BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg346505
Length=1557
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46960.2 | Symbols: CYP709B1 | cytochrome P450, family 709, ... 2379 0.0
AT4G27710.1 | Symbols: CYP709B3 | cytochrome P450, family 709, ... 780 0.0
> AT2G46960.2 | Symbols: CYP709B1 | cytochrome P450, family 709,
subfamily B, polypeptide 1 | chr2:19292049-19294260 REVERSE
LENGTH=1854
Length=1854
Score = 2379 bits (1288), Expect = 0.0
Identities = 1474/1564 (94%), Gaps = 11/1564 (1%)
Strand=Plus/Plus
Query 1 ATGGAGCTCGTAATTTTCTTGGCACTAATTGTCTTGCTCC---TTATTGGTCTAAGGATA 57
|||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||
Sbjct 49 ATGGGGCTCGTAATTTTCTTGGCACTAATTGTCTTAATCCTTATTATTGGTCTCAGGATA 108
Query 58 TTCGAGGCTTTTGTGATCCTTGTTTGGCATCCATTTGTGGTGACCAGAAGATTCAAAAAC 117
||| | |||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 109 TTCAAAGCTTTTATGATTCTTGTTTGGCATCCATTTGTGTTGACCAGAAGACTCAAAAAC 168
Query 118 CAAGGAATCTCAGGCCCAAAGTACAGAATCTTTCACGGAAACCTCAGCGAGATAAAGAAG 177
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 169 CAAGGAATCTCAGGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAG 228
Query 178 ATGAAGAGAGAATCTCATCTTTCGACTCTTGATCCCAGCTCCAATGATATTTTCCCTCGT 237
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 229 ATGAAGAGAGAATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGT 288
Query 238 ATTCTTCCTCATTATCAACGATGGATGTCTCAATACGGAGAGACATTTCTTTACTGGAAC 297
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 289 ATTCTTCCTCATTATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGAAC 348
Query 298 GGAACAGAACCGAGGATATGCATCTCAGATCCTGAACTTGCAAAAAATATCTTGTCGAAC 357
|||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 349 GGAACAGAGCCAAGGATATGCATCTCAGATCCTGAACTTGCAAAAACTATGTTGTCGAAC 408
Query 358 AAGTTAGGTTTCTTTGTCAAATCAAAGATGAGACCCGAGGTC-GTTAAACTTGTCGGCTC 416
||||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||
Sbjct 409 AAGTTAGGTTTCTTTGTCAAATCAAAGGCAAGACCTGAGG-CTGTTAAACTTGTCGGCTC 467
Query 417 CAAAGGACTTGTCTTTATCGAAGGTTCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 476
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 468 CAAAGGACTTGTCTTTATCGAAGGTGCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 527
Query 477 TGCTTTCTCCATCGATAGGCTCAAGATCATGACTACCGTGATGGTGGATTGTACGCTCAA 536
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 528 TGCTTTCTCCATCGATAGGCTCAAGATCATGACGACCGTGATGGTTGATTGTACGCTCAA 587
Query 537 GATGTTAGAGGAGTGGAGAAAAGAGAAG-AGTAAGGAAGAAACAGCGCAACCGATGATTA 595
||||||||||||||||||||||||| || | |||||||||||||| ||| |||| |||||
Sbjct 588 GATGTTAGAGGAGTGGAGAAAAGAG-AGCACTAAGGAAGAAACAGAGCACCCGAAGATTA 646
Query 596 AAAAGGAAATGCACAG-AGAGTTCCAAAGACTAACAGCAGATGTAATAGCGACCTCTGCT 654
||||||||||| || | ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct 647 AAAAGGAAATGAAC-GAAGAGTTCCAAAGACTAACAGCTGATATAATAGCAACCTCTGCG 705
Query 655 TTTGGAAGTAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAAG 714
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 706 TTTGGAAGCAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAGG 765
Query 715 TGTTGTATACCGTCTCTCAACAAAGTCTTTATCCCTGGAACTCAGTATCTTCCTACGCCT 774
|||| || | | ||||||||| |||||| |||||||||||||||||| ||||||||||||
Sbjct 766 TGTTATACAACTTCTCTCAACCAAGTCTCTATCCCTGGAACTCAGTACCTTCCTACGCCT 825
Query 775 TCGAACTTTCGGATATGGAAGCTGGAGAGGAAAATGGATAAGTCAATTAAGAGAATTATA 834
|||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 826 TCGAACATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAATTATA 885
Query 835 AGGTCGAGACTAGAGTCACAA-TCAGATTATGGAGACGATCTTCTGGGAATCTTGTTGAA 893
|| ||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 886 AGTTCGAGACTACAGTCA-AAGTCAGATTATGGAGACGATCTTCTCGGAATCTTGTTGAA 944
Query 894 AGCATACAAAACTGAAGGGAACGAACGAAAGATGAGCATCGAAGAGATCATACATGAATG 953
||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 945 AGCTTACAACACTGAAGGGAAGGAACGGAAGATGAGCATCGAAGAGATCATACATGAATG 1004
Query 954 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTGCGAATTTATTGACATGGACAACGAT 1013
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1005 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTGGCATGGACAACGAT 1064
Query 1014 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1124
Query 1074 TGGTAAACAAAAAACCCTAGATTCAGAAACTTTCTCCAAACTCAAACTGATGAACATGGT 1133
|||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1125 CGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAAGCTGATGAACATGGT 1184
Query 1134 GATCATGGAGTCGCTTCGACTTTACGGACCAACGTCAGCTTTGGCCCGAGAAGCATCAGT 1193
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1185 GATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGCCCGAGAAGCATCAGT 1244
Query 1194 AAGCACAAAGCTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTCGTCATCCCGCTTCT 1253
|| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1245 AAATATAAAGTTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTAGTCATCCCGCTTCT 1304
Query 1254 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAACGCG 1313
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1305 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAATGCG 1364
Query 1314 GTTTGCAAACGGTGTTTCCCGAGCCGCCAACCACCCAAATGCTCTCCTAGCATTCTCCGT 1373
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1365 GTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAACGCTCTCCTAGCATTCTCCGT 1424
Query 1374 CGGACCAAGAGCCTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1433
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 CGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1484
Query 1434 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACGCGCCGGT 1493
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1485 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACACCCCTGT 1544
Query 1494 GGATCACCTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1553
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 GGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1604
Query 1554 CTGA 1557
||||
Sbjct 1605 CTGA 1608
> AT4G27710.1 | Symbols: CYP709B3 | cytochrome P450, family 709,
subfamily B, polypeptide 3 | chr4:13828432-13830596 FORWARD
LENGTH=1824
Length=1824
Score = 780 bits (422), Expect = 0.0
Identities = 1188/1542 (77%), Gaps = 115/1542 (7%)
Strand=Plus/Plus
Query 64 GCTT-TTGTGATCCTTGTTTGGCATCCATTTG-TGGTGA-CCAGAAGATTCAA-AAACCA 119
|||| ||| |||||| ||| || |||| ||| || | | | | ||||||||| ||| ||
Sbjct 161 GCTTGTTG-GATCCTCCTTTTGCGTCCA-TTGATGCT-ATCAAAAAGATTCAAGAAA-CA 216
Query 120 AGGAATCTCAGGCCCAAAGTACAGAATCTT-TCACGGAAACCTCAGCGAGATAAAGAAGA 178
|||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct 217 AGGAATCTCAGGACCAAAGTACAAAATCTTGT-ACGGAAACCTCAGCGAGATAAAGAAGA 275
Query 179 TGAAGAGAGAATCTCATCTTTCGACT-CTTGATCCCAGCTCCAATGATATTTTCCCTCGT 237
|||||| |||| || | |||| | | || ||||||| |||||||||||||||||||||
Sbjct 276 TGAAGAAAGAAGCTGACCTTT-GTGTTCTGGATCCCAATTCCAATGATATTTTCCCTCGT 334
Query 238 AT-TCTTCCTCATTATCAACGATGGATGTCTCAATACGGAGAGACATTTCT-TTACTGGA 295
| | ||||||| ||||| | ||||||||||||||||||||| |||||||| || |||||
Sbjct 335 GTGT-TTCCTCAGTATCACCAATGGATGTCTCAATACGGAGATACATTTCTATT-CTGGA 392
Query 296 AC-GGAACAGAACCGAGGATATGCATCTCAGATCCTGAACTTGCAAAAAATATCTTGTCG 354
| |||||| |||| | |||| ||||||| ||| ||| || || ||| | ||||||||
Sbjct 393 -CTGGAACAAAACCAACTATATACATCTCAAATCATGAGCTAGCGAAACAGGTCTTGTCG 451
Query 355 AACAAGTTAGGTTTCTTTGTCAAATCAAAGATGA-GACCCGAGGTCGTTAA-ACTTGTCG 412
| |||||| |||||| | | | | | || | |||| |||||| || | |||| |||
Sbjct 452 AGCAAGTTCGGTTTCACTATTATACCGGTGAA-ACGACCTGAGGTC-TTCATACTTTTCG 509
Query 413 GCTCCAAAGGACTTGTC-TTTATCGAAGGTTCTGATTGGGTTCGCCATAGAAGAATCTTG 471
| | ||||||||| || |||||| ||||| ||||||| ||||||||||| ||||||||
Sbjct 510 G-T--AAAGGACTT-TCCTTTATCCAAGGTGATGATTGGATTCGCCATAGACGAATCTTG 565
Query 472 AACCCTGCTTTCTCCATCGATAGGCTCAAGATCATGACT-A-CCGTGATGGTG-GATTGT 528
||||||||||||||||| ||| |||||||| |||||| | ||| |||| | |||||
Sbjct 566 AACCCTGCTTTCTCCATGGATCGGCTCAAGGCCATGACACAACCG--ATGG-GAGATTGC 622
Query 529 ACGCTCAAG-ATGTTAGAGGAGTGGAGAAAAGAGAAGAGTAAGGAAGAAACAGCGCAACC 587
|| || | | || || ||||||||||||||| ||| || | | || | | | ||
Sbjct 623 AC-CTTACGGATATTTGAGGAGTGGAGAAAACAGA-GA--A-G-AA-ATG--GTG-AAGT 672
Query 588 GATGATTAAAAA-G-GA-AATGCACAGAGAGTTCCA-AAGACTAACAGCAGATGTAATAG 643
| |||| || | | || || ||| | ||||||||| || ||| || || || | ||||
Sbjct 673 GTTGATCAAGATTGAGATAA-GCA-A-AGAGTTCCATAA-ACTGACCGCTGACATTATAG 728
Query 644 CGACCT-CTGCTTTTGGAAGTAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATG 702
| || | |||| |||||||||||||| | ||||||||||||| ||| ||| |||||||
Sbjct 729 CAAC-TACTGCGTTTGGAAGTAGTTATGCCGAAGGAATCGAATTGTGTAGGTCACAAACA 787
Query 703 GAGCTTAAAAAGTGTTGTAT-ACCGT-CTCTCAACAAA-GTCTTT-ATCCCTGGAACTCA 758
|||||| | |||| || ||| | || |||||| | || || ||| ||||| ||||||||
Sbjct 788 GAGCTTGAGAAGTATTATATTA--GTTCTCTCA-CTAACGT-TTTCATCCCCGGAACTCA 843
Query 759 GTATCTTCCTACGCCTTCGAACTTTCGGA-TATGGAAGCTGGAGAGGAAAATGGATAAGT 817
|| |||||||||||| | ||| || | ||||| |||| | | |||| || | || |
Sbjct 844 ATACCTTCCTACGCCTACCAACCTTAA-ACTATGGGAGCTCCATAAGAAAGTGAAGAACT 902
Query 818 CAATTAAGAGAATTATAAGGT-CGAGACTAGAGTCACAATC-A-GAT-TATGG--A-G-- 868
| || || ||||| ||| | | | || ||| | ||| ||| | || ||||| | |
Sbjct 903 CGATCAAAAGAATCATA-GATTCAAGGCTAAAATCAAAATGTAAGACCTATGGCTATGGG 961
Query 869 -ACGATCTTCT-GGGAATCTTGTTGAAAGCATACAAAA-CTGAAGG-GAACGA-ACGAAA 923
|||||||||| ||| || |||||| || | | ||| || || | | | || | ||||
Sbjct 962 GACGATCTTCTAGGGG-TCATGTTGACTGC-TGCGAAATCT-AACGAGTATGAGA-GAAA 1017
Query 924 GATGAGCATCGAAGAGATCATACATGAATGCAGGACTTTCTTCT-TCGGAGGTCACGAAA 982
|||||| || || ||||||||| | ||||||| || ||||| || | | ||| || | ||
Sbjct 1018 GATGAGAATGGATGAGATCATAGAGGAATGCAAGAATTTCTACTAT-GCAGGGCAAGGAA 1076
Query 983 CTACTGCGAATT-TATTGACATGGACAACGATGTTGCTGAGCTTGCACCAAGATTGGCAG 1041
||||| ||| || ||||||||||||| |||||||| || ||||||||||||| ||||||
Sbjct 1077 CTACTTCGA-TTCTATTGACATGGACTACGATGTTACTAAGCTTGCACCAAGGTTGGCAA 1135
Query 1042 GAGAAACTCAGAGAAGAGATATTCAAAGAATGTGGTAAACAAAAAA-CCCTAGATTCAGA 1100
|||||||||||||||||| | || || |||||||||||| | |||| ||| |||| ||||
Sbjct 1136 GAGAAACTCAGAGAAGAGGTTTTTAATGAATGTGGTAAAGATAAAATCCC-AGATACAGA 1194
Query 1101 AACTTTCTCCAAACTCAAACTGATGAACATGGTGATCATGGAGTCGCTTCGACTTTACGG 1160
|| ||||| ||||||||| |||||||||||||| | |||||||||||||| || |||||
Sbjct 1195 CACCTTCTCTAAACTCAAATTGATGAACATGGTGTTGATGGAGTCGCTTCGTCTGTACGG 1254
Query 1161 ACCAACG-TCAGC-TTTGGCCCGAGAAGCATCAGTAAGCACA--AAGCTAGGTGACCTAG 1216
||| | | | ||| ||||||| ||| || ||| | | ||| |||| || | |
Sbjct 1255 ACCCGTGATTAAAATTT--CCCGAGAGGCAACAC-AAG-ATATGAAGGTAGGACACTTGG 1310
Query 1217 AGATTCCCAA-GGGCACAACCGTCGTCATCCCGCTT-CTGAAGATGCATAGCGACAAGAC 1274
|||| ||||| |||||||| | | |||| ||| || ||||||||||| || |||||| |
Sbjct 1311 AGAT-CCCAAAGGGCACAAGCATTATCATACCG-TTACTGAAGATGCACAGAGACAAGGC 1368
Query 1275 CCTTTGGGGATCCGACGCCGA-CAAATTCAA-CCCAACGCGGTTTGCAAACGGTGTTTCC 1332
| | ||||| |||||||| ||| ||||| ||| | | || | |||||| ||||
Sbjct 1369 CATATGGGGCGAAGACGCCGAACAA-TTCAATCCCTT-GAGATTCGAAAACGGCATTTCT 1426
Query 1333 CGAGCCGCCAACCACCCAAATGCTCTCCTAGCATTCTCCGTCGGACCAAGAGCCTGCATT 1392
| |||| ||| |||||||| |||||||| | ||||| ||||||||||||| ||||||
Sbjct 1427 CAAGCCACCATTCACCCAAACGCTCTCCTCCCGTTCTCAATCGGACCAAGAGCTTGCATT 1486
Query 1393 GGCCAAAA-CTTTGTCATGATCGAAGCCAAGACTGTGCTCACCATGATTCTTCAACGGTT 1451
| |||||| ||||| |||| ||||||||||||| || ||||| ||||| ||||||| |||
Sbjct 1487 G-CCAAAAACTTTGCCATGGTCGAAGCCAAGACCGTTCTCACTATGATCCTTCAACAGTT 1545
Query 1452 TCGGTTTATTAGCCTCTGTGACGAGTATAAGCACGCGCCGGTGGATCACCTC-A-CTATT 1509
| | ||| |||||| ||||||||||||| |||| || |||||| || | || ||
Sbjct 1546 CCAGCTTA---GCCTCTCCCCCGAGTATAAGCACACGCCAGTTGATCACTTCGATCTCTT 1602
Query 1510 CAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCT-GGA 1550
| || || |||||| |||||||||||||||| ||||| |||
Sbjct 1603 C--CCGCAATACGGCCTACCCGTAATGCTTCACCCTCTCGGA 1642
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76857034395
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5