BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg345668
Length=1761
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38910.1 | Symbols: CPK20 | calcium-dependent protein kinase... 2872 0.0
AT3G10660.1 | Symbols: CPK2, ATCPK2 | calmodulin-domain protein... 636 0.0
AT4G09570.1 | Symbols: CPK4, ATCPK4 | calcium-dependent protein... 331 1e-89
> AT2G38910.1 | Symbols: CPK20 | calcium-dependent protein kinase
20 | chr2:16245214-16247483 REVERSE LENGTH=1752
Length=1752
Score = 2872 bits (1555), Expect = 0.0
Identities = 1695/1762 (96%), Gaps = 11/1762 (1%)
Strand=Plus/Plus
Query 1 ATGGGAAACACATGCGTGGGTCCGAATCTGAACCCTAATGGATTCCTTCAATCCGTTAGT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGAAACACATGCGTGGGTCCGAATCTGAACCCTAATGGATTCCTTCAATCCGTTAGT 60
Query 61 GCTGCTGTGTGGCGGAATCAGAAACCAGACGATAGCCTTAAGAGCAGCAAAGATGAGAGC 120
||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct 61 GCTGCCGTGTGGCGGAATCAGAAACCAGACGATAGCATTAAGAGCAGCAAGGACGAGAGC 120
Query 121 AGTCGAAAAAAGAACGATAAGAGCGTTAATGGCGACGATAGTAACCCTCACGTTTCCTCC 180
|||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||
Sbjct 121 AGTCGAAAAAAGAACGATAAAAGCGTTAATGGCGACGACAGTAACGGTCACGTTTCCTCC 180
Query 181 ACCGTGGATCCAGCACAACCCACGTTGCCAACACCAAGCACGCCACCACCTCAGGTGAAA 240
|||||||||||||||| | |||||||||||||||| ||||| |||||||||| |||||||
Sbjct 181 ACCGTGGATCCAGCACCATCCACGTTGCCAACACCGAGCACACCACCACCTCCGGTGAAA 240
Query 241 ATGGCCAACGAAGAACCACCACCAAAACCTATCCCAGAGAACAAAATCGTCGAAGAAGAT 300
||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct 241 ATGGCCAACGAAGAACCACCACCAAAACCTATCACAGAGAAC---A------AAGAAGAT 291
Query 301 GCAAATTC-AAAGCCACAGAAGAAAGAAGCCCACATGAAACGTATGGCAAGCGCAGGTCT 359
| ||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 292 CCGAATTCGAAA-CCGCAGAAGAAAGAAGCGCACATGAAACGTATGGCAAGCGCAGGTCT 350
Query 360 ACAAATAGACTCAGTTCTTGGGAGAAAAACAGAGAATCTCAAAGATATATACAGTGTTGG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 ACAAATAGACTCAGTTCTTGGGAGAAAAACAGAGAATCTCAAAGATATATACAGTGTTGG 410
Query 420 GAGAAAATTAGGTCAAGGACAATTTGGAACAACGTTTCTTTGCGTGGATAAGAAGACAGG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 GAGAAAATTAGGTCAAGGACAATTTGGAACAACGTTTCTTTGCGTGGATAAGAAGACAGG 470
Query 480 TAAAGAATTCGCTTGCAAAACGATAGCTAAGAGGAAACTAACAACACCTGAGGATGTTGA 539
|||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 471 TAAAGAGTTCGCTTGTAAAACGATAGCTAAGAGGAAATTAACAACACCTGAGGATGTTGA 530
Query 540 AGATGTGAGAAGAGAGATTCAGATAATGCATCATTTGTCTGGTCATCCAAACGTGATTCA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 AGATGTGAGAAGAGAGATTCAGATAATGCATCATTTGTCTGGTCATCCAAACGTGATTCA 590
Query 600 GATAGTTGGTGCGTATGAAGATGCAGTAGCTGTTCATGTTGTGATGGAGATTTGTGCAGG 659
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 GATCGTTGGTGCGTATGAAGATGCAGTAGCTGTTCATGTTGTGATGGAGATTTGTGCAGG 650
Query 660 TGGAGAGTTATTTGATAGGATTATACAGAGAGGACATTATACTGAGAAAAAAGCTGCTGA 719
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 651 TGGAGAGTTATTTGATAGGATTATACAGAGAGGGCATTATACTGAGAAAAAAGCTGCTGA 710
Query 720 GCTTGCTAGGATCATTGTTGGTGTTATAGAAGCTTGTCATTCTTTAGGTGTGATGCACCG 779
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 711 GCTTGCTAGGATCATTGTTGGTGTTATAGAAGCTTGTCATTCTTTAGGTGTAATGCACCG 770
Query 780 TGATCTTAAGCCTGAGAATTTCTTGTTTGTTAGTGGAGATGAAGAAGCTGCTCTCAAGAC 839
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 771 TGATCTTAAGCCTGAGAATTTTTTATTTGTTAGTGGAGATGAAGAAGCTGCTCTCAAGAC 830
Query 840 TATTGATTTTGGTCTCTCTGTCTTCTTTAAACCAGGAGAAACATTCACTGATGTAGTTGG 899
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 831 TATTGATTTTGGCCTCTCTGTTTTCTTTAAACCAGGAGAAACATTCACTGATGTCGTTGG 890
Query 900 GAGTCCTTATTATGTGGCACCAGAAGTTTTAAGGAAACATTATAGTCATGAATGTGATGT 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 TAGTCCTTATTATGTGGCACCAGAAGTTTTAAGGAAACATTATAGTCATGAATGTGATGT 950
Query 960 TTGGAGTGCTGGAGTTATTATATACATTTTACTAAGTGGTGTTCCTCCGTTTTGGGATGA 1019
||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 951 TTGGAGTGCCGGAGTTATTATTTACATTTTACTAAGTGGCGTCCCTCCGTTTTGGGATGA 1010
Query 1020 AACGGAACAGGGGATCTTTGAGCAGGTTTTGAAAGGTGACCTTGATTTTATATCAGAACC 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 AACGGAACAGGGGATCTTTGAGCAGGTTTTGAAAGGTGACCTTGATTTTATATCAGAACC 1070
Query 1080 ATGGCCTAGTGTATCAGAAAGTGCTAAAGATTTGGTCCGTCGGATGCTAATCAGAGACCC 1139
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1071 ATGGCCTAGTGTATCAGAAAGTGCCAAGGATTTGGTCCGTCGGATGCTAATCAGAGACCC 1130
Query 1140 TAAGAAGCGAATGACTGCTCATGAAGTTCTCTGTCATCCTTGGGCCAGAGTAGATGGTGT 1199
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1131 TAAGAAGCGAATGACTACTCATGAAGTTCTCTGTCATCCATGGGCCAGAGTAGATGGTGT 1190
Query 1200 TGCTCTTGATAAACCTCTTGATTCTGCTGTCCTTAGTCGTTTGCAACAGTTTTCAGCCAT 1259
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1191 TGCTCTTGATAAACCTCTTGATTCTGCTGTCCTAAGTCGTTTGCAACAATTTTCAGCCAT 1250
Query 1260 GAACAAGCTCAAGAAAATTGCTATCAAGGTAATAGCAGAGAGCTTGTCAGAGGAAGAGAT 1319
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1251 GAACAAGCTCAAGAAAATAGCTATCAAGGTAATAGCAGAAAGCTTGTCAGAGGAAGAAAT 1310
Query 1320 AGCAGGATTGAAGGAAATGTTCAAGATGATAGATACAGACAATAGTGGACACATCACTCT 1379
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1311 AGCAGGATTGAAGGAAATGTTCAAGATGATAGATACAGATAATAGTGGACACATCACTCT 1370
Query 1380 AGAAGAACTCAAGAAAGGTTTAGACAGAGTTGGTGCTGACCTTAAAGATTCAGAAATATT 1439
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 1371 CGAAGAACTCAAGAAAGGTTTGGACAGAGTTGGTGCTGACCTTAAAGATTCAGAAATACT 1430
Query 1440 AGGATTAATGCAGGCAGCGGATATAGATAACAGTGGGACTATAGACTATGGAGAGTTTAT 1499
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1431 AGGATTAATGCAAGCAGCGGATATAGATAACAGTGGGACAATAGACTATGGAGAGTTTAT 1490
Query 1500 AGCAGCGATGGTGCATTTGAACAAAATAGAGAAAGAAGACCATTTGTTCACAGCATTCTC 1559
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 AGCAGCAATGGTGCATTTGAACAAAATAGAGAAAGAAGACCATTTGTTCACAGCATTCTC 1550
Query 1560 TTATTTTGACCAAGATGGAAGTGGTTATATAACCAGAGACGAGCTCCAACAAGCTTGCAA 1619
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 TTACTTTGACCAAGATGGAAGTGGTTATATAACCAGAGACGAGCTCCAACAAGCTTGCAA 1610
Query 1620 GCAATTTGGCTTAGCGGATGTTCATTTGGACGACATTTTACGCGAAGTCGATAAGGACAA 1679
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1611 GCAATTTGGCTTAGCGGATGTTCATTTAGACGACATTTTACGCGAAGTCGATAAAGACAA 1670
Query 1680 CGATGGAAGAATAGATTACAGCGAGTTCGTGGATATGATGCAAGACACTGGTTTTGGCAA 1739
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1671 CGATGGAAGAATAGACTACAGCGAGTTTGTGGATATGATGCAAGACACTGGTTTTGGCAA 1730
Query 1740 AATGGGTCTAAAGGTGAGTTGA 1761
||||||| ||||||||||||||
Sbjct 1731 AATGGGTTTAAAGGTGAGTTGA 1752
> AT3G10660.1 | Symbols: CPK2, ATCPK2 | calmodulin-domain protein
kinase cdpk isoform 2 | chr3:3331398-3334268 REVERSE LENGTH=2142
Length=2142
Score = 636 bits (344), Expect = 0.0
Identities = 1022/1342 (76%), Gaps = 76/1342 (6%)
Strand=Plus/Plus
Query 418 GGGA-GAAAATTAGGTCAAGGACAATTTGGAACAACGTTTCTT-TGCGTGGATAAGAAG- 474
|||| |||| || || ||||| |||||||| || |||||| || ||| | || || | |
Sbjct 565 GGGAGGAAACTT-GGACAAGGGCAATTTGGGACGACGTTT-TTATGCCTTGAGAA-AGGT 621
Query 475 ACAGGTAAAGAAT-TCGCTTGCAAAACGATAGCTAAGAGGAAACTAACAACACCTGAGGA 533
|| || || |||| | || ||||| |||| | |||||||| || || ||||||
Sbjct 622 ACTGGGAACGAATAT-GCGTGCAAGTCGATTTCCAAGAGGAAGCTTTTGACTGATGAGGA 680
Query 534 TGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCATTTGTCTGGTCATCCAAACGT 593
||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || ||
Sbjct 681 TGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCACTTGGCTGGTCATCCGAATGT 740
Query 594 GAT-TCAGAT-AGTTGGTGCGTATGAAGATGCAGTAGCTGTTCATGTTGTGATGGAGATT 651
|| || || | ||||| ||||| |||| || || || ||| ||||||||||| ||
Sbjct 741 TATATCT-ATTAAA-GGTGCTTATGAGGATGTTGTTGCGGTACATCTTGTGATGGAG-TT 797
Query 652 -TGTGCAGGTGGAGAG-TTATTTGATAGGATTATACAGA-GAGGACATTATACTGAGAAA 708
||| | ||||| ||| || |||||||| ||||| || | | |||||||| |||||||
Sbjct 798 GTGTTCGGGTGGCGAGCTT-TTTGATAGAATTATTCA-ACGTGGACATTACACTGAGAGG 855
Query 709 AAAGCTGCTGAGCTTGCTAGGATCATTGTTGGTGTTATAGAAGCTTGTCATTCT-TTAGG 767
||||||||||||||||| || | ||||||||| ||| |||| |||||||| ||| || ||
Sbjct 856 AAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCTTGTCACTCTCTT-GG 914
Query 768 TGTGATGCACCGTGATCTTAAGCCTGAGAATTT-CTTGTTTGTTAGTGGAGATGAAGAAG 826
||| ||||| || || || ||||| |||||||| || ||||||||| |||| |||||
Sbjct 915 TGTTATGCATCGGGACCTCAAGCCAGAGAATTTTCTA-TTTGTTAGTAGAGAGGAAGATT 973
Query 827 CTGCTCTC-AAGACTATTGATTTTGGTCTCTCTGTCTTCTTTAAACCAGGA-GAAACATT 884
| || | || || || || ||||| ||||| | |||||||| |||| | || ||
Sbjct 974 CC-CTGTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTTAAGCCAG-ATGAGGTTTT 1031
Query 885 CACTGATGTAGTTGGGAGTCCTTATTATGTGGCACCAGAAGTT-TTAAGGAAA-CATTAT 942
|| ||||| ||||| ||||| |||||||| || ||||||||| ||| | ||| | ||||
Sbjct 1032 TACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTTCTTA-G-AAAGCGTTAT 1089
Query 943 AGTCATGAATGTGATGTTTGGAGTGCTGGAGTTATTATATACATTTTACTAAGTGGTGTT 1002
||| ||||| ||||| ||||||||||| || ||| | |||||||| |||| || |||
Sbjct 1090 GGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATTTTGTTAAGCGGAGTT 1149
Query 1003 CCTCCGTTT-TGGGATGAAACGGAACAGGGGATCTTT-GAGCAGGTT-TTGAAAGGTGAC 1059
||||| ||| |||| ||||| ||||| || || ||| |||||||| || | || ||
Sbjct 1150 CCTCC-TTTCTGGGCCGAAACCGAACAAGGTAT-TTTCGAGCAGGTCCTTCAT-GGAGAT 1206
Query 1060 CTTGA-TTTTATATCAGAACCATGGCCTAGTGTATCAGAAAGTGCTAAAGATTTGGTCCG 1118
||||| |||| ||| || |||||||| || | || ||||| || ||||| ||||| |
Sbjct 1207 CTTGACTTTTC-ATCTGATCCATGGCCAAGCATCTCTGAAAGCGCGAAAGACTTGGTAAG 1265
Query 1119 TCGGATGCTAAT-CAGAGACCCTAAG--AAGCGAATGACTGCTCATGAAGT-TCTCTGTC 1174
||||| | | ||||||| ||| ||| | | || || ||| |||| | | ||||
Sbjct 1266 GAAAATGCTTGTTC-GAGACCCCAAGCGAAG--ACTAACCGCACATCAAGTAT-TATGTC 1321
Query 1175 ATCCTTGGGC-CAGAGTAGATGGTGTTGCTCTTGATAAACCTCTTGATTCTGCTGTCCTT 1233
|||| |||| |||| | || ||||| |||| ||||||||||| || |||||||| ||
Sbjct 1322 ATCCATGGGTACAGATT-GACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCTGTTCTG 1380
Query 1234 AGTCGTTTGCAA-CAGTTTTCAGCCATGAACAAGCTCAAGAAAATTGCTATCA-AGGTAA 1291
|| ||| || || || ||||| || ||||||||| |||||||||| ||| | | || | |
Sbjct 1381 AGCCGTATG-AAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGAG-TCA 1438
Query 1292 TAGCAGAGAGCTTGTCAGAGGAAGAGATAGCAGGATTGAAGGAAATGTTCAAGATGATAG 1351
|||| |||||||| || || ||||| ||||| || || || ||||||||||||||||||
Sbjct 1439 TAGCTGAGAGCTTATCTGAAGAAGAAATAGCCGGTTTAAAACAAATGTTCAAGATGATAG 1498
Query 1352 ATACAGACAATAGTGGACACATCACTCTAGAAGAACTCAA-GAAAGGTTTAGA-CAGAGT 1409
| ||||||||||||| || |||||| | |||||||| || | | || || | | ||||
Sbjct 1499 ACGCAGACAATAGTGGTCAGATCACTTTTGAAGAACTGAAAGCA-GGACTAAAAC-GAGT 1556
Query 1410 TGGTGCTGACCTTAAAGATTCAGAAATA-TTAGGAT-TAATGCAGGCAGCGGATATAGAT 1467
|||||| | || ||||| ||||| || || | || ||||||| || || ||| | ||
Sbjct 1557 TGGTGCCAATCTCAAAGAGTCAGAGATTCTT-G-ATCTAATGCAAGCTGCTGATGTGGAC 1614
Query 1468 AACAGTGGGACTATAGACTATGGAGAGTTTATAGCAGCGATGGTGCATTTGAACAAAATA 1527
|| || || || |||||||| |||||| ||||| || | ||||| | |||||||||
Sbjct 1615 AATAGCGGAACGATAGACTACAAAGAGTTCATAGCCGCCACATTGCATCTAAACAAAATA 1674
Query 1528 GAGAAAGAAGACCATTTGTTCACAGCATTCTCTTATTTTGACCAAG-ATG-GAAGTGG-T 1584
|||| ||| |||||||||||| | || |||||||| |||||| ||| | | || |||| |
Sbjct 1675 GAGAGAGAGGACCATTTGTTCGCCGCCTTCTCTTACTTTGAC-AAGGACGAGA-GTGGCT 1732
Query 1585 TATATAACCA-GAGACGAGCTCCAACAAGCTTGC-AAGCAATTTGGC-TTAGCGGATGTT 1641
| ||| ||| | |||||||| |||||||||||| ||| | ||||| || | ||||
Sbjct 1733 T-TATCACCCCG-GACGAGCTTCAACAAGCTTGCGAAG-AGTTTGGTGTT-GAAGATGCC 1788
Query 1642 CATTTGGACGACATTTTACGCGAAGTCGAT-AAGGACAACGATGGAAGAATAGATTACAG 1700
| | || || || | ||||| || ||| ||| |||| |||||| ||||||| ||||
Sbjct 1789 CGCATAGAAGAAATGATGCGCGATGTTGATCAAG-ACAAGGATGGACGAATAGACTACAA 1847
Query 1701 CGAGTTCGTGG-ATATGATGCA 1721
|||||| |||| | ||||||||
Sbjct 1848 CGAGTTTGTGGCA-ATGATGCA 1868
> AT4G09570.1 | Symbols: CPK4, ATCPK4 | calcium-dependent protein
kinase 4 | chr4:6049517-6052335 FORWARD LENGTH=1700
Length=1700
Score = 331 bits (179), Expect = 1e-89
Identities = 828/1127 (73%), Gaps = 102/1127 (9%)
Strand=Plus/Plus
Query 553 GAGATTCAGATAATGCATCATTTGTCTG-GTCATCCAAACG-TGATTCAG-AT--AGTTG 607
||||||||||| ||||||||| | |||| | ||||| || | || || || || || |
Sbjct 260 GAGATTCAGATCATGCATCATCTCTCTGAG-CATCCTAATGTTG-TT-AGAATCAAG--G 314
Query 608 GTGCGTATGAAGA-TGCAGTAGCTGTTCATGTTGTGATGG-AGATTTGTGCAGGTGGAGA 665
|| | |||||||| | | || |||||| |||| |||| || |||||| |||||| ||
Sbjct 315 GTACTTATGAAGACT-CTGTTTTTGTTCACATTGTTATGGAAG-TTTGTGAAGGTGGTGA 372
Query 666 G-TTATTTGATAGGATT-ATACAGAGAGGACATTATACTGAGA-AAAAAGCTGCTGAGCT 722
| || |||||| ||||| | | | ||| || || ||| | |||||||| || |
Sbjct 373 GCTT-TTTGATCGGATTGTTTC-TAAAGGGTGTTTTAGTGA-ACGTGAAGCTGCTAAG-T 428
Query 723 TG-CTAGGATC-ATTGTTGGTGTTATAGAAGCTTGTCATTCT-TTAGGTGTGATGCACCG 779
|| || || | ||| |||||||| | || |||||||||||| || ||||| ||||| |
Sbjct 429 TGATTAAGA-CTATTCTTGGTGTTGTTGAGGCTTGTCATTCTCTT-GGTGTTATGCATAG 486
Query 780 TGATCTTAAGCCTGAGAATTTCTTGTTTGTTAGTGG-AGATGAAGAAGCT--GCTCTCAA 836
|||||||||||||||||||||||||||| |||| || ||| || ||| ||| | ||
Sbjct 487 AGATCTTAAGCCTGAGAATTTCTTGTTTGATAGTCCCAG-TGATGATGCTAAGCT-TAAA 544
Query 837 GACTATTGATTTTGGTCTCTCTGTCTTCTTTAAACCAGG--AGAAACAT-TCACTGATGT 893
| ||| || |||||| | |||||||||| || ||||| || | | | | | ||||||
Sbjct 545 G-CTACAGACTTTGGTTTGTCTGTCTTCTACAAGCCAGGGCAGTATC-TGT-A-TGATGT 600
Query 894 AGTTGGGAGTCCTTATTATGTGGCACCAGAAGTTTT-AAGGAAACATTATAGTC-ATGA- 950
|||||| ||||| |||||||| ||||| || ||| | ||| ||| |||| | | | ||
Sbjct 601 AGTTGGAAGTCCGTATTATGTTGCACCTGAGGTTCTGAAG-AAATGTTATGGACCA-GAG 658
Query 951 ATGTGATGTTTGGAGTGCTGGAGTTAT-TATATACATTTTACTAAGTGGTGTTCCTCCGT 1009
|| || || ||||| || || ||||| | | ||||| ||||||||||| |||||||| |
Sbjct 659 ATA-GACGTGTGGAGCGCCGGTGTTATCT-TGTACATCTTACTAAGTGGGGTTCCTCCTT 716
Query 1010 TTTGGG-ATGAAACGGAA-CAGGGGATCTTTGAG-CAGGTTTTGAAAGGTGACCTT-GAT 1065
|||||| | ||||| || |||| |||||| || ||| | ||| |||| || | |||
Sbjct 717 TTTGGGCA-GAAACCGAGTCAGGA-ATCTTT-AGGCAGATATTGCAAGG-GAAGATAGAT 772
Query 1066 TTTATATCAGAACCATGGCCTAGTGTATCAGAAAGTGCTAAAGATTTGGTCCGTCGGA-T 1124
|||| ||| || || ||||||| | | |||||| |||||||||||||| | | | |
Sbjct 773 TTTAAATCTGATCCGTGGCCTACTATCTCAGAAGGTGCTAAAGATTTGATTTA-CAAAAT 831
Query 1125 GCTA-ATCAG-AGACCCTAAGAAGCGAATGACTGCTCATGAAGT-TCTCTGTCATCCTTG 1181
||| || || || ||| ||||| || || |||| ||||||| | | ||||| |||||
Sbjct 832 GCTCGAT-AGGAGCCCC-AAGAAACGTATTTCTGCACATGAAGCAT-TGTGTCACCCTTG 888
Query 1182 GGCCAGAGTAGATGG---TGTTGCTCTTGATAAACCTCTTGATTCTGCTGTCCTTAGTCG 1238
| | || |||| || ||| | || || ||||| || | || ||| || ||||
Sbjct 889 G---ATTGTTGATGAACATGCTGCACCAGACAAGCCTCTCGACCCAGCAGTC-TT-GTCG 943
Query 1239 T---TTGCAA-CAGTTTTCAGCCA-TGAACAAGCTCAAGAAAATTGC-T-ATCAAGGTAA 1291
|| || ||||| || || | |||| || |||||||||| || | | | || |||
Sbjct 944 CGACTT--AAGCAGTTCTC-GCAAATGAATAAAATCAAGAAAATGGCCTTA-CGAG-TAA 998
Query 1292 TAGCAGAGAG-CTTGTCAGAGGAAGAGATAGCAGGAT-TGAAGGAAATGTTCAAGATGAT 1349
| || ||||| || || ||||||||||| | || | |||||||| ||||||| |||||
Sbjct 999 TCGCGGAGAGACTC-TCGGAGGAAGAGATTGGTGG-TCTGAAGGAATTGTTCAAAATGAT 1056
Query 1350 AGATACAGACAATAGTGGACACA-TCAC-TCTAGAAGAACTCAA-GAAAGGTTTAGACAG 1406
|||||||||||| |||||| ||| |||| | | ||||| || || | | ||| || | ||
Sbjct 1057 AGATACAGACAACAGTGGA-ACAATCACCTTT-GAAGAGCTTAAAGCA-GGTCTAAAGAG 1113
Query 1407 AGTTGG-TGCTGACCTTAAAG-ATTCAGAAAT-ATTAGGAT-TAATGCAGGCAGCGGATA 1462
|||||| | |||| || | | | |||||||| | || | | ||| | || |||||||
Sbjct 1114 AGTTGGAT-CTGAA-TTGATGGAATCAGAAATCA--AGTCTCTTATGGATGCGGCGGATA 1169
Query 1463 TAGATAACAGTGGGACTATAGACTATGGAGAGTTTATAGCAGCGATGGTGCATTTGAACA 1522
|||| ||||||||||| |||||||| || || || ||||||||| | ||| | ||||
Sbjct 1170 TAGACAACAGTGGGACAATAGACTACGGTGAATTCCTAGCAGCGACATTACATATAAACA 1229
Query 1523 AAATAGAGAAAGAAGACCATTTGTTCACAGCATTCTCTTATTTTGACCAAGATGGAAGTG 1582
| || |||| |||||| | ||| | || || || || ||||| ||||||| || |
Sbjct 1230 AGATGGAGAGAGAAGAGAACTTGGTGGTTGCGTTTTCATACTTTGATAAAGATGGTAGCG 1289
Query 1583 GTTATATAACCAGAGACGAGCTCCAACAAGCTTGCA-AGCAATTTGG 1628
||||||| |||| |||||||| |||||||| |||| || | |||||
Sbjct 1290 GTTATATCACCATTGACGAGCTTCAACAAGCCTGCACAG-AGTTTGG 1335
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87097945575
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5