BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg345344 Length=474 Score E Sequences producing significant alignments: (Bits) Value AT2G36130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-... 673 0.0 > AT2G36130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr2:15166773-15168497 FORWARD LENGTH=823 Length=823 Score = 673 bits (364), Expect = 0.0 Identities = 456/496 (92%), Gaps = 23/496 (5%) Strand=Plus/Plus Query 1 ATGTCGGCGAGACCTGAAGGAAGTCCGCCGGAGGTTACGCTCGAGACCTCCATGGGTCCT 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 ATGTCGGCAAGACCTGAAGGAAGTCCGCCGGAGGTTACGCTCGAGACCTCCATGGGTCCT 150 Query 61 TTCACCGTCGAGATGTATTATAAACACTCCCCGAGAACTTGCCGGAACTTCGTTGAACTA 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| Sbjct 151 TTCACCGTCGAGATGTATTACAAACACTCCCCGAGAACTTGCCGGAACTTCCTTGAGCTA 210 Query 121 TCCC------G--A--A-G---A-G----G--TCACAGAATCGTCAAGGATTTCATTGTG 159 |||| | | | | | | | |||||||||||||||||||||||||||| Sbjct 211 TCCCGGAGAGGTTACTATGACAACGTTCTGTTTCACAGAATCGTCAAGGATTTCATTGTG 270 Query 160 CAAGGTGGGGATCCTACAGGAACTGGAAGAGGTGGTGAATCCATTTATGGTTCGAAGTTT 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 271 CAAGGTGGGGATCCTACAGGAACTGGAAGAGGTGGTGAATCCATTTATGGTTCGAAGTTT 330 Query 220 GAGGATGAGATAACCAAAGAGTTGAAGCACACAGGAGCTGGAATTTTATCAATGGCAAAC 279 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 331 GAGGATGAGATAAACAAAGAGTTGAAGCACACAGGAGCCGGAATTTTATCAATGGCGAAC 390 Query 280 GCTGGTCCTAATACAAATGGGAGTCAATTCTTT-ATTACTTTAGCGCCACAACCGTCCTT 338 ||||||||||||||||||||||||||||| ||| || || ||||| |||||||||||||| Sbjct 391 GCTGGTCCTAATACAAATGGGAGTCAATT-TTTCATCACCTTAGCCCCACAACCGTCCTT 449 Query 339 GGATGGAAAGCACACAATATTTGGCAGAGTGTGCCGTGGTATGGAGGTGATCAAGAGGCT 398 ||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 450 GGATGGAAAACACACAATATTTGGTAGAGTGTGCCGAGGCATGGAGGTGATCAAGAGGCT 509 Query 399 CGGTAGTGTCCAAACCGATAACACCGACAGGCCAATCCATGAAGTGAAGATTCTGAGGAC 458 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 510 CGGTAGTGTCCAAACCGATAACACCGACAGGCCGATCCATGAAGTGAAGATTCTAAGGAC 569 Query 459 TAAAGTGATCGATTGA 474 ||||||||||||||| Sbjct 570 CAAAGTGATCGATTGA 585 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22555132003 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5