BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg346360
Length=1536
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45510.1 | Symbols: CYP704A2 | cytochrome P450, family 704, ... 2427 0.0
AT2G44890.1 | Symbols: CYP704A1 | cytochrome P450, family 704, ... 2061 0.0
> AT2G45510.1 | Symbols: CYP704A2 | cytochrome P450, family 704,
subfamily A, polypeptide 2 | chr2:18753074-18755172 FORWARD
LENGTH=1775
Length=1775
Score = 2427 bits (1314), Expect = 0.0
Identities = 1465/1539 (95%), Gaps = 6/1539 (0%)
Strand=Plus/Plus
Query 1 ATGGAGATTTTGACGAGCATAGCTATTACAATAGCAACAACGATCTTCATCGTTTTGTCT 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 12 ATGGAGATTTTGACGAGCATAGCTATTACAGTAGCAACAACGATCTTCATCGTTTTGTGT 71
Query 61 TTCACCATCTATCTCACGATCAGAATCTTTACCGGAAAATCAAGAAACGACAAGAGATAT 120
||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 72 TTCACTATCTATCTTATGATCAGAATCTTTACCGGGAAATCAAGAAACGACAAGAGATAT 131
Query 121 GCTCCAGTACATGCCACGGTCTTTGATCTTCTCTTCCACAGGGACGAATTATACGATTAC 180
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 132 GCTCCAGTGCATGCCACGGTCTTTGATCTTCTCTTCCACAGCGACGAGTTATACGATTAC 191
Query 181 GAGACAGAGATCGCGAGAACA-AAGCCGACTTATAGGTTCTTAAGTCCAGGACAGAGCGA 239
||||||||||||||||| | | ||||||||||| ||||| || |||||||||||||||||
Sbjct 192 GAGACAGAGATCGCGAG-AGAGAAGCCGACTTACAGGTTTTTGAGTCCAGGACAGAGCGA 250
Query 240 GATATTAACTGCTGATCCTCGGAACGTGGAGCATATTCTCAAGACAAGATTCGATAACTA 299
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 251 GATATTAACTGCAGATCCTCGTAACGTGGAGCATATTCTCAAGACAAGATTCGATAACTA 310
Query 300 TAGTAAAGGAC-CTGCTGGTAGAGAGAATCTGGCGGATCTTTTAGGACATGGGATCTTTG 358
||||||||||| | | | ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 311 TAGTAAAGGACACAG-TAGTAGAGAGAATATGGCGGATCTTCTAGGACATGGGATCTTTG 369
Query 359 CTGTTGATGGAGAGAAATGGAGACAACAAAGGAAGCTTGCGAGCTTTGAGTTCTCTACTA 418
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 370 CTGTTGATGGAGAGAAATGGAGACAACAGAGGAAGCTTTCGAGCTTTGAGTTCTCTACTA 429
Query 419 GAGTTTTAAGAGATTTTAGCTGCTCTGTTTTTAGGAGAAATGCATCTAAGCTTATTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 430 GAGTTTTAAGAGATTTTAGCTGCTCTGTTTTTAGGAGAAATGCATCTAAGCTTGTTGGTT 489
Query 479 TTGTCTCGGAGTTTGCTCTCTCTGGAAAAGCTTTTGATGCTCAAGATATGTTGATGAGAT 538
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 490 TTGTCTCGGAGTTTGCTCTCTCTGGAAAAGCTTTTGATGCTCAAGATTTGTTGATGAGAT 549
Query 539 GTACATTGGACTCCATCTTTAAAGTTGGGTTTGGTGTGGAGTTAAAATGTTTGGATGGGT 598
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 GTACACTGGACTCCATCTTTAAAGTTGGGTTTGGTGTGGAGTTAAAATGTTTGGATGGGT 609
Query 599 TTAGCAAAAAAGGGGAAGAGTTTATGGAGGCTTTTGATGAAGGTAACGTTGCAACTAGTT 658
|||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 610 TTAGCAAAGAAGGGCAAGAGTTTATGGAAGCTTTTGATGAAGGTAACGTTGCAACTAGTT 669
Query 659 CCAGATACATCGATCCACTTTGGAAGCTGAAATGGTTTCTCAACATTGGATCACAATCTA 718
|||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 670 CCAGATTCATCGATCCTCTTTGGAAGCTGAAATGGTTTTTCAACATTGGATCACAATCTA 729
Query 719 AACTCAAGAAGAGTATTGCTACTATAGATAAATTTGTCTATAGTCTCATTACCACAAAAA 778
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 730 AGCTCAAGAAGAGCATTGCTACTATAGATAAATTTGTCTATAGTCTCATTACCACTAAAA 789
Query 779 GGAAAGAGCTTGCTAAGGAACAGAACACTGTTGTTAGAGAGGACATACTATCGAGATTTC 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 790 GGAAAGAGCTTGCTAAGGAACAGAACACTGTTGTTAGAGAGGACATACTATCGAGATTCC 849
Query 839 TAGTGGAGAGTGAGAAAGATCCGGAGAACATGAATGATAAGTACCTGAGAGATATAATTC 898
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 850 TAGTGGAGAGTGAGAAAGATCCGGAGAACATGAATGATAAGTACCTGAGGGATATAATTC 909
Query 899 TGAACTTTATGATTGCTGGTAAGGACACAACCGCTGCATC-ACTTTCTTGGTTCTTGTAC 957
||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct 910 TGAACTTCATGATTGCTGGTAAGGACACAACCGCTGCA-CTACTCTCTTGGTTCTTGTAC 968
Query 958 ATGCTCTGCAAAAACCCACTTGTTCAGGAGAAAATCGTTCAAGAAATCAGAGATGTGACA 1017
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 969 ATGCTCTGCAAAAACCCACTTGTTCAGGAGAAAATCGTACAAGAAATCAGAGATGTGACA 1028
Query 1018 TCAAGTCACGAGAAAACAACCGACGTAAATGGTTTCATTGAAAGTATTAACGAAGAGGCT 1077
| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1029 TTTAGTCACGAGAAAACGACCGATGTAAATGGTTTCGTTGAAAGTATTAACGAAGAGGCT 1088
Query 1078 CTTGATCAGATGCAGTATCTCCATGCAGCCTTGTCTGAGACCTTGAGGCTTTACCCTCCT 1137
|||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1089 CTTGATGAGATGCACTACCTCCATGCAGCCTTGTCTGAGACCTTGAGGCTCTACCCTCCT 1148
Query 1138 GTGCCTGTGGACACGAGATATGCAGAAAATGATGACATTCTTCCAGATGGACATAGAGTG 1197
||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||
Sbjct 1149 GTGCCTGTGGACATGAGGTGTGCAGAAAATGATGACGTTCTTCCAGATGGACATAGAGTG 1208
Query 1198 AGCAAAGGGGATAATATCTACTACATAGCCTATGCAATGGGTAGGATGACTTACATTTGG 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 AGCAAAGGGGATAATATCTACTACATAGCCTATGCAATGGGTAGGATGACTTACATTTGG 1268
Query 1258 GGACAAGATGCTGAGGAATTCAAGCCAGAGAGATGGCTTAAGGACGGCGTGTTCCAACCC 1317
|| ||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct 1269 GGTCAAGATGCTGAAGAATTCAAGCCAGAGAGATGGCTCAAGGACGGCTTATTCCAACCC 1328
Query 1318 GAATCACCATTCAAATTTATAAGCTTTCATGCTGGTCCAAGAATCTGTCTTGGCAAGGAT 1377
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 GAATCACCATTCAAATTCATAAGCTTTCATGCTGGTCCAAGAATCTGTCTTGGCAAGGAT 1388
Query 1378 TTCGCATACCGGCAAATGAAGATAGTAGCAATGGCACTTCTTCACTTCTTTCGCTTCAAA 1437
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1389 TTCGCATACCGGCAGATGAAGATAGTATCAATGGCACTTCTTCACTTCTTTCGCTTCAAA 1448
Query 1438 ATGGCTGATGAGAAGAGCAATGTGTGTTACAAGACAATGCTTACACTTCATGTCGAAGGA 1497
|||||||||||||| ||||| |||| |||||||| ||||||||| ||||||||||| |||
Sbjct 1449 ATGGCTGATGAGAACAGCAAGGTGTATTACAAGAGAATGCTTACTCTTCATGTCGATGGA 1508
Query 1498 GGACTCCATCTATGCGCAATTCCGAGGACAAGCACTTGA 1536
||||||||||| || ||||| ||||||||||||||||||
Sbjct 1509 GGACTCCATCTCTGTGCAATCCCGAGGACAAGCACTTGA 1547
> AT2G44890.1 | Symbols: CYP704A1 | cytochrome P450, family 704,
subfamily A, polypeptide 1 | chr2:18508392-18510308 REVERSE
LENGTH=1536
Length=1536
Score = 2061 bits (1116), Expect = 0.0
Identities = 1405/1545 (91%), Gaps = 18/1545 (1%)
Strand=Plus/Plus
Query 1 ATGGAGATTTTGACGAGCATAGCTATTACAATAGCAACAACGATCTTCATCGTTTTGTCT 60
|||||||||||||||||||| || |||| | ||| |||||||||||||||| || |||||
Sbjct 1 ATGGAGATTTTGACGAGCATGGCGATTATAGTAGTAACAACGATCTTCATCCTTCTGTCT 60
Query 61 TTCACCA-TCTATCTCACGATCAGAATCTTTACCGGAAAATCAAGAAACGACAAGAGATA 119
||| || ||||||| || ||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 61 TTC-GCACTCTATCTAACTATCAGAATCTTCACCGGAAAATCCAGAAACGACAAGAGGTA 119
Query 120 TGCTCCAGTACATGCCACGGTCTTTGATCTTCTCTTCCACAGGGACGAATTATACGATTA 179
| |||| ||||| ||||| ||||||||||| |||||||||| || |||||||||||||
Sbjct 120 TACTCCTGTACACGCCACAATCTTTGATCTTTTCTTCCACAGCCACAAATTATACGATTA 179
Query 180 CGAGACAGAGATCGCGAGAACAAAGCCGACTTAT-AGGTTCTTAAGTCCAGGACAGAGCG 238
|||||||||||||||||| |||||||| |||| | |||||||| ||||||||||||||||
Sbjct 180 CGAGACAGAGATCGCGAGGACAAAGCCTACTT-TCAGGTTCTTGAGTCCAGGACAGAGCG 238
Query 239 AGATATTAACTGCTGATCCTCGGAACGTGGAGCATATTCTCAAGACAAGATTCGATAACT 298
||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 239 AGATATTCACTGCAGATCCTCGGAACGTGGAGCATATTCTCAAGACAAGATTCCATAACT 298
Query 299 ATAGTAAAGGACCTGCTGGTAGAGAGAATCTGGCGGATCTTTTAGGACATGGGATCTTTG 358
||||||||||||| | ||||| || |||||| ||||||||| | |||||||||||||| |
Sbjct 299 ATAGTAAAGGACCCGTTGGTACAGTGAATCTTGCGGATCTTCTGGGACATGGGATCTTCG 358
Query 359 CTGTTGATGGAGAGAAATGGAGACAACAAAGGAAGCTTGCGAGCTTTGAGTTCTCTACTA 418
||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||
Sbjct 359 CTGTTGATGGAGAGAAATGGAAACAACAAAGGAAGCTCGTGAGCTTTGAGTTCTCCACTA 418
Query 419 GAGTTTTAAGAGATTTTAGCTGCTCTGTTTTTAGGAGAAATGCATCTAAGCTTATTGGTT 478
||||||||||| ||||||||| |||||||||| ||| || ||| ||||||||| | ||||
Sbjct 419 GAGTTTTAAGAAATTTTAGCTACTCTGTTTTTCGGACAAGTGCTTCTAAGCTTGTCGGTT 478
Query 479 TTGTCT-CGGAGTTTGCTCTCTCTGGAAAAGCTTTTGATGCTCAAGATATGTTGATGAGA 537
|| | | ||||||||||||||||||||||| |||||||| ||| ||||||||||||| |
Sbjct 479 TTAT-TGCGGAGTTTGCTCTCTCTGGAAAATCTTTTGATTTTCAGGATATGTTGATGAAA 537
Query 538 TGTACATTGGACTCCATCTTTAAAGTTGGGTTTGGTGTGGAGTTAAAATGTTTGGATGGG 597
||||||||||||||||||||||||||||| || |||||||||||| |||| | ||||||
Sbjct 538 TGTACATTGGACTCCATCTTTAAAGTTGGATTCGGTGTGGAGTTAGGATGTCTAGATGGG 597
Query 598 TTTAGCAAAAAAGGGGAAGAGTTTATGGAGGCTTTTGATGAAGGTAACGTTGCAACTAGT 657
||||||||| ||||||||||||| ||| |||||||||||||||| |||| |||||||||
Sbjct 598 TTTAGCAAAGAAGGGGAAGAGTTCATGAAGGCTTTTGATGAAGGCAACGGCGCAACTAGT 657
Query 658 TCCA-GATACATCGATCCACTTTGGAAGCTGAAATGGTTTCTCAACATTGGATCACAATC 716
|||| | | || ||| || |||||||||||||||| ||||| |||||||||||| | ||
Sbjct 658 TCCAGGGT-CACCGACCCGTTTTGGAAGCTGAAATGTTTTCTTAACATTGGATCAGAGTC 716
Query 717 TAA-ACTCAAGAAGAGTATTGCTACTATAGATAAATTTGTCTATAGTCTCATTACCACAA 775
|| |||||||||||| ||||||| |||||| || ||||||||||||||||||||||| |
Sbjct 717 -AAGACTCAAGAAGAGCATTGCTATTATAGACAAGTTTGTCTATAGTCTCATTACCACTA 775
Query 776 AAAGGAAAGAGCTTGCTAAGGAACAGAACACTGT-TGTTAGAGAGGACATACTATCGAGA 834
|||||||||||||| | ||||||||||||||| | ||||||||||||||| ||||||| |
Sbjct 776 AAAGGAAAGAGCTTTCCAAGGAACAGAACACT-TCTGTTAGAGAGGACATCCTATCGAAA 834
Query 835 TTTCTAGTGGAGAGTGAGAAAGATCCGGAGAACATGAATGATAAGTACCTGAGAGATATA 894
||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 835 TTTCTTCTCGAGAGTGAGAAAGATCCGGAGAACATGAATGATAAGTACCTGAGGGATATC 894
Query 895 ATTCTGAACT-TTATGATTGCTGGTAAGGACACAACCGCTGCATCACTTTCTTGGTTCTT 953
||| |||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 895 ATTTTGAA-TGTTATGGTTGCTGGTAAGGACACAACCGCTGCATCACTCTCTTGGTTCTT 953
Query 954 GTACATGCTCTGCAAAAACCCACTTGTTCAGGAGAAAATCGTTCAAGAAATCAGAGATGT 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 GTACATGCTCTGCAAAAACCCACTTGTTCAGGAGAAAATCGTTCAAGAAATCAGAGATGT 1013
Query 1014 GACATCAAGTCACGAGAAAACAACCGACGTAAATGGTTTCATTGAAAGTATTAAC-GAAG 1072
||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||
Sbjct 1014 GACATCAAGTCACGAGAAAACAACCGATGTAAATGGTTTCATTGAAAGTGT-AACCGAAG 1072
Query 1073 AGGCTCTTGATCAGATGCAGTATCTCCATGCAGCCTTGTCTGAGACCT-TGAGGCTTTAC 1131
| ||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||
Sbjct 1073 AAGCTCTTGCTCAGATGCAGTATCTCCATGCGGCCTTGTCTGAGAC-TATGAGGCTTTAC 1131
Query 1132 CCTCCTGTGCCTGTGGACACGAGATATGCAGAAAATGATGACATTCTTCCAGATGGACAT 1191
|| |||||||||| | ||| ||| | |||||||||||||||| |||||||||||||||||
Sbjct 1132 CCACCTGTGCCTGAGCACATGAGGTGTGCAGAAAATGATGACGTTCTTCCAGATGGACAT 1191
Query 1192 AGAGTGAGCAAAGGGGATAATATCTACTACATAGCCTATGCAATGGGTAGGATGACTTAC 1251
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1192 AGAGTGAGCAAAGGGGATAATATCTACTACATATCCTATGCAATGGGTAGGATGACTTAC 1251
Query 1252 ATTTGGGGACAAGATGCTGAGGAATTCAAGCCAGAGAGATGGCTTAAGGACGGCGTGTTC 1311
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1252 ATTTGGGGTCAAGATGCTGAGGAATTCAAGCCAGAGAGATGGCTCAAGGACGGCGTATTC 1311
Query 1312 CAACCCGAATCACCATTCAAATTTATAAGCTTTCATGCTGGTCCAAGAATCTGTCTTGGC 1371
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1312 CAACCCGAATCACAATTCAAATTCATAAGCTTTCATGCTGGTCCAAGAATCTGTATTGGC 1371
Query 1372 AAGGATTTCGCATACCGGCAAATGAAGATAGTAGCAATGGCACTTCTTCACTTCTTTCGC 1431
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1372 AAGGATTTCGCATACCGGCAGATGAAGATAGTATCAATGGCACTTCTTCACTTCTTTCGC 1431
Query 1432 TTCAAAATGGCTGATGAGAAGAGCAATGTGTGTTACAAGACAATGCTTACACTTCATGTC 1491
|||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||
Sbjct 1432 TTCAAAATGGCTGATGAGAACAGCAAGGTGTCTTACAAGAAAATGCTTACACTTCATGTC 1491
Query 1492 GAAGGAGGACTCCATCTATGCGCAATTCCGAGGACAAGCACTTGA 1536
|| |||||||| ||||| || ||||| ||||||||||||||||||
Sbjct 1492 GATGGAGGACTACATCTCTGTGCAATCCCGAGGACAAGCACTTGA 1536
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75802822950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5