BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg345622
Length=1383
Score E
Sequences producing significant alignments: (Bits) Value
AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -rel... 769 0.0
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 741 0.0
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 736 0.0
AT5G41490.1 | Symbols: | F-box associated ubiquitination effec... 689 0.0
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 582 2e-165
AT1G48625.1 | Symbols: | pseudogene of F-box family protein | ... 444 1e-123
AT5G41494.1 | Symbols: | pseudogene of F-box family protein | ... 396 3e-109
AT4G09452.1 | Symbols: | Pseudogene of AT2G38590; F-box family... 285 8e-76
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 233 3e-60
AT2G38590.1 | Symbols: | F-box and associated interaction doma... 137 2e-31
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 117 3e-25
AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7... 60.2 5e-08
AT2G18320.1 | Symbols: | F-box associated ubiquitination effec... 60.2 5e-08
> AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -related,
similar to type 2 peroxiredoxin, putative | chr4:5821214-5822443
FORWARD LENGTH=1230
Length=1230
Score = 769 bits (416), Expect = 0.0
Identities = 1002/1265 (79%), Gaps = 120/1265 (9%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTC-TTTCGAGGCT 59
|||||||| ||||||| ||||||||||| ||||||||||||||| | || |||| |||
Sbjct 1 ATGACGACGATGATCTACAATCTTCCAAGGGATTTGATCGAGGAGA-TCATTTCTAGG-G 58
Query 60 TTCC-TGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCC- 117
|||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 59 TTCCTTTGAAATCTATGAAAGCGGTGAGATTAACTTGCAAAACTTGGAACAATTTATCCA 118
Query 118 AAA---A--G---T--G-AGATGTACATTGGTAAA-T--------CAACAAGAGAAGGAC 157
||| | | | | ||||| ||||||||||| | |||||||||| |||
Sbjct 119 AAAGTGAGGGTTTTACGAAGATGCACATTGGTAAAGTGACAACACCAACAAGAGATGGAG 178
Query 158 AGTCTATGATGATCGCGATGATGCCTCACAATCTTTATCTAATGAGCTGCGTCGTCGACG 217
|| ||||||||||| ||||||||||||||| |||| | |||||||| | |||||||||
Sbjct 179 AGACTATGATGATCATGATGATGCCTCACAAACTTTGTTTAATGAGCGGTGTCGTCGACT 238
Query 218 TTGATCCATCTATAGAGCATAAAGGTCAACTTAGTTTCCTTCACAATCAAGTTAGCATAT 277
||||||||||||||||| ||||||||||| | |||| ||||||||||||| || ||||
Sbjct 239 TTGATCCATCTATAGAGGTTAAAGGTCAAC-T--TTTCATTCACAATCAAGTGAGTATAT 295
Query 278 CTCGAGT-CTTT-CACTATGAGGGTTTAATT-TTATGCATCTTG-AA-A-GACGTTACTA 331
|| | | ||| |||| ||||||||| || |||||||||||| || | ||||||||||
Sbjct 296 CT--AATATTTTCCACTTTGAGGGTTT-GTTGTTATGCATCTTGAAAGACGACGTTACTA 352
Query 332 GGATTGTGGTTTTGAATCCGTATTTGGGCCAAACAAGGTGGATCAAACTCAGATTTTCTC 391
|| || |||||| ||||||||||| ||| || |||||||||||||| ||| ||| |||||
Sbjct 353 GGGTTTTGGTTTGGAATCCGTATTGGGGGCATACAAGGTGGATCAACCTCCGATATTCTC 412
Query 392 -A-CTGTCAACAAAGATTTGACATGTTCAGTTATGCTCTCGGTTACG-AGCATAAAGAAT 448
| || | | | ||||||| | ||| ||||||||||| || |||| || |||| ||||
Sbjct 413 AACCT-CCGA-ATGGATTTGATAGGTTTAGTTATGCTCTTGGATACGAAG-ATAAGGAAT 469
Query 449 CTTGTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATTTCTACAA-AGCACCCGAAACG 507
||||||||| ||||| ||| |||||||| |||||||||||||||| | ||||||||||
Sbjct 470 CTTGTCGTACCTTTAAGTTCCTGAGGTTTCTAGATTATTTCTACAATA-CACCCGAAAC- 527
Query 508 A-AAtttttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGAGTACTCTTGATGT 566
| ||| |||||||||||||||||| |||||||| || |||| || || |||||||||||
Sbjct 528 ACAATCTTTTTGGTATGAAATCTATGATTTTGACTCGGGTTTATAGACAACTCTTGATGT 587
Query 567 CACTCCACACTGGTTTATATC-TTGTTCAAGCGA-TAGCGTTTCTCTTAAGGGAAATACC 624
||||||||||||| | || | |||||| | | | |||||||| |||||||||| ||
Sbjct 588 CACTCCACACTGGGGTGTA-CATTGTTC-TTCCAGTGGCGTTTCTATTAAGGGAAACACT 645
Query 625 TACTGGTGTGCTAGAGAAAGGACCCCTGAAAACGGTCTCCGCGATCACATAATCTGTTTT 684
||||||||||||| |||||||| | | | |||| | |||||||| |||||||||
Sbjct 646 TACTGGTGTGCTAAAGAAAGGA--GGT-CACAGGGTCACAAAGATCACATTATCTGTTTT 702
Query 685 GATTTTACAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCCGGTTAACGTTACTGATCAT 744
|||||||||||||||||||| ||||||||||| ||||| || || | | | | | |
Sbjct 703 GATTTTACAAGAGAGAGATTCGGGCCGCTTCTCCCTCTACC-GTGCA-G---C-G--C-T 753
Query 745 GACTATGGTATTGTGACTTTATCTTGTGTTAAAGAAGAGAAGATTGCAGCCTTATTTCAG 804
| || | | ||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 754 G--TA--G-A-TGTGACTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTTCAG 807
Query 805 CACTACGCATCATTTGATTCTGAGTTTGAAATATGGATTACGACTAAGATTGAGGCCGAA 864
|| || | |||||||| || ||||||||||||||||||||||| ||||||
Sbjct 808 -----CG------TT-A-TCTGAGTTGGAGATATGGATTACGACTAAGATTGATGCCGAA 854
Query 865 ATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATACGAAG-CCTAAGAT-ATTTTTTCCAG 922
| |||||||||||||||||| || ||||| |||||| || |||||||| | | | ||
Sbjct 855 ACGGTGTCGTGGAGCAAGTTATTTAGAATTGATACG-AGACCTAAGATAAAGATAT-CAC 912
Query 923 ATACTTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGGATGTTGGTAGAGACTATGAAG 982
||| ||||||| | || |||||||||||||||||||||| ||| | | | || |||
Sbjct 913 ATAGTTTCTTCGTAGACGAAGAGAAGAAAGTCTTCATGG--GTT--TCG-G--TA-GAA- 963
Query 983 GTA-ATTGGGACTATGACTATGAA-TATCCCAAAACATTAATTTA-CATCATTGGAGAGG 1039
| || ||| |||| | || | || ||||||||| | ||| |||| | |||||||
Sbjct 964 --ACCTT--GACCCCGACTCT-AATTGTCTCAAAACATTTA-TTAGCATCGTCGGAGAGG 1017
Query 1040 CTGGGTACTTCA-AAAAATTGGATCCCGGATTACCTA-ACCAAAACCGTTGGCCACGTG- 1096
||| ||||| | ||||| || || | || || || |||| || | | ||
Sbjct 1018 ATGGATACTT-AGAAAAACTGAAT--C---TT--GTAGACGGAAACTGTAAACAATATGT 1069
Query 1097 TGTGCTCTTATGTTCCAAGTTTGGTCCAGATCAA-GAAACTTGCACGAGGCAAAAGGATA 1155
| | ||||||| |||||||||||||||| ||||| ||| || ||||| |||||| || |
Sbjct 1070 TAT-CTCTTATATTCCAAGTTTGGTCCAAATCAAGGAAGGTT-CACGATGCAAAAAGAGA 1127
Query 1156 GAACAAAGTAGTTTAGAAAAGCATCGATTTGATCAAAACATGTTGAGACTTGC-TGAAAT 1214
|||||||| |||||||||||| |||||||||||||||||||||||||||||| | || |
Sbjct 1128 AAACAAAGTGGTTTAGAAAAGCGTCGATTTGATCAAAACATGTTGAGACTTGCCTCAA-T 1186
Query 1215 TGAAA 1219
|||||
Sbjct 1187 TGAAA 1191
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 741 bits (401), Expect = 0.0
Identities = 994/1263 (79%), Gaps = 109/1263 (9%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTT 60
||| |||||| |||||| |||||||| | ||| ||||| ||||| |||||||| ||| ||
Sbjct 1 ATGGCGACAACGATCTCTAATCTTCCGAGGGAGTTGATAGAGGAGATTCTTTCTAGGGTT 60
Query 61 TCCTGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCCAAA 120
||| || | | ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 61 CCCTTGAGAGCCATGAAAGCAATGAGATTAACTTGCAAAAGTTGGAACAATTTATCTAAA 120
Query 121 AGT--GAG----AT---G-T--ACATTGGTAAA--T-CAACAAGAGAAG-GACAGTCTAT 164
||| ||| || | | ||||||||||| | |||||||||||| || || | ||
Sbjct 121 AGTGAGAGTTTTATGAAGATGCACATTGGTAAAGCTGCAACAAGAGAAGAGA-AGACCAT 179
Query 165 GATGATCGCGATGATGCCTCACAATCTTTATCTAATGAGC--TG-CGTCGTCGACGTTGA 221
|||| | ||| |||||||||||| |||| | || ||||| || ||||| || |||| |
Sbjct 180 GATGGTTGCGGTGATGCCTCACACTCTTGCTTTAGTGAGCGTTGTCGTCGACGGCGTTAA 239
Query 222 TCCATCTATAGAGCATAAAGGTCAACTTAGTTTCCTTCACAATCAAGTT-AGCATATCTC 280
|||||||| ||||| ||||||||| ||||||||||| |||| || || |||| ||
Sbjct 240 TCCATCTACAGAGCTTAAAGGTCAGTTTAGTTTCCTTGACAAGGAA-TTCTTTATATATC 298
Query 281 GAGTCTTTCACTATGAGGGTTTAATTTTATGCATCTTGAAAGACGTTACTAGGATTGTGG 340
||||| | |||||||||||||| | ||||| || |||||||||| ||||||||||||||
Sbjct 299 GAGTCATCCACTATGAGGGTTTGCTGTTATGTATTTTGAAAGACGCTACTAGGATTGTGG 358
Query 341 TTTTGAATCCGTATTTGGGCCAA-ACAAGGTGGAT-CAAACTCAGATTTTCTCACTGTCA 398
||| ||||||||||||||| ||| | ||||||||| |||| |||||| ||||||| |||
Sbjct 359 TTTGGAATCCGTATTTGGGGCAAGA-AAGGTGGATCCAAA-TCAGATATTCTCACCGTCC 416
Query 399 ACAAAGAT-TTGA-CATGTTCAGTTATGCTCTCGGTTACGAGC-ATAAAGAATCTTGTCG 455
|| | | | | || ||| |||| |||||| | || |||| | | || | |||||||||
Sbjct 417 AC-ATGGTGTAGACCAT-TTCAAATATGCTGTTGGATACG-CCGACAAGGTATCTTGTCG 473
Query 456 TAGTTTTAAATT-CTTGAGGTTTATAGATTATTTCTACAAAGCACCCG--AAACGAAAtt 512
||| ||||||| | |||||||| ||||||||||| |||||||| ||| |||| |||
Sbjct 474 TAGCGTTAAATTAC-TGAGGTTTTTAGATTATTTCCACAAAGCATCCGATAAAC--CATT 530
Query 513 tttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGAGTACTCTTGATGTCACTCC 572
||||||||||||||||||||||||||| ||| ||| ||||| ||||||||| |||||||
Sbjct 531 TTTTTGGTATGAAATCTACGATTTTGACTCTTGTTTATGGACAACTCTTGATATCACTCC 590
Query 573 ACACTGGTTTATATCTTGTTCA-AGCGATAGCGTTTCTCTTAAGGGAAATACCTACTGGT 631
||| ||| ||||||||| | | | ||| ||||| ||||||||||| || ||||||
Sbjct 591 ACATTGGGGTATATCTTGGACTTACCC-TAGAGTTTCCCTTAAGGGAAACACTTACTGGC 649
Query 632 GTGCTAGAGAAAGGACCCCTGAAAACGGTCTCCGCGATCACATAATCTGTTTTGATTTTA 691
||||||||||| || | | |||| ||| ||| |||||||||||||||||||||||||
Sbjct 650 CTGCTAGAGAAATGAACAC--AAAA-GGTTTCCAAGATCACATAATCTGTTTTGATTTTA 706
Query 692 CAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCCGGTTAACGTTACTGATCATGACTATG 751
|||| ||||||||||| |||||||||||||| || | | | | | | | || | |
Sbjct 707 CAAGTGAGAGATTTGGTCCGCTTCTACCTCTACC--T-AGGGCT-C--A--AGGA-TGTC 757
Query 752 GTATTGTGACTTTATCTTGTGTTAAAGAAGAGAAGATTGCAGCCTTATTTCAGCACTA-C 810
|| |||| ||||||||||||||||||||||||| |||||| ||| || ||||| |
Sbjct 758 --AT-GTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGTTTTACTTAAGCACCGGC 814
Query 811 -GCATCA---TT--T--GATTCTGAGTTTGAAATATGGATTACGACTAAGATTGAGGCCG 862
||| || || | || | ||||||||| ||||||||||||||||||||||| | ||
Sbjct 815 TGCACCACGATTCATACGAATATGAGTTTGAGATATGGATTACGACTAAGATTGACGTCG 874
Query 863 AAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATACGA-AGCCTAAGATATTTTTTCCA 921
|||||||||||||||||||||||||||||||||||| || | ||||||||| |||||
Sbjct 875 AAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATATGAGA-CCTAAGATAAAGCTTCCA 933
Query 922 GATACTTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGGATGTTGGTAGAGACTATGAA 981
|| ||||| | |||| |||||||||||||| ||||||| ||| | | ||
Sbjct 934 CTTAGTTTCTACGTTGACGAAGAGAAGAAAGTTTTCATGG--GTT--T------T--GA- 980
Query 982 GGTAATTGGGACTATGACTATGAATATCCCAAAACATTAATTTACATCATTGGAGAGGCT 1041
| || ||| || || | | ||||| ||| || |||||||||||||| ||
Sbjct 981 --TCAT-GGG-----GA--AT-A-T--CCCAAGTTATTTCTTAACATCATTGGAGAGACT 1026
Query 1042 GGGTACTTCAA-AAAATTGGATCCCGGATTACCT-AA--CCAAAACCGTTGGCCACGTGT 1097
|| | ||| || ||||||||||| |||| ||| | || ||| ||||| |||| ||
Sbjct 1027 GGATTCTT-AAGAAAATTGGATCTCGGAGTACATGAAGGCCA---CCGTTCGCCA--TG- 1079
Query 1098 GTGCTCTTATGTTCCAAGTTTGGTCCAGATCAAGAAACTTGCACGAGGCAAAAGGATAGA 1157
|||||||||||||||||||||||| |||||| | | |||| ||| ||||| |||| |
Sbjct 1080 ---CTCTTATGTTCCAAGTTTGGTCCAAATCAAGCATCCTGCAGGAGACAAAATGATAAA 1136
Query 1158 ACAAAGTAGTTTAGAAAAGCATCGATTTGATCAAAACATGTT-GAGACTTGCTGAAATTG 1216
|||||||||||||||| | | |||||||| |||||||| ||| ||||||||||| |||||
Sbjct 1137 ACAAAGTAGTTTAGAAGACCGTCGATTTGCTCAAAACA-GTTTGAGACTTGCTGCAATTG 1195
Query 1217 AAA 1219
|||
Sbjct 1196 AAA 1198
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 736 bits (398), Expect = 0.0
Identities = 813/1003 (81%), Gaps = 69/1003 (7%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTT 60
||| |||| ||||||||||||||||||| ||||||||| ||||| ||| |||| ||| ||
Sbjct 1 ATGGCGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAGGAGATTTTTTCTAGGGTT 60
Query 61 TCCTGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCCAAA 120
||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 61 CCCTTGACATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCTAAA 120
Query 121 AGTGAGA--T----G----T--ACATTGGTA-A--ATCAACAAGAGAAG-GACAGTCTAT 164
||||||| | | | ||||||||| | | |||||||||||| || || ||||
Sbjct 121 AGTGAGAGCTTTACGAAGGTGCACATTGGTAGAGCAGCAACAAGAGAAGAGA-AGACTAT 179
Query 165 GAT-GATCGC-GATGATGCCTCACAATCTTTATCTAATGAGC-T-G-CGTCGTCGACGTT 219
||| | ||| | ||||||||||||| ||| || ||||||| | | | ||| |||||||
Sbjct 180 GATAG-TCGATG-TGATGCCTCACAAACTTAATTTAATGAGTATTGTCATCGACGACGTT 237
Query 220 GA-TCCATCTATAGAGCATAAAGGTCAACTTAGTTTCCTTCACAATCAAGTTAGCATATC 278
| ||||||| |||| ||||||||| ||||||| |||||||| || | | | |||
Sbjct 238 -ACTCCATCTGCAGAGTTTAAAGGTCAGTTTAGTTTACTTCACAAG-AACT-ACCGTATA 294
Query 279 --TCGAGTCTTTCACTATGAGGGTTTAATT-TTATGCATCT-TGAAAGA-CGTTACTAGG 333
|| |||||| |||||||||||||| || |||||||| | ||||||| | | ||||||
Sbjct 295 AATCAAGTCTTACACTATGAGGGTTTG-TTGTTATGCAT-TATGAAAGATCCT-ACTAGG 351
Query 334 ATTGTGGTTTTGAATCCGTATTTGGGCCAAACAAGGTGGATCAAACTCAGAT-TTTCTCA 392
|||||||||| ||||||||||||||| ||||||||||||||| ||||||| | ||| |||
Sbjct 352 ATTGTGGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCCAACTCAGGTATTT-TCA 410
Query 393 CTGTCAACAAAGATTTGAC-ATGTTCAGTTATGCTCTCGGTTACGAGCATAAAGAATCTT 451
| ||| ||| || | ||| || ||||| ||||||||||| |||| | |||| |||||||
Sbjct 411 CCGTCCACATGGAATAGACCAT-TTCAGATATGCTCTCGGATACGCGGATAAGGAATCTT 469
Query 452 GTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATTTCTACAAAGCACCCGAA-ACGAAA 510
|| |||| |||||||||| |||||| |||||||||||||||||||||||||| | |||
Sbjct 470 GTAGTAGCCTTAAATTCTTAAGGTTTTTAGATTATTTCTACAAAGCACCCGAAGAGGAA- 528
Query 511 tttttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGAGTACTCTTGATGTCACT 570
||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||
Sbjct 529 TTTTTTTGGTATGAAATCTACGATTTTGACTCTGGTTTATGGACAACTCTTAATGTCACT 588
Query 571 CCACACTGGTTTATATCTT-GTTCAAGCGATAGCGTTTCTCTTAAGGGAAATACCTACTG 629
||||||||| ||| | || | | || | | ||||| ||||||||||| || |||||
Sbjct 589 CCACACTGGGGTATTTATTCGA-CTTGCCCTTGTGTTTCCCTTAAGGGAAACACTTACTG 647
Query 630 GTGTGCTAGAGAAAGGACCCCTGAAAACGGTCTCCGCGATCACATAATCTGTTTTGATTT 689
| ||||| |||||||| | | | || ||| ||| ||| | |||||| |||| |||||
Sbjct 648 GCCTGCTAAAGAAAGGAGCAC--ACAA-GGTTTCCAAGATTATATAATCCGTTTCGATTT 704
Query 690 TACAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCCGGTTAACGTTACTGATCATGACTA 749
|||||||||||||||||| || |||||| ||||||| | | || |||| ||| |
Sbjct 705 TACAAGAGAGAGATTTGGACCCCTTCTAGCTCTGCC--T-A-CG-----GATCGTGAATC 755
Query 750 TGGTATT-GTGACTTTATCTTGTGTTAAAGAAGAGAAGATTGCAGCCTTATTTCAGCACT 808
| ||| |||| ||||||||||||||||||||||||| ||||||| |||||| |||||
Sbjct 756 TTC-ATTTGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTTAAGCACC 814
Query 809 A-C-GCATCAT--TTGATTC---T--GAGTTTGAAATATGGATTACGACTAAGATTGAGG 859
| ||| ||| || || | | |||||||| |||||||||||||||||||||||||
Sbjct 815 GGCTGCACCATGATTCATACGAATATGAGTTTGAGATATGGATTACGACTAAGATTGAGG 874
Query 860 CCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATACGA-AGCCTAAGATATTTTTT 918
||||||||| |||||||||||||||||||||||||||| || | |||||||| ||
Sbjct 875 TCGAAATGGTTTCGTGGAGCAAGTTCTTGAGAATGGATATGAGA-CCTAAGATGGAGCTT 933
Query 919 CCAGATACTTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGG 961
||| |||||||| |||||| |||||||||||||| |||||||
Sbjct 934 CCACTTACTTTCTACATTGACGAAGAGAAGAAAGTTTTCATGG 976
> AT5G41490.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr5:16600445-16601608 FORWARD LENGTH=1164
Length=1164
Score = 689 bits (373), Expect = 0.0
Identities = 950/1214 (78%), Gaps = 98/1214 (8%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTT 60
||| ||||||||||| ||||||||| || ||||||||| ||||| ||| | || ||| ||
Sbjct 1 ATGGCGACAATGATCACCAATCTTCGAAGGGATTTGATAGAGGAGATTATATCTAGGGTT 60
Query 61 TCCTGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCCAAA 120
||| || ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 61 CCCTTGAGATCTATGAAAGCAGTAAGATTAACTTGCAAAAGTTGGAATAATATATCCAAA 120
Query 121 AGTGAGA---T------G-T--ACATTGGTAAATCAAC-A--AGAGAA-GGACAGTCTAT 164
||||||| | | | | |||| |||| |||| | |||||| ||| || ||||
Sbjct 121 AGTGAGATCTTCACGAAGATGCAGATTGATAAAGCAACAACTAGAGAAGGGA-AGACTAT 179
Query 165 GATGATCGCGATGATGCCTCACAATCTTTATCTAATGAGC-T-G-CGTCGTCGACGTTGA 221
|||||| || |||||||||||||||||| | |||||||| | | ||||| |||||||||
Sbjct 180 GATGATATCGGTGATGCCTCACAATCTTTCTTTAATGAGCGTCGCCGTCGACGACGTTGA 239
Query 222 TCCATCTATAGAGCATAAAGGTCAACTTAGTTTCCTTCACAATCAAGTTAGCATATC-TC 280
|||||| ||||| ||||||||| |||||||| ||| |||||||| || ||| | |
Sbjct 240 TCCATCCGTAGAGTTTAAAGGTCAGCTTAGTTTTCTTTGTAATCAAGTCAGTATA-CATA 298
Query 281 GAGTCT-TTCACTATGAGGGTTTAATT-TTATGCATCTTGAAAGACGTTACTAGGATTGT 338
||| | | || | ||||||||| || |||||| ||||||||||| ||||||| ||||
Sbjct 299 AAGT-TATCCATTGTGAGGGTTT-GTTGTTATGCTTCTTGAAAGACCATACTAGGGTTGT 356
Query 339 GGTTTTGAATCCGTATT-TGGGCCAAACAAGGTGGATCAAACTCAGATTTTCTCACTGT- 396
||||| ||||||||||| ||| |||||||||||| |||||||||||| | | ||| |
Sbjct 357 GGTTTGGAATCCGTATTCCGGG-CAAACAAGGTGGGTCAAACTCAGATATCCCCACCCTC 415
Query 397 CAA--CAAAG-ATTTGACA-T-GTTCAGTTATGCTCTCGGTTACGAGCATAAAGAATCTT 451
||| | ||| | || | | |||||| ||||| || || |||||| |||||| |||||
Sbjct 416 CAAGTCCAAGCAAATGGGATTGGTTCAGATATGCCCTTGGATACGAGGATAAAGGATCTT 475
Query 452 GTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATTTCTA-C-AAAGCACCCG-AAACGA 508
||||||| |||||||||| |||||| ||||||| || || | ||| ||| | |||| |
Sbjct 476 GTCGTAGCGTTAAATTCTTAAGGTTTTTAGATTA-TT-TACCTGAAGAACCAGAAAACCA 533
Query 509 AAtttttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGAGTACTCTTGATGTCA 568
|| | |||| ||||||||||| |||||||| |||| || ||||| |||||||||||||
Sbjct 534 AA-ATGTTTGCTATGAAATCTATGATTTTGACTCTGATTTATGGACAACTCTTGATGTCA 592
Query 569 CTCCACACTGGTTTATATCTTGTTCAAGC-GATAGCGT-TTCTCTTAAGGGAAATACCTA 626
|| |||||| || |||| || ||| ||| | | |||| || ||| |||||||| | ||
Sbjct 593 CTTCACACTCGTGGATATGTTATTCTAGCTG-TGGCGTGTT-TCTCAAGGGAAACGCTTA 650
Query 627 CTGG--TG-TGCTAGAGAAAGGACCCCTGAAAACGGTCTCCGCGATCACATAATCTGTTT 683
|||| || || || | |||| | || | || | | | |||||||||||||| |||
Sbjct 651 CTGGCCTGTTG-TA-A-AAAGTA--GCTCAGAA-GCTAACATCGATCACATAATCTATTT 704
Query 684 TGATTTTACAAGAGAGAGATTT-GGGCCGCTTCTACCTCTGCCGGTTAACGTTACTGATC 742
||| |||||||||||||| ||| ||||||| ||||||| | ||| || || ||| ||||
Sbjct 705 TGACTTTACAAGAGAGAG-TTTCGGGCCGCCTCTACCTTTACCGTTTGGCGCTACAGATC 763
Query 743 AT-GACTA-TGGTATTGTGACTTTATCTTGTGTTAAAGAAGAGAAGATTGCAGCCTTATT 800
| || || | || ||||| ||||||||||||||||||||||||| ||||||| || ||
Sbjct 764 GTGGA-TATTCATA-TGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTTTT 821
Query 801 TCAGCACTACGCATCATTTGATTCTGAGTTTGAAATATGGATTACGACTAAGATTGAGGC 860
|||||||||| |||| | | | ||| ||||| |||||| |||||||||||||||||||
Sbjct 822 TCAGCACTACATTTCATATAAATATGAATTTGAGATATGGGTTACGACTAAGATTGAGGC 881
Query 861 CGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATACGA-AGCCTAAGATATTTTTTC 919
||||||||||||||||||||| ||||||||||||||| | | ||||| ||| | |||
Sbjct 882 CGAAATGGTGTCGTGGAGCAAATTCTTGAGAATGGATTTGGGA-CCTAATATAGATATTC 940
Query 920 CAGAT-ACTTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGGATGTTGGTAGAGACTAT 978
|| || |||||||||||||| || ||||||||||| ||||||| | || | ||| | ||
Sbjct 941 CA-ATTACTTTCTTCATTGACGAGGAGAAGAAAGTTTTCATGGGT-TT--T-GAG-C-AT 993
Query 979 GAAGGTAATTGGGACTATGACTATGAATATCCCAAAACATTAATTTACATCATTGGAGAG 1038
| | | | | || | | ||||| | ||| ||| ||||||| ||||||
Sbjct 994 -A-G--A---G--A--AT-A-T--------CCCAAGAGATTTATTAACATCATCGGAGAG 1032
Query 1039 GCTGGGTACTTCAA-AAAATTGGATC-CCGGATTACCT-AA--CCAAAACCGTTGGCCAC 1093
||| || || || ||||||||||| || | ||||| || |||| || |||| ||||
Sbjct 1033 GCTAAATATTT-AAGAAAATTGGATCTCCA-AGTACCTCAAGGCCAATACTGTTGCCCAC 1090
Query 1094 GTGTGTGCTCTTATGTTCCAAGTTTGGTCCAGATCAAGAAACTTGCAC-GAGGCAAAAGG 1152
| ||||||||||||||||||||| | |||| |||||||||| ||||| ||||||||| |
Sbjct 1091 CTTTGTGCTCTTATGTTCCAAGTTCGATCCAAATCAAGAAACCTGCACTGAGGCAAAAAG 1150
Query 1153 ATAGAACAAAGTAG 1166
||||| |||| |||
Sbjct 1151 ATAGAGCAAAATAG 1164
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 582 bits (315), Expect = 2e-165
Identities = 746/939 (79%), Gaps = 89/939 (9%)
Strand=Plus/Plus
Query 10 ATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTTTCC-TGGAA 68
|||||| || ||||||||||||||||||| || ||||| ||||| ||| ||||| | ||
Sbjct 1 ATGATCACCGATCTTCCAAAGGATTTGATAGAAGAAATCCTTTCAAGGGTTTCCAT-GAC 59
Query 69 ATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCC-A-A---A-AG 122
|||||||| || ||| |||||||||||||||||||||| | ||||||| | | | ||
Sbjct 60 ATCTATGAGAGTTGTGCGATTAACTTGCAAAAGTTGGAATACTTTATCCAATAGTGAGAG 119
Query 123 ---T--G-AGATGTACATTGGT--A---A-ATCAACAAGAGAAGGACAGTCTATGATGAT 170
| | ||||| |||||||| | | |||||| ||||||||| | |||| | ||||
Sbjct 120 CTTTAAGAAGATGCACATTGGTAAAGTTACATCAACGAGAGAAGGAGAATCTAGGGTGAT 179
Query 171 CGCGATGAT-GCCTCACAATCTTTATCTAATGA--GCTG-CGTC---G-TCGACGTTGAT 222
| | |||| | | ||||||||| | | |||| |||| | || | | |||||||||
Sbjct 180 CATGTTGATAG-ATTACAATCTTTTTTTGATGAGCGCTGTCCTCATGGAT-GACGTTGAT 237
Query 223 CCATCTATAGAGCATAAAGGTCAACTTAGTT-TCCTTCA-CAATCAAGT-TAGCATATCT 279
|||||||||||| ||||||| ||||||||| | ||| | || ||||| || ||||||
Sbjct 238 CCATCTATAGAGTTTAAAGGTAAACTTAGTTGT-CTTAAGGAA-CAAGTCAAG-ATATCT 294
Query 280 CGAGTCTTTCACTATGAGGGTTTAATT-TTATGCATCTTGAAAGACGTTACTAGGATTGT 338
| ||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct 295 CAAGTCTTTCACTGTGAGGGTTT-ATTGTTATGCATCTTGAAAGACGATACTAGGATTGT 353
Query 339 GGTTTTGAATCCGTATTTGGGC--CAAACAAGGTGGATCA-AACTCAGATTTTCTCACTG 395
|||| ||||||||| | ||| ||||||||||||||| | || |||| ||||||| |
Sbjct 354 TGTTTGGAATCCGTA--TAGGCAGGAAACAAGGTGGATCATACCT-AGATATTCTCACCG 410
Query 396 T-CA-ACAAAGATTTG-AC-ATGTTCAGTTATGCTCTCGGTTACGAGCATAA-AGAATCT 450
| || || | | || || || |||| |||||||| || |||||| |||| | |||||
Sbjct 411 TCCATACGTA-A--TGAACAAT-ATCAGATATGCTCTTGGATACGAGAATAATA-AATCT 465
Query 451 TGTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATTTCTACAAAGCACCCGAAACG-AA 509
||||||| ||||||| ||||||||||||||||||| || | || |||||| | |
Sbjct 466 GGTCGTAGCCTTAAATTATTGAGGTTTATAGATTATTGCT----A-CA-CCGAAAAGCAC 519
Query 510 AtttttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGAGTACTCTTGATGTCAC 569
| ||| |||| ||||||||||||||||||| |||| || ||||| ||||||||||||||
Sbjct 520 A-TTTGTTGGCATGAAATCTACGATTTTGACTCTGATTTATGGACAACTCTTGATGTCAC 578
Query 570 TCCACACTGGT-T-TA-TATC---TT-GT-TCAAG-CGATA-GCGTTTCTCT-TAAGGGA 618
|||||| |||| | || | || || || | | | | | |||| ||||| |||||
Sbjct 579 TCCACATTGGTATATATTGTCTAATTGGTCTTGTGTCCA-AGGCGTCTCTCTCAAAGGG- 636
Query 619 AATACCTACTGGTGTGCTAGAGAAAGGACCCCTGAAAACGGTCTCCGCGATCACATAATC 678
|| || |||||||||||||||| || || || | | ||| | | |||| ||||||
Sbjct 637 AACACTTACTGGTGTGCTAGAG-AA-GAAAACT-CAGATGGT-T--ACAATCATATAATC 690
Query 679 TGTTTTGATTTTACAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCCGGTTAACGTTACT 738
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |
Sbjct 691 TGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCTACCGGTTAACGTTA-T 749
Query 739 -GATCATGACTATGG-TATTGTGACTTTATCTTGTGTTAAAGAAGAGAAGATTGCAGCCT 796
||| |||| |||| ||| ||||||| ||||||||||| ||||| ||||||||| || |
Sbjct 750 AGATAATGAATATGAATAT-GTGACTTCATCTTGTGTTAGAGAAGGGAAGATTGCGGCTT 808
Query 797 TATTTCAGCACTACGCAT-CATTTG-ATTCTGAGTTTGAAATATGGATTACGACTAAGAT 854
||||||||||| ||| || ||| | || |||| |||| ||||||||||||||||||||
Sbjct 809 TATTTCAGCACAACG-ATTCATATCCATA-TGAGCTTGAGATATGGATTACGACTAAGAT 866
Query 855 TGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAAT 893
|||||| |||||||||||||||| |||||||||||||||
Sbjct 867 TGAGGCGGAAATGGTGTCGTGGAACAAGTTCTTGAGAAT 905
Score = 132 bits (71), Expect = 1e-29
Identities = 93/103 (90%), Gaps = 4/103 (4%)
Strand=Plus/Plus
Query 1095 TGTGTGCTCTTATGTTCCAAGTTTGGTCCAGA-TCAAGAAACTTGCACGAGGCAAAAGGA 1153
||||||||||||||||||||||||||||| || | ||||||| ||||| |||||||||||
Sbjct 1125 TGTGTGCTCTTATGTTCCAAGTTTGGTCC-GAATTAAGAAACCTGCACAAGGCAAAAGGA 1183
Query 1154 TA-GAACAAAGTAGTTTAGAAAAGCATCGATTTGATCAAAACA 1195
| || ||||| ||||||||||||| |||||||||||||||||
Sbjct 1184 AAAGA-CAAAGCAGTTTAGAAAAGCTTCGATTTGATCAAAACA 1225
> AT1G48625.1 | Symbols: | pseudogene of F-box family protein
| chr1:17979561-17980815 FORWARD LENGTH=1255
Length=1255
Score = 444 bits (240), Expect = 1e-123
Identities = 752/981 (77%), Gaps = 107/981 (11%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTT-TCGAGGCT 59
||| |||| |||||||| |||||||||| ||||||||| || || ||| || || ||| |
Sbjct 1 ATGGCGACGATGATCTCTAATCTTCCAAGGGATTTGATGGAAGAGATT-TTGTCTAGGGT 59
Query 60 TTCCTGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACA-ATT-T--AT 115
| ||| |||||||||| ||||||| ||||||||||||||| |||| ||| || | ||
Sbjct 60 TCCCTTGAAATCTATGCGAGCAGTGCGATTAACTTGCAAAAATTGGCACACTTTATCCAT 119
Query 116 --CC--AA---A-AG--T---G-AGATGTACATTGGTAAATCAACAAGAG----AAG-G- 155
|| || | || | | ||||||||||| ||||| ||||||||| ||| |
Sbjct 120 AACCATAAGTGAGAGTTTAGCGAAGATGTACATTAGTAAAACAACAAGAGAATCAAGAGA 179
Query 156 A---CAGTCTATGATGATCGCGATGATGCCTCACAATCTTTATCTAATGAG-CTGCGTCG 211
| |||||| ||| ||| || ||||| | |||| |||| | ||| ||| || |||||
Sbjct 180 AGGGGAGTCTACGATAATCACGTTGATGAATTACAAACTTTGTTTAACGAGTCT-CGTCG 238
Query 212 TCGACGTTGATCCATCTATAGAGCATAAAGGT---C-AACTTAG-TTT--CCTTCA-CAA 263
|||||||||| |||| ||||||||| |||||| | ||||| | ||| ||| | | |
Sbjct 239 TCGACGTTGACCCATATATAGAGCACAAAGGTAAACTAACTT-GCTTTAATCTTGAGC-A 296
Query 264 TCAAGT-TAGCATATCTCGAGTCTTTCACTATGAGGGTTTAA-TTTTATGCATCTTGAAA 321
|||||| || ||||||| ||||||| ||||||||||||||| |||||||| | ||||||
Sbjct 297 TCAAGTCAAG-ATATCTCAAGTCTTTTACTATGAGGGTTTAATTTTTATGCGTATTGAAA 355
Query 322 GACG-------T--TACTAGGATTGTGGTTTTGAATCCGTATTTGGGCCAAACAAGGTGG 372
|||| | ||||||| ||||||||| ||||||||||| ||| ||||||||| |
Sbjct 356 GACGATACAATTACTACTAGGCTTGTGGTTTGGAATCCGTATTGGGGGCAAACAAGGCAG 415
Query 373 ATC-AAACTCAGATTTTCTCA-C-TG---TCAAC--AA-AGAT--T-TG-ACATGTTCAG 419
||| |||| | ||| |||||| | | || | || ||| | | |||||||||
Sbjct 416 ATCAAAAC-CCGATATTCTCACCACGCATTCTCCGGAAGGGATAGTACGTACATGTTCAA 474
Query 420 TTA-TGCTCTCGGTTACGAGCATAAAGAA-TCTTGTCGTAGTTTTAAATTCTTGAGGTTT 477
||| | ||||||| |||||| || ||||| || ||||| || ||||| |||||||||
Sbjct 475 TTACT-CTCTCGGATACGAGAAT-AAGAATTCATGTCGCAGCCACAAATTATTGAGGTTT 532
Query 478 ATAGATTAT--TT-CTA-CAAAGCACCCGAAACGAAAtttttttGGTATGAAATCTACGA 533
||||||||| || | | || || | || |||||||||||||||||||||||||
Sbjct 533 ATAGATTATCATTGGAATTATCGCGGCCTACAC-CAATTTTTTTGGTATGAAATCTACGA 591
Query 534 TTTTGATTCTGG-TTCATGGAGTACTCTTGATGTCACTCCACACTGGTTTATA-TC-TTG 590
|||||| || || || ||||| |||||||||||||||||||||||||||||| | ||
Sbjct 592 TTTTGACTC-GGATTTATGGACAACTCTTGATGTCACTCCACACTGGTTTATAGTTATT- 649
Query 591 T-TCAAGCGATAGCGTTTCTCTTAAGGGAAATACCTACTGGTGTGCTAGAGAA-AGGACC 648
| |||| | | | ||||| || |||||||| || |||||||||||||| ||| |||| |
Sbjct 650 TCTCAAA-G-TGGTGTTTCCCTCAAGGGAAACACATACTGGTGTGCTAG-GAAGAGGAGC 706
Query 649 CCTGAAAACGGTC-TCCGCGATCACATAATCTGTTTTGATTTTACAAGAGAGAGATTTGG 707
| |||| | |||||||||| || |||||||||||||| ||||||||||||||
Sbjct 707 G--G----CGGTTATA-GCGATCACATTATTTGTTTTGATTTTACTAGAGAGAGATTTGG 759
Query 708 GCCGCTTCTACCTCTGCCGGTTAACGTTACTGATCATGA-CTATGGTAT-TGTGACTTTA 765
|||||| | ||| ||||| ||| | ||| ||||| | | | || || ||||| ||||
Sbjct 760 ACCGCTTTTGCCTTTGCCGTTTAGCTTTATTGATCGTCATC-ATTC-ATGTGTGATTTTA 817
Query 766 TCTTGTGTTAAAGAAGAGAAGATTGCAGCCTTATTTCAGCACTACG-C-A-T-C-ATTTG 820
|||||||||| ||||||||| |||||| ||||||||| || | | | | | | ||
Sbjct 818 TCTTGTGTTAGTGAAGAGAAGCTTGCAGTTTTATTTCAGTACAAGGACCACTACTATAAA 877
Query 821 ATTCTGAGTTTGAAATATGGATTAC-GACTAAGATTGAGGCCGAAATGGTGTCGTGGAGC 879
| | | |||| |||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct 878 AATGT-AGTT-GAAATATGGATTACAG-CTAAGCTTGAGGCCGAAATGGTGTCGTGGAGC 934
Query 880 AAGTTCTTGAGAATGGATACG 900
|||||||||||||| |||||
Sbjct 935 AAGTTCTTGAGAATAAATACG 955
> AT5G41494.1 | Symbols: | pseudogene of F-box family protein
| chr5:16602589-16603438 FORWARD LENGTH=850
Length=850
Score = 396 bits (214), Expect = 3e-109
Identities = 440/545 (81%), Gaps = 32/545 (6%)
Strand=Plus/Plus
Query 372 GATCAAACTCAGATTTTCTCACTG-TC-AACAAAGATTTGACATGTTCAGTTATGCTCTC 429
|||||||| ||||| |||| || | | || |||| ||||||||||||||||||||
Sbjct 3 GATCAAACCCAGATATTCTTACCGCCCTTACCAAGA--GGACATGTTCAGTTATGCTCTT 60
Query 430 GGTTACGAGCATAAAG-AATCTTGTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATTT 488
|| || ||| || | | |||||||||||| |||| |||||||||||| |||| |||||
Sbjct 61 GGATATGAGAAT-AGGAAATCTTGTCGTACCGTTAATTTCTTGAGGTTTGTAGACTATTT 119
Query 489 -CTACAAAGCACCCGAAACGA-AAt-ttttttGGTATGAAATCTACGATTTTGA-TTCTG 544
|| ||| | || | ||| || | | ||||| |||| ||||||||||||||||| || |
Sbjct 120 ACTTCAACG-ACTC-AAA-GAGAGTGTTTTTGGGTACGAAATCTACGATTTTGACTT-AG 175
Query 545 GTTCATGGAGTACTCTTGATGTCACTCCACACTGG--T-TTATATCTTGTTCAAGCGATA 601
|||||||| ||||||||||||| |||||||||| | | |||||||| | | | |
Sbjct 176 ATTCATGGACAACTCTTGATGTCAGTCCACACTGGCATATAATATCTTG-T-GA-CCTTG 232
Query 602 GCGTTTCTCTTAAGGGAAATACCTACTGGTGTGCTAGAGAAAGGACCCCT-GAA-AACGG 659
|| || |||||||| |||| || |||||| ||||||||||| || | ||| ||
Sbjct 233 GCATTACTCTTAAGAGAAACACTTACTGGCATGCTAGAGAAATGA-ATTTAGAAGAA-AA 290
Query 660 TCTCCG-CGATCACATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGGCCGCTTCTAC 718
| | || |||||||||||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 291 TAT-CGTCGATCACATAATATGTTTTGATTTTACAAGAGAGAGATTTAGACCGCTTCTGC 349
Query 719 CTCTGCCGGTTAACGTTACTGATCATGACTATG-GTATTGTGACTTTATCTTGTGTTAAA 777
|||||||||||| |||| | |||||| |||| |||| ||||||||||| |||||| |
Sbjct 350 CTCTGCCGGTTAGCGTTGGGGTTCATGATTATGAATATT-TGACTTTATCTCGTGTTAGA 408
Query 778 GAAGAGAAGATTGCAGCCTTATTTCAGCACTA-CGCATC-ATTTGATTCTGAGTTTGAAA 835
||||||||| |||| || |||||||||||| | || ||| | | | | |||| ||||||
Sbjct 409 GAAGAGAAGCTTGCCGCTTTATTTCAGCAC-ACCGAATCAAATCCA-TATGAGCTTGAAA 466
Query 836 TATGGATTACGACTAAGATTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGG 895
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 467 TATGGATTACAACTAAGATTGAGGCTGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGG 526
Query 896 ATACG 900
|||||
Sbjct 527 ATACG 531
Score = 163 bits (88), Expect = 4e-39
Identities = 162/196 (83%), Gaps = 12/196 (6%)
Strand=Plus/Plus
Query 1021 ATTTA-CATCATTGGAGAGGCTGGGTACTTCAA-AAAATTGGATCCCGGATTA--C-CTA 1075
||||| ||| |||||||||||||| ||||| || ||| || ||| ||| || | | |
Sbjct 635 ATTTAGCATTATTGGAGAGGCTGGATACTT-AATAAATTTAGATATTGGAGTACTCACAA 693
Query 1076 ACCAAAACCGTTGGCCACGTGTGTGCTCTTATGTTCCAAGTTTGGTCCAGATCAAGAAAC 1135
|||||| || ||| || |||||||||||||||||||||||||||||| ||||||||||
Sbjct 694 ACCAAATGTGTCGGCTACATGTGTGCTCTTATGTTCCAAGTTTGGTCCAAATCAAGAAAC 753
Query 1136 TTGCACGAGGCAAAAGGAT-AGA-ACAAAGTAGTTTAGAAAAGC-ATCGATTTG-ATCAA 1191
||||| | |||||||||| | | |||||| ||||||||||||| | ||||||| | ||
Sbjct 754 CTGCACTACGCAAAAGGATCAAAGACAAAGCAGTTTAGAAAAGCCA-CGATTTGCA-CAG 811
Query 1192 AACATGTTGAGACTTG 1207
||||||||||||||||
Sbjct 812 AACATGTTGAGACTTG 827
> AT4G09452.1 | Symbols: | Pseudogene of AT2G38590; F-box family
protein | chr4:5985822-5986654 FORWARD LENGTH=833
Length=833
Score = 285 bits (154), Expect = 8e-76
Identities = 349/437 (80%), Gaps = 38/437 (9%)
Strand=Plus/Plus
Query 469 TTGAGGTTTATAGATTATTTCTACAA-AGCACCCGAAACGAAAtttttttGGTATGAAAT 527
||||||||| || ||||||||||||| | |||||||||| | ||||||||||||||||
Sbjct 169 TTGAGGTTTTTATATTATTTCTACAATA-CACCCGAAAC-ACGGTTTTTTGGTATGAAAT 226
Query 528 CTACGATTTTGATTCTGGTTCA-TGGAGTACTCTTGATGTCACTCCACACTGGTTTATAT 586
||| ||| || | || || | | |||| ||||||||||||| ||||| ||| |||||
Sbjct 227 CTATGATGTTAACTC-GGGTGATTGGACAACTCTTGATGTCATTCCACGTTGGCGTATAT 285
Query 587 CTTGTTCAAGCGATAGCGTTTCTCTTAAGGGAAATACCTACTGGTGTGCT-AGAGAAAGG 645
|||||| | ||||||||||||||||||||||| || ||||||||| | | |||||
Sbjct 286 ATTGTTCTTCCCCTAGCGTTTCTCTTAAGGGAAATAGTTATTGGTGTGCTAATA-AAAGG 344
Query 646 A-CCCCTGAAAACGGTCTCCGCG-ATCACATAATCTGTTTTGATTTTACAAGAGAGAGAT 703
| | || | || ||| | | |||||||||||| |||||||||||||||||||||||
Sbjct 345 AGCTCC-G--AA-GGT-AGCAAGAATCACATAATCTATTTTGATTTTACAAGAGAGAGAT 399
Query 704 TTGGGCCGCTTCTACCTCTGCCGGTTAACG-T-TA-CTGAT--C-ATGACT-ATGGTATT 756
||||||||||||| ||||| || || ||| | || || || | || ||| || | ||
Sbjct 400 TTGGGCCGCTTCTGCCTCTACCAATTCACGTTGTAGCTAATGGCTAT-ACTAAT-AT-TT 456
Query 757 GTGACTTTATCTTGTGTTAAAGAAGAGAAGA-TTGCAGCCTTATTTCAGCAC--T-A-CG 811
||||||||||||||||||||||||||||| | |||| | |||||||||||| | | ||
Sbjct 457 GTGACTTTATCTTGTGTTAAAGAAGAGAA-ACTTGCGGTTTTATTTCAGCACCGTGAACG 515
Query 812 CAT-CATTTGATTCTGAGT-TTGAAATATGGATTACGACTAAGATTGAGGCCGAAATGGT 869
|| ||| ||| || | |||| |||| ||||||||||||||||||||||||||||||
Sbjct 516 -ATACATA-GAT---GA-TCTTGAGATATAGATTACGACTAAGATTGAGGCCGAAATGGT 569
Query 870 GTCGTGGAGCAAGTTCT 886
|| | |||||||||||
Sbjct 570 GTTGAAGAGCAAGTTCT 586
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 233 bits (126), Expect = 3e-60
Identities = 702/962 (73%), Gaps = 112/962 (12%)
Strand=Plus/Plus
Query 3 GACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTTTC 62
|||||| | ||| || |||||||||| ||||||| | ||||||||| | || | | |||
Sbjct 465 GACGACGACGATGTCAAATCTTCCAACGGATTTGTTAGAGGAAATTATCTCTA-GAGTTC 523
Query 63 CT-GGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAAC--AAT-TT----A 114
|| |||||| ||||| ||||||| |||||||||||||||| |||||| || || |
Sbjct 524 CTCGGAAATATATGAGAGCAGTGCGATTAACTTGCAAAAGGTGGAACGGTATGTTCAAAA 583
Query 115 TCCAAAAG---T--G-AGATGTACATTGGTAAATCAACAAG-AG----AA-GG-AC--AG 159
|| | || | | ||||| ||||||| ||| || ||| || || || || ||
Sbjct 584 GCC-AGAGCTTTACGAAGATGCACATTGGCAAA-GAAGAAGCAGCAACAAGGGAACTAAG 641
Query 160 TC-TA-T--GATGATCGCGATGATGCCTCACAATCTTTATCTAATGAGC--TGCGTCGTC 213
| | | |||||| | ||||||| | ||||| ||||| ||||| || ||| |||
Sbjct 642 GCAGACTCGGATGATAGTGATGATGGATTACAATGTTTATTTAATGGGCATTGC--AGTC 699
Query 214 GACGTTGA-TCCATCTATAGAGCA-TAAAGGTCAACTTAGTTTCCT--TC-A--CA-ATC 265
| | | |||||| |||||| | | |||| |||||| || ||| | | || | |
Sbjct 700 AATG-AAATTCCATCCATAGAG-ACTCTAGGTAAACTTACTTGCCTAGACGATTCAGAAC 757
Query 266 AAGT-TAGCATATCTCGAGTCTTTCACTATGAGGGTTTAATT-TTATGCATCTTGAAAGA 323
| || || ||||||| ||||||| | ||||||||| ||| |||||||||||||||||
Sbjct 758 AGGTCAAG-ATATCTCAAGTCTTTTGTTGTGAGGGTTT-ATTGTTATGCATCTTGAAAGA 815
Query 324 CG-T--TACTAGGATTGTGGTTTTGAATCCGTATTTGGGCCAAACAAGGTGGAT-CAAAC 379
| | ||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct 816 TGATGATACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAAC 875
Query 380 TCAGATT--TTCTCACTGTCAACA-AAGATTTGACATGTTCAGTTATGCTCTCGGTTAC- 435
||||| || | ||| | | || | || | | || || |||||||| |||
Sbjct 876 -AAGATTGATT-T-GCTG-CGTTAGTGGA-TGGA-A-G--AAG-TACGCTCTCGGATACG 925
Query 436 G----AGCA-T--AAAGA-ATCTTGTCGTAGTTTTAAATTCTTGAGGTTTATAGATTATT 487
| | | | ||| | |||||||||||| ||| |||||||| ||| |||| |||
Sbjct 926 GAAATAATAGTGAAAACAGATCTTGTCGTAGCCCCAAAATCTTGAGGGTTACAGATAATT 985
Query 488 TCTACA-AAGCACCCG-AAACGAAAtttttttGGTATGAAATCTACGATTTTGATTCTGG 545
|| ||| || || |||| | | | | |||||||||||| |||||||||||||
Sbjct 986 TCAACATTTTCA-GCGAAAAC-ATACCTCTCCAGTATGAAATCTATGATTTTGATTCTGA 1043
Query 546 T-TCATGGAGTACTCTTGATGTCACTCCACACTGGTTTATATCTTGT-TCAAGCGATAGC 603
| | ||||| |||||||||||| ||||||||||||||||| ||| | || || | ||
Sbjct 1044 TGT-ATGGACTACTCTTGATGTGTCTCCACACTGGTTTATA--ATGTCTGAA-CG-TGGC 1098
Query 604 GTTTCTCTTAAGGGAAATACCTACTGGTGTGCTAGAGAAAGGACCCCTGAAAACGGTCTC 663
||||||| |||||||| || |||||| | |||| |||| || | | | | |||| ||
Sbjct 1099 CTTTCTCTCAAGGGAAACACTTACTGGGGCGCTAAAGAACGG--CAC-GCATACGG-ATC 1154
Query 664 C-GCGATCACATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGGCCGCTTCTACCTCT 722
| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1155 CATTGATCATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTCTACCTCT 1214
Query 723 GCCGGTTAACGTTACT-GATCATG-ACTATGGTATTGTGACTTTATCTT-GTGTTAAAGA 779
||| ||| || || | || || | | | ||| | | |||||| | |||| |||
Sbjct 1215 GCCATTTA--GTG-CTTGGGG-TGCAC-A-G-T-TTGCGTCACTATCTTCG-GTTAGAGA 1265
Query 780 AGAGAAGATTGCAGCCTTATTTCAGCACTAC-GCATCATTTGATTCTGAGTTTGAAATAT 838
||| || || | || ||||||||| | | | | | ||| | | || |||| |||
Sbjct 1266 AGATAAAATCACTGCTTTATTTCAGAATTGCCG-AGCATAT-A-----AGCTTGAGCTAT 1318
Query 839 GGATTACGACTAAGATTGAGGCCGA-AATGGTGTCGTGGAGCAAGTTCTTGAGAATGGAT 897
||||||||||||||||||| | | | |||| | |||||||||| ||||| | |||||||
Sbjct 1319 GGATTACGACTAAGATTGATGTCAACAATGC-GACGTGGAGCAAATTCTTCACAATGGAT 1377
Query 898 AC 899
||
Sbjct 1378 AC 1379
> AT2G38590.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:16142897-16144184 FORWARD LENGTH=1288
Length=1288
Score = 137 bits (74), Expect = 2e-31
Identities = 198/253 (78%), Gaps = 27/253 (11%)
Strand=Plus/Plus
Query 1 ATGACGACAATGATCTCCAATCTTCCAAAGGATTTGATCGAGGAAATTCTTTCGAGGCTT 60
|||||||| |||||||| |||||||||| || |||||| ||||| ||| ||| ||| |
Sbjct 1 ATGACGACGATGATCTCTAATCTTCCAAGGGTTTTGATAGAGGAGATTTTTTTTAGG-GT 59
Query 61 TCC-TGGAAATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCCAA 119
||| | ||||||| ||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct 60 TCCTTTGAAATCTTTGAGAGCAGTGAGATTAACTTGCAAAAGTTGGAACACTCTATCCAA 119
Query 120 AAGT-G-AG----A-----T-GTACATTGGTAAAT---CAACAAGAGAAG-GACAGTCTA 163
|||| | || | | ||||||| ||||| |||||||||||| | |||| |
Sbjct 120 AAGTAGGAGCTTTAGGAAGTTGTACATTAGTAAAAGAGCAACAAGAGAAGAGG-AGTCCA 178
Query 164 TGATGATCGCGATGATGCCTCACAATCTTTAT-CTAATGAGC-T-GC-GT---CGTCGAC 216
|||||||||| |||||| | | |||||||| | |||||| | | || || ||||
Sbjct 179 TGATGATCGCTATGATGAATTTCGATCTTTATTC-AATGAGGGTCGTAGTTGACGACGAC 237
Query 217 GTTGATCCATCTA 229
|||||||||||||
Sbjct 238 GTTGATCCATCTA 250
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 117 bits (63), Expect = 3e-25
Identities = 303/409 (74%), Gaps = 55/409 (13%)
Strand=Plus/Plus
Query 513 tttttGGTATGAAATCTACGATTTTGATTCTGGTTCATGGA-GTACTCTTGATGTCACTC 571
||||||||||||||||||||||||||| |||| || |||| | |||||||| || ||||
Sbjct 531 TTTTTGGTATGAAATCTACGATTTTGACTCTGATTTGTGGACG-ACTCTTGACGTTACTC 589
Query 572 CACACTGGTTTAT--A------T---C----TTGTT-CAAGCGATAGCGTTTCTCTTAAG 615
|||| |||||||| | | | ||||| || || | | ||| |||| |||
Sbjct 590 CACAATGGTTTATAAATTTCCCTCCCCGTGGTTGTTATAACCG-TGGTGTTACTCTCAAG 648
Query 616 GGAAATACCTACTGGTGTGCTA-GAGAAAGGACCCCTGA-A--AA-CGGTCT-CCG--C- 666
||||| || ||||||||||||| || ||||| | | | || ||| | | |
Sbjct 649 GGAAACACTTACTGGTGTGCTATAAG-AAGGAAGTCAAACACTAATTGGTTTGTTGATCT 707
Query 667 -GATCACATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCC 725
||||||||||||||||||||||||||||| ||||||||||| |||||| | ||| ||||
Sbjct 708 TGATCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCC 767
Query 726 GGTTAACGTTACTGATCATGAC-TATGGTA---TTGTGACTTTATCTTGTGTTAAAGAAG 781
| || |||| ||| || || | || | |||||||| |||||||||||| |||||
Sbjct 768 GTTT---GTTA--GAT-AT-ACGTCCGGAAGCCTTGTGACTCTATCTTGTGTTAGAGAAG 820
Query 782 AGAAGATTGCAGCCTTATTTCAGCACTACGCATCATTTGATTCTGAGTTTGAAATATGGA 841
||||| |||| | || ||| | | || | || | | ||| || || ||||||
Sbjct 821 AGAAGCTTGCGGTTTTGTTTT-GTA--AC--A--AT--GCTACTG--TT-GAGGTATGGA 868
Query 842 TTACGACTAAGATTGAGGCCGA-AATGGTGTCGTGGAGCAAGTTCTTGA 889
||||||||||||||||| | || || | | |||||||||||||||||||
Sbjct 869 TTACGACTAAGATTGAGACTGACAA-GATTTCGTGGAGCAAGTTCTTGA 916
> AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7238999
REVERSE LENGTH=1089
Length=1089
Score = 60.2 bits (32), Expect = 5e-08
Identities = 42/47 (89%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 679 TGTTTTGATTTTACAAGAGAGAGATTTGGGCCGCTTCTACCTCTGCC 725
||||||||||||||||||||||||||||| | | ||| ||||||||
Sbjct 658 TGTTTTGATTTTACAAGAGAGAGATTTGGAACACCTCTGCCTCTGCC 704
> AT2G18320.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:7956220-7957531 FORWARD LENGTH=321
Length=321
Score = 60.2 bits (32), Expect = 5e-08
Identities = 34/35 (97%), Gaps = 0/35 (0%)
Strand=Plus/Plus
Query 927 TTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGG 961
||||||||||||||||||||||||||||||| |||
Sbjct 147 TTTCTTCATTGATGAAGAGAAGAAAGTCTTCGTGG 181
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68122139565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5