BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg346730
Length=822
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02360.1 | Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B1... 1179 0.0
AT2G02340.1 | Symbols: AtPP2-B8, PP2-B8 | phloem protein 2-B8 |... 569 1e-161
AT2G02350.1 | Symbols: SKIP3, AtPP2-B9 | SKP1 interacting partn... 555 3e-157
AT2G02240.1 | Symbols: MEE66 | F-box family protein | chr2:5923... 470 1e-131
AT2G02320.1 | Symbols: AtPP2-B7, PP2-B7 | phloem protein 2-B7 |... 381 6e-105
> AT2G02360.1 | Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10
| chr2:619406-620768 REVERSE LENGTH=1144
Length=1144
Score = 1179 bits (638), Expect = 0.0
Identities = 766/826 (93%), Gaps = 15/826 (2%)
Strand=Plus/Plus
Query 1 ATGGGGAGAAAACGCAGCGTTACATCGGAGTGGTCGCCGTTCGATTCCTTGCCGGAGGAA 60
||||||||||||||||| |||| |||||||| ||| ||||||||||| || ||||| ||
Sbjct 33 ATGGGGAGAAAACGCAGAGTTAAATCGGAGTCGTCTCCGTTCGATTCATTTCCGGAAGAT 92
Query 61 TGCATCTCCAACATAATCTCTTTCACAAATCCACGCGATGCGTGCGTCGCTGCTACAGTT 120
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 93 TGCATCTCCTACATAATCTCTTTTACAAATCCACGCGATGCGTGCGTCGCTGCTACGGTT 152
Query 121 TCGAAAACGTTTGAATCGGCGGTGAAGTCAGATATTATATGGGAGAAGTTTCTTCCGGCG 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 153 TCGAAAACGTTTGAATCGACGGTGAAGTCAGATATTATATGGGAGAAGTTTCTTCCGGCG 212
Query 181 GAGTATGAATCTCTGATTCCTCCATCGCGA-TCTTTCTCATCGAAGAAGGAACTCTATTT 239
|| ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct 213 GATTATGAATCTCTGATTCCTCCATCGCGAGT-TTTCTCATCGAAGAAGGAGCTCTATTT 271
Query 240 CTCTCTCTGTAACGATCCTGTTCTAATCGACGATGGCAAAAAGAGCATATGGTTAGAGAA 299
||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||
Sbjct 272 CTCTCTCTGTAACGATCCTGTTCTATTCGACGATGACAAAAAGAGCGTATGGTTAGAGAA 331
Query 300 AGCGAGTGGGAAGAGGTGTCTGATGATATCTGCGATGAACCTCTCAATCATATGGGGAGA 359
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 332 AGCGAGTGGGAAGAGGTGTCTGATGTTATCTGCGATGAACCTCTCAATCATATGGGGAGA 391
Query 360 TACTCCTCACTATTGGCAATGGATTCCAATTCCTGAATCTAGGTTTGAAAAAGTAGCGAA 419
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 TAATCCTCAGTATTGGCAATGGATTCCAATTCCTGAATCTAGGTTTGAAAAAGTAGCGAA 451
Query 420 GCTT-GTTGATGTATGTTGGTTCGAGATTCGTGGCAGAACGAATGCTCGTGTCTTATCTC 478
||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 452 ACTTCGC-GATGTATGTTGGTTCGAGATTCGTGGCAGAACGAATACTCGTGTATTATCTC 510
Query 479 CAAGAACTCGTTACTCGGCTTATATTGTGTTCAAGAAAGTGGA-A--TGTTATGGCTTTC 535
||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct 511 CAAGAACTCGTTACTCGGCTTATATTGTGTTCAAGGGAGTGGATAAATGTTATGGCTTTC 570
Query 536 AGAATGTGGCAATAGAAGCTTCAGTTGGAATGGTGGGACAGGAACCTTCTAGAAGATTTA 595
|||||||||| ||||||||| | || ||| ||||||||||||| |||||||||||||| |
Sbjct 571 AGAATGTGGCCATAGAAGCTGCGGTAGGAGTGGTGGGACAGGAGCCTTCTAGAAGATTAA 630
Query 596 TATGCTTT-GATGAAGCTATAAGGAGATACGGGGGAAGGAGGAACTTTGTGAAACCTAAG 654
|||||||| | ||||||||||||||| ||| |||||||||| ||||||||||||||
Sbjct 631 TATGCTTTAG-TGAAGCTATAAGGAG----GGG--AAGGAGGAACGTTGTGAAACCTAAG 683
Query 655 GAGAGAGAAGATGGGTGGATGGAGATAGAGCTTGGGGAATTCTTCATTGAAGGAGGAATA 714
||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||
Sbjct 684 CAGAGAGAAGATGGGTGGATGGAGATTGAGCTTGGGGAGTTCTTCAATGATGGAGGAATA 743
Query 715 ATGAATAGTGATGAAATTGAGATGAGTGCTTTAGAGACTAAGCTGCTCAATTGGAAGTGT 774
||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 744 ATGGATAATGATGAAATTGAGATGAGTGCTTTAGAGACTAAGCAGCTCAATCGGAAGTGT 803
Query 775 GGCTTGATCATTCAAGGAATTGAAATCCGCCCTGCCAAAATCCTCT 820
||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 804 GGCTTGATCATTCAAGGAATTGAAATCCGACCTGCTAAAATCCTCT 849
> AT2G02340.1 | Symbols: AtPP2-B8, PP2-B8 | phloem protein 2-B8
| chr2:616088-617274 REVERSE LENGTH=918
Length=918
Score = 569 bits (308), Expect = 1e-161
Identities = 656/815 (80%), Gaps = 60/815 (7%)
Strand=Plus/Plus
Query 48 CTTGCCGGAGGAATGCATCTCCAA-CATAATCTCTTTCACAAATCCACGCGATGCGTGCG 106
||| ||||| ||||| ||| ||| |||| |||||||||||| || | ||||||||||
Sbjct 114 CTTACCGGAAGAATGTGTCT-CAATCATAGTCTCTTTCACAAGCCCTCAAGATGCGTGCG 172
Query 107 TCGC-TGCTACAGTTTCGAAAACGTTTGAATCGGCGGTGAAGTCAGATATTATATGGGAG 165
|| | |||| | ||||||||||| |||| |||||||| |||||||||||| ||||||||
Sbjct 173 TC-CTTGCTTCGGTTTCGAAAACCTTTGCTTCGGCGGTCAAGTCAGATATTGTATGGGAG 231
Query 166 AAGTTTCTTCCGGCGGAGTATGAATCTCTGATTCCTCCATCGCGATCTTTC----TC--A 219
|||||| ||||| | |||||||||||| ||||| ||| ||| ||| ||||| || |
Sbjct 232 AAGTTTATTCCGCCAGAGTATGAATCTTTGATTTCTCAATCCCGAGCTTTCAAATTCTTA 291
Query 220 TCGAAGAAGGAACTCTATTTCTCTCTCTGTAAC-GATCCTGTTCTAATCGACGATGGCAA 278
||||||||||| ||||||||| |||| || || || |||||||||| |||||||||||
Sbjct 292 TCGAAGAAGGAGCTCTATTTCGCTCTTTGCGACAAAT-CTGTTCTAATTGACGATGGCAA 350
Query 279 AAAGAGCATATGGTTAGAGAAAGCGAGTGGGAAGAGGTGTCTGATGATATCTGCGATGAA 338
||||||| ||||| |||| ||||||| | |||||| ||| | |||||||| ||||||||
Sbjct 351 AAAGAGCTTATGGATAGAAAAAGCGAACGCGAAGAGATGTATCATGATATCAGCGATGAA 410
Query 339 CCTCT-CAATCATAT-GGGGAGATACTCCTCACTA-TTGGCAATGGATTCCA-ATTCCTG 394
||| | ||||| | ||||| || ||||||| | ||||| |||||||||| | ||||
Sbjct 411 CCT-TGCAATCGCGTGGGGGA-ATTCTCCTCA-GAGTTGGCGATGGATTCCAGA-TCCTC 466
Query 395 AATCTAGGTTTGAAAAAGTAGCGAAGCTTGTTGATGTATGTTGGTTCGAGATTCGTGGCA 454
|| |||||||||||| ||||||| |||| |||| ||||||| ||| |||||||||||||
Sbjct 467 AAGCTAGGTTTGAAACAGTAGCGGAGCTACTTGAAGTATGTTTGTTTGAGATTCGTGGCA 526
Query 455 GAACGAAT-GCTCGTGTCTTATCTCCAAGAACTCGTTACTCGGCTTATATTGTGTTCAAG 513
||| ||| | |||||| ||||||||| |||||||||||||||||| ||||||| ||||
Sbjct 527 GAATAAATAG-TCGTGTGATATCTCCAAAAACTCGTTACTCGGCTTACATTGTGTACAAG 585
Query 514 AAAGTG--GA-ATGTTATGGCTTTCAGAATGTGGCAATAGAAGCTT-CAGTTGGAATGGT 569
||| || | ||||||||||||| ||||||| || |||||| || ||||||| ||||
Sbjct 586 AAATTGAATATATGTTATGGCTTTGAGAATGTAGCCGTAGAAG-TTGTAGTTGGAGTGGT 644
Query 570 ---G--GGA--CAG--GAACCTTCTAGAAGATTTATATGCTTTGATGAAG-CTAT--A-- 615
| ||| || ||| ||| | |||||| |||||||||||||| || |||| |
Sbjct 645 GGGGCAGGATTTAGAAGAATCTTGTCGAAGATATATATGCTTTGATG-AGACTATGGATG 703
Query 616 AGGAGATACG--GG-G-GA-A--GG-AGGAACTTTGTGAAACCTAAG-GA-GAGAGAAGA 665
|| || | || || | || | || | |||| | || ||||| || || |||| ||||
Sbjct 704 AGCAGTTTCGAAGGAGAGATAGGGGAAAGAACCTAGTAAAACC--AGAGAGGAGAAAAGA 761
Query 666 TGGGTGGATGGAGATAGAGCTTGGGGAATTCTTCATTGAAGGAGGAATAATGAATAG-TG 724
|||||||||||||||| || ||||||||||||||| |||||||||| || |||| | ||
Sbjct 762 TGGGTGGATGGAGATAAAGATTGGGGAATTCTTCAATGAAGGAGGATTATTGAA-CGATG 820
Query 725 ATGAAATTGAGATGAG-TGCTTTAGAGACTAAGCTGC-TCAATTGGAAGTGTGGCTTGAT 782
|||||||||||||| | |||||||||| |||||| || || ||||||| ||||||||||
Sbjct 821 ATGAAATTGAGATG-GTTGCTTTAGAGGCTAAGCAGCGTC-ATTGGAAACGTGGCTTGAT 878
Query 783 CATTCAAGGAATTGAAATCCGCCCTGCCAAAATCC 817
||||||||||||||||||||| ||| | || ||||
Sbjct 879 CATTCAAGGAATTGAAATCCGTCCTACGAATATCC 913
> AT2G02350.1 | Symbols: SKIP3, AtPP2-B9 | SKP1 interacting partner
3 | chr2:617800-619091 REVERSE LENGTH=1030
Length=1030
Score = 555 bits (300), Expect = 3e-157
Identities = 650/811 (80%), Gaps = 55/811 (7%)
Strand=Plus/Plus
Query 41 TCGATTCCTTGCCGGAGGAATGCATCTCCAACATAATCTCTTTCACAAATCCACG-CGAT 99
||||||| ||||| |||| |||||| || ||||||||||||||||||| ||| | ||
Sbjct 44 TCGATTCGTTGCCTGAGGGATGCATTTCAAACATAATCTCTTTCACAAGTCC-TGAAGAC 102
Query 100 GCGTGCGTCGCTGCTACAGTTTCGAA-AACGTTTGAATCGGCGGTGAAGTCAGATATTAT 158
|| |||||||||||| | |||||||| | | || |||||||||||||| |||||||| |
Sbjct 103 GCTTGCGTCGCTGCTGCGGTTTCGAAGATC-TTCGAATCGGCGGTGAAATCAGATATCGT 161
Query 159 ATGGGAGAAGTTTCTTCCGGCGGAGTATGAATCTCTGATTCCTCCATCGCGA-TCTTTCT 217
||||||||||||||||||| |||| || |||||||||||| |||| |||||| | |||||
Sbjct 162 ATGGGAGAAGTTTCTTCCGACGGATTACGAATCTCTGATTACTCCGTCGCGAGT-TTTCT 220
Query 218 CATCGAAGAAGGAACTCTATTTCTCTCTCTGTAACGATCCTGTTCTAATCGACGATGGCA 277
||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||
Sbjct 221 CATCGAAGAAGGAACTCTATTTCTCTCTCTGCAACGATCCTCTTCTAATCGAAGATGGCA 280
Query 278 AAAAGAGCATATGGTTAGAGAAAGCGAGTGGGAAGAGGTGTC-TGATGATATCTGC---- 332
||| |||| |||||||||||||||||||||||||||| || | | ||| |||||||
Sbjct 281 AAATGAGCTTATGGTTAGAGAAAGCGAGTGGGAAGAGATG-CATAATGTTATCTGCAACT 339
Query 333 G--ATGAACCTCTCAATCATATGGGGAGATAC-TCCTCA-C-TATTGGCAATGGATTCCA 387
| ||||| || |||| ||| || ||||| || ||| | | || | ||||||||||
Sbjct 340 GCGATGAATCTATCAAGCAT--GGC-AGATATGTC-TCAGCGT-TTC-CTATGGATTCCA 393
Query 388 AT-TCCTGAATCTAGGTTTGAAAAAGTAGCGAAGCTT-GTTGATGTATGTTGGTTCGAGA 445
| ||| |||||||||||||||| ||||||| |||| | || | || | |||| |||
Sbjct 394 -TGTCCAGAATCTAGGTTTGAAACAGTAGCGGCGCTTCGC-GAAGCATATAGGTTTGAGT 451
Query 446 TTCGTGGCAGAACGAATGCTCGTGTC-TTATCTCCAAGAACTCGTTACTCGG-CTTATAT 503
|| | |||||| |||| |||||||| || |||| ||||||||||||||||| || | ||
Sbjct 452 TTAATTGCAGAATGAATACTCGTGTCCTT-TCTCTAAGAACTCGTTACTCGGTCT-ACAT 509
Query 504 TGTGTTCAAGAAAGTGGA-A-T-GTTATGGCTTTCAGAATGTGGCAATAGAAGCT-TCAG 559
|||||||||||||| ||| | | | | ||||||| || |||| | ||||| ||| | ||
Sbjct 510 TGTGTTCAAGAAAGCGGATAATTGGTGTGGCTTTAAGGGTGTGTCTATAGAGGCTGT-AG 568
Query 560 TTGGAATGGTGGGACAGGAACCTTCTAGAAGATTT-ATATGCTTTGATGAAGCTATAAGG 618
|||| || |||||| |||| ||| |||||| ||| |||||||||||| | || || ||
Sbjct 569 TTGGGATAGTGGGAGAGGAGTCTTTTAGAAG-TTTCATATGCTTTGAT-ACGC-ATG-GG 624
Query 619 A-GATACGGGG--GAAGGAGGAACTTTGTG---AAACCTA-AGGAGAGAGAAGATGGGTG 671
| | | || ||| |||||| | ||| ||||| | || |||||||||||||||
Sbjct 625 AAGGGGCAGGCTCGAAAGAGGAAAGTGGTGGCGAAACC-AGAGTTGAGAGAAGATGGGTG 683
Query 672 GATGGAGATAGAGCTTGGGGAATTCT-TCATTGAAGGAGGAATAATGAATAGTGATGAAA 730
|||||||| |||| |||||||||||| | || ||||||||| |||||| |||||||||
Sbjct 684 GATGGAGACAGAGATTGGGGAATTCTATAAT-GAAGGAGGATTAATGAGTAGTGATGAGG 742
Query 731 TTGAGATGAGTGCTTTAGAGACTAAG--CTGCTCAATTGGAAGTGTGGCTTGATCATTCA 788
||||||| ||| || ||||| ||| | || || | ||| |||| ||| ||||||
Sbjct 743 TTGAGATAAGTACTGTAGAGGGTAAATAC-GCCCAGCAG-AAGCGTGGTTTGGTCATTCT 800
Query 789 AGGAATTGAAATCCGCCCTGCCAAAATCCTC 819
||||||||||||||| ||||| |||||||||
Sbjct 801 AGGAATTGAAATCCGTCCTGCGAAAATCCTC 831
> AT2G02240.1 | Symbols: MEE66 | F-box family protein | chr2:592359-593602
REVERSE LENGTH=963
Length=963
Score = 470 bits (254), Expect = 1e-131
Identities = 628/799 (79%), Gaps = 64/799 (8%)
Strand=Plus/Plus
Query 48 CTTGCCGGAGGAATGCATCTCCAACATAATCTCTTTCACAAATCCACGCGATGCGTGCGT 107
|||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 189 CTTGCCGGAGGATTGCATCTCCAACATAATCTCTTTCACAAGTCCACGAGATGCGTGCGT 248
Query 108 CGCTGC-TACAGTTTCGAAAACGTTTGAATCGGCGGTGAAGT-CAGATATTA-TATGGGA 164
||||| | | ||||| ||||| |||||||| || || | || | ||| | |||||||
Sbjct 249 TGCTGCAT-CGGTTTCCAAAACCTTTGAATCAGCTGTTA-GTTCCGAT-TGCGTATGGGA 305
Query 165 GAAGTTTCTTCCGGCGGAGTATGAATCTCTGATTCCTCCATCGCGA-TCTTTCTCATCGA 223
||||||||||| |||||||||||||| || || ||| ||| ||| | ||| ||||||
Sbjct 306 CAAGTTTCTTCCACCGGAGTATGAATCTTTGGTTTCTCGATCTCGAGTTTTTG-CATCGA 364
Query 224 AGAAGGAACTCTATTTCTCTCTCTGTAACGATCCTGTTCTAATCGACGATGGCAAAAAGA 283
|||||||||| |||||| ||||||| || |||||||||||||||| |||||||||||||
Sbjct 365 AGAAGGAACTTTATTTCGCTCTCTGCCACAATCCTGTTCTAATCGAAGATGGCAAAAAGA 424
Query 284 GCATATGGTTAGAGAAAGCGAGTGGGAAGAGGTGTCTGATGATATCTGCGATG-AACCTC 342
|| | |||||||| ||||||||||| || |||||| | ||| ||||| | | | ||| |
Sbjct 425 GCTTTTGGTTAGAAAAAGCGAGTGGAAAAAGGTGTATCATGTTATCTTCAAAGGAACTT- 483
Query 343 TCAATCATATGGGGA-GATACTCCTCACTATTGGCAATGGATTCCAATTCCTGAATCTAG 401
| |||| ||||||| | || |||| | ||||||||||||||| ||||||||||||||||
Sbjct 484 TGGATCACATGGGGAAG-TAGTCCTGAATATTGGCAATGGATTTCAATTCCTGAATCTAG 542
Query 402 GTTTGA-AAAAGTAGC-GAAGCTTGTTGATGTATGTTGGTTCGAGATTCGTGGCA-GAAC 458
|| | |||| |||| || |||| ||||||| |||||||| ||||||||||||| || |
Sbjct 543 ATTCAACAAAA-TAGCAGA-GCTTCTTGATGTGTGTTGGTTTGAGATTCGTGGCAAGA-C 599
Query 459 GAAT-GCTCGTGT-CTTATCTCCAAGAACTCGTTACTCGGCTTATATTGTGTTCAAGA-- 514
|| |||||||| || |||||| ||||||||||||||||||| |||||||||||||
Sbjct 600 -AAGCGCTCGTGTGCT-ATCTCCTGGAACTCGTTACTCGGCTTACATTGTGTTCAAGACG 657
Query 515 AA-G-TGGAATGTTATGGCTTTCAGAATGTGGCAATAGAAGCTTC-AGTTGGAATGGTGG 571
|| | | || ||| ||| || | || || | |||||| || | |||| | ||||
Sbjct 658 AAAGATCGA-TGTCCTGGATTAGGGCATTTGCCGGTAGAAG-TTGGACTTGGTTTAGTGG 715
Query 572 GACAGGAACCTTCTAGAAGATTTATATGCTTTGATGAAG-CTATAAGGAGATACG--GGG 628
|||| ||| |||||| |||||| |||| ||| || | | | || || ||| || |||
Sbjct 716 GACAAGAATCTTCTAAAAGATTCATATA-TTTCAT-AGGGCC-TA-GG-GAT-CGAAGGG 769
Query 629 GAAGGAGG-AA-CTTT-G-TGAAACCTAAGGAGA-----GAGAAGATGGGTGGATGGA-G 678
|||||||| || | | || ||| || ||| ||||||||||||||||||| |
Sbjct 770 GAAGGAGGGAAACGAGAGATGTAACAAAACCAGATCAAAGAGAAGATGGGTGGATGGAAG 829
Query 679 ATAGAGCTTGGGGAATTCTTCATTGAAGGAGGAATAATGAATAGTGATGAAATTGAGATG 738
| |||||||| |||||||||| ||||| | || | | |||||||||||||| |
Sbjct 830 CT-GAGCTTGGTGAATTCTTCAATGAAG-A--AAG---G--T-GTGATGAAATTGAGTTT 879
Query 739 AGTGCT-TTAGAGACTAAG-CTGCT-CAATTGGAAGTGTGGCTTGATCATTCAAGGAATT 795
|||| | || |||| |||| | || | ||||||| |||| |||||||||||||||||
Sbjct 880 AGTGTTATT-GAGATTAAGTCCCCTTC--TTGGAAGAGTGGTTTGATCATTCAAGGAATC 936
Query 796 GAAATCCGCCCTGCCAAAA 814
||| |||||||| | ||||
Sbjct 937 GAATTCCGCCCTACGAAAA 955
> AT2G02320.1 | Symbols: AtPP2-B7, PP2-B7 | phloem protein 2-B7
| chr2:610428-611843 REVERSE LENGTH=1079
Length=1079
Score = 381 bits (206), Expect = 6e-105
Identities = 612/799 (77%), Gaps = 63/799 (8%)
Strand=Plus/Plus
Query 52 CCGGAGGAATGCATCTCCAACATAATCTCTTTCACAAATCCACGCGATGCGTGCG-TCGC 110
||||| ||||| |||||| ||||||||||||||||| ||| || || || || | | |
Sbjct 153 CCGGAAGAATGTATCTCCCTCATAATCTCTTTCACAAGTCCTCGAGACGCATGTGTTTTC 212
Query 111 TGCTACAGTTTCGAAAACGTTTGAATCGGCGGT-GAAGTCAGATATTA-TATGGGAGAAG 168
||| ||||| ||||| |||||||| || || || || |||| || | |||||||||
Sbjct 213 -GCTTTGGTTTCAAAAACCTTTGAATCTGCTGTCCAA-TCCGATA-TAGTGTGGGAGAAG 269
Query 169 TTTCTTCCGGCGGAGTATGAATCTCTGATT-CCTCCATCGCGATC-TTTCTCATCGAAGA 226
||| |||| | |||||||||||| || || ||| ||||| | | ||| ||||||||||
Sbjct 270 TTTATTCCACCAGAGTATGAATCTTTG-TTATCTCGATCGC-AACATTTTTCATCGAAGA 327
Query 227 AGGAACTCTATTTCTCTCTCTGTAACG-ATCCTGTTCTAATCGACGATGGCAAAAA-GAG 284
|||| |||| |||| |||| || ||| || ||||| ||||| ||| | ||||||| ||
Sbjct 328 AGGAGCTCTTTTTCGCTCTTTGCGACGAAT-CTGTTTTAATCAACGTTAGCAAAAAGGA- 385
Query 285 CATATGGTTAGAGAAA-GCGAGTGGGAAGAGGTGTCTGATGATATCTGCGATGAACCTCT 343
| | ||| |||| ||| |||| ||||||||||||| ||||| |||| || | | || |
Sbjct 386 CTTGTGGATAGA-AAAGGCGACTGGGAAGAGGTGTATGATGTTATCAGC--TTCAGCTTT 442
Query 344 CAATCATATGGGGAGATACTCCTCACTA-TTGGCAATGGATTCCAATTCCTG-A--ATCT 399
|| | | | |||| |||| | |||| |||||||| ||| |||| | | ||
Sbjct 443 GAA-CCT-T-----TCCACTCATCAC-ACTTGGAAATGGATTACAAACCCTGTATCAGCT 494
Query 400 AGGTTTGAAAAAGTAGCGA-AGCTTGTTGA-TGTATGTTGGTTCGAGATTCG-TGGCAGA 456
|||| |||| |||| | | ||||| | | | |||||||||||||||| | |||||
Sbjct 495 TGGTTGGAAACAGTA-CCAGAGCTT-CTCACAACACGTTGGTTCGAGATTCGAT-GCAGA 551
Query 457 ACGAATGCTCG-TGTCTTATCTCCAAGAACTCGTTACTCGGCTTATATTGTGTTCAAGAA 515
|||||| |||| | || |||| ||||||||||||||||||| ||| ||||||||| |||
Sbjct 552 ACGAATACTCGTTTTC-TATCACCAAGAACTCGTTACTCGGTTTACATTGTGTTCTTGAA 610
Query 516 AGTGG--A-ATGTTATGGCTTT-CAGAATGTGGCAATAGAAGCT-TCAGTTGGAATGGTG 570
|| || | ||||||||||||| | | ||||||| || |||||| | |||| ||||||||
Sbjct 611 AGCGGATATATGTTATGGCTTTGC-GTATGTGGCCATGGAAGCTGT-AGTTAGAATGGTG 668
Query 571 GGAC--------AG-GAACCTTCTAGAAGATTTATATGCTTTGATGAAGCTAT--A-AGG 618
|||| || ||| ||| |||||||| | |||||||| |||| ||||| | ||
Sbjct 669 GGACATGAATTAAGTGAATCTTGTAGAAGATATGTATGCTTTCATGAGGCTATGGAGTGG 728
Query 619 -AGATACGGGGGAAGGAGGAACTTTGTGAAACCTAAGGA-GAGAGAAGATGGGTGGATGG 676
|| | | ||||| |||| | ||||| || | || ||||||||||||||||||||
Sbjct 729 CAGTTTC-TTACAAGGAAGAACCTAGTGAATCCCGA-GAGGAGAGAAGATGGGTGGATGG 786
Query 677 AGATAGAGCTTGGGGAATTCTTCATTGAAGGAGGAATAATGAATAGTGATGAAATTGAGA 736
|||||||| ||||||||||||| | |||||||| | | | ||||| ||||||||||||||
Sbjct 787 AGATAGAGATTGGGGAATTCTTTAATGAAGGAGCATTTAGGAATAATGATGAAATTGAGA 846
Query 737 TGAGTGCTTT-AGAGACTAAGCTGCTCAATTGGAAGTGTGGCTTGATCATTCAAGGAATT 795
|||||| ||| |||||||| | || |||| ||| |||||||||| ||||||||||||
Sbjct 847 TGAGTG-TTTCAGAGACTACTCAGCGCAATACGAAACGTGGCTTGATTATTCAAGGAATT 905
Query 796 GAAATCCGCCCTGCCAAAA 814
|||||||| ||| | ||||
Sbjct 906 GAAATCCGTCCTACGAAAA 924
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40036615159
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5