BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg345624
Length=2085
Score E
Sequences producing significant alignments: (Bits) Value
AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -rel... 728 0.0
AT5G41490.1 | Symbols: | F-box associated ubiquitination effec... 704 0.0
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 680 0.0
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 658 0.0
AT2G38590.1 | Symbols: | F-box and associated interaction doma... 553 3e-156
AT5G41494.1 | Symbols: | pseudogene of F-box family protein | ... 459 7e-128
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 433 4e-120
AT1G48625.1 | Symbols: | pseudogene of F-box family protein | ... 355 9e-97
AT4G09452.1 | Symbols: | Pseudogene of AT2G38590; F-box family... 346 5e-94
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 115 2e-24
AT2G18320.1 | Symbols: | F-box associated ubiquitination effec... 60.2 8e-08
> AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -related,
similar to type 2 peroxiredoxin, putative | chr4:5821214-5822443
FORWARD LENGTH=1230
Length=1230
Score = 728 bits (394), Expect = 0.0
Identities = 865/1080 (80%), Gaps = 82/1080 (8%)
Strand=Plus/Plus
Query 122 GTAAAGTAACAACACCAACAAGAGAAGGGGAGACTATGATGATCTTCAGGATGATGCCTG 181
||||||| ||||||||||||||||| || ||||||||||||| ||| ||||||||||
Sbjct 149 GTAAAGTGACAACACCAACAAGAGATGGAGAGACTATGATGA---TCATGATGATGCCTC 205
Query 182 ACAGTTTTTGTTTAATGAGCGGCATCGTCGA-TGTTGATCCATCTATAGAGCG-TAAAGG 239
||| |||||||||||||||| ||||||| | ||||||||||||||||| | ||||||
Sbjct 206 ACAAACTTTGTTTAATGAGCGGTGTCGTCGACT-TTGATCCATCTATAGAG-GTTAAAGG 263
Query 240 TCAACTTAGTTTCCTTTAC-A--AAGTCAGTGTATCTAGA-ATTTACCACTATGAGGGTT 295
||||| | |||| || || | |||| ||| |||||| | |||| ||||| ||||||||
Sbjct 264 TCAAC-T--TTTCATTCACAATCAAGTGAGTATATCTA-ATATTTTCCACTTTGAGGGTT 319
Query 296 TAATT-TTATGCAAATTG-AA-A-GACGTTAATAGGGTTATGGTTTGGAATCCCTATTTG 351
| || ||||||| ||| || | ||||||| ||||||| ||||||||||||| |||| |
Sbjct 320 T-GTTGTTATGCATCTTGAAAGACGACGTTACTAGGGTTTTGGTTTGGAATCCGTATTGG 378
Query 352 GGGCAAACAAGGTGGATCAACCTCAGGTATTCTC-ACCTCATAAACGGATTCAACAGGTA 410
||||| |||||||||||||||||| | ||||||| ||||| || ||||| | ||||
Sbjct 379 GGGCATACAAGGTGGATCAACCTCCGATATTCTCAACCTC-CGAATGGATTTGATAGGTT 437
Query 411 CAGTTATGCTCTCGGATACGAGGATAAGGAATCTTGCCGTAGCGTTAAATTGTTGAGGTT 470
||||||||||| |||||||| |||||||||||||| |||| | |||| || |||||||
Sbjct 438 TAGTTATGCTCTTGGATACGAAGATAAGGAATCTTGTCGTACCTTTAAGTTCCTGAGGTT 497
Query 471 TTTAGATTATTTCTTCCATGCACCCGAAACACAAtttttttGGTATGAAATCTACGATTT 530
| |||||||||||| | || ||||||||||||||| |||||||||||||||||| |||||
Sbjct 498 TCTAGATTATTTCTACAATACACCCGAAACACAATCTTTTTGGTATGAAATCTATGATTT 557
Query 531 TGATTCTGGTTTATGGAAAACCCTTGATGTCACTCCAAACTGGGGTATATATTGTTCAAG 590
||| || ||||||| || ||| ||||||||||||||| |||||||| || |||||||
Sbjct 558 TGACTCGGGTTTATAGACAACTCTTGATGTCACTCCACACTGGGGTGTACATTGTTC-TT 616
Query 591 CC-CTAGCGTTTCTCTTAAGGGTAACACTTACTGGTGTGCTAGTA-AAAGGAGCTCAGAA 648
|| | |||||||| ||||||| ||||||||||||||||||| | ||||||| ||| |
Sbjct 617 CCAGTGGCGTTTCTATTAAGGGAAACACTTACTGGTGTGCTA-AAGAAAGGAGGTCACAG 675
Query 649 GGTTGTATGGATCATATAATATGTTTTGATTTTACAAAAGAGAGGTTTGGGCCGCTTCTA 708
||| | ||||| || || |||||||||||||||| |||||| || |||||||||||
Sbjct 676 GGTCACAAAGATCACATTATCTGTTTTGATTTTACAAGAGAGAGATTCGGGCCGCTTCTC 735
Query 709 CCTCTGCCGTCTAGCGTTAGGGATCGTAAATATATATATGTGAATTTATCTTGTGTTAAA 768
||||| ||| | || | | || | || |||||| ||||||||||||||||
Sbjct 736 CCTCTACCG--T-GC---A--G--CG-----CTGTAGATGTGACTTTATCTTGTGTTAAA 780
Query 769 GAAGAGAAGCTTGCAGCTTTATTCCAGCGCCCTGAATCATACGAACTTTATTTTGAGATA 828
||||||||||||||||||||||| ||||| | | || | || || ||||||
Sbjct 781 GAAGAGAAGCTTGCAGCTTTATTTCAGCGT--T-A-TC-T--GAG-TTG-----GAGATA 827
Query 829 TGGATTACGACTAAGATTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGAT 888
|||||||||||||||||||| ||||||| |||||||||||||||||| || ||||| |||
Sbjct 828 TGGATTACGACTAAGATTGATGCCGAAACGGTGTCGTGGAGCAAGTTATTTAGAATTGAT 887
Query 889 ACGGGACCTAAGGTAAATG-T-TC-CAGGTAGTTTCTT-GATTGACGAGGAGAAGAAAGT 944
||| |||||||| |||| | | || || ||||||||| | | ||||| |||||||||||
Sbjct 888 ACGAGACCTAAGATAAA-GATATCACA--TAGTTTCTTCG-TAGACGAAGAGAAGAAAGT 943
Query 945 CTTCATGGGTTTTTGTACAGAC-TATAACTCCGACTATGACGACTGTCCCAAAAAATTTA 1003
|||||||||||| ||| | || | | || |||||| | | | |||| ||||| |||||
Sbjct 944 CTTCATGGGTTTCGGTAGAAACCT-TGACCCCGACTCT-A--ATTGTCTCAAAACATTTA 999
Query 1004 TTAACATCATTGGAGAGGCTGGATACTTA-AAGAAATTGGATCTCGGAGTACCTGCATAC 1062
||| |||| | ||||||| |||||||||| || ||| || |||| | || || | | ||
Sbjct 1000 TTAGCATCGTCGGAGAGGATGGATACTTAGAA-AAACTGAATCTTGTAG-ACG-GAA-AC 1055
Query 1063 CA-AAACCATTGGCTAGATGTGTGCTCTTATGTTCCAAGTTTGGTCCAGATCAAGAAAC- 1120
|||| || | | | | | ||||||| |||||||||||||||| |||||| ||
Sbjct 1056 TGTAAACAATA---T-G-T-TAT-CTCTTATATTCCAAGTTTGGTCCAAATCAAGGAAGG 1108
Query 1121 TTGCACGAGGCAAAAGGATAAAACAACGCAGTTTAGAAAAGCATCGATTTGATCAGAACA 1180
|| ||||| |||||| || ||||||| | |||||||||||| |||||||||||| ||||
Sbjct 1109 TT-CACGATGCAAAAAGAGAAAACAAAGTGGTTTAGAAAAGCGTCGATTTGATCAAAACA 1167
> AT5G41490.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr5:16600445-16601608 FORWARD LENGTH=1164
Length=1164
Score = 704 bits (381), Expect = 0.0
Identities = 939/1194 (79%), Gaps = 95/1194 (8%)
Strand=Plus/Plus
Query 1 ATGACGACGATGATCTA-CGATCTTCCAAGGGATTTGATAGAGGAGATTCTTTCTAGGCT 59
||| |||| |||||| | | |||||| |||||||||||||||||||||| | |||||| |
Sbjct 1 ATGGCGACAATGATC-ACCAATCTTCGAAGGGATTTGATAGAGGAGATTATATCTAGGGT 59
Query 60 TCCCTTGAAATCTATGAAAGCAGTGAGGTTAACATGCAAAAGTTGGAACAATTTATTC-A 118
|||||||| ||||||||||||||| || ||||| |||||||||||||| ||| ||| | |
Sbjct 60 TCCCTTGAGATCTATGAAAGCAGTAAGATTAACTTGCAAAAGTTGGAATAATATATCCAA 119
Query 119 AA---AG----T-A--AAG-T----A---A-CAA-CACCAACAAGAGAAGGGGAGACTAT 158
|| || | | ||| | | | || || |||| ||||||||| |||||||
Sbjct 120 AAGTGAGATCTTCACGAAGATGCAGATTGATAAAGCAACAACTAGAGAAGGGAAGACTAT 179
Query 159 GATGATCTTCAGGATGATGCCTGACAGTTTTTGTTTAATGAGCG--G-CATCGTCGATGT 215
|||||| || || |||||||| ||| | ||| ||||||||||| | | ||| ||| ||
Sbjct 180 GATGAT-ATC-GG-TGATGCCTCACAATCTTTCTTTAATGAGCGTCGCCGTCGACGACGT 236
Query 216 TGATCCATCTATAGAGCGTAAAGGTCAACTTAG-TTTCCTT-T-A-CAAAGTCAGTGTAT 271
||||||||| ||||| ||||||||| ||||| |||| || | | | |||||||| ||
Sbjct 237 TGATCCATCCGTAGAGTTTAAAGGTCAGCTTAGTTTTCTTTGTAATC-AAGTCAGTATA- 294
Query 272 C-TAGAATTTA-CCACTATGAGGGTTTAATT-TTATGCAAATTGAAAGACGTTAATAGGG 328
| || || ||| ||| | ||||||||| || |||||| ||||||||| || |||||
Sbjct 295 CATA-AAGTTATCCATTGTGAGGGTTT-GTTGTTATGCTTCTTGAAAGACCATACTAGGG 352
Query 329 TTATGGTTTGGAATCCCTATTTGGGGCAAACAAGGTGGATCAACCTCAGGTATTCTCA-C 387
|| ||||||||||||| |||| ||||||||||||||| |||| ||||| ||| | || |
Sbjct 353 TTGTGGTTTGGAATCCGTATTCCGGGCAAACAAGGTGGGTCAAACTCAGATATCCCCACC 412
Query 388 CT-C-A-T--AAACGGATTCAACAGGTACAGTTATGCTCTCGGATACGAGGAT-AAGGAA 441
|| | | | || | || | ||| ||| ||||| || |||||||||||| |||| |
Sbjct 413 CTCCAAGTCCAAGCAAATGGGATTGGTTCAGATATGCCCTTGGATACGAGGATAAAGG-A 471
Query 442 TCTTGCCGTAGCGTTAAATTGTTGAGGTTTTTAGATTATTT-CTTCCATGCACCCG-AAA 499
||||| |||||||||||||| || ||||||||||||||||| | | | | ||| | |||
Sbjct 472 TCTTGTCGTAGCGTTAAATTCTTAAGGTTTTTAGATTATTTACCT-GAAGAACCAGAAAA 530
Query 500 CACAAtttttttGGTATGAAATCTACGATTTTGATTCTGGTTTATGGAAAACCCTTGATG 559
| ||| | |||| ||||||||||| |||||||| |||| |||||||| ||| |||||||
Sbjct 531 C-CAAAATGTTTGCTATGAAATCTATGATTTTGACTCTGATTTATGGACAACTCTTGATG 589
Query 560 TCACTCCAAACT-GGGGTATATATTGTTCAAGCCCTAGCGT-TTCTCTTAAGGGTAACAC 617
||||| || ||| | || |||| || ||| ||| | |||| || ||| ||||| ||| |
Sbjct 590 TCACTTCACACTCGTGG-ATATGTTATTCTAGCTGTGGCGTGTT-TCTCAAGGGAAACGC 647
Query 618 TTACTGGTGTGCTAGT-AAAAGGAGCTCAGAAGGTTGTATGGATCATATAATATGTTTTG 676
||||||| || | || ||||| |||||||||| | || ||||| ||||| | |||||
Sbjct 648 TTACTGGCCTG-TTGTAAAAAGTAGCTCAGAAGCTAACATCGATCACATAATCTATTTTG 706
Query 677 ATTTTACAAAAGAGAGGTTT-GGGCCGCTTCTACCTCTGCCGTCTAGCGTTAGGGATCGT 735
| ||||||| ||||| |||| ||||||| ||||||| | |||| | ||| || ||||||
Sbjct 707 ACTTTACAAGAGAGA-GTTTCGGGCCGCCTCTACCTTTACCGTTTGGCGCTACAGATCGT 765
Query 736 AAATATAT-ATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTCCA 794
|||| | ||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 766 GGATAT-TCATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTTTTTCA 824
Query 795 GCGCCCTGA-AT--CATACGAACTTT-ATTTTGAGATATGGATTACGACTAAGATTGAGG 850
|| | | | || |||| || | | | |||||||||||| ||||||||||||||||||
Sbjct 825 GCAC--T-ACATTTCATATAAA-TATGAATTTGAGATATGGGTTACGACTAAGATTGAGG 880
Query 851 CCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGATACGGGACCTAAGGTAAATGTTC 910
|||||||||||||||||||||| ||||||||||| ||| ||||||||| || || |||
Sbjct 881 CCGAAATGGTGTCGTGGAGCAAATTCTTGAGAATGGATTTGGGACCTAATATAGATATTC 940
Query 911 CAGGTAGTTTCTTGATTGACGAGGAGAAGAAAGTCTTCATGGGTTTTTGTACAGACTATA 970
|| || |||||| |||||||||||||||||||| |||||||||||| | | | | |||
Sbjct 941 CAATTACTTTCTTCATTGACGAGGAGAAGAAAGTTTTCATGGGTTTT-G-A--G-C-ATA 994
Query 971 ACTCCGACTATGACGACTGTCCCAAAAAATTTATTAACATCATTGGAGAGGCTGGATACT 1030
|| || | | |||||| | ||||||||||||||| ||||||||| ||| |
Sbjct 995 -----GA----GA--A-TATCCCAAGAGATTTATTAACATCATCGGAGAGGCTAAATATT 1042
Query 1031 TAAAGAAA-TTGGATCTCGGAGTACCTGCATA--CCAAAACCATTGGCTAGATGTGTGCT 1087
||| |||| ||||||||| ||||||| || | |||| || ||| | | | ||||||
Sbjct 1043 TAA-GAAAATTGGATCTCCAAGTACCT-CA-AGGCCAATACTGTTGCCCACCTTTGTGCT 1099
Query 1088 CTTATGTTCCAAGTTTGGTCCAGATCAAGAAACTTGCAC-GAGGCAAAAGGATA 1140
||||||||||||||| | |||| |||||||||| ||||| ||||||||| ||||
Sbjct 1100 CTTATGTTCCAAGTTCGATCCAAATCAAGAAACCTGCACTGAGGCAAAAAGATA 1153
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 680 bits (368), Expect = 0.0
Identities = 970/1239 (78%), Gaps = 127/1239 (10%)
Strand=Plus/Plus
Query 1 ATGACGACGATGATCTACGATCTTCCAAGGGATTTGATAGAGGAGATTCTTTCTAGGCTT 60
||| |||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1 ATGGCGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAGGAGATTTTTTCTAGGGTT 60
Query 61 CCCTTGAAATCTATGAAAGCAGTGAGGTTAACATGCAAAAGTTGGAACAATTTAT-TCAA 119
||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| | ||
Sbjct 61 CCCTTGACATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCTAAA 120
Query 120 A---AG---T--A--AAG-TA-ACA-----ACA-C--CAACAAGAGAAGGGGAGACTATG 159
| || | | ||| | ||| | | | |||||||||||| | ||||||||
Sbjct 121 AGTGAGAGCTTTACGAAGGTGCACATTGGTAGAGCAGCAACAAGAGAAGAGAAGACTATG 180
Query 160 AT-GATCTTCAGGATGATGCCTGACAGTTTTTGTTTAATGAGCG--G-CATCGTCGATGT 215
|| | || | | |||||||| ||| || ||||||||| | ||||| ||| ||
Sbjct 181 ATAG-TCG--ATG-TGATGCCTCACAAACTTAATTTAATGAGTATTGTCATCGACGACGT 236
Query 216 TGA-TCCATCTATAGAGCGTAAAGGTCAACTTAGTTTCCTTTACAA-AG-T-CAGTGTA- 270
| | ||||||| |||| ||||||||| ||||||| ||| |||| | | | || ||
Sbjct 237 T-ACTCCATCTGCAGAGTTTAAAGGTCAGTTTAGTTTACTTCACAAGAACTACCGTATAA 295
Query 271 -TCTAGAATTTACCACTATGAGGGTTTAATT-TTATGCAA-ATTGAAAGA-CGTTAATAG 326
|| || || || ||||||||||||| || ||||||| || |||||| | | | |||
Sbjct 296 ATCAAGTCTT-AC-ACTATGAGGGTTTG-TTGTTATGCATTAT-GAAAGATCCT-ACTAG 350
Query 327 GGTTATGGTTTGGAATCCCTATTTGGGGCAAACAAGGTGGATC-AACCTCAGGTATTCTC 385
| || ||||||||||||| |||||||| ||||||||||||||| ||| ||||||||| ||
Sbjct 351 GATTGTGGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCCAAC-TCAGGTATTTTC 409
Query 386 ACC-TCATAAACGGATTCA-AC-AGGTACAGTTATGCTCTCGGATACGAGGATAAGGAAT 442
||| || | | ||| | | || | | ||| |||||||||||||||| |||||||||||
Sbjct 410 ACCGTCC-ACATGGAAT-AGACCATTT-CAGATATGCTCTCGGATACGCGGATAAGGAAT 466
Query 443 CTTGCCGTAGCGTTAAATTGTTGAGGTTTTTAGATTATTTCTTCCATGCACCCGAA-ACA 501
|||| ||||| ||||||| || ||||||||||||||||||| | | ||||||||| |
Sbjct 467 CTTGTAGTAGCCTTAAATTCTTAAGGTTTTTAGATTATTTCTACAAAGCACCCGAAGAGG 526
Query 502 CAAtttttttGGTATGAAATCTACGATTTTGATTCTGGTTTATGGAAAACCCTTGATGTC 561
||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||
Sbjct 527 -AATTTTTTTGGTATGAAATCTACGATTTTGACTCTGGTTTATGGACAACTCTTAATGTC 585
Query 562 ACTCCAAACTGGGGTATATATT-GTTCAAGCCCTAGCGTTTCTCTTAAGGGTAACACTTA 620
|||||| |||||||||| |||| | | ||||| | ||||| |||||||| ||||||||
Sbjct 586 ACTCCACACTGGGGTATTTATTCGA-CTTGCCCTTGTGTTTCCCTTAAGGGAAACACTTA 644
Query 621 CTGGTGTGCTAGTA-AAAGGAGCTCAGAAGGTTGT--ATGGATCATATAATATGTTTTGA 677
|||| ||||| | |||||||| || |||||| | | | || ||||||| |||| ||
Sbjct 645 CTGGCCTGCTAA-AGAAAGGAGCACACAAGGTT-TCCAAG-ATTATATAATCCGTTTCGA 701
Query 678 TTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCTAGCGTTAGGGATCGTAA 737
|||||||| |||||| ||||| || |||||| ||||||| | | || | ||||| |
Sbjct 702 TTTTACAAGAGAGAGATTTGGACCCCTTCTAGCTCTGCC-T--A-CG---G--ATCGTGA 752
Query 738 ATATAT-ATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTC---C 793
|| | | || ||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 753 ATCT-TCATTTGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTTAAGC 811
Query 794 A--G-C-GC-CC-TGAATCATACGAACTTT-ATTTTGAGATATGGATTACGACTAAGATT 846
| | | || || ||| ||||||||| | | | |||||||||||||||||||||||||||
Sbjct 812 ACCGGCTGCACCATGATTCATACGAA-TATGAGTTTGAGATATGGATTACGACTAAGATT 870
Query 847 GAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGATACGGGACCTAAGGTAAAT 906
|||| ||||||||| ||||||||||||||||||||||| |||| | |||||||| | |
Sbjct 871 GAGGTCGAAATGGTTTCGTGGAGCAAGTTCTTGAGAATGGATATGAGACCTAAGATGGA- 929
Query 907 G-TTCCAGGTAGTTTCTTGATTGACGAGGAGAAGAAAGTCTTCATGGGTTTTTG-TACA- 963
| ||||| || ||||| |||||||| ||||||||||| |||||||| ||| | | ||
Sbjct 930 GCTTCCACTTACTTTCTACATTGACGAAGAGAAGAAAGTTTTCATGGGATTT-GAT-CAT 987
Query 964 G-ACTATAACTCCGACTATGACGACTGTCCCAAAAAATTTATTAACATCATTGGAGAGGC 1022
| | ||| ||| | | | | | | | | ||| ||||| || |||||||| |
Sbjct 988 GGAGAATA--TCC--C-A--A-G--T-T---ATTA--TTTCTTAACGTCGTTGGAGAGAC 1031
Query 1023 TGGATACTTAAAGAAATTGGATCTCGGAGTACCTGCATACCAAAACCATTGGCTAGATGT 1082
||||| ||||| |||| || ||| || | | || |||| ||| || || | ||
Sbjct 1032 TGGATTCTTAA-GAAA----AT-TCG-AGAA--T--AT-CCAATACCGTTCGCCA--TG- 1076
Query 1083 GTGCTCTTATGTTCCAAGTTTGGTCCA-GATCAAGAAACTTGCACGAGGCAAAAGGATAA 1141
|||||||||||||||||||||||| | |||||||||||||||||| || | || ||
Sbjct 1077 ---CTCTTATGTTCCAAGTTTGGTCCAAG-TCAAGAAACTTGCACGAGACAGACTGAGAA 1132
Query 1142 AACAACGCAGTTTAGAAAAGCATCGATTTGATCAGAACA 1180
||||||| ||||||||||| | |||||||| ||| ||||
Sbjct 1133 AACAACGTAGTTTAGAAAACCGTCGATTTGCTCAAAACA 1171
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 658 bits (356), Expect = 0.0
Identities = 960/1234 (78%), Gaps = 112/1234 (9%)
Strand=Plus/Plus
Query 1 ATGACGACGATGATCTAC-GATCTTCCAAGGGATTTGATAGAGGAGATTCTTTCTAGGCT 59
||| |||| | ||||| | ||||||| ||||| |||||||||||||||||||||||| |
Sbjct 1 ATGGCGACAACGATCT-CTAATCTTCCGAGGGAGTTGATAGAGGAGATTCTTTCTAGGGT 59
Query 60 TCCCTTGAAATCTATGAAAGCAGTGAGGTTAACATGCAAAAGTTGGAACAATTTAT-T-C 117
|||||||| | | ||||||||| |||| ||||| |||||||||||||||||||||| |
Sbjct 60 TCCCTTGAGAGCCATGAAAGCAATGAGATTAACTTGCAAAAGTTGGAACAATTTATCTAA 119
Query 118 AA---A-AG---TA--AAG-T-AACA-----ACA-C--CAACAAGAGAAGGGGAGACTAT 158
|| | || || ||| | ||| | | | |||||||||||| | |||| ||
Sbjct 120 AAGTGAGAGTTTTATGAAGATGCACATTGGTAAAGCTGCAACAAGAGAAGAGAAGACCAT 179
Query 159 GATGATCTTCAGGATGATGCCTGACAGTTTTTG-TTTAATGAGCG--G-CATCGTCGATG 214
|||| | | | || |||||||| ||| | ||| |||| |||||| | | ||| || |
Sbjct 180 GATGGT-TGC-GG-TGATGCCTCACA-CTCTTGCTTTAGTGAGCGTTGTCGTCGACGGCG 235
Query 215 TTGATCCATCTATAGAGCGTAAAGGTCAACTTAGTTTCCTTTAC-A--AAGTCAGTGTAT 271
|| ||||||||| ||||| ||||||||| ||||||||||| || | || || | |||
Sbjct 236 TTAATCCATCTACAGAGCTTAAAGGTCAGTTTAGTTTCCTTGACAAGGAATTCTTTATAT 295
Query 272 CTAGAATTTA-CCACTATGAGGGTTTAATTTTATGCAAATTGAAAGACGTTAATAGGGTT 330
| | | | | ||||||||||||||| | ||||| | |||||||||| || |||| ||
Sbjct 296 ATCG-AGTCATCCACTATGAGGGTTTGCTGTTATGTATTTTGAAAGACGCTACTAGGATT 354
Query 331 ATGGTTTGGAATCCCTATTTGGGGCAA-ACAAGGTGGAT-CAACCTCAGGTATTCTCACC 388
||||||||||||| |||||||||||| | ||||||||| ||| |||| ||||||||||
Sbjct 355 GTGGTTTGGAATCCGTATTTGGGGCAAGA-AAGGTGGATCCAA-ATCAGATATTCTCACC 412
Query 389 -TCATAAACGGAT-TCA-A-CAGGTACAGTTATGCTCTCGGATACGAGGATAAGGAATCT 444
|| | | || | | | | || | || |||||| | ||||||| || |||| ||||
Sbjct 413 GTC-CACATGG-TGT-AGACCA-TTTCAAATATGCTGTTGGATACGCCGACAAGGTATCT 468
Query 445 TGCCGTAGCGTTAAATTGTTGAGGTTTTTAGATTATTTCTTCCATGCACCCGA-AACACA 503
|| |||||||||||||| |||||||||||||||||||| | | ||| |||| || ||
Sbjct 469 TGTCGTAGCGTTAAATTACTGAGGTTTTTAGATTATTTCCACAAAGCATCCGATAA-ACC 527
Query 504 AtttttttGGTATGAAATCTACGATTTTGATTCTGGTTTATGGAAAACCCTTGATGTCAC 563
|||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||| ||||
Sbjct 528 ATTTTTTTGGTATGAAATCTACGATTTTGACTCTTGTTTATGGACAACTCTTGATATCAC 587
Query 564 TCCAAACTGGGGTATATATTGTTC-AAGCCCTAGCGTTTCTCTTAAGGGTAACACTTACT 622
|||| | |||||||||| ||| | | |||||| ||||| |||||||| ||||||||||
Sbjct 588 TCCACATTGGGGTATATCTTGGACTTA-CCCTAGAGTTTCCCTTAAGGGAAACACTTACT 646
Query 623 GGTGTGCTAGTA-AAAGGAGCTCAGAAGG-TTGTATGGATCATATAATATGTTTTGATTT 680
|| |||||| | ||| || | || |||| || | ||||| ||||| |||||||||||
Sbjct 647 GGCCTGCTAG-AGAAATGAACACAAAAGGTTTCCA-AGATCACATAATCTGTTTTGATTT 704
Query 681 TACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCTAGCGTTAGGGATCGTAAATA 740
||||| ||||| ||||| ||||||||| || |||| | ||||| || || |
Sbjct 705 TACAAGTGAGAGATTTGGTCCGCTTCTA------CC-TCTA-C-CTAGGGCTC--AAGGA 753
Query 741 TATATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTA-TT-----CCA 794
| | |||||| |||||||||||||||||||||||||||||||| |||| || ||
Sbjct 754 TGT-CATGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGTTTTACTTAAGCACCG 812
Query 795 GC-GC-CC-TGAATCATACGAACT-TTATTTTGAGATATGGATTACGACTAAGATTGAGG 850
|| || || || ||||||||| | | | ||||||||||||||||||||||||||||| |
Sbjct 813 GCTGCACCACGATTCATACGAA-TATGAGTTTGAGATATGGATTACGACTAAGATTGACG 871
Query 851 CCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGATACGGGACCTAAGGTAAATG-TT 909
||||||||||||||||||||||||||||||||| |||| | |||||||| |||| | ||
Sbjct 872 TCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATATGAGACCTAAGATAAA-GCTT 930
Query 910 CCAGGTAGTTTCTT-GATTGACGAGGAGAAGAAAGTCTTCATGGGTTTTTGTACAGACTA 968
||| |||||||| | ||||||| ||||||||||| |||||||||||| | | | |
Sbjct 931 CCACTTAGTTTCTACG-TTGACGAAGAGAAGAAAGTTTTCATGGGTTTT-G-AT---C-A 983
Query 969 TAACTCCGACTATGACGACTGTCCCAAAAAATTTATTAACATCATTGGAGAGGCTGGATA 1028
| || || | | ||||| |||| ||||||||||||||||| ||||||
Sbjct 984 TGGG---GA--AT-A----T--CCCAAGTTATTTCTTAACATCATTGGAGAGACTGGATT 1031
Query 1029 CTTAAAGAAA-TTGGATCTCGGAGTACCTGCATACCAAAACCATTGGCTAGATGTGTGCT 1087
||||| |||| |||||||||||||||| || | ||| || || || | || ||
Sbjct 1032 CTTAA-GAAAATTGGATCTCGGAGTACATGAAGGCCA---CCGTTCGCCA--TG----CT 1081
Query 1088 CTTATGTTCCAAGTTTGGTCCAGATCAAGAAACTTGCACGAGGCAAAAGGATAAAACAAC 1147
|||||||||||||||||||||| |||||| | | |||| ||| ||||| ||||||||||
Sbjct 1082 CTTATGTTCCAAGTTTGGTCCAAATCAAGCATCCTGCAGGAGACAAAATGATAAAACAAA 1141
Query 1148 GCAGTTTAGAAAAGCATCGATTTGATCAGAACAG 1181
| ||||||||| | | |||||||| ||| |||||
Sbjct 1142 GTAGTTTAGAAGACCGTCGATTTGCTCAAAACAG 1175
Score = 135 bits (73), Expect = 1e-30
Identities = 223/290 (77%), Gaps = 31/290 (11%)
Strand=Plus/Plus
Query 1372 AAGGGAAACACTTACTGGTGC-GCTTA-TGAAAGGAGCTTAAACGG--TCACGAGCATCA 1427
|||||||||||||||||| | || || |||| || | ||| || || | || ||||
Sbjct 631 AAGGGAAACACTTACTGG-CCTGC-TAGAGAAATGAACACAAAAGGTTTC-CAAG-ATCA 686
Query 1428 TATAATATGTTTTGATTTTACAAAAGAGAGGTTTGGACCGCTTCTGCCTCTGCCGTCTAG 1487
||||| |||||||||||||||| ||||| ||||| |||||||| ||||| | ||||
Sbjct 687 CATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTACCTCT-AC--CTAG 743
Query 1488 CATTACGGATCATGAATATAAAATCGTAACTTTATCGTGTGTTAAAGAAGAGAAGATTGC 1547
|| ||| | || | || || | |||||| |||||||||||||||||| ||||
Sbjct 744 ------GGCTCAAGGATGT--CAT-GTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGC 794
Query 1548 AGCTTTATTTTGGCACAAG--G-----C-A-TCATATG-ATACTGAGATTGAGATATGGA 1597
|| |||| || |||| | | | | ||||| | ||| |||| ||||||||||||
Sbjct 795 AGTTTTACTTAAGCACCGGCTGCACCACGATTCATACGAATA-TGAGTTTGAGATATGGA 853
Query 1598 TTACAACTAAGATTGAAGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 1647
|||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 854 TTACGACTAAGATTGACGTCGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 903
> AT2G38590.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:16142897-16144184 FORWARD LENGTH=1288
Length=1288
Score = 553 bits (299), Expect = 3e-156
Identities = 786/1005 (78%), Gaps = 98/1005 (10%)
Strand=Plus/Plus
Query 222 ATCTATAGAGCGTAAAGGTCAACTTAGTTTCCTT--T--ACAAAGTC-AGTGTATCTAGA 276
|||||||| | |||| |||||| || ||||||| | || ||||| || ||||| |
Sbjct 279 ATCTATAGCGTTTAAACGTCAACCTATTTTCCTTGATGAAC-AAGTCAAG-ATATCT-CA 335
Query 277 A-TTTACCACTATGAGGGTTTAATT-TTATGCAAATT--GA-AAGACGTTA-ATAGGGTT 330
| ||| |||| ||| ||||| ||| |||||| || | |||||| || | ||||||
Sbjct 336 AGTTTTTCACTGTGAAGGTTT-ATTGTTATGCTTCTTAAAAGAAGACGATACA-AGGGTT 393
Query 331 ATGGTTTGGAATCCCTATTTG-GGGCAAACAAGGTGGAT-CAACCTCAGGTATTCTCACC 388
| ||||||||||| || ||| || |||||||||||||| ||| ||||| ||||||||||
Sbjct 394 GTCGTTTGGAATCCGTA-TTGCGGACAAACAAGGTGGATCCAA-CTCAGATATTCTCACC 451
Query 389 -TCATAAACGGATTCA-ACAGGTACAGTTATGCTCTCGGATACGAGGATAAGGAATCTTG 446
|| | || | | |||||| || ||| ||||| |||||| |||||||||||||| |
Sbjct 452 GTC-CACAC--A--AAGACAGGTTCATTTACGCTCTAGGATACAAGGATAAGGAATCTCG 506
Query 447 CCGTAGCGTT-AAATTGTTGAGGTTTTTAGATTATTT-CTTCCATGCACCCGAAACA-CA 503
||||| || |||| ||||||||| |||||||||| || | |||||| ||| | ||
Sbjct 507 TGGTAGC-TTCCAATTATTGAGGTTTGTAGATTATTTCCTAGGA-GCACCC-AAAAATCA 563
Query 504 AtttttttGGTATGAAATCTACGATTTTGATTCTGGTTTATGGAAAACCCTTGATGTCAC 563
|| ||||||||||||||| ||||||||| | |||| || ||||| ||| |||||||||||
Sbjct 564 ATATTTTTGGTATGAAATTTACGATTTTAACTCTGATTCATGGACAACTCTTGATGTCAC 623
Query 564 TCCAAACTGGGGTATATATTGTTCAAG-CCCTAGCGTTTCTCTTAAGGGTAACACTTACT 622
|||| ||||| ||||||| |||| | || | | |||||||| || || ||||||||||
Sbjct 624 TCCACACTGGTGTATATACTGTT-GTGACCGTGGTGTTTCTCTCAACGGAAACACTTACT 682
Query 623 GGTGTGCTAGTA-AAAGGAGCTCAGAAGGTTG-TA-TG--GATCATATAATATGTTTTGA 677
||||||||| | |||||| ||||| | | || || ||||| || |||| ||||||
Sbjct 683 GGTGTGCTA-AAGAAAGGAAAGCAGAA-GACGATATTGTCGATCACATCATATCTTTTGA 740
Query 678 TTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCT-AGCGTTAGGGATCGTA 736
||||||||| ||||| |||||||||||| | ||| |||||||| || |||| ||| | |
Sbjct 741 TTTTACAAACGAGAGATTTGGGCCGCTTTTGCCTTTGCCGTCTAAG-GTTATGGAACATG 799
Query 737 AATAT-ATATATGTGAA-TTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTCCA 794
||||| | || ||| || |||||||| |||||||||||||||||||||||||||||| ||
Sbjct 800 AATATGAAAT-TGT-AACTTTATCTTATGTTAAAGAAGAGAAGCTTGCAGCTTTATTTCA 857
Query 795 GCGCC-CTGAATCATAC-G-AACTTTATTTTGAGATATGGATTACGACTAAGATTGAGGC 851
|| | ||| || | | || | | ||||| ||||||||||||||||||||||| ||
Sbjct 858 GCATTAC-GAAGCAGATTGGAA-TG-AGTTTGATATATGGATTACGACTAAGATTGATGC 914
Query 852 CGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGATACGGGACCTAAGG-TAAATGTTC 910
||| ||||||||||||||| |||||||||||| ||||||||||||| || || | ||||
Sbjct 915 TGAAGTGGTGTCGTGGAGCATGTTCTTGAGAATGGATACGGGACCTA-GGATAGAGGTTC 973
Query 911 CAG------GT-A-G-TTTCTTGATTGACGAGGAGAAGAAAGTCTTCATGGGTTTTTGTA 961
|| || | | |||||| ||||| ||||||||||||||| |||||||||| | |
Sbjct 974 CACATATATGTGAAGGTTTCTTCATTGATGAGGAGAAGAAAGTCGCCATGGGTTTT-G-A 1031
Query 962 CAGACTATAACTCCGACTATGACGACTGTCCCAAAAAATTTATTAACATCATTGGAGAGG 1021
||| | |||| | ||| | | ||||| |||||| |||||||||||| |
Sbjct 1032 -AGA--A-------GACT-T--CGA-T--CGCAAAACATTTAT---CATCATTGGAGAAG 1072
Query 1022 CTGGATACTTAAAGAAA-TTGGATCTCGGAGTACCTGCATACCA-AAACCAT-T-GGCTA 1077
|||||||| ||| |||| |||||| || || || || | || | ||| || | ||| |
Sbjct 1073 CTGGATACGTAA-GAAAATTGGATATCAAAGCACATGTAGAC-AGAAA--ATGTCGGCCA 1128
Query 1078 GA-TGTGTGCTCTTATGTTCCAAGTTTGGTCCAGATCAAGAAACTTGCACGAGGCAAAAG 1136
| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 1129 -ACTGTGTGTTCTTATGTTCCAAGTTTGGTCCAAATCAAGAAACCTGCACGAGGCAAAAG 1187
Query 1137 GATAAA-ACAACGCAGTTTAGAAAAGCATCGATTTGATCAGAACA 1180
|| ||| |||| |||| |||||||||| || ||||||||| ||||
Sbjct 1188 GA-AAAGACAAAGCAGCTTAGAAAAGCGTCTATTTGATCAAAACA 1231
> AT5G41494.1 | Symbols: | pseudogene of F-box family protein
| chr5:16602589-16603438 FORWARD LENGTH=850
Length=850
Score = 459 bits (248), Expect = 7e-128
Identities = 635/811 (78%), Gaps = 70/811 (9%)
Strand=Plus/Plus
Query 404 ACAGGTACAGTTATGCTCTCGGATACGAGGATAAGG-AATCTTGCCGTAGCGTTAAATTG 462
||| || |||||||||||| ||||| ||| || ||| ||||||| |||| |||||| ||
Sbjct 41 ACATGTTCAGTTATGCTCTTGGATATGAGAAT-AGGAAATCTTGTCGTACCGTTAATTTC 99
Query 463 TTGAGGTTTTTAGATTATTT-CTTCCATGCACCCGAAACACAAt-ttttttGGTATGAAA 520
||||||||| |||| ||||| |||| | | || | ||| | | | ||||| |||| ||||
Sbjct 100 TTGAGGTTTGTAGACTATTTACTTCAACG-ACTC-AAAGAGAGTGTTTTTGGGTACGAAA 157
Query 521 TCTACGATTTTGA-TTCTGGTTTATGGAAAACCCTTGATGTCACTCCAAACTGGGGTAT- 578
||||||||||||| || | || ||||| ||| |||||||||| |||| ||||| |||
Sbjct 158 TCTACGATTTTGACTT-AGATTCATGGACAACTCTTGATGTCAGTCCACACTGGCATATA 216
Query 579 ATATTGTTCAAG-CCCTAGCGTTTCTCTTAAGGGTAACACTTACTGGTGTGCTAGTA-AA 636
||| | || | || | || || |||||||| | |||||||||||| |||||| | ||
Sbjct 217 ATA-TCTT-GTGACCTTGGCATTACTCTTAAGAGAAACACTTACTGGCATGCTAG-AGAA 273
Query 637 AGGAGCTCAGAAGGTTGTAT-G--GATCATATAATATGTTTTGATTTTACAAAAGAGAGG 693
| || | ||||| ||| | ||||| |||||||||||||||||||||| ||||||
Sbjct 274 ATGAATTTAGAAGAAAATATCGTCGATCACATAATATGTTTTGATTTTACAAGAGAGAGA 333
Query 694 TTTGGGCCGCTTCTACCTCTGCCG-TCTAGCGTTAGGGATCGTAAATAT-ATATATGTGA 751
||| | |||||||| ||||||||| | ||||||| ||| || | | ||| | |||| |||
Sbjct 334 TTTAGACCGCTTCTGCCTCTGCCGGT-TAGCGTTGGGGTTCATGATTATGA-ATATTTGA 391
Query 752 ATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTCCAGCGC-CCTGAATCATA- 809
||||||| |||||| ||||||||||||||| |||||||| |||| | || |||||| |
Sbjct 392 CTTTATCTCGTGTTAGAGAAGAGAAGCTTGCCGCTTTATTTCAGCACACC-GAATCAAAT 450
Query 810 CGA-ACTTTATTTTGAGATATGGATTACGACTAAGATTGAGGCCGAAATGGTGTCGTGGA 868
| | | | | |||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 451 CCATA-TG-AGCTTGAAATATGGATTACAACTAAGATTGAGGCTGAAATGGTGTCGTGGA 508
Query 869 GCAAGTTCTTGAGAATCGATACGGGACCT-A-A----GGT-A-AA-TGT-TCC-A-GGTA 916
|||||||||||||||| |||||||||||| | | ||| | || | | | | || |
Sbjct 509 GCAAGTTCTTGAGAATGGATACGGGACCTGATATATTGGTCACAACTATATGTGAAGG-A 567
Query 917 GTTTCTTGATTGACGAGGAGAAGAAAGTCTTCATGGGTTTTTGTACAGACTATAACTCCG 976
| ||| ||||||||||||||||||||| |||||| |||| | || | | | |
Sbjct 568 -TA-CTTCATTGACGAGGAGAAGAAAGTCGCCATGGGATTTTA-AT-GA--AGA-CA--G 618
Query 977 ACTATGACGACTGTCCCAAAAA-ATTTATTAACATCATTGGAGAGGCTGGATACTTAAAG 1035
| | ||| | | ||| || || ||||| ||| ||||||||||||||||||||||
Sbjct 619 A--A-GAC-A-T-TCC-AAGAACATTTAG---CATTATTGGAGAGGCTGGATACTTAAT- 667
Query 1036 AAATTG-GATCTCGGAGTAC-CTGCATACCAAAACCATTGGCTAGATGTGTGCTCTTATG 1093
||||| ||| | ||||||| | || |||||| | ||||| |||||||||||||||
Sbjct 668 AAATTTAGATATTGGAGTACTCA-CAAACCAAATGTGTCGGCTACATGTGTGCTCTTATG 726
Query 1094 TTCCAAGTTTGGTCCAGATCAAGAAACTTGCACGAGGCAAAAGGAT-AAA-ACAACGCAG 1151
|||||||||||||||| |||||||||| ||||| | |||||||||| ||| |||| ||||
Sbjct 727 TTCCAAGTTTGGTCCAAATCAAGAAACCTGCACTACGCAAAAGGATCAAAGACAAAGCAG 786
Query 1152 TTTAGAAAAGC-ATCGATTTG-ATCAGAACA 1180
||||||||||| | ||||||| | |||||||
Sbjct 787 TTTAGAAAAGCCA-CGATTTGCA-CAGAACA 815
Score = 226 bits (122), Expect = 7e-58
Identities = 194/228 (85%), Gaps = 8/228 (4%)
Strand=Plus/Plus
Query 1424 ATCATATAATATGTTTTGATTTTACAAAAGAGAGGTTTGGACCGCTTCTGCCTCTGCC-G 1482
|||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |
Sbjct 299 ATCACATAATATGTTTTGATTTTACAAGAGAGAGATTTAGACCGCTTCTGCCTCTGCCGG 358
Query 1483 TCTAGCATTACGGATCATGAATAT-AAAATCGTAACTTTATCGT-GTGTTAAAGAAGAGA 1540
| |||| || || |||||| ||| || || | |||||||| | |||||| ||||||||
Sbjct 359 T-TAGCGTTGGGGTTCATGATTATGAATAT-TTGACTTTATC-TCGTGTTAGAGAAGAGA 415
Query 1541 AGATTGCAGCTTTATTTTGGCACAAGGCATCATAT-GATACTGAGATTGAGATATGGATT 1599
|| |||| ||||||||| ||||| | |||| || ||| |||| |||| |||||||||
Sbjct 416 AGCTTGCCGCTTTATTTCAGCACACCGAATCAAATCCATA-TGAGCTTGAAATATGGATT 474
Query 1600 ACAACTAAGATTGAAGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 1647
|||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 475 ACAACTAAGATTGAGGCTGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 522
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 433 bits (234), Expect = 4e-120
Identities = 560/706 (79%), Gaps = 67/706 (9%)
Strand=Plus/Plus
Query 214 GTTGATCCATCTATAGAGCGTAAAGGTCAACTTAGTT-TCCTTTA--CA-AAGTC-AGTG 268
|||||||||||||||||| ||||||| ||||||||| | ||| | | ||||| ||
Sbjct 232 GTTGATCCATCTATAGAGTTTAAAGGTAAACTTAGTTGT-CTTAAGGAACAAGTCAAG-A 289
Query 269 TATCTAGAA-T-TTACCACTATGAGGGTTTAATT-TTATGCAAATTGAAAGACGTTAATA 325
||||| || | || |||| ||||||||| ||| ||||||| |||||||||| || ||
Sbjct 290 TATCT-CAAGTCTT-TCACTGTGAGGGTTT-ATTGTTATGCATCTTGAAAGACGATACTA 346
Query 326 GGGTTATGGTTTGGAATCCCTATTTGG--GGCAAACAAGGTGGATCA-ACCTCAGGTATT 382
|| || | ||||||||||| || | || || ||||||||||||||| |||| || ||||
Sbjct 347 GGATTGTTGTTTGGAATCCGTA-TAGGCAGG-AAACAAGGTGGATCATACCT-AGATATT 403
Query 383 CTCACC-T-CATAAACGGATTCAACAGGTA-CAGTTATGCTCTCGGATACGAGGATAAGG 439
|||||| | ||| ||| | | |||| || ||| |||||||| ||||||||| ||||
Sbjct 404 CTCACCGTCCAT--ACGTAATGAACA-ATATCAGATATGCTCTTGGATACGAGAATAATA 460
Query 440 AATCTTGCCGTAGCGTTAAATTGTTGAGGTTTTTAGATTATTTCTTCCATGCACCCG-AA 498
||||| | |||||| ||||||| ||||||||| ||||||||| | | | || ||| ||
Sbjct 461 AATCTGGTCGTAGCCTTAAATTATTGAGGTTTATAGATTATTGC-T--A--CA-CCGAAA 514
Query 499 A-CACAAtttttttGGTATGAAATCTACGATTTTGATTCTGGTTTATGGAAAACCCTTGA 557
| ||| | ||| |||| ||||||||||||||||||| |||| |||||||| ||| |||||
Sbjct 515 AGCAC-A-TTTGTTGGCATGAAATCTACGATTTTGACTCTGATTTATGGACAACTCTTGA 572
Query 558 TGTCACTCCAAACTGGGGTATATATTGTTC-AA---G-C------CCTA-GCGTTTCTCT 605
|||||||||| | | ||||||||||| || || | | || | |||| |||||
Sbjct 573 TGTCACTCCACA-T-TGGTATATATTG-TCTAATTGGTCTTGTGTCCAAGGCGTCTCTCT 629
Query 606 -TAAGGGTAACACTTACTGGTGTGCTAGTAAAAG-GAGCTCAGAAGGTTGTATGGATCAT 663
||||| |||||||||||||||||||| | ||| | |||||| || | || |||||
Sbjct 630 CAAAGGG-AACACTTACTGGTGTGCTAG-AGAAGAAAACTCAGATGG-T-TA-CAATCAT 684
Query 664 ATAATATGTTTTGATTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCC-GTCTAG 722
||||| |||||||||||||||| |||||| ||||| |||||||| ||||| || || ||
Sbjct 685 ATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCTACCGGT-TAA 743
Query 723 CGTTAGGGATCGTAAATAT-ATATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTG 781
||||| ||| | ||||| | |||||||| || ||||||||||| ||||| |||| |||
Sbjct 744 CGTTATAGATAATGAATATGA-ATATGTGACTTCATCTTGTGTTAGAGAAGGGAAGATTG 802
Query 782 CAGCTTTATTCCAGCGC-CCTGAATCATA-CGAACT-TTATTTTGAGATATGGATTACGA 838
| |||||||| |||| | | || ||||| | | | | | ||||||||||||||||||
Sbjct 803 CGGCTTTATTTCAGCACAAC-GATTCATATC-CA-TATGAGCTTGAGATATGGATTACGA 859
Query 839 CTAAGATTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAAT 884
||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 860 CTAAGATTGAGGCGGAAATGGTGTCGTGGAACAAGTTCTTGAGAAT 905
Score = 134 bits (72), Expect = 4e-30
Identities = 94/104 (90%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 1079 ATGTGTGCTCTTATGTTCCAAGTTTGGTCCAGA-TCAAGAAACTTGCACGAGGCAAAAGG 1137
|||||||||||||||||||||||||||||| || | ||||||| ||||| ||||||||||
Sbjct 1124 ATGTGTGCTCTTATGTTCCAAGTTTGGTCC-GAATTAAGAAACCTGCACAAGGCAAAAGG 1182
Query 1138 ATAAA-ACAACGCAGTTTAGAAAAGCATCGATTTGATCAGAACA 1180
| ||| |||| ||||||||||||||| |||||||||||| ||||
Sbjct 1183 A-AAAGACAAAGCAGTTTAGAAAAGCTTCGATTTGATCAAAACA 1225
> AT1G48625.1 | Symbols: | pseudogene of F-box family protein
| chr1:17979561-17980815 FORWARD LENGTH=1255
Length=1255
Score = 355 bits (192), Expect = 9e-97
Identities = 681/900 (76%), Gaps = 102/900 (11%)
Strand=Plus/Plus
Query 121 AGTAAAGTAACAACACCAA-CAAGAGAAGGGGAGACTATGATGATCTTCAGGATGATGCC 179
|||||| ||||| | || |||||||||||||| ||| ||| | ||| | |||||
Sbjct 154 AGTAAAACAACAAGA-GAATCAAGAGAAGGGGAGTCTACGAT-A--ATCACGTTGATGAA 209
Query 180 TGACAGTTTTTGTTTAATGAG-CGGCATCGTCGATGTTGATCCATCTATAGAGCGTAAAG 238
| ||| ||||||||| ||| | | ||||||| ||||| |||| |||||||| ||||
Sbjct 210 TTACAAACTTTGTTTAACGAGTC-TCGTCGTCGACGTTGACCCATATATAGAGCACAAAG 268
Query 239 GT---C-AACTTAG-TTT--CCTTTA-CA--AAGTC-AGTGTATCTAGAA-T-TTACCAC 285
|| | ||||| | ||| ||| | || ||||| || ||||| || | || ||
Sbjct 269 GTAAACTAACTT-GCTTTAATCTTGAGCATCAAGTCAAG-ATATCT-CAAGTCTT-TTAC 324
Query 286 TATGAGGGTTTAA-TTTTATGCAAATTGAAAGACG------TTA--A-TAGGGTTATGGT 335
||||||||||||| |||||||| ||||||||||| ||| | |||| || ||||
Sbjct 325 TATGAGGGTTTAATTTTTATGCGTATTGAAAGACGATACAATTACTACTAGGCTTGTGGT 384
Query 336 TTGGAATCCCTATTTGGGGCAAACAAGGTGGATC--AACCTCAGGTATTCTCA-C-CTCA 391
||||||||| |||| ||||||||||||| |||| |||| | | |||||||| | | ||
Sbjct 385 TTGGAATCCGTATTGGGGGCAAACAAGGCAGATCAAAACC-C-GATATTCTCACCACGCA 442
Query 392 ---T---AAACGGAT--T-C-AACAGGTACAGTTA-TGCTCTCGGATACGAGGATAAGGA 440
| || |||| | | ||| || || ||| | |||||||||||||| |||| ||
Sbjct 443 TTCTCCGGAAGGGATAGTACGTACATGTTCAATTACT-CTCTCGGATACGAGAATAA-GA 500
Query 441 A-TCTTGCCGTAGCGTTAAATTGTTGAGGTTTTTAGATTAT--TT---CTTCCAT-GCAC 493
| || || || ||| ||||| ||||||||| |||||||| || || || ||
Sbjct 501 ATTCATGTCGCAGCCACAAATTATTGAGGTTTATAGATTATCATTGGAATT--ATCGCGG 558
Query 494 CCGAAACACAAtttttttGGTATGAAATCTACGATTTTGATTCTGG-TTTATGGAAAACC 552
|| | || |||||||||||||||||||||||||||||||| || || |||||||| |||
Sbjct 559 CCTACAC-CAATTTTTTTGGTATGAAATCTACGATTTTGACTC-GGATTTATGGACAACT 616
Query 553 CTTGATGTCACTCCAAACTGGGGTATA--TATTGT-TC-AAGCCCTAGCGTTTCTCTTAA 608
||||||||||||||| ||||| |||| |||| | || ||| | | ||||| || ||
Sbjct 617 CTTGATGTCACTCCACACTGGTTTATAGTTATT-TCTCAAAG---TGGTGTTTCCCTCAA 672
Query 609 GGGTAACACTTACTGGTGTGCTAGTAAAAGGAGCTCAGAAGGTTGTATG-GATCATATAA 667
||| ||||| |||||||||||||| || ||||| | | |||| || | ||||| || |
Sbjct 673 GGGAAACACATACTGGTGTGCTAGGAAGAGGAG--C-GGCGGTTATA-GCGATCACATTA 728
Query 668 TATGTTTTGATTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCTAGCGTTA 727
| |||||||||||||| | |||||| ||||| |||||| | ||| |||||| |||| |||
Sbjct 729 TTTGTTTTGATTTTACTAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCGTTTAGCTTTA 788
Query 728 GGGATCGTAAAT-ATAT-ATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGC 785
|||||| || || | || ||||| |||||||||||||| ||||||||||||||||
Sbjct 789 TTGATCGT-CATCAT-TCATGTGTGATTTTATCTTGTGTTAGTGAAGAGAAGCTTGCAGT 846
Query 786 TTTATTCCAG--C---G-CC-CTGAATCATACGAACTTTATTTTGAGATATGGATTACGA 838
|||||| ||| | | || || | | ||| || | || |||| ||||||||||| |
Sbjct 847 TTTATTTCAGTACAAGGACCACT-ACT-ATA-AAAATGTA-GTTGAAATATGGATTAC-A 901
Query 839 -CTAAGATTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATCGATACGGGACCT 897
||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 902 GCTAAGCTTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATAAATACGGGGCC- 960
Query 898 AAGGTAAATGTTCCAGGTAGTTTCTTGATTGACGAGGAGAAGAAAGTCTTCAT-GGGTTT 956
|| || | | | | |||||||| ||| ||||||| ||||||||| ||| ||||||
Sbjct 961 AAT-TATACA--C-ACG-AGTTTCTTCATTAACGAGGAAAAGAAAGTCGCCATCGGGTTT 1015
Score = 187 bits (101), Expect = 3e-46
Identities = 232/293 (79%), Gaps = 18/293 (6%)
Strand=Plus/Plus
Query 1372 AAGGGAAACACTTACTGGTGCGCTTATGAA-AGGAGCTTAAACGGTCACGAGC-ATCATA 1429
||||||||||| |||||||| || || ||| |||||| |||| | ||| |||| |
Sbjct 671 AAGGGAAACACATACTGGTGTGC-TAGGAAGAGGAGC---GGCGGTTA-TAGCGATCACA 725
Query 1430 TAATATGTTTTGATTTTACAAAAGAGAGGTTTGGACCGCTTCTGCCTCTGCCGTCTAGCA 1489
| || |||||||||||||| | |||||| |||||||||||| ||||| |||||| ||||
Sbjct 726 TTATTTGTTTTGATTTTACTAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCGTTTAGCT 785
Query 1490 TTACGGATCATGAAT-A-TAAAATCGTAACTTTATCGTGTGTTAAAGAAGAGAAGATTGC 1547
||| |||| | || | | | | || | |||||| ||||||| ||||||||| ||||
Sbjct 786 TTATTGATCGT-CATCATTCATGT-GTGATTTTATCTTGTGTTAGTGAAGAGAAGCTTGC 843
Query 1548 AGCTTTATTTTGGCACAAGG--CATC-A-TATGATACTG-AGATTGAGATATGGATTACA 1602
|| ||||||| | |||||| || | | ||| | | || || |||| ||||||||||||
Sbjct 844 AGTTTTATTTCAGTACAAGGACCA-CTACTATAAAAATGTAG-TTGAAATATGGATTACA 901
Query 1603 ACTAAGATTGAAGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGATTTAATAC 1655
||||| |||| ||||||||||||||||||||||||||||||||| | |||||
Sbjct 902 GCTAAGCTTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATAAATAC 954
> AT4G09452.1 | Symbols: | Pseudogene of AT2G38590; F-box family
protein | chr4:5985822-5986654 FORWARD LENGTH=833
Length=833
Score = 346 bits (187), Expect = 5e-94
Identities = 350/427 (82%), Gaps = 17/427 (4%)
Strand=Plus/Plus
Query 461 TGTTGAGGTTTTTAGATTATTTCTTCCATGCACCCGAAACACAAtttttttGGTATGAAA 520
|||||||||||||| ||||||||| | || |||||||||||| |||||||||||||||
Sbjct 167 TGTTGAGGTTTTTATATTATTTCTACAATACACCCGAAACAC-GGTTTTTTGGTATGAAA 225
Query 521 TCTACGATTTTGATTCTGGTTTA-TGGAAAACCCTTGATGTCACTCCAAACTGGGGTATA 579
|||| ||| || | || || | | |||| ||| |||||||||| |||| ||| |||||
Sbjct 226 TCTATGATGTTAACTC-GGGTGATTGGACAACTCTTGATGTCATTCCACGTTGGCGTATA 284
Query 580 TATTGTTCAAGCCCTAGCGTTTCTCTTAAGGGTAACACTTACTGGTGTGCTAGTAAAAGG 639
|||||||| ||||||||||||||||||||| || | ||| |||||||||| |||||||
Sbjct 285 TATTGTTCTTCCCCTAGCGTTTCTCTTAAGGGAAATAGTTATTGGTGTGCTAATAAAAGG 344
Query 640 AGCTCAGAAGGTTGTATGGATCATATAATATGTTTTGATTTTACAAAAGAGAGGTTTGGG 699
||||| |||||| | | | |||| ||||| | |||||||||||||| |||||| ||||||
Sbjct 345 AGCTCCGAAGGTAGCAAGAATCACATAATCTATTTTGATTTTACAAGAGAGAGATTTGGG 404
Query 700 CCGCTTCTACCTCTGCC--GTCTAGCG-T-TAG-GGATCG-TA-AATATATATATGTGAA 752
|||||||| ||||| || || | || | ||| || | || | || |||| |||||
Sbjct 405 CCGCTTCTGCCTCTACCAATTC-A-CGTTGTAGCTAATGGCTATACTA-ATATTTGTGAC 461
Query 753 TTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTATTCCAGCGCCCTGAATC-ATACG 811
|||||||||||||||||||||||| ||||| | |||||| |||| || |||| | ||||
Sbjct 462 TTTATCTTGTGTTAAAGAAGAGAAACTTGCGGTTTTATTTCAGCACCGTGAA-CGATAC- 519
Query 812 A-ACTTTATTTTGAGATATGGATTACGACTAAGATTGAGGCCGAAATGGTGTCGTGGAGC 870
| | | || ||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct 520 ATAGATGATCTTGAGATATAGATTACGACTAAGATTGAGGCCGAAATGGTGTTGAAGAGC 579
Query 871 AAGTTCT 877
|||||||
Sbjct 580 AAGTTCT 586
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 115 bits (62), Expect = 2e-24
Identities = 173/224 (77%), Gaps = 18/224 (8%)
Strand=Plus/Plus
Query 665 TAATATGTTTTGATTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCTAGCG 724
|||| |||||||||||||||| ||||| ||||| || ||||| |||||||||| ||| |
Sbjct 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
Query 725 TTAGGGATCGTAAATATAT-A-TATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGC 782
| ||| | |||| | | | | ||| ||||||||||||| |||||||||||||||
Sbjct 233 GT-GGG--C----ATAT-TGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGC 284
Query 783 AGCTTTA-TTCCAGCGCCCTGAATCATA-CGAACT-TTATTTTGAGATATGGATTACGAC 839
| |||| || |||| | ||||||| | | | | | | |||| ||| |||||||||
Sbjct 285 GGTTTTACTT-CAGCACGATGAATCAAATC-CA-TATGAGCTTGACTTATCGATTACGAC 341
Query 840 TAAGATTGAGGC-CGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 882
||||||||| | || | ||||| |||||||||||||||||||
Sbjct 342 CAAGATTGAGACTGGAGA-GGTGTTGTGGAGCAAGTTCTTGAGA 384
Score = 60.2 bits (32), Expect = 8e-08
Identities = 148/201 (74%), Gaps = 19/201 (9%)
Strand=Plus/Plus
Query 1804 ATTAACATCATTGGAGAGGCTGGATACTTAAAAATATTGGATCCCG--G-A--TTACCTA 1858
||||||||||||||||||||||||||||| | |||||||| || | | ||| |
Sbjct 493 ATTAACATCATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGA 552
Query 1859 -ACCAAA-ACCGTTGGCCACG-TGTGTGCTCTTATGTTCCAAGTTT-GATCCCAATCAAG 1914
|||||| | || | || | | |||||||||||||||||||||| | | | |||||||
Sbjct 553 GACCAAAGAT-GTAAGACA-GATCTGTGCTCTTATGTTCCAAGTTTAG-TGCAAATCAAG 609
Query 1915 AAACTTTCACGTGTGGGCAAAAATATAGAACAAAGT-AGTTTAGAAAAGCAACGATTTGA 1973
||| | | | | ||| ||| | |||| |||| | || || |||| |||| |||
Sbjct 610 CAACCTGAAGGAG-GGG-AAAGGGA-AGAAGAAAGCGAATTG-GAGAAGCTTCGATATGA 665
Query 1974 TCAAAACA-GTTCGAGACTTG 1993
| |||||| || |||||||||
Sbjct 666 TGAAAACATGT-CGAGACTTG 685
> AT2G18320.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:7956220-7957531 FORWARD LENGTH=321
Length=321
Score = 60.2 bits (32), Expect = 8e-08
Identities = 34/35 (97%), Gaps = 0/35 (0%)
Strand=Plus/Plus
Query 1701 TTTCTTCATTGATGAAGAGAAGAAAGTCTTCATGG 1735
||||||||||||||||||||||||||||||| |||
Sbjct 147 TTTCTTCATTGATGAAGAGAAGAAAGTCTTCGTGG 181
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103362922155
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5