC 531 Query 430 CCTCTTCAGCGTCCAACTTTTAAGACTTGTGACTCTGTGAAGAAACATAATCAAAGGAAT 489 |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| Sbjct 532 CCTCTTCAGCGTCCAACTTTCAAGACTTTTGACCCTGTGAAGAAGCATAATCAAAGGAAT 591 Query 490 CGGAATCAACGTGAGAAGGAGTTGT-TGACCAAAGAAAAAAGAGGAGTAATGACTACTAC 548 ||||||||| ||||||||||||| | |||||||||||||||||||||| |||||| |||| Sbjct 592 CGGAATCAAAGTGAGAAGGAGTT-TATGACCAAAGAAAAAAGAGGAGTGATGACTTCTAC 650 Query 549 AACGCATGAGCAGCAACAGAAGGAAGAGTGTCATTATCATTTGCCTTCAGACATGGATTT 608 |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 651 AACGCAGGAGCAGCAACAGAAAGAGGAGTGTCATTATCATTTGCCTTCAGACATGGATTT 710 Query 609 CTCCAAGGACTGGACTTTCTGA 630 |||||||||||||||||||||| Sbjct 711 CTCCAAGGACTGGACTTTCTGA 732 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30391658935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5