BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg346781 Length=627 Score E Sequences producing significant alignments: (Bits) Value AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 835 0.0 AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 732 0.0 AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 695 0.0 AT2G16450.1 | Symbols: | F-box and associated interaction doma... 665 0.0 AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 342 2e-93 AT3G56890.1 | Symbols: | F-box associated ubiquitination effec... 117 1e-25 AT5G38810.1 | Symbols: | F-box and associated interaction doma... 76.8 2e-13 AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 69.4 4e-11 AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 63.9 2e-09 > AT2G02660.1 | Symbols: | F-box associated ubiquitination effector family protein | chr2:738504-739769 FORWARD LENGTH=1266 Length=1266 Score = 835 bits (452), Expect = 0.0 Identities = 571/628 (91%), Gaps = 10/628 (2%) Strand=Plus/Plus Query 4 TGCATCAATGGGGTTTTGTATTTCTTAGCTGAGAGAGCTGAAATATCGTTTGATTATGTG 63 |||||||||||||||||||||||||||||||||||| ||| || || |||||||||| Sbjct 604 TGCATCAATGGGGTTTTGTATTTCTTAGCTGAGAGAAATGAGCTAGAGTCTGATTATGTG 663 Query 64 ATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTTTATTGACGTAGAAAGGTTTTGT 123 |||||||||||||||||| ||||||||| |||||| | |||||||||||| ||| ||||| Sbjct 664 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATATTGACGTAGAGAGGATTTGT 723 Query 124 CGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGACATT 183 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 724 CGATTGATAAACTACAAGGGCAAATTAGCTATGATTTATTGGGAGGATGATGTCGACATT 783 Query 184 TATGAGATTTGTTATTATGG-T--AAAG-ATCTCGATGAGTATTTGGAGGAAAATCTCGA 239 ||||||||| | | ||||| | ||| |||| ||| |||||||||||||||||||||| Sbjct 784 TATGAGATTAATCA-TATGGCTGGGAAGAATCTTGATAAGTATTTGGAGGAAAATCTCGA 842 Query 240 CGCTGATGCCACTAACGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGAAATG 299 | |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 843 TGTTGATGCCACTAATGAGTTGCATGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATG 902 Query 300 GTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCTATCGC 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 903 GTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATTGC 962 Query 360 TGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATACACCTAAACAACC 419 ||||||||||| ||||||||||||||||||||| || |||||||| ||| |||||||||| Sbjct 963 TGGAGCCACTGTTTCGGGTGAAATAGTGTTTTCGATACGCAAGTACACATCTAAACAACC 1022 Query 420 GTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCAAGG 479 |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| Sbjct 1023 GTTTTATGTTTTCTACTTCAATCCCGAATCGAACACTCTCCAACGTGTAGAAACCCAAGG 1082 Query 480 TTTTGGTGAAGCGTTTAAG--A-AAACTTGTAGCGTTTGCACCTTTGTAAACCACGTAGA 536 |||||||||||| |||||| | |||||||||||||| |||||||||||||||||||||| Sbjct 1083 TTTTGGTGAAGCATTTAAGGCAGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGA 1142 Query 537 GGATCTTGATGTTAACGATTTAAAGCAACTCAAGTCAGTCCATCCTCCTTTGGTGCAGCC 596 | |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct 1143 GAATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGGCCATCCTCCATTGGTGCAGCC 1202 Query 597 AGAATATTAT-GAATCATCAGATTCAGA 623 |||| ||||| | | |||||| ||||| Sbjct 1203 AGAAAATTATTGTCT-ATCAGACTCAGA 1229 > AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616 REVERSE LENGTH=1596 Length=1596 Score = 732 bits (396), Expect = 0.0 Identities = 480/520 (92%), Gaps = 8/520 (2%) Strand=Plus/Plus Query 54 TGATTATGTGATAGTTTGCTTTGATGT-TCGGTCTGAGACATTCACCTTTATTGACGTAG 112 ||| ||||||||||||||||||||||| | |||||||| |||||||||| ||| |||| Sbjct 1059 TGAGTATGTGATAGTTTGCTTTGATGTGAC-GTCTGAGAAATTCACCTTTGTTGGCGTAC 1117 Query 113 AAAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATG 172 ||| |||||||| ||||||||||||||||||||| |||| |||||| ||||||||||||| Sbjct 1118 AAAAGTTTTGTCTATTGATCAACTACAAGGGCAAGTTAGATGTGATCTATTGGGAGGATG 1177 Query 173 ATGTCGACATTTATGAGATTTGTTA-TTATG-GTAAAGATCTCGATGAGTATTTGGAGGA 230 ||||||||||| ||||||||||||| || || | || |||||||||||||||||||| || Sbjct 1178 ATGTCGACATTCATGAGATTTGTTACTT-TGCG-AAGGATCTCGATGAGTATTTGGACGA 1235 Query 231 AAATCTCGACGCTGATGCCACTAACGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAA 290 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct 1236 AAATCTTGACGCTGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGAA 1295 Query 291 ACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCT 350 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1296 ACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCACCT 1355 Query 351 TTCTATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATACACC 410 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| | Sbjct 1356 TTCCATTGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACATC 1415 Query 411 TAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGA 470 ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 1416 TAAACAACCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTGA 1475 Query 471 AATCCAAGGTTTTGGTGAAGCGTTTAAGAAAACTTGTAGCGTTTGCACCTTTGTAAACCA 530 |||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||| Sbjct 1476 AATCCAAGGTTTTGGTGAAGCGTTTAGGACAACTTGTAGTGTTCGCACCTTTGTAAACCA 1535 Query 531 CGTAGAGGATCTTGATGTTAACGATTTA-AAGCAACTCAA 569 | |||||||||||||||||||||||||| || |||||||| Sbjct 1536 CATAGAGGATCTTGATGTTAACGATTTAGAA-CAACTCAA 1574 > AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205 REVERSE LENGTH=1414 Length=1414 Score = 695 bits (376), Expect = 0.0 Identities = 486/539 (90%), Gaps = 8/539 (1%) Strand=Plus/Plus Query 54 TGATTATGTGATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTTTATTGACGTAGA 113 ||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||||| Sbjct 856 TGATTATGTGATAGTTTGCTTTGATATTAGGTCTGAGAAATTCACGTTTATTGACGTAGA 915 Query 114 AAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGA 173 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 916 AAGGTTTTGTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGA 975 Query 174 TGTCGACATTTATGAGATTTGTTATTATGGTAAAGATCTCGATGAGTATTTGGAGGAAAA 233 ||||||||||||| || ||| ||||| || | | || || || ||| ||||| | || Sbjct 976 TGTCGACATTTATAAGCTTTATTATTC-GG-AT-G-TC--GACGAATATGTGGAGTATAA 1029 Query 234 TCTCGACGCTGATGCCACTAACGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACA 293 | | ||| ||||| || ||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1030 TATTAACGATGATGACATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACA 1089 Query 294 GAAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTC 353 | ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1090 GCAATGGTCGAAATATGCCTACACTTGGACCGATGATAGATTCTTCCGTCGTCGTGTTTC 1149 Query 354 TATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATACACCTAA 413 |||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct 1150 CATCGCTGGAGGGACTGCTTCGGGTGAAATAGTGTTTTCGATGCTCAAATATACACCTAA 1209 Query 414 ACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAAT 473 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1210 GCAACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAAT 1269 Query 474 CCAAGGTTTTGGTGAAGCGTTTAAGAAAACTTGTAGCGTTTGCACCTTTGTAAACCACGT 533 ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1270 CCAAGGTTTTGGTGAAGTGTTAAAGAAAACTTGTAGAGTTTGCACCTTTGTAAACCACGT 1329 Query 534 AGAGGATCTTGATGTTAACGA-TTTAAAGCAACTCAAGTCAGTCCATCCTCCTTTGGTG 591 |||||||||| ||||| |||| |||||| |||||||||||||||||||| || |||||| Sbjct 1330 AGAGGATCTTAATGTTCACGACTTTAAA-CAACTCAAGTCAGTCCATCCCCCATTGGTG 1387 > AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing protein | chr2:7131520-7132803 REVERSE LENGTH=1284 Length=1284 Score = 665 bits (360), Expect = 0.0 Identities = 505/573 (88%), Gaps = 17/573 (3%) Strand=Plus/Plus Query 50 CGTTTGATTATGTGATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTTTATTGACG 109 ||| || |||| |||||||||||||||||||| ||||||| | ||||||||||||||||| Sbjct 713 CGTCTGGTTATATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACCTTTATTGACG 772 Query 110 TAGAAAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGG 169 || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 773 TAAAAAGGTTTTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGG 832 Query 170 ATGATGTCGACATTTATGAGATTTGTTATTAT--GG-TAAAGATCTCGATGAGTATTTGG 226 |||||||||||||| | ||| ||| ||| | || || |||| |||| || ||| ||| Sbjct 833 ATGATGTCGACATTCAAGAGCTTTATTACAAAAAGGGTATAGATGTCGAGGAATATGTGG 892 Query 227 AGGAA-AATCTCGACGCTGATGCCACTAACGAGTTGCGTGTGTGGGTTCTAGAGGATGTT 285 || || ||| || |||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct 893 AG-AATAATGTCAACGCTGATGCCACTAATGAGTTGTGTGTGTGGATTCTAGCGGATGTT 951 Query 286 GAGAAACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATACA-TTCTTCCGTCG 344 ||||||||| ||||||| ||| |||||||||||||||||||||| | | ||||||||||| Sbjct 952 GAGAAACAGGAATGGTCGAAACATGCCTACACTTGGACCGATGAAA-AGTTCTTCCGTCG 1010 Query 345 TCACCTTTCTATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTA 404 | | || |||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 1011 TTTGGTATCCATCGCTGGAGTGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTG 1070 Query 405 TACA-CCTAAACAACCGTTTTATGT-TTTCTACTTCAATCCCGAAAAGAACACTCTCCAA 462 || | |||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||| Sbjct 1071 TA-ATCCTAAACAACCGTTTTATGTGTTT-TACTTCAATCCCGAAAGGAACAGTCTCCAA 1128 Query 463 CGTGTTGAAATCCAAGGTTTTGGTGAAGC-GTTTAAGAAAACTTGT-AGCGTTTGCACCT 520 ||||||||||| ||||||||||||||||| ||| | |||| ||||| | ||||||||||| Sbjct 1129 CGTGTTGAAATTCAAGGTTTTGGTGAAGCCGTT-ACGAAATCTTGTGA-CGTTTGCACCT 1186 Query 521 TTGTAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAGCAACTCAAGTCAGTCCATC 580 |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| Sbjct 1187 TTGTAAACCACGTAGAGGATCTCAATGTTTACGATTTAAAACAACTCAAGTCAGTCCATC 1246 Query 581 CTCCTTTGGT-GCAGCCAGAATATTATGAATCA 612 |||| ||||| | |||||||||||||||| ||| Sbjct 1247 CTCCATTGGTCG-AGCCAGAATATTATGATTCA 1278 > AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744 FORWARD LENGTH=1275 Length=1275 Score = 342 bits (185), Expect = 2e-93 Identities = 446/564 (79%), Gaps = 50/564 (9%) Strand=Plus/Plus Query 54 TGATTATGTGATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTTTATTGACG-TAG 112 |||||||| |||||||||||||||| || ||||||| | ||||| ||| |||| | ||| Sbjct 696 TGATTATGCGATAGTTTGCTTTGATATTAGGTCTGAAAAATTCATTTTTTTTGA-GATAG 754 Query 113 AAAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATG 172 ||||||||||| ||||||| ||||| ||||| |||||||| || ||||||| ||||||| Sbjct 755 AAAGGTTTTGTAGATTGATAAACTATAAGGGTAAATTAGCGGTAATTTATTTCGAGGATG 814 Query 173 ATGTCGACATTTATGAGAT-TTGT-TATTATGGTAAAGATCTCGATGAGTATTTGGAGGA 230 ||||| | | ||| | || ||| | |||| || |||| | || | || | | Sbjct 815 ATGTC-A-A-CTATCA-ATCGTGTCT-TTATCGT-AAGA-----A-GA--A-TT--ATGT 857 Query 231 AAATCTCGACGCTGATGCCACTAACGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAA 290 | | || ||||||||| ||| ||||| ||||||||||||||||||||| ||||| Sbjct 858 AGA-----AC-CTGATGCCATTAATAAGTTGAATGTGTGGGTTCTAGAGGATGTAGAGAA 911 Query 291 ACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTC-TTC--CGTCGTCA 347 |||| |||||| |||||||||||||||||||||||||||| |||| ||| |||||| | Sbjct 912 ACAGGAATGGTAGAAATATGCCTACACTTGGACCGATGATATATTCTTTCGTCGTCGTGA 971 Query 348 CCTTTCTATCGCT-GGA-G-CCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTA 404 |||| | ||| | | | |||||| |||||| ||||| ||||| ||| | |||| Sbjct 972 GGTTTCCGTTGCTCCAACGACTGCTGCTTGGGGTGACATAGTCTTTTCGATGTGTGAGTA 1031 Query 405 TACACCTAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACG 464 ||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1032 TACTCCTGGACAACCATTTTATGTTTTCTACTTCAATCCCGAAAAGAGCACTCTCCAACG 1091 Query 465 TGTTGAAATCCAAGGTTTTGGTGAAG-CGTTTAAGAAAACTTGTAGCGTTTGCACCTTTG 523 |||||||||||||||||||||||||| ||||| | | ||||||| |||||||| Sbjct 1092 TGTTGAAATCCAAGGTTTTGGTGAAGGCGTTT--G-----T---AGCGTTTACACCTTTG 1141 Query 524 TAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAGCA-ACTCAAGTCAGTCCA-TCC 581 || || ||||||| |||||| ||||||| |||||||| | ||||||| || |||| | | Sbjct 1142 TAGACGACGTAGAAGATCTTAATGTTAAGGATTTAAAA-ATACTCAAGCCA-TCCAATGC 1199 Query 582 TCC-TTTGGTGCAGCCAGAATATT 604 ||| |||| | || ||||| ||| Sbjct 1200 TCCATTTGA-GAAGACAGAAGATT 1222 > AT3G56890.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:21062990-21063717 REVERSE LENGTH=660 Length=660 Score = 117 bits (63), Expect = 1e-25 Identities = 186/241 (77%), Gaps = 25/241 (10%) Strand=Plus/Plus Query 256 GAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGAAATGG-TCTAAATATGCCTA 314 |||||| || ||||||||||||||||||||||||||||| ||||| || || |||| ||| Sbjct 262 GAGTTGTGTTTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGGTC-AAGTATGTCTA 320 Query 315 CACTTGGACCG-ATGA-T-ACATTC-TTCCGT-CGT-C-ACCTTTCTA-TCGCTGGAGCC 366 ||||| |||| | || | | | || || || | | | | |||| | | ||||||| Sbjct 321 CACTTT-ACCGGA-GAATGA-AGTCCTTG-GTTCCTGCGAGTTTTC-AGTTGCTGGAGTG 375 Query 367 ACTGCTTCG-GGTGAAATAGTGTTT-TCCATGCGCAAGTATACACCTAAACAACCGTTTT 424 ||||| | || || || || ||| | ||| ||||||||| ||||| | || | Sbjct 376 ACTGCAA-GAGGCGATATTGT-TTTGTGTATG---AAGTATACATGTAAAC--C-GTACT 427 Query 425 ATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTG 484 |||| ||||||||| ||||||||||||| || |||||| ||||||||||||||||||||| Sbjct 428 ATGTATTCTACTTCGATCCCGAAAAGAAAACCCTCCAAAGTGTTGAAATCCAAGGTTTTG 487 Query 485 G 485 | Sbjct 488 G 488 > AT5G38810.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:15540484-15541540 REVERSE LENGTH=780 Length=780 Score = 76.8 bits (41), Expect = 2e-13 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 256 GAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGAAATGGTC 302 |||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 583 GAGTTGTGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTC 629 > AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | chr1:11026338-11026784 REVERSE LENGTH=447 Length=447 Score = 69.4 bits (37), Expect = 4e-11 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 416 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 452 ||||||||||||||||||||||||||||||||||||| Sbjct 392 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428 > AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972 REVERSE LENGTH=921 Length=921 Score = 63.9 bits (34), Expect = 2e-09 Identities = 38/40 (95%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 450 GAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAA 489 ||||||| |||||||||||||||||||||||||||| ||| Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAA 624 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30240956494 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5