BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg345530
Length=2736
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37670.1 | Symbols: | Transducin/WD40 repeat-like superfami... 4252 0.0
AT5G02430.1 | Symbols: | Transducin/WD40 repeat-like superfami... 525 8e-148
> AT2G37670.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:15797384-15800536 REVERSE LENGTH=2712
Length=2712
Score = 4252 bits (2302), Expect = 0.0
Identities = 2594/2734 (95%), Gaps = 23/2734 (1%)
Strand=Plus/Plus
Query 4 ATGGAAGATGGGAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 60
Query 64 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCA 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCT 120
Query 124 GCTTTAGCTTTTGACATGTCTGCTGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 183
|||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTTTAACTTTCGACATGGCTAATGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 180
Query 184 TGCCGTCTCTCGTTTTCCTCTGCCGTTTCTTCGTTAACCACCGCGTCAAGGAAATTTCGT 243
|| || ||||||||||| || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct 181 TGTCGACTCTCGTTTTCTTCAGCCGTCTCTTCCTTAACCACCGCCTCTAGGAAATTTCGT 240
Query 244 ACGCCGGCGATGTCTCCTGATTAAGATATTTGGATGGCTGCTCCGGGATCAATATCTGAG 303
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 241 ACGCCGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCTATATCTGAG 300
Query 304 CGTCGTCGTCGTCTTCTCCATGGGATGGGGCTTGTTAGTAATAAAGATATGGTTAGTGCT 363
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 301 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGCTAGTAATAAAGATATGGTTAGTGCT 360
Query 364 GTTTCTATTCGTCGTGTTGTTTCTAACGCGGCTATTGTTACTAATGGtgaagataagaag 423
||||| |||||||| ||||||||||| ||| || |||||| ||| |||||||| ||||||
Sbjct 361 GTTTCCATTCGTCGCGTTGTTTCTAATGCGCCTGTTGTTAGTAACGGTGAAGAAAAGAAG 420
Query 424 atgaagaagaagattatgaatggtgaagttgatgatgaaTCGGAGATTCCTCAAGATCAT 483
|||||||||||| |||||| || || | | || || || | |||||||||
Sbjct 421 ATGAAGAAGAAG---ATGAATCATG-AG--G-T--TG-AT--GA-A-----CAAGATCAT 462
Query 484 GATCATGTTCCGGTTATGCTTGCTAGGTCGAGATCGGAATCAGATATTGAGAGGTTCTTG 543
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 463 GATCATGTTCCGGTTATGCTTGCGAGGTCAAGATCGGAATCAGATATTGAGAGGTTCTTG 522
Query 544 ATTGAGAAACGAAGAAAAGAAGAGATTTTAGGGAAGATCTCGAAGCAGCGTCTTACGAGA 603
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct 523 ATTGAGAAACGAAGAAAAGAAGAGATTTTAGGGAAAATCTCAAAGCAGCGTCTTACAAGA 582
Query 604 ACGTATTCGACAATTGGAGTTACAAGGACAAGGATTTGTCAGTACCAAACACCGATCAGG 663
|||||||| || ||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct 583 ACGTATTCTACTATTTGTCCTACAAGGACAAGGATTTGTCAGTACCAAACTCCGATCAGA 642
Query 664 CAATCGCCTGCGGTTTGTCGAAATGGAAAAGCTTTGCGCGGTGGTGGTTCGGATGCGTTG 723
||| | |||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct 643 CAAACACCTGCGGTTTGTGGAAATGGAAAAGCTTTGCGCGGTGGTGG---AGAGGCGTTG 699
Query 724 ACATCGGTTATGTCGAATGCGAGGCTTGGCGCGTTTTTCTTGATTAAGAATCTTGATACA 783
|||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 700 ACATCGGTAATGTCGAATGCGAGGGTTGGCGCGTTTTTCTTGATAAAGAATCTTGATACA 759
Query 784 GGGAAAGAGTTTATAGTGAATGAGTATGATGAAGATGGAATGTGGAATAGGCTTAGTGAT 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 GGGAAAGAGTTTATAGTGAATGAGTATGATGAAGATGGAATGTGGAATAGGCTTAGTGAT 819
Query 844 TTGCAAACAGGGAAGCAATTAACTTTGGAGGAATTTGAGAAATGTGTTGGTTATTCACCT 903
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 820 CTGCAAACAGGGAAGCAATTAACTTTGGAGGAGTTTGAGAAATGTGTTGGTTATTCACCT 879
Query 904 GTGGTTAAAGAGCTTATGCGTAGAGAGAATGTGAATAGGATTAACTACGAACCGTTAATG 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GTGGTTAAAGAGCTTATGCGTAGAGAGAATGTGAATAGGATTAACTACGAACCGTTAATG 939
Query 964 GATCTTCGGAAGTTTAATTCGTATCTTTCGAAAAGCGTGAGGTTAAGTAAGAGAAGGGGT 1023
|||||||| |||||||||||||||||||| || || |||||||||||||||||||| ||
Sbjct 940 GATCTTCGCAAGTTTAATTCGTATCTTTCCAAGAGTGTGAGGTTAAGTAAGAGAAGAGGA 999
Query 1024 GCTGCATTGTTGAAGAACATAAAAGGTGTAGCTCATTCCATGAGTTTACGGGTTGCGGAT 1083
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1000 GCTGCATTGTTGAAGAACATTAAAGGTGTAGCTCATTCCATGAGTTTACGCGTTGCGGAT 1059
Query 1084 AAAGATGTAAGCGATGGAAGCACCGATAGTCCGAAAAAGGGGAAAGATCATAAGCATGGT 1143
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1060 AAAGATGTAAGCGATGGAAGCACTGATAGTCCGAAAAAGGGGAAAGATCATAAACATGGT 1119
Query 1144 AAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAATTAAGTGCT 1203
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1120 AAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAGTTAAGTGCT 1179
Query 1204 TTGCATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAATTTAGT 1263
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1180 TTACATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAGTTTAGT 1239
Query 1264 CAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTATGGGAGGTT 1323
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1240 CAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTGTGGGAGGTT 1299
Query 1324 CAAGAATGTGAACTAATGTCTATGAATGAAGGGAGTCTCACTCCTATTCATCCTTCACTT 1383
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1300 CAAGAATGTGAACTAATGTCTATGAATGAAGGAAGTCTCACTCCTATTCATCCTTCACTT 1359
Query 1384 TGTGACTCTGCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAGGAAAGGAAAAGGCTCT 1443
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct 1360 TGTGACTCTTCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAAGAAAGGAAAGGGATCA 1419
Query 1444 TC-GGGAAGACGAAACAATCATATTCCGGATTACGTCCATGTTCCTGAAACCGTCTTCTC 1502
|| |||| ||||| |||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1420 TCCGGGA-GACGACACAATCATATTCCGGATTACGTACATGTTCCTGAAACAGTCTTCTC 1478
Query 1503 CTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATTTGGATGCTATTTTGGATCTGTC 1562
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1479 GTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATCTGGATGCTATTTTGGATCTTTC 1538
Query 1563 ATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCCATGGACAAAACAGTCAGGTTATGGGA 1622
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1539 ATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCTATGGACAAAACAGTCAGGTTATGGGA 1598
Query 1623 TCTAGAAACCAAAACATGTCTCAAATTGTTTGCTCATAATGACTACGTGACATGTATCCA 1682
| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||
Sbjct 1599 TATAGAAACCAAAACATGTCTCAAACTGTTTGCCCATAATGACTATGTGACATGTATTCA 1658
Query 1683 GTTTAGCCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAGATAAGGAT 1742
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1659 GTTCAGTCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAAATAAGGAT 1718
Query 1743 ATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACTGC 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1719 ATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACTGC 1778
Query 1803 TGCTTGCTACACTCCAGACGGTCAGGGTGCACTTATCGGTTCACATAAAGGAATTTGTCG 1862
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1779 TGCTTGCTACACACCAGACGGTCAGGGTGCACTTATCGGGTCACATAAAGGAATTTGTCG 1838
Query 1863 TGCTTACGATACAGAAGATTGTAAGCTGAGCCAAACTAGTCAGATTGATGTTCAGAGCAA 1922
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1839 TGCTTACGATACAGAAGATTGTAAGCTGAGCCAAACTAATCAGATTGATGTTCAGAGCAA 1898
Query 1923 TAAGAAATCGCAAGCGAAAAGGAAGATCACTAGTTTTCAGTTTTCCCCGGTGAATCCATC 1982
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1899 CAAGAAATCACAAGCGAAAAGGAAGATCACTAGTTTTCAGTTTTCCCCGGTGAATCCATC 1958
Query 1983 CGAAGTTCTTGTCACATCCGCTGATTCACGGATTCGAATATTAGACGGTTCTGAAGTTAT 2042
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1959 TGAAGTTCTTGTCACATCCGCTGATTCACGGATTCGAATACTAGACGGTTCTGAAGTTAT 2018
Query 2043 TCACAAATTCAAAGGCTTTAGAAACACGTGTAGCCAACTCTCTGCTTCCTATAGCCAAGA 2102
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2019 TCACAAATTCAAAGGCTTTAGAAACACATGTAGCCAACTCTCTGCTTCGTATAGCCAAGA 2078
Query 2103 TGGGAAATACATAATATGTGCAAGTGAAGACTCTCAGGTTTACTTATGGAAGAATGACTT 2162
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 2079 TGGGAAATACATAATATGTGCGAGTGAAGACTCTCAAGTTTACTTATGGAAGAATGACTT 2138
Query 2163 TCAACGAACAAGATCAACACTCACGACACAATCTCACGAACACTTTCATTGCAAAGATGT 2222
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2139 TCACCGAACAAGATCAACACTCACGACACAATCTCACGAACATTTTCATTGCAAAGATGT 2198
Query 2223 CTCAGCCGCTGTTCCTTGGCACGGTCATGTTAGAGGTGAGCCACCACCAGTTCAGATTCA 2282
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2199 CTCAGCCGCTGTTCCTTGGCATGGTCATGTTAGAGGTGAGCCACCACCAGTTCAGATTCA 2258
Query 2283 TTCTAAACGCCACTCAAAGCGCATATCCACTTCTAGCCAGCCTTCATCCACCATAGGCTC 2342
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||
Sbjct 2259 CTCTAAACGCCACTCAAAGCGCATATCTACTTCAAGCCAGCCTTCATCCACCATAAGCTC 2318
Query 2343 ACCAACAAGAGAAGAAACCTCGGCGGCTGCACCAACTACATCTAACCGGAATAAAAAATC 2402
|||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2319 ACCAACAAAAGAAGAAACCTCGGCGACTGGACCAACTACATCTAACCGGAATAAAAAATC 2378
Query 2403 AGGGTTACCTCCTATGCCTAAGAAAGCCGCTACGAAGAGTCAGATTCAACCAGAGGAAGA 2462
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2379 AGGGTTACCTCCAATGCCTAAGAAAGCCGCTACAAAGAGTCAGATTCAACCAGAGGAAGA 2438
Query 2463 GGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCAAGCATGAACTGTTCGGAGCA 2522
||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct 2439 GGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCGAGTATGAACTCTTCGGAGCA 2498
Query 2523 GCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTCATG 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2499 GCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTCTTG 2558
Query 2583 GTCGTGGTTCGACAGTGGAGGTCATGGTCCGCAAACTATACAGCCAACGGCTTGGGGGAT 2642
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2559 GTCATGGTTCGACAGTGGAGGGCATGGTCCGCAAACTATACAGCCAACGGCTTGGGGGAT 2618
Query 2643 GGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAATTTTGGTTTACC 2702
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2619 GGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAACTTTGGTTTACC 2678
Query 2703 GAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 2736
||||||||||||||||||||||||||||||||||
Sbjct 2679 GAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 2712
> AT5G02430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:526592-529839 FORWARD LENGTH=2718
Length=2718
Score = 525 bits (284), Expect = 8e-148
Identities = 1094/1466 (75%), Gaps = 132/1466 (9%)
Strand=Plus/Plus
Query 757 TTTTTCTTGATTAAGAATCTTGATACAGGGAAAGAGTTTATAGTGAATGAGTATGATGAA 816
||||||||||||||||| ||||| || ||||||||||| || ||||| ||||||| || |
Sbjct 763 TTTTTCTTGATTAAGAACCTTGACACTGGGAAAGAGTTCATTGTGAAGGAGTATGGTG-A 821
Query 817 G-ATGGAATGTGGAATAGGCTTAGTGATTTGCAAACAGGGAAGCAATTAACTTTGGAGGA 875
| |||||||||||||| ||||||| ||||||||||| || |||||||| || |||| ||
Sbjct 822 GAATGGAATGTGGAATCGGCTTAGCGATTTGCAAACTGGTAAGCAATTGACAATGGAAGA 881
Query 876 ATTTGAGAA-ATGTGTTGGTTATTCACCTGTGGTTAAAGAGCTTATGCGTAGAGAGAATG 934
||||||||| | |||||||||||||| |||| ||||| || |||||| | |||||||| |
Sbjct 882 ATTTGAGAAGA-GTGTTGGTTATTCATCTGTTGTTAAGGATCTTATGAGAAGAGAGAACG 940
Query 935 TGAATAGGATTAACTACGAACCGTTAATGGATCTTCGGAAGTTTAATTCGTATCTTTCGA 994
| | | | | || | || |||||| || |||| ||||| |||||| | || |
Sbjct 941 CG---A--A-T---T-CG-A-CG---ATGGATTTTAGGAAATTTAACTCGTATGTGTC-A 984
Query 995 AA-AGCGTGAG-GTTAAGTAAG-AGAAGGGGTGCTGCATTGTTGAAGAACATAAAAGG-T 1050
|| || |||| | |||||||| || || || ||||| ||||| |||||||| |||||
Sbjct 985 AAGAGTTTGAGAG-TAAGTAAGAAG-AGAGGAGCTGCTTTGTTAAAGAACAT-AAAGGAC 1041
Query 1051 GTAGCTCATTCCATGAG---TT-TACGGGTTGC-G-GATAA-AGATGTAAGCGA-TGG-A 1101
|| |||||||| ||||| || || |||| | | || || ||| | | | | ||| |
Sbjct 1042 GTTGCTCATTCTATGAGCTCTTCTA-AGGTTTCAGAGA-AAGAGAAGGATTCAACTGGTA 1099
Query 1102 --AGCACCGA-TAGTCCGAAAA--AGGGGA-AAGATC-ATAAGCATGGTAAAGCTAATGA 1154
||| | | |||||| |||| || ||| |||| | || |||| | || ||| |
Sbjct 1100 GTGGCA-CAAGTAGTCC-AAAAGTAGCGGAGAAGAACAATGAGCA--G----GCGAATCA 1151
Query 1155 GTGGGTGAAAGTTAGACCA-ACAGGGAAATCTTACAAGGAATTAAGTGCTTTGCATATGT 1213
||||||||||| || || ||||||| ||| | || || |||||||||||||||||||
Sbjct 1152 ATGGGTGAAAGTGAG-GCATTCAGGGAAGTCTCATAAAGATTTAAGTGCTTTGCATATGT 1210
Query 1214 GTCAAGAGATTCAAGCTCATGAGGGTGCGG-TTTGGACTATCAAATTTAGTCAAGATGCT 1272
|||||||||||||||||||| | || | | |||||||||| |||||||||| |||| |
Sbjct 1211 GTCAAGAGATTCAAGCTCATCAAGGAG-GTATTTGGACTATGAAATTTAGTCCAGATTCA 1269
Query 1273 CATT-ATCTAGCGAGCGGAGGAGCGGATAGAGTCATTC-ATGTATGGGAGGTTCAAGAAT 1330
|||| || |||| || | ||| | |||| | | || || |||| ||||||||||||||||
Sbjct 1270 CATTTAT-TAGCAAGTGCAGGGGAGGATTGTG-CAATCCATGTGTGGGAGGTTCAAGAAT 1327
Query 1331 GTGAACTAATGTCTATGAATGAAGGGAGTCTC-ACTCCTATTCATCCTTCACT-T-TG-T 1386
||||| | ||||| |||||||||||||| || || ||||||||||||||| | | || |
Sbjct 1328 GTGAAATCATGTCAATGAATGAAGGGAG-CTTGACACCTATTCATCCTTCAATGTCTGGT 1386
Query 1387 G--AC---TC--T-G-CTGGAAA-TGA-GAT--A-AC-TGTGGTA-GAGAAGAA-AAGGA 1429
|| | | | | |||| ||| | | | | ||| | || ||||| ||| |
Sbjct 1387 TCCACAGATAAATCGTC-GGAAGGTGATGCTGCAGAAGTGTCACAAGATAAGAAGAAG-A 1444
Query 1430 AAGG-AAAAGGCT-CT-TCGGG-AAGAC-G-AAACAATCATATTCCGGATTACGTCCATG 1483
|||| |||| || | | | | || | | |||| | ||| || ||||| ||||| |
Sbjct 1445 AAGGGAAAA--CTTCAAT-GAGTAAAAAAGGAAACCAG-ATA--CCAGATTATGTCCACG 1498
Query 1484 TTCCTGAAACCGTCTTCTCCTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATTTGG 1543
|||||||| || |||||||| || ||||| || |||||||||| | ||||| ||||
Sbjct 1499 CGCCTGAAACTGTGTTCTCCTTGTCAGATAAACCAATTTGCTCTTTCACTGGTCACTTGG 1558
Query 1544 ATGCTATTTTGGATCTG-TCATGGTC-CAAATCTCAGCTTCTT-CTTTCATCTTCCATGG 1600
||| | || |||| || || ||||| | || ||||| || ||||||||||||||||
Sbjct 1559 ATGATGTTCTGGA-CTTATCTTGGTCTCGG-TCACAGCTA-TTGCTTTCATCTTCCATGG 1615
Query 1601 ACAAAACAGT-CAGGTTATGGGATCTAGAAAC-CAAAACATGTCTCAAATTGTTTGCTCA 1658
||||||| || | |||| |||||| | ||||| |||| ||||| ||| | ||||| ||
Sbjct 1616 ACAAAACTGTGC-GGTTGTGGGATATTGAAACTCAAAGT-TGTCTAAAACTATTTGCCCA 1673
Query 1659 TAATGACTACGTGACATGTATCCAGTTTAGCCCAGTGGATGAAAATTATTTC-TTAAGTG 1717
|||||||| || || ||| | || || | ||| |||||||| |||| ||| ||| |||
Sbjct 1674 CAATGACTATGTTACTTGTGTACAATTCAATCCATTGGATGAAGATTACTTCATTA-GTG 1732
Query 1718 GTTCACTTGACGCTAAGATAAGGATATGGAGCATA-CAAGATCGACATGTTGTGGAATGG 1776
| || ||||| || ||||| | ||||||| |||| ||| | || || || || || |||
Sbjct 1733 GCTCCCTTGATGCCAAGATCCGTATATGGAACATATCAA-ACCGTCAAGTAGTTGAGTGG 1791
Query 1777 AGTGATCTTCATGAAATGGTTACTGCTGCTTGCTACACTCCAGACGGTCAGGGTGCACTT 1836
| |||||| | ||||||||||| || | ||| || ||||| || ||||||| |||| ||
Sbjct 1792 AATGATCTAAAGGAAATGGTTACCGCGGTTTGTTATACTCCTGATGGTCAGGCTGCATTT 1851
Query 1837 ATCGGTTCACATAAA-GGA-ATTTGTCGTGCTT-AC-GATACAGAAGATTGTAAGCTG-A 1891
| |||||| || || || ||| | || |||| || | | |||| ||||| ||| || |
Sbjct 1852 GTTGGTTCA-ATTAATGGGCATT-GCCG-GCTTTACAG-TGCAGAGGATTGCAAGTTGGA 1907
Query 1892 GCCAAACTAGTCAGATTGATGTTCAGAGCAATAAGAAATCGCAAGCGAAAAGGAAGATCA 1951
| |||| | ||||| ||| | |||| ||| ||||| | ||||| |||| | |||||
Sbjct 1908 AC-AAACAAACCAGATAGATCTGCAGAACAAAAAGAAGGCTCAAGCTAAAA--A-GATCA 1963
Query 1952 CTAG-TTTTCAGTTTTCCCCGGTGAATCCATCCGAAGTTCTTGTCACATCCGCTGATTCA 2010
| || |||||||||||| || | |||||||| ||||| ||||| || || |||||||||
Sbjct 1964 C-AGCTTTTCAGTTTTCGCCAATTAATCCATCAGAAGTGCTTGTAACTTCTGCTGATTCA 2022
Query 2011 CGGATTCGAATA-TTAGACGGTTCTGAAGTTATTCACAAATTCAAAGGCTTTAGAAACAC 2069
|| ||||| | || |||||| ||||| || |||| ||||||| |||||| | |||||
Sbjct 2023 CGCATTCGGGTTCTT-GACGGTACTGAACTTGTTCAAAAATTCAGAGGCTTCAAAAACAT 2081
Query 2070 GTGTAGCCAACTCTCTGCTTCCTATAGCCA--AGATGGGAAATACATAATATGTGCAAGT 2127
| |||||| | | || || || | | | ||||| || |||| | || || ||
Sbjct 2082 GAACAGCCAAATGACAGCATCTTACA-C-AGTAGATGCTAAGCACATTGTCTGCGCTAGC 2139
Query 2128 GAAGACTCTCAGGTTTACTTATGGAA 2153
|||||||| ||||||||| | |||||
Sbjct 2140 GAAGACTCACAGGTTTACGTGTGGAA 2165
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135902248587
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5